Metagenome / Metatranscriptome Family F033085

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F033085
Family Type	Metagenome / Metatranscriptome
Number of Sequences	178
Average Sequence Length	42 residues
Representative Sequence	YHKDKFRIDKDGYVLAPTEPGLGYPIDRDALDKIMKRIDR
Number of Associated Samples	137
Number of Associated Scaffolds	178

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.56 %
% of genes near scaffold ends (potentially truncated)	98.31 %
% of genes from short scaffolds (< 2000 bps)	89.33 %
Associated GOLD sequencing projects	131
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.21

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.067 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog (19.663 % of family members)
Environment Ontology (ENVO)	Unclassified (48.315 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (37.079 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 10.29% β-sheet: 2.94% Coil/Unstructured: 86.76%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.21
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.21
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 178 Family Scaffolds
PF00701	DHDPS	12.36
PF04199	Cyclase	6.74
PF07690	MFS_1	3.37
PF13378	MR_MLE_C	3.37
PF01435	Peptidase_M48	2.25
PF00801	PKD	2.25
PF13442	Cytochrome_CBB3	2.25
PF01557	FAA_hydrolase	1.69
PF03485	Arg_tRNA_synt_N	1.12
PF07883	Cupin_2	1.12
PF13620	CarboxypepD_reg	1.12
PF04542	Sigma70_r2	1.12
PF13561	adh_short_C2	1.12
PF10518	TAT_signal	0.56
PF13231	PMT_2	0.56
PF09339	HTH_IclR	0.56
PF02746	MR_MLE_N	0.56
PF07638	Sigma70_ECF	0.56
PF07676	PD40	0.56
PF01261	AP_endonuc_2	0.56
PF04909	Amidohydro_2	0.56
PF04015	DUF362	0.56
PF02449	Glyco_hydro_42	0.56
PF03328	HpcH_HpaI	0.56
PF01408	GFO_IDH_MocA	0.56
PF14559	TPR_19	0.56
PF07944	Glyco_hydro_127	0.56
PF14509	GH97_C	0.56
PF02837	Glyco_hydro_2_N	0.56
PF16757	Fucosidase_C	0.56
PF13432	TPR_16	0.56
PF01614	IclR	0.56
PF13470	PIN_3	0.56

COG ID	Name	Functional Category	% Frequency in 178 Family Scaffolds
COG0329	4-hydroxy-tetrahydrodipicolinate synthase/N-acetylneuraminate lyase	Cell wall/membrane/envelope biogenesis [M]	24.72
COG1878	Kynurenine formamidase	Amino acid transport and metabolism [E]	6.74
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	1.69
COG0018	Arginyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	1.12
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	1.12
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	1.12
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	1.12
COG4948	L-alanine-DL-glutamate epimerase or related enzyme of enolase superfamily	Cell wall/membrane/envelope biogenesis [M]	1.12
COG0469	Pyruvate kinase	Carbohydrate transport and metabolism [G]	0.56
COG1414	DNA-binding transcriptional regulator, IclR family	Transcription [K]	0.56
COG1874	Beta-galactosidase GanA	Carbohydrate transport and metabolism [G]	0.56
COG2006	Uncharacterized conserved protein, DUF362 family	Function unknown [S]	0.56
COG2301	Citrate lyase beta subunit	Carbohydrate transport and metabolism [G]	0.56
COG3250	Beta-galactosidase/beta-glucuronidase	Carbohydrate transport and metabolism [G]	0.56
COG3533	Beta-L-arabinofuranosidase, GH127 family	Carbohydrate transport and metabolism [G]	0.56
COG3836	2-keto-3-deoxy-L-rhamnonate aldolase RhmA	Carbohydrate transport and metabolism [G]	0.56

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.07 %
Unclassified	root	N/A	3.93 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.07 %
Unclassified	root	N/A	3.93 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.07 %
Unclassified	root	N/A	3.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	31.46 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.06 %
Unclassified	root	N/A	3.93 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.69 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	17.98 %
Unclassified	root	N/A	3.93 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.69 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.69 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.56 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	3.93 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	2.81 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.25 %
Opitutae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	1.69 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.69 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.56 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	3.93 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.25 %
Opitutales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales	1.69 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	1.69 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.69 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	0.56 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	3.93 %
Opitutaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae	1.69 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.69 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	1.12 %
unclassified Bryobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae	0.56 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.56 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.56 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.56 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	3.93 %
Opitutus	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Opitutus	1.69 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.69 %
unclassified Candidatus Sulfopaludibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter	0.56 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	0.56 %
Edaphobacter acidisoli	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter acidisoli	0.56 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.56 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.56 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	3.93 %
unclassified Opitutus	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Opitutus → unclassified Opitutus	1.69 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.69 %
Candidatus Sulfopaludibacter sp. SbA3	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	0.56 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	0.56 %
Edaphobacter acidisoli	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter acidisoli	0.56 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.56 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.56 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	3.93 %
Opitutus sp. ER46	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Opitutus → unclassified Opitutus → Opitutus sp. ER46	1.69 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.69 %
Candidatus Sulfopaludibacter sp. SbA3	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	0.56 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	0.56 %
Edaphobacter acidisoli	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter acidisoli	0.56 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.56 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.56 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.56 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005356\|Ga0070674_101957069	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300005364\|Ga0070673_101660997	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300005364\|Ga0070673_101967081	All Organisms → cellular organisms → Bacteria → Acidobacteria	555	Open in IMG/M
3300005466\|Ga0070685_10932767	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300005614\|Ga0068856_101553724	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300006050\|Ga0075028_100475278	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	726	Open in IMG/M
3300006237\|Ga0097621_101433120	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	654	Open in IMG/M
3300006638\|Ga0075522_10202074	All Organisms → cellular organisms → Bacteria	1003	Open in IMG/M
3300006795\|Ga0075520_1116788	All Organisms → cellular organisms → Bacteria	1194	Open in IMG/M
3300006950\|Ga0075524_10103645	All Organisms → cellular organisms → Bacteria	1217	Open in IMG/M
3300009177\|Ga0105248_12145740	Not Available	635	Open in IMG/M
3300009551\|Ga0105238_11697788	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300009629\|Ga0116119_1079961	Not Available	827	Open in IMG/M
3300009633\|Ga0116129_1130121	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	720	Open in IMG/M
3300009636\|Ga0116112_1054816	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1172	Open in IMG/M
3300009665\|Ga0116135_1042377	All Organisms → cellular organisms → Bacteria → Proteobacteria	1572	Open in IMG/M
3300009672\|Ga0116215_1520065	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300009764\|Ga0116134_1261593	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	596	Open in IMG/M
3300010379\|Ga0136449_101312119	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1127	Open in IMG/M
3300010399\|Ga0134127_11003598	All Organisms → cellular organisms → Bacteria	895	Open in IMG/M
3300013105\|Ga0157369_11918752	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300014151\|Ga0181539_1118236	All Organisms → cellular organisms → Bacteria	1091	Open in IMG/M
3300014152\|Ga0181533_1101690	All Organisms → cellular organisms → Bacteria → Acidobacteria	1278	Open in IMG/M
3300014152\|Ga0181533_1284416	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	605	Open in IMG/M
3300014156\|Ga0181518_10425266	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300014156\|Ga0181518_10455775	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300014158\|Ga0181521_10098008	All Organisms → cellular organisms → Bacteria	1808	Open in IMG/M
3300014158\|Ga0181521_10371133	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Opitutus → unclassified Opitutus → Opitutus sp. ER46	712	Open in IMG/M
3300014158\|Ga0181521_10539361	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300014159\|Ga0181530_10431166	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300014160\|Ga0181517_10081925	All Organisms → cellular organisms → Bacteria	1910	Open in IMG/M
3300014161\|Ga0181529_10104979	All Organisms → cellular organisms → Bacteria → Acidobacteria	1796	Open in IMG/M
3300014162\|Ga0181538_10072864	All Organisms → cellular organisms → Bacteria → Acidobacteria	2077	Open in IMG/M
3300014162\|Ga0181538_10301821	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	870	Open in IMG/M
3300014164\|Ga0181532_10260568	All Organisms → cellular organisms → Bacteria	993	Open in IMG/M
3300014165\|Ga0181523_10740343	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300014168\|Ga0181534_10156303	All Organisms → cellular organisms → Bacteria	1171	Open in IMG/M
3300014168\|Ga0181534_10864891	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	538	Open in IMG/M
3300014169\|Ga0181531_10830198	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300014199\|Ga0181535_10336226	All Organisms → cellular organisms → Bacteria → Acidobacteria	894	Open in IMG/M
3300014199\|Ga0181535_10555829	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300014200\|Ga0181526_10797308	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	595	Open in IMG/M
3300014200\|Ga0181526_10847805	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300014201\|Ga0181537_11035070	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300014201\|Ga0181537_11219897	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	508	Open in IMG/M
3300014492\|Ga0182013_10261752	All Organisms → cellular organisms → Bacteria	993	Open in IMG/M
3300014494\|Ga0182017_10164789	All Organisms → cellular organisms → Bacteria	1430	Open in IMG/M
3300014496\|Ga0182011_10465564	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300014496\|Ga0182011_10875940	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter acidisoli	560	Open in IMG/M
3300014496\|Ga0182011_10929042	All Organisms → cellular organisms → Bacteria → Acidobacteria	541	Open in IMG/M
3300014498\|Ga0182019_10560374	All Organisms → cellular organisms → Bacteria	798	Open in IMG/M
3300014498\|Ga0182019_11258722	All Organisms → cellular organisms → Bacteria → Acidobacteria	545	Open in IMG/M
3300014499\|Ga0182012_10377161	All Organisms → cellular organisms → Bacteria	940	Open in IMG/M
3300014501\|Ga0182024_10793393	All Organisms → cellular organisms → Bacteria → Acidobacteria	1155	Open in IMG/M
3300014501\|Ga0182024_11431248	All Organisms → cellular organisms → Bacteria	793	Open in IMG/M
3300014502\|Ga0182021_11963812	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300014502\|Ga0182021_12466815	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300014638\|Ga0181536_10239169	All Organisms → cellular organisms → Bacteria	877	Open in IMG/M
3300014638\|Ga0181536_10364509	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	654	Open in IMG/M
3300014638\|Ga0181536_10383062	All Organisms → cellular organisms → Bacteria → Acidobacteria	633	Open in IMG/M
3300014655\|Ga0181516_10145306	All Organisms → cellular organisms → Bacteria	1201	Open in IMG/M
3300014657\|Ga0181522_10164858	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	1298	Open in IMG/M
3300014657\|Ga0181522_10663045	All Organisms → cellular organisms → Bacteria → Acidobacteria	635	Open in IMG/M
3300014658\|Ga0181519_10251290	All Organisms → cellular organisms → Bacteria → Acidobacteria	1104	Open in IMG/M
3300014658\|Ga0181519_10888614	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300014838\|Ga0182030_11583235	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300014838\|Ga0182030_11624683	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	528	Open in IMG/M
3300014839\|Ga0182027_10035403	All Organisms → cellular organisms → Bacteria → Acidobacteria	6432	Open in IMG/M
3300014839\|Ga0182027_10174969	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2509	Open in IMG/M
3300014839\|Ga0182027_10369601	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1602	Open in IMG/M
3300014839\|Ga0182027_11472873	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	671	Open in IMG/M
3300014839\|Ga0182027_11657963	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300014839\|Ga0182027_11726683	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300014839\|Ga0182027_11899631	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300015374\|Ga0132255_102166945	All Organisms → cellular organisms → Bacteria → Acidobacteria	847	Open in IMG/M
3300016700\|Ga0181513_1387270	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	708	Open in IMG/M
3300016728\|Ga0181500_1370913	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300016730\|Ga0181515_1161274	All Organisms → cellular organisms → Bacteria	1748	Open in IMG/M
3300017929\|Ga0187849_1273214	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300017935\|Ga0187848_10258759	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Opitutus → unclassified Opitutus → Opitutus sp. ER46	733	Open in IMG/M
3300017938\|Ga0187854_10040744	All Organisms → cellular organisms → Bacteria	2377	Open in IMG/M
3300017946\|Ga0187879_10317022	All Organisms → cellular organisms → Bacteria	865	Open in IMG/M
3300017988\|Ga0181520_10424077	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	959	Open in IMG/M
3300017988\|Ga0181520_10871488	All Organisms → cellular organisms → Bacteria → Acidobacteria	603	Open in IMG/M
3300017988\|Ga0181520_10975051	Not Available	562	Open in IMG/M
3300018008\|Ga0187888_1005838	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	8415	Open in IMG/M
3300018017\|Ga0187872_10115887	All Organisms → cellular organisms → Bacteria	1321	Open in IMG/M
3300018017\|Ga0187872_10499083	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300018033\|Ga0187867_10673494	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	564	Open in IMG/M
3300018038\|Ga0187855_10557482	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	667	Open in IMG/M
3300018042\|Ga0187871_10159984	All Organisms → cellular organisms → Bacteria	1270	Open in IMG/M
3300018042\|Ga0187871_10268232	All Organisms → cellular organisms → Bacteria	946	Open in IMG/M
3300018043\|Ga0187887_10350277	All Organisms → cellular organisms → Bacteria → Acidobacteria	871	Open in IMG/M
3300018043\|Ga0187887_10615835	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300018043\|Ga0187887_10850224	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300018044\|Ga0187890_10574464	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300018044\|Ga0187890_10792638	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300019270\|Ga0181512_1381553	Not Available	525	Open in IMG/M
3300019787\|Ga0182031_1369455	All Organisms → cellular organisms → Bacteria	1353	Open in IMG/M
3300019788\|Ga0182028_1299133	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1167	Open in IMG/M
3300019788\|Ga0182028_1320823	All Organisms → cellular organisms → Bacteria	2738	Open in IMG/M
3300022516\|Ga0224542_1043982	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300022520\|Ga0224538_1030324	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300022593\|Ga0236338_1121134	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	536	Open in IMG/M
3300023091\|Ga0224559_1091946	All Organisms → cellular organisms → Bacteria	1133	Open in IMG/M
3300025453\|Ga0208455_1013376	All Organisms → cellular organisms → Bacteria	2032	Open in IMG/M
3300025506\|Ga0208937_1093349	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300025507\|Ga0208188_1023937	All Organisms → cellular organisms → Bacteria → Proteobacteria	1742	Open in IMG/M
3300025891\|Ga0209585_10244661	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	710	Open in IMG/M
3300025924\|Ga0207694_10977701	All Organisms → cellular organisms → Bacteria	716	Open in IMG/M
3300025960\|Ga0207651_11147306	All Organisms → cellular organisms → Bacteria → Acidobacteria	697	Open in IMG/M
3300026456\|Ga0255351_1026997	All Organisms → cellular organisms → Bacteria	1366	Open in IMG/M
3300027570\|Ga0208043_1019813	All Organisms → cellular organisms → Bacteria	2145	Open in IMG/M
3300027662\|Ga0208565_1229584	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300027898\|Ga0209067_10482962	All Organisms → cellular organisms → Bacteria → Acidobacteria	702	Open in IMG/M
3300028558\|Ga0265326_10017347	All Organisms → cellular organisms → Bacteria → Proteobacteria	2078	Open in IMG/M
3300028562\|Ga0302151_10207775	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300028565\|Ga0302145_10087851	All Organisms → cellular organisms → Bacteria → Proteobacteria	1064	Open in IMG/M
3300028666\|Ga0265336_10170257	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	648	Open in IMG/M
3300028731\|Ga0302301_1143093	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300028747\|Ga0302219_10082804	All Organisms → cellular organisms → Bacteria	1205	Open in IMG/M
3300028748\|Ga0302156_10008871	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6624	Open in IMG/M
3300028748\|Ga0302156_10186857	All Organisms → cellular organisms → Bacteria → Acidobacteria	982	Open in IMG/M
3300028762\|Ga0302202_10341360	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Opitutus → unclassified Opitutus → Opitutus sp. ER46	710	Open in IMG/M
3300028779\|Ga0302266_10312296	Not Available	573	Open in IMG/M
3300028783\|Ga0302279_10264500	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300028798\|Ga0302222_10108389	All Organisms → cellular organisms → Bacteria	1104	Open in IMG/M
3300028813\|Ga0302157_10036059	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3715	Open in IMG/M
3300028882\|Ga0302154_10154134	All Organisms → cellular organisms → Bacteria	1196	Open in IMG/M
3300028906\|Ga0308309_11346738	Not Available	613	Open in IMG/M
3300029817\|Ga0247275_1135493	All Organisms → cellular organisms → Bacteria	629	Open in IMG/M
3300029882\|Ga0311368_10689330	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300029883\|Ga0311327_10001070	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	23249	Open in IMG/M
3300029910\|Ga0311369_10859387	All Organisms → cellular organisms → Bacteria	728	Open in IMG/M
3300029910\|Ga0311369_11186246	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300029914\|Ga0311359_10418742	All Organisms → cellular organisms → Bacteria	1050	Open in IMG/M
3300029916\|Ga0302148_1005717	All Organisms → cellular organisms → Bacteria	3754	Open in IMG/M
3300029917\|Ga0311326_10155370	All Organisms → cellular organisms → Bacteria	1226	Open in IMG/M
3300029917\|Ga0311326_10434947	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300029920\|Ga0302142_1121583	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M
3300029951\|Ga0311371_10110968	All Organisms → cellular organisms → Bacteria	4328	Open in IMG/M
3300029952\|Ga0311346_11350267	All Organisms → cellular organisms → Bacteria → Acidobacteria	543	Open in IMG/M
3300029955\|Ga0311342_10115504	All Organisms → cellular organisms → Bacteria	2800	Open in IMG/M
3300029985\|Ga0302280_1173121	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300029993\|Ga0302304_10355606	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300030020\|Ga0311344_10393255	All Organisms → cellular organisms → Bacteria → Acidobacteria	1278	Open in IMG/M
3300030225\|Ga0302196_10054361	All Organisms → cellular organisms → Bacteria	2592	Open in IMG/M
3300030294\|Ga0311349_12231051	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300030399\|Ga0311353_11060044	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	676	Open in IMG/M
3300030524\|Ga0311357_10367656	All Organisms → cellular organisms → Bacteria	1364	Open in IMG/M
3300030580\|Ga0311355_10010465	All Organisms → cellular organisms → Bacteria	12009	Open in IMG/M
3300030617\|Ga0311356_10860687	All Organisms → cellular organisms → Bacteria	856	Open in IMG/M
3300030618\|Ga0311354_10743901	All Organisms → cellular organisms → Bacteria	933	Open in IMG/M
3300030688\|Ga0311345_10821568	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300030688\|Ga0311345_11205236	Not Available	550	Open in IMG/M
3300030906\|Ga0302314_11129313	All Organisms → cellular organisms → Bacteria	742	Open in IMG/M
3300031232\|Ga0302323_102063136	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	648	Open in IMG/M
3300031234\|Ga0302325_11045069	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1109	Open in IMG/M
3300031234\|Ga0302325_12452041	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	624	Open in IMG/M
3300031242\|Ga0265329_10347766	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	507	Open in IMG/M
3300031249\|Ga0265339_10329479	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300031249\|Ga0265339_10480337	All Organisms → cellular organisms → Bacteria → Acidobacteria	575	Open in IMG/M
3300031344\|Ga0265316_10073452	All Organisms → cellular organisms → Bacteria	2634	Open in IMG/M
3300031524\|Ga0302320_10559979	All Organisms → cellular organisms → Bacteria	1355	Open in IMG/M
3300031524\|Ga0302320_11943702	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	554	Open in IMG/M
3300031711\|Ga0265314_10393934	All Organisms → cellular organisms → Bacteria → Proteobacteria	750	Open in IMG/M
3300031788\|Ga0302319_10655007	All Organisms → cellular organisms → Bacteria	1077	Open in IMG/M
3300031902\|Ga0302322_101518986	All Organisms → cellular organisms → Bacteria	818	Open in IMG/M
3300031938\|Ga0308175_103029023	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300031939\|Ga0308174_11946500	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300032675\|Ga0316225_1050383	All Organisms → cellular organisms → Bacteria	1558	Open in IMG/M
3300032676\|Ga0316229_1017619	All Organisms → cellular organisms → Bacteria	3807	Open in IMG/M
3300032829\|Ga0335070_10468418	All Organisms → cellular organisms → Bacteria	1197	Open in IMG/M
3300033004\|Ga0335084_11013863	All Organisms → cellular organisms → Bacteria	836	Open in IMG/M
3300033402\|Ga0326728_10562235	All Organisms → cellular organisms → Bacteria → Acidobacteria	903	Open in IMG/M
3300033890\|Ga0334810_143808	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	575	Open in IMG/M
3300034091\|Ga0326724_0420920	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300034282\|Ga0370492_0101173	All Organisms → cellular organisms → Bacteria → Acidobacteria	1179	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.89%
Host-Associated	Host-Associated	10.11%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	51.69%
Aquatic	Environmental → Aquatic	38.20%
Plants	Host-Associated → Plants	10.11%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	37.08%
Peat	Environmental → Terrestrial → Peat	28.65%
Soil	Environmental → Terrestrial → Soil	23.03%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.43%
Sediment	Environmental → Aquatic → Sediment	1.12%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.12%
Roots	Host-Associated → Plants → Roots	0.56%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	35.39%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	28.65%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	15.17%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	6.74%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.18%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.25%
Lentic	Environmental → Aquatic → Freshwater → Lentic	1.12%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.12%
Loam	Environmental → Terrestrial → Soil → Loam	1.12%
Lake	Environmental → Aquatic → Freshwater → Lake	0.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.56%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.56%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.56%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	30.90%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	28.65%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	13.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.18%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	4.49%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	3.37%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.25%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.25%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.69%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	1.12%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.12%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.12%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.56%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.56%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.56%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	19.66%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	13.48%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	11.24%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	9.55%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	8.99%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	4.49%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	3.93%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.25%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	2.25%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	2.25%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	2.81%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	2.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.69%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	1.12%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.12%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.12%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.12%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.12%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.12%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.12%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.56%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.56%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.56%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.56%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.56%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.56%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.56%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.56%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.56%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.56%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006638	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A	Environmental	Open in IMG/M
3300006795	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B	Environmental	Open in IMG/M
3300006950	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-one	Environmental	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009629	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_100	Environmental	Open in IMG/M
3300009633	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10	Environmental	Open in IMG/M
3300009636	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_150	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300014151	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_60_metaG	Environmental	Open in IMG/M
3300014152	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_60_metaG	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014161	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014494	Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaG	Environmental	Open in IMG/M
3300014496	Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014499	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300014655	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016700	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016728	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016730	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018008	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300019270	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019787	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300019788	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (PacBio error correction)	Environmental	Open in IMG/M
3300022516	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E3 30-34	Environmental	Open in IMG/M
3300022520	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E2 20-24	Environmental	Open in IMG/M
3300022593	Freshwater microbial communities from thermokarst lake SAS2a, Kuujjuarapick, Canada - Sample Winter W2	Environmental	Open in IMG/M
3300023091	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 30-34	Environmental	Open in IMG/M
3300025453	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40 (SPAdes)	Environmental	Open in IMG/M
3300025506	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40 (SPAdes)	Environmental	Open in IMG/M
3300025507	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40 (SPAdes)	Environmental	Open in IMG/M
3300025891	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-one (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026456	Peat soil microbial communities from Stordalen Mire, Sweden - H.B.S.T-25.r2	Environmental	Open in IMG/M
3300027570	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG (SPAdes)	Environmental	Open in IMG/M
3300027662	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300028558	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG	Host-Associated	Open in IMG/M
3300028562	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N1_3	Environmental	Open in IMG/M
3300028565	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_3	Environmental	Open in IMG/M
3300028666	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG	Host-Associated	Open in IMG/M
3300028731	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E1_2	Environmental	Open in IMG/M
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental	Open in IMG/M
3300028748	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_2	Environmental	Open in IMG/M
3300028762	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_3	Environmental	Open in IMG/M
3300028779	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_2	Environmental	Open in IMG/M
3300028783	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_3	Environmental	Open in IMG/M
3300028798	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2	Environmental	Open in IMG/M
3300028813	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_3	Environmental	Open in IMG/M
3300028882	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_3	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029817	Soil microbial communities from Marcell Experimental Forest, Minnesota, USA - Bog25	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029883	I_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300029914	III_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029916	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E3_1	Environmental	Open in IMG/M
3300029917	I_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029920	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_3	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029952	II_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029955	II_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029985	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_1	Environmental	Open in IMG/M
3300029993	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E2_2	Environmental	Open in IMG/M
3300030020	II_Bog_N1 coassembly	Environmental	Open in IMG/M
3300030225	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_3	Environmental	Open in IMG/M
3300030294	II_Fen_E3 coassembly	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030688	II_Bog_N2 coassembly	Environmental	Open in IMG/M
3300030906	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_3	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031242	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG	Host-Associated	Open in IMG/M
3300031249	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG	Host-Associated	Open in IMG/M
3300031344	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG	Host-Associated	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031711	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG	Host-Associated	Open in IMG/M
3300031788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300032675	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18015	Environmental	Open in IMG/M
3300032676	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18023	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033890	Peat soil microbial communities from Stordalen Mire, Sweden - 713 E-1-M	Environmental	Open in IMG/M
3300034091	Peat soil microbial communities from McLean, Ithaca, NY, United States - MB00N	Environmental	Open in IMG/M
3300034282	Peat soil microbial communities from wetlands in Alaska, United States - Eight_mile_03D_16	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0070674_1019570691	3300005356	Miscanthus Rhizosphere	HKHKFRVEKDGHIPAPTEPGLGYPIDRDALDKMLVRIDR*
Ga0070673_1016609972	3300005364	Switchgrass Rhizosphere	MPHPANLVDRPYHKEIFRVDKEGYVHAPTAPGLSLPLDRNGLDKMLKRIDT*
Ga0070673_1019670812	3300005364	Switchgrass Rhizosphere	ADRPYHKHKFRVEKDGHIPAPTELGLGYPIDSSCADKMLVRVDR*
Ga0070685_109327672	3300005466	Switchgrass Rhizosphere	ADRPYHKHKFRVEKDGHIPAPTEPGLGYPIDRDVLDKMLVRIDR*
Ga0068856_1015537242	3300005614	Corn Rhizosphere	YHKDKFRIDKDGYVLAPTEPGLGYPIDRDALDKIMKRIDR*
Ga0075028_1004752782	3300006050	Watersheds	DKIRIDKDGYVHAPTAPGLGYPIDRDALEKMTKRVEVG*
Ga0097621_1014331201	3300006237	Miscanthus Rhizosphere	RPYFMNKIRIDDKGFVHAPTEPGLGYPIDKNELDKVTIRIDR*
Ga0075522_102020741	3300006638	Arctic Peat Soil	YADRPEYKDKFRPDADGYVSAPTAPGLGYPIDHDALDKITKRIDR*
Ga0075520_11167882	3300006795	Arctic Peat Soil	FYKDKFRVDKDGYIYAPTAPGLGYPIDHDALDNITARIER*
Ga0075524_101036452	3300006950	Arctic Peat Soil	RTDANGFVLAPTEPGLGYPFDRAALDKIMIRIDR*
Ga0105248_121457401	3300009177	Switchgrass Rhizosphere	QRDPPVDKEGYVHAPTAPRLSLPLDRNGLDNMLKRIDT*
Ga0105238_116977882	3300009551	Corn Rhizosphere	KFRPDAEGYIHAPTEPGLGYPIDRAALDRITKRIER*
Ga0116119_10799611	3300009629	Peatland	YHKDKFRVDRDGYVNAPTEPGLGYPIDRDALDKIMVRIDT*
Ga0116129_11301212	3300009633	Peatland	FRPDAEGYIHAPTLPGMGVVINRSELDRLTKQVLR*
Ga0116112_10548161	3300009636	Peatland	RPYQAKFRIDKDGYVLAPTEPGLGYPIDHDALDKIMKRIDR*
Ga0116135_10423773	3300009665	Peatland	YYPQKLRIDKDGYVQAPTEPGLGYAIDHNVLDKMLKRVDS*
Ga0116215_15200651	3300009672	Peatlands Soil	YADRPYYKDKFRIDADGYVHAPAAPGLGYPLDMDALDNMTKRIDR*
Ga0116134_12615931	3300009764	Peatland	DRVYHKDKFRIDQDGYIHAPTEPGLGYPLDRDALDKIMVRIDR*
Ga0136449_1013121192	3300010379	Peatlands Soil	DKFRIDKDGYVLATAEPGLGVALDRAALDKMTKTINR*
Ga0134127_110035981	3300010399	Terrestrial Soil	PSEYTDRPFYKDKFRIDQDGFVLAPTAPGLGYPLDMDALANVTKRIDR*
Ga0157369_119187522	3300013105	Corn Rhizosphere	DHPYFNYKFRPDKDGYIAAPTQPGLGYPIDRAALDKVTKRIDR*
Ga0181539_11182361	3300014151	Bog	IRPDKDGYVIAPTAPGLGYPIDHDALDKMLIRIDR*
Ga0181533_11016901	3300014152	Bog	HKDKFRIDKDGYIIAPTAPGLGYPFDRDVLDKMTKRIDV*
Ga0181533_12844162	3300014152	Bog	VDRPYQAKFRVDQDGYVLAPTEPGLGYPIDHNALDKIMKRIDR*
Ga0181518_104252662	3300014156	Bog	HKDKFRVDKDGYVNAPTEPGLGYPVDRDALDKIMVRIDR*
Ga0181518_104557752	3300014156	Bog	KFRPDADGYVPAPTAPGLGYPIDRAALDKVTTRIDR*
Ga0181521_100980081	3300014158	Bog	PYQPQFRIDRDGYVLAPAEPGLGVPIDHNALDKIMKRVDR*
Ga0181521_103711331	3300014158	Bog	FSYKFRPDKDGYIPAPTDPGLGYAIDRAALDKVTLRIDR*
Ga0181521_105393611	3300014158	Bog	YQDKFRIDADGYVHAPTAPGLGYPLDMNALDNMTLRIDR*
Ga0181530_104311662	3300014159	Bog	YYKDKFRIDADGYVHAPTAPGLGYPLDFDALDKMTLRIDR*
Ga0181517_100819251	3300014160	Bog	EYADRPYYKDKFRIDADGYVHAPTAPGLGYPLDMDALDNMTTRIDR*
Ga0181529_101049791	3300014161	Bog	HPVTFADRPYQPQFRIDKDGYVLASKEPGLGCPIDFNALDKLLIRIDR*
Ga0181538_100728644	3300014162	Bog	WPMEYADRVYHKDKFRVDQDGYVNAPTEPGLGYPIDRDALDKIMVRIDR*
Ga0181538_103018211	3300014162	Bog	KFRVDQDGYINAPTAPGLGYPIDRDALDKIMIRIDR*
Ga0181532_102605681	3300014164	Bog	DKFRVDQDGYINAPTAPGLGYPIDRDALDKMMVRIDR*
Ga0181523_107403432	3300014165	Bog	TDRSYFSYKFRPDADGYVPAPTAPGLGYPIDRAALDKVTTRIDR*
Ga0181534_101563032	3300014168	Bog	RPDADGYVPAPTAPGLGYPIDRDALDKVTKRIDR*
Ga0181534_108648911	3300014168	Bog	PYYTPRLRIDRDGYVAAPTEPGLGYSIDHNALDKVLKRVDS*
Ga0181531_108301982	3300014169	Bog	EYSYKFRPDADGYVPAPTAPGLGYAIDRAALDKVTLKINR*
Ga0181535_103362261	3300014199	Bog	FRVDKDGYIAAPTAPGLGYPIDRDELDKMTKRIDA*
Ga0181535_105558292	3300014199	Bog	EYADRPFYKDKFRIDADGYVHAPTAPGLGYPLDMDALDNMTKRIDR*
Ga0181526_107973081	3300014200	Bog	AVDRPYQAKFRVDTDGYVLAPTEPGLGYPIDHDALDKIMKRVDR*
Ga0181526_108478052	3300014200	Bog	PEYKDKFRVNEEGYVLAPTAPGLGYPIDRDALDKVTKRIDR*
Ga0181537_110350702	3300014201	Bog	DRPEYKDKFRINEDGYVLAPTAPGLGYPIDRDALDKMTKRIDR*
Ga0181537_112198971	3300014201	Bog	KFRLDKDGYVNAPPGPGLGMELDRDGLDRILLRIDR*
Ga0182013_102617522	3300014492	Bog	SDRAYHKDKFRVDAEGYIHAPTAPGLGYPFDRDVLDKMTKRIDV*
Ga0182017_101647892	3300014494	Fen	QDRSYHKDKIRIDKDGYVPAPTAPGLGYPLDRDVMDKIMINIER*
Ga0182011_104655641	3300014496	Fen	EYSDRVYHKDKFRVDQNGYINAPTEPGLGYPIDRDALDKIMVRIDR*
Ga0182011_108759402	3300014496	Fen	YHKDKFRIDENGYVNAPTEPGLGYPIDHDALDKMMVRVDK*
Ga0182011_109290422	3300014496	Fen	PWPMGSFDRVYHKDKIRPDADGYVHAPTAPGLGYPLDRDALDKITKRIDR*
Ga0182019_105603741	3300014498	Fen	DRPFYKDRFRIDADGYVHAPTAPGLGYPLDMDALDNMTKRIDR*
Ga0182019_112587222	3300014498	Fen	YHKDKIRPDADGYVHAPTAPGLGYPLDRDALDKITKRIDR*
Ga0182012_103771611	3300014499	Bog	ADRPYYKDKFRINEEGFVLAPTEPGLGYPINHDTLANMTIRINR*
Ga0182024_107933931	3300014501	Permafrost	FRVDKDGYIPAPTAPGLGYPIDRDALDKITKRIDA*
Ga0182024_114312481	3300014501	Permafrost	PEYKDKFRINEEGYVLAPTAPGLGYPIDRDALDKMTKRIDR*
Ga0182021_119638122	3300014502	Fen	RAYSKTKFRVDQDGYVNATADPGLGCPIDHDALDKIMIRVDR*
Ga0182021_124668152	3300014502	Fen	ADRPYQEKFRIDKDGYVLAPTEPGLGYPINRDALDKIMKRIDR*
Ga0181536_102391691	3300014638	Bog	EYADRAYHKDKFRVDQDGYINAPTAPGLGYPIDRDALDKMMVRIDR*
Ga0181536_103645091	3300014638	Bog	MPHPASYVDRPYHKDKFRIDKDSYVIASAAPGLGYPIDHDALDKMTKRIDR*
Ga0181536_103830622	3300014638	Bog	VYHKDKFRVDKDGYVNAPAEPGLGYPIDRDALDKIMVRIDR*
Ga0181516_101453062	3300014655	Bog	YADRPEYSYKFRPDADGYVPAPTEPGLGYPIDRAALDKITKRIDR*
Ga0181522_101648582	3300014657	Bog	HKDKFRIDKDGYVLAPTAPGLGYPFDRDVLDKMTKRVDV*
Ga0181522_106630451	3300014657	Bog	HKDRFRVDKDGYIAAPAAPGLGYPIDRDTLDKMTKRIDA*
Ga0181519_102512901	3300014658	Bog	YHKDKFRVDKDGYIAAPTAPGLGYPIDRDELDKMTKRIDA*
Ga0181519_108886142	3300014658	Bog	RPYHKDKFRIDKDGYIMAPTAPGLGYPFDRDVLDKMTKRVDV*
Ga0182030_115832351	3300014838	Bog	SDRVYHKDKFRIDQEGYVNAPTEPGLGYPIDRDALDRIMVRIDR*
Ga0182030_116246831	3300014838	Bog	PYQAKFRIDKDGYVLAPTEPGLGYPIDRNELDKIMKRIDR*
Ga0182027_100354031	3300014839	Fen	RVYHKDKFRVDKDGYINAPTEPGLGYPIDRDALDKIMVRIDR*
Ga0182027_101749693	3300014839	Fen	YHKDKFRIDKDSYVIASAEPGLGYPIDRDVLDKMTKRIDR*
Ga0182027_103696011	3300014839	Fen	PYHKDKCRIDKDSYVIASAAPGLGYPIDHDALDKMTKKIDR*
Ga0182027_114728731	3300014839	Fen	PHPSSYVDRPYHKDKFRIDKDSYVIASAAPGLGYPIDHDALDKMTKRIDR*
Ga0182027_116579632	3300014839	Fen	FRIDADGYVHAPTAPGLGYPLDFDALEKMTIRIDR*
Ga0182027_117266831	3300014839	Fen	KFRIDADGYVVAPTAPGLGYPMDMDALDKMLIRVDK*
Ga0182027_118996311	3300014839	Fen	WPMEYSDRAYHKDKFRIDQEGYVIAPTEPGLGYPLDRDALDKMMVRIDR*
Ga0132255_1021669452	3300015374	Arabidopsis Rhizosphere	RIDKDGYVFAPTEPGLGYPIDRDALDKILKKIDR*
Ga0181513_13872702	3300016700	Peatland	PHPVTAVDRPYHKDKFRIDKDGYVLAPTQPGLGYPIDRNELDKIMKRVET
Ga0181500_13709132	3300016728	Peatland	YADRPFYKDKFRIDADGYVHAPTAPGLGYPLDMNALDNMTKRIDR
Ga0181515_11612743	3300016730	Peatland	FRIDKDSYVIASAEPGLGYPLDRDALDKMTKRIDR
Ga0187849_12732141	3300017929	Peatland	YHKDKFRIDQDGYIHAPTEPGLGYPLDRDALDKIMVRIDR
Ga0187848_102587591	3300017935	Peatland	TDPSYFSYKFRPDKDGYIPAPTDPGLGYPIDRAALDKVTTRIDR
Ga0187854_100407441	3300017938	Peatland	PFPAEYADRPYYQDKFRIDADGYVHAPTAPGLGYPLDMNALDNMTLRIDR
Ga0187879_103170222	3300017946	Peatland	TFRIDAEGYVQAPTQPGLGYPIDRDALDKMIKRIDR
Ga0181520_104240772	3300017988	Bog	GQFRVDKDSYILASTAPGLGITLDRDALDKITTRIDR
Ga0181520_108714881	3300017988	Bog	PAEYADRPYHKDKFRIDKDGYIAAPTAPRLGYPLDRDALDKMTKRIDV
Ga0181520_109750511	3300017988	Bog	DKFRIDKSGYVVATAEPGLGVALDRGALDKMTKTINR
Ga0187888_10058381	3300018008	Peatland	SYVDRPYHKDKFRIDKDSYVIASAEPGLGYPLDRDALDKMTKRIDR
Ga0187872_101158872	3300018017	Peatland	SYFSYKFRPDKDGYIPAPTDPGLGYPIDRAALDKVTTRIDR
Ga0187872_104990831	3300018017	Peatland	DRPYYKDNFRIDADGYVHAPTAPGLGYPLDFDALEKMTIRIDR
Ga0187867_106734941	3300018033	Peatland	QFRVDKDSYILASTAPGLGITLDRDALDKITTRIDR
Ga0187855_105574821	3300018038	Peatland	PKFRIDQEGYVHAPTEPGLGYPIDRDALDKIMNRIDR
Ga0187871_101599842	3300018042	Peatland	SYFSYKFRPDADGYIPAPTEPGLGYPIDRAALDKVTTRIDR
Ga0187871_102682321	3300018042	Peatland	YQDKFRIDADGYVHAPTAPGLGYPLDMNALDNMTKRIDR
Ga0187887_103502771	3300018043	Peatland	PAEYADRPYHKYKFRVDADGYIPAPTAPGLGYPLDRGALDKMTTRVDV
Ga0187887_106158352	3300018043	Peatland	FYKDKFRIDAEGYVVAPTAPGLGYPLDMDALDKMLIRIDR
Ga0187887_108502242	3300018043	Peatland	FYKDKFRIDADGYVHAPTLPGLGYPLDMDALDKMIKRIDR
Ga0187890_105744642	3300018044	Peatland	DRSYFSYKFRPDADGYIPAPTEPGLGYPIDRAALDKVTLRIDR
Ga0187890_107926381	3300018044	Peatland	YADRPFYKDKFRIDAEGYVVAPTAPGLGYPLDMDALDKMLIRIDR
Ga0181512_13815532	3300019270	Peatland	FEMPHPSSYVDRPWARDKFRIDKSGYVVATAEPGLGVALDRGALDKMTKTINR
Ga0182031_13694552	3300019787	Bog	LVRDAASGHAADRPYQAKFRIDKDGYVLAPTEPGWISIDRNELDKIMKRIDR
Ga0182028_12991331	3300019788	Fen	DRPYQAKFRIEKDGYVLAPTEPGLGYPIDRDALDKIMKRIDR
Ga0182028_13208234	3300019788	Fen	MKEKFRLDPNGSVLAPKYPGLGYPLDRDALDKIMIRIDR
Ga0224542_10439822	3300022516	Soil	KFRPDQDGYISAPTAPGIGYPIDRDALDKRLKRIDR
Ga0224538_10303242	3300022520	Soil	HPLFKVKFRPDQDGYISAPTAPGIGYPIDRDALDKRLKRIDR
Ga0236338_11211341	3300022593	Freshwater	ATAADRPYQAKFRIDKDGYVLAPTEPGLGYPIDRNALDKIMKRIDR
Ga0224559_10919461	3300023091	Soil	PYFNYKFRPDKDGNILAPTAPGLGYPIDRDALDKIIKRIDH
Ga0208455_10133763	3300025453	Peatland	YHKDKFRIDKDSYVIASAEPGLGYPLDRDALDKMTKRIDR
Ga0208937_10933491	3300025506	Peatland	VDRPYHKDKFRIDKDSYVIASAEPGLGYPLDRDALDKMTKRIDR
Ga0208188_10239373	3300025507	Peatland	PVTAADRPYQPKFRIDPDGYVLAPTEPGLGYPIDRDALDKILKRIDR
Ga0209585_102446611	3300025891	Arctic Peat Soil	FRTDANGFVLAPTEPGLGYPFDRAALDKIMIRIDR
Ga0207694_109777012	3300025924	Corn Rhizosphere	FNHKFRPDAEGYIHAPTEPGLGYPIDRAALDRITKRIER
Ga0207651_111473061	3300025960	Switchgrass Rhizosphere	WFEVPHPAEYADRPYHKHKFRVEKDGHIPAPTELGLGYPIDSSCADKMLVRVDR
Ga0255351_10269971	3300026456	Soil	PEYKDKFRINKDGYILAPTEPGLGYPIDRDALDKVTKRIDR
Ga0208043_10198133	3300027570	Peatlands Soil	YQAQFRIDKDGYVLAPTEPGLGYPIDRNALDKLMKRIDR
Ga0208565_12295841	3300027662	Peatlands Soil	YADRPYYKDKFRIDADGYVHAPAAPGLGYPLDMDALDNMTKRIDR
Ga0209067_104829622	3300027898	Watersheds	VEYSDRPYHKDKFRIDAEGYIHAPTAPGLGYPFDRDVLDKMTKRVDV
Ga0265326_100173471	3300028558	Rhizosphere	KFRIDSEGYIPAPTEPGLGYPIDHDALDKITKKISR
Ga0302151_102077752	3300028562	Bog	YYKDKFRIDAEGFVSAPTAPGLGYPLDYDALDKMMKRIDK
Ga0302145_100878513	3300028565	Bog	FKYQFRIDKDGYVPAPTEPGLGCPIDKDALDNITQRINR
Ga0265336_101702571	3300028666	Rhizosphere	KFRLDKDGYVNAPPGPGLGLELDRDALDKILLRIDR
Ga0302301_11430931	3300028731	Palsa	DRPYFKYKFRINEEGYVMAPTEAGLGYPIDRDALDKLTKRIDR
Ga0302219_100828042	3300028747	Palsa	AYLKNKFRIDADSYILAPTDPGLGLPIDRDALDKVTKQINR
Ga0302156_100088711	3300028748	Bog	EYADRPYYKDKFRIDADGFVSAPTAPGLGYPLDFDELDKMLKRVDK
Ga0302156_101868572	3300028748	Bog	KFRIDAEGYIHAPTAPGLGYPFDRNVLDKMTKSITVG
Ga0302202_103413602	3300028762	Bog	PYYKDKFRIDADGFVAAPTAPGLGYPLDHDALEKVLLRIDR
Ga0302266_103122962	3300028779	Bog	KYRPDVDGYIHAPTLPGLGVPINRAELDRLTKRIDR
Ga0302279_102645001	3300028783	Bog	DKFRIDADGFVSAPTAPGLGYPLDFDALDKMLKRVDK
Ga0302222_101083892	3300028798	Palsa	PYLKNKFRIDADSYVLAPTDPGLGLPIDRDALDKLTKQINR
Ga0302157_100360591	3300028813	Bog	ADHPYFSHKFRPDKDGYIHAPTDPGMGYAIDRAALDKAIKRIDR
Ga0302154_101541342	3300028882	Bog	PAEYADRPFYKDKFRIDAEGYVHAPTAPGLGYPLDMNALDNMTKRIDR
Ga0308309_113467381	3300028906	Soil	LKNKFRIDQDSYILAPTEPGLGLLIDRAALDKITKQILR
Ga0247275_11354932	3300029817	Soil	DKFRIDADGYVHAPTAPGLGYPLDMNALDNMTLRIDR
Ga0311368_106893301	3300029882	Palsa	KYKFRIDSDGCVAAPTEPGLGYPIDRTELDKVTKQVLR
Ga0311327_100010701	3300029883	Bog	KFRPDKDGYIHAPTDPGMGYAIDRAALDKAIKRIDR
Ga0311369_108593871	3300029910	Palsa	YKFRPDQDGYIPAPTEPGLGYPIDRAALDKVTTKIAR
Ga0311369_111862461	3300029910	Palsa	YKDKFRINEEGYVLAPTAPGLGYPIDRDALDKVTKRIDR
Ga0311359_104187421	3300029914	Bog	KDKFRIDADGYVHAPTSPGLGYPLDMDALDNMTKRIDR
Ga0302148_10057171	3300029916	Bog	PYYKDKFRIDADGFVSAPTAPGLGYPLDFDALDKMLKRVDK
Ga0311326_101553702	3300029917	Bog	YADRPEYKDKFRINKDGYILAPTEPGLGYPIDHDALDKVTKRIDR
Ga0311326_104349472	3300029917	Bog	KFRPDADGYVPAPTAPGLGYAIDRAALDKVTLKINR
Ga0302142_11215832	3300029920	Bog	DRPYYKDKFRIDADGFVSAPTAPGLGYPLDFDALDKMLKRVDK
Ga0311371_101109681	3300029951	Palsa	DRPYYKDKFRIDEEGYVLAPTAPGLGYPIDHDALANLTKRIDR
Ga0311346_113502671	3300029952	Bog	DKFRIDSEGYVHAPTAPGLGYPFDKAILDKLTLRVDV
Ga0311342_101155041	3300029955	Bog	PELADHPYFNYKFRPDKDGNILAPTAPGLGYPIDRDALDKIIKRIDH
Ga0302280_11731212	3300029985	Fen	EYADRPYYKDKFRIDADGFVSAPTAPGLGYPLDFDALDKMLKRVDK
Ga0302304_103556061	3300029993	Palsa	YLKTKLRINQDSYVLAPTEPGLGLVIDHDALDRITKKINI
Ga0311344_103932552	3300030020	Bog	YHKDKFRIDAEGYVHAPTAPGLGYPFDRDVLDKLTLRIDV
Ga0302196_100543613	3300030225	Bog	PYFSHKFRPDKDGYIHAPTDPGMGYPIDRAALDKAIKRIDR
Ga0311349_122310512	3300030294	Fen	RPYHKDRLRIDKDGYVPAPKAPGLGYPLDRDALDKITKRIDR
Ga0311353_110600442	3300030399	Palsa	EYADRPYYKDKFRINEEGYVLAPTAPGLGYPIDHDSLANITKRIDR
Ga0311357_103676562	3300030524	Palsa	NKFRIDADSYILAPTDPGLGLPIDRDALDKVTKQINR
Ga0311355_1001046510	3300030580	Palsa	KNKFRIDADSYILAPTDPGLGLPIDRDALDKVTKQINR
Ga0311356_108606871	3300030617	Palsa	YYKDKFRIDEEGYVLAPTAPGLGYPIDHDALANLTKRIDR
Ga0311354_107439011	3300030618	Palsa	PEYADRPYYKDKFRINEEGFVLAPTEPGLGYPINHDTLANMTIRINR
Ga0311345_108215681	3300030688	Bog	PEEYADRPEYKDKFRINKDGYILAPTEPGLGYPIDRDALDKVTKRIDR
Ga0311345_112052361	3300030688	Bog	FTDRGYLKQRFRIDQDSNVLAPTAPGLGLPLDRDALDKLTVRIER
Ga0302314_111293131	3300030906	Palsa	KFRIDEEGYVLAPTAPGLGYPIDHDALANLTKRIDR
Ga0302323_1020631361	3300031232	Fen	AKFRIDKDGYVLAPTEPGLGYPIDRNELDKIMKRIDR
Ga0302325_110450692	3300031234	Palsa	RPYLKNKFRIDQDSYVLAPTDPGLGLPIDRAALDKLTTKILR
Ga0302325_124520412	3300031234	Palsa	PATAVDRPYQAQFRIDKDGYVPAPTEPGLGYPIDRNALDKLLKRIDR
Ga0265329_103477661	3300031242	Rhizosphere	DKFRIDKDGYVLAPTAPGLGYPIDRDELDKLMKRIDK
Ga0265339_103294791	3300031249	Rhizosphere	PNSAEHTDRVYMKEKFRIDKDGYVLAPKYPGLGYPLDRDALDKIMIRIDR
Ga0265339_104803372	3300031249	Rhizosphere	FRIDKDGYLLAPTEPGLGYPIDRNALDKLLKRIDR
Ga0265316_100734521	3300031344	Rhizosphere	VYHKDKFRVDQDGYVSAPTQPGLGYPIDRDALDKIMVRIDR
Ga0302320_105599793	3300031524	Bog	KFRVDQDGYVNAPTEPGLGYPIDRDALDKIMVRIDR
Ga0302320_119437022	3300031524	Bog	QTLTDRNYLKNKWRINKDGYVEAPTEPGLGCPLDRDNLDKMLTRIDR
Ga0265314_103939341	3300031711	Rhizosphere	FPAEYADRAYHKDKFRIDADGYVLAPTAPGLGYPIDRDVLDKMILRIDR
Ga0302319_106550071	3300031788	Bog	YTDRSYFNYKFRPDADGYVPAPTAPGLGYPIDRAALDKVTTRIDR
Ga0302322_1015189861	3300031902	Fen	AEQTDRVYMKEKFRIDKDGYVLAPKYPGLGYPLDRDALDKIMIRIDR
Ga0308175_1030290232	3300031938	Soil	FRPDAEGYIHAPTEPGLGYPIDRAALDRITKRIER
Ga0308174_119465001	3300031939	Soil	YADRPYYKDKFRINEEGYVLAPTGPGLGYPIDRDALDKLTRRIDR
Ga0316225_10503832	3300032675	Freshwater	TDRAYFKYQFRIDKDGYVPAPTEPGLGYPIDRAALDKLTTRIDR
Ga0316229_10176191	3300032676	Freshwater	TDRAYFKYQFRIDKDGYVPAPTEPGLGYPIDRAALDKVTTRIDR
Ga0335070_104684181	3300032829	Soil	YMRDKIRADENGYVHAPTEPGLGYPLDRAALDKITKRIDR
Ga0335084_110138631	3300033004	Soil	KFRIDKDSYVLASTAPGLGYPIDHNALDKMTKRIDR
Ga0326728_105622352	3300033402	Peat Soil	HKDKFRIDAEGYIHAPTAPGLGYPFDRAVLDKMTKRVDVG
Ga0334810_143808_429_575	3300033890	Soil	HPATAVDRPYQDKFRIDKDGYVLAPTAPGLGYPINRNELDKLMKRIDR
Ga0326724_0420920_551_703	3300034091	Peat Soil	PDLTIKEVKVYHKDKFRIDEDSFVIASAEPGLGYPIDRDALDKMTKRIDR
Ga0370492_0101173_8_163	3300034282	Untreated Peat Soil	MPHPIEYADRPYHKDKFRVDKDGYIAAPTAPGLGYPFDKDVLDKMTIRIDS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F033085

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences