NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F033059

Metagenome Family F033059

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F033059
Family Type Metagenome
Number of Sequences 178
Average Sequence Length 67 residues
Representative Sequence MSRASVGMVIDKLLTDENLRIRFALDRLETVAELCLRGFDLTRDEIDLLCRTDAGVWFLRSAVSGAPQH
Number of Associated Samples 115
Number of Associated Scaffolds 178

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 82.02 %
% of genes near scaffold ends (potentially truncated) 20.22 %
% of genes from short scaffolds (< 2000 bps) 79.78 %
Associated GOLD sequencing projects 102
AlphaFold2 3D model prediction Yes
3D model pTM-score0.66

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (61.236 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere
(21.910 % of family members)
Environment Ontology (ENVO) Unclassified
(36.517 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(61.236 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.
1GPIPI_03341840
2MBSR1b_0426.00001520
3ICCgaii200_05350622
4ICChiseqgaiiDRAFT_06877983
5INPhiseqgaiiFebDRAFT_1014059422
6INPhiseqgaiiFebDRAFT_1015325783
7INPhiseqgaiiFebDRAFT_1015350831
8INPhiseqgaiiFebDRAFT_1052823342
9INPhiseqgaiiFebDRAFT_1052882501
10INPhiseqgaiiFebDRAFT_1052900981
11JGI1027J12803_1021241923
12JGI1027J12803_1030444452
13Ga0062593_1009482931
14Ga0062593_1010496291
15Ga0062589_1007146542
16Ga0062589_1011907451
17Ga0062590_1007076211
18Ga0063356_1000205854
19Ga0063356_1000621974
20Ga0063356_1001739894
21Ga0063356_1001942113
22Ga0063356_1003747813
23Ga0063356_1018846881
24Ga0063356_1026597932
25Ga0063356_1035139032
26Ga0062595_1003344572
27Ga0062592_1003259281
28Ga0062592_1019645321
29Ga0062594_1006870242
30Ga0062594_1033306021
31Ga0065715_100919493
32Ga0065715_101309672
33Ga0065715_107841682
34Ga0065705_103262221
35Ga0065705_104270941
36Ga0065707_111735711
37Ga0070676_101553711
38Ga0070666_100536932
39Ga0070689_1000051913
40Ga0070671_1014577391
41Ga0070674_1008815341
42Ga0070659_1021187721
43Ga0070678_1020330651
44Ga0070662_1018167272
45Ga0068858_1001886033
46Ga0068858_1019231251
47Ga0068860_1010335623
48Ga0081539_101617691
49Ga0075417_100327771
50Ga0075417_107319051
51Ga0068871_1021580841
52Ga0075428_10001174611
53Ga0075428_1007327411
54Ga0075428_1007616422
55Ga0075421_1002916313
56Ga0075421_1002961524
57Ga0075421_1004652892
58Ga0075421_1005179292
59Ga0075421_1006990161
60Ga0075421_1007252251
61Ga0075430_1004437292
62Ga0075431_1001610072
63Ga0075431_1007800092
64Ga0075431_1008120662
65Ga0075431_1008187672
66Ga0075433_112174982
67Ga0075420_1016195541
68Ga0075420_1017606561
69Ga0068865_1005590101
70Ga0075419_103719832
71Ga0075419_104802202
72Ga0111539_102504361
73Ga0111539_102509963
74Ga0111539_103690523
75Ga0111539_107248853
76Ga0111539_125051722
77Ga0075418_101214883
78Ga0075418_107628463
79Ga0114129_111198111
80Ga0114129_126440522
81Ga0075423_121677131
82Ga0105248_123167042
83Ga0105249_127571742
84Ga0105347_14193411
85Ga0105347_14327511
86Ga0105252_106046731
87Ga0105239_116735281
88Ga0137313_10967771
89Ga0137424_11076851
90Ga0137425_10910901
91Ga0137455_12219091
92Ga0137423_10668302
93Ga0137428_10109262
94Ga0137458_11011471
95Ga0120187_10290541
96Ga0137322_10053403
97Ga0137353_10263761
98Ga0162653_1000093501
99Ga0164303_112472661
100Ga0157374_115937492
101Ga0163162_100503853
102Ga0075311_11227961
103Ga0157380_130399692
104Ga0180088_10330101
105Ga0157376_110243561
106Ga0180093_11471232
107Ga0132258_100226922
108Ga0132258_101104852
109Ga0132258_122242483
110Ga0132258_126850182
111Ga0132255_1006325541
112Ga0163161_101483602
113Ga0163161_113538601
114Ga0163161_115882091
115Ga0184626_100127694
116Ga0184611_11138471
117Ga0184628_100005118
118Ga0184629_104381482
119Ga0190270_105272802
120Ga0190270_121225252
121Ga0190274_107226781
122Ga0190274_133225821
123Ga0190271_102301272
124Ga0190271_117869882
125Ga0190271_130615311
126Ga0173481_106308921
127Ga0190264_117767381
128Ga0210379_100074151
129Ga0207697_100070733
130Ga0207697_101307582
131Ga0207680_100229642
132Ga0207680_100542433
133Ga0207645_100567801
134Ga0207645_102019172
135Ga0207643_100040403
136Ga0207681_106168841
137Ga0207681_106324231
138Ga0207701_108633862
139Ga0207644_101722381
140Ga0207644_117564101
141Ga0207711_111123822
142Ga0207668_103704602
143Ga0207658_115405452
144Ga0207703_105470472
145Ga0207675_1011664842
146Ga0207698_106386243
147Ga0209481_103628261
148Ga0207428_107594171
149Ga0209382_1000749012
150Ga0209382_100509354
151Ga0209382_101250083
152Ga0209382_101581323
153Ga0209382_111034811
154Ga0209382_113292242
155Ga0247828_104706191
156Ga0268386_105392562
157Ga0299914_1000090010
158Ga0310888_107117291
159Ga0310887_107434922
160Ga0310887_107539451
161Ga0310904_109276881
162Ga0310892_100346262
163Ga0310892_102656803
164Ga0310893_100183531
165Ga0307406_108555192
166Ga0310900_103637732
167Ga0310884_104597691
168Ga0310902_103441662
169Ga0310906_108758981
170Ga0310890_104519072
171Ga0310896_101092661
172Ga0247830_100499013
173Ga0364945_0000239_13519_13707
174Ga0364929_0020498_2_184
175Ga0364929_0062384_451_639
176Ga0364933_041923_31_219
177Ga0364943_0107156_26_214
178Ga0364941_216722_327_500
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 52.58%    β-sheet: 0.00%    Coil/Unstructured: 47.42%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

102030405060MSRASVGMVIDKLLTDENLRIRFALDRLETVAELCLRGFDLTRDEIDLLCRTDAGVWFLRSAVSGAPQHSequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.66
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
38.8%61.2%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Groundwater Sediment
Soil
Groundwater Sediment
Soil
Terrestrial
Switchgrass Rhizosphere
Soil
Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Soil
Soil
Natural And Restored Wetlands
Switchgrass Rhizosphere
Sediment
Soil
Arabidopsis Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Tabebuia Heterophylla Rhizosphere
Switchgrass Rhizosphere
Arabidopsis Thaliana Rhizosphere
Miscanthus Rhizosphere
Corn, Switchgrass And Miscanthus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Miscanthus Rhizosphere
Populus Rhizosphere
Rhizosphere
Switchgrass Rhizosphere
Corn Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
7.9%6.2%5.6%6.2%8.4%3.4%2.8%2.8%4.5%21.9%5.6%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
GPIPI_033418402088090014SoilMVIEKLLTDVNLRNRFALDRMETVAELFLRGFDLSEDEIELFSRTDADLWFLDEPVRGERWH
MBSR1b_0426.000015202162886012Miscanthus RhizosphereVIDKLLTDEALRVEFALDRMETVAELWLRGAELTRDEVELLCLTDARLWLVGEEVRGEWQ
ICCgaii200_053506222228664021SoilMSRASVGIVIDKLLTDENLRIRFALDRLETVAELCLRGFDLTRDEIDLLCRTDAGVWFLRSAVRGAPEH
ICChiseqgaiiDRAFT_068779833300000033SoilMSQAGVGMVIEKLLTDEGLRIRFALDRIETIAELCLSGFELTRDELDLIYRTDVRLWFRDHVRGQWLQ*
INPhiseqgaiiFebDRAFT_10140594223300000364SoilMSQTGVGQVVEQLLTDENLRIQFALDRIETVANLCLRGFDLSREDIDLFCRTDARLWFFGDMARGERPQ*
INPhiseqgaiiFebDRAFT_10153257833300000364SoilMSRAGVGMVVEELLTDENLRVRFALDPMETVADLFLRGVDLTRNEIDLFRRTDPGVWFLRSALSGQPHH*
INPhiseqgaiiFebDRAFT_10153508313300000364SoilMSRAGVGMVVEELLTDENLRVRFALDPMETVADLFLRGVDLTRNEIDLFRRTDPSLWFLTSALSGQPQH*
INPhiseqgaiiFebDRAFT_10528233423300000364SoilMSRAGVEMVVGKLLTDEGLRLQFALNPTETVIELVLRGFDLTRDEIDLFCRTDAGLWFLRSAVKGAPQH*
INPhiseqgaiiFebDRAFT_10528825013300000364SoilMSRAGVEMVVGKLLTDEGLRLQFALNPTETVIELVLRGFDLTRDEIDLFCRTDAGLWFLRSAVKGAPRH*
INPhiseqgaiiFebDRAFT_10529009813300000364SoilGDAMSRAGVEMVVGTLLTDENLRLQFALNPTETVIELVLRGFDLTPDEIDLFCRTDAGLWFLRSAVKGAPRH*
JGI1027J12803_10212419233300000955SoilMSRASVGMVIDKLLTDETLRMRFAVDPMETVAELFLRGFDFTRDEIDLLCRTDASVWFLRSAVEGAPQH*
JGI1027J12803_10304444523300000955SoilMSRGGVGMVIEKLLTDVNLRNRFALDRMETVAELFLRGFDLSEDEIELFSRTDADLWFLDEPVRGERWH*
Ga0062593_10094829313300004114SoilMSRAAVGMAVENLLTDETLRIRFAVDPMATVAELFLCGLDLTRDEVDLLCRTDPGLWFLRSALLGQPQH*
Ga0062593_10104962913300004114SoilMSRAGVGMVIEKLVTDENLRIRFAVDRIDTVAEIFLRGFDLSQDELDLFCRTDAGLWFLSELAIGEPQH*
Ga0062589_10071465423300004156SoilMSRAGVGLVIEKLLTDENLRNRFALDRMETVAEMFLWGVDLGPAEIDLFCRTDPALWFLGELVTGERQH*
Ga0062589_10119074513300004156SoilMSQAAVGTVVENLLTNEDLRLRFALDPMDTIADLFLCGLDLTRDEIDLLCRTDPGLWFLRSALRGQPQH*
Ga0062590_10070762113300004157SoilMSRAGVGMVIEKLVTDEDLRICFALDRMETLVELCLRGLDLTGDEIDLFCRTDPGVWSLSKTVGGVV*
Ga0063356_10002058543300004463Arabidopsis Thaliana RhizosphereMSRVGVGIVIDKLLTDEALRVEFALDRIETVAELCLRGAELTRDEVELLCLTDARLWLVGEEVRGEWQQ*
Ga0063356_10006219743300004463Arabidopsis Thaliana RhizosphereMSRVGVGMVIEKLLADENLRIRFALDRMETLAELFLRGFDLSQDEIELFSWADADLWFLSEPVRGERQH*
Ga0063356_10017398943300004463Arabidopsis Thaliana RhizosphereMSQAGVGTVIEKLLTDENLRIRFALDRIETVAELCLRGVELTHTEVELFCWTNADLWFLGDEVSGEWQH*
Ga0063356_10019421133300004463Arabidopsis Thaliana RhizosphereMSRTGVKLVIETLLTDESVRIRLALDRTETMAELCLRGFELTREEMDLFTRTDARLWFLGDRFGNEWRQ*
Ga0063356_10037478133300004463Arabidopsis Thaliana RhizosphereMPRAIVGIVVEKLFSDENLRIQFALDPMETIAELCLRGFELTRDEIDLFCRTDARLWFTVDQVRGTWH*
Ga0063356_10188468813300004463Arabidopsis Thaliana RhizosphereMSQAGVGTVIEKLLTDKNLRIRFALDQLETVAELCLRGVELTRDEVDLFCWTNARLWFLGDEVRGE*
Ga0063356_10265979323300004463Arabidopsis Thaliana RhizosphereVEELLTDENLRVRFALEPMETVAELFLRGVDLTRHEIDLFRRTDPTVWFLSSALSGQPQH
Ga0063356_10351390323300004463Arabidopsis Thaliana RhizosphereMVIEKLLTDERLRVEFALDRMETIAELCLRGFELTRDEVDLISRTDARLWFLADRVGGECLQ*
Ga0062595_10033445723300004479SoilMSRAAVGMVVEELLTDENLRVRFALEPMETVAELFLRGVDLTRHEIDLFRRTDPTVWFLSSALSGQPQH*
Ga0062592_10032592813300004480SoilMSQAAVGMVIEKLLTDENLRIRFALDRMETVAELFLRGFDLSQDEIELFSRTDADLWFLGEPVRGERQH*
Ga0062592_10196453213300004480SoilMSRAGVGMVIEKLLTDERLRVDFALDRMETIAELCLRGFELTRDEIDLISRTDARLWFLGDQV
Ga0062594_10068702423300005093SoilMSQAGVGTVIDKLLTDKNLRIRFALDQLETVAELCLRGVELTRDEVDLFCWTNARLWFLGDEVRGE*
Ga0062594_10333060213300005093SoilGEAMSQAGVGTVIEKLLTDENLRIRFALDQMETVAELCLRGVELTREEVDLFCWTNARLWFLGDEVRGE*
Ga0065715_1009194933300005293Miscanthus RhizosphereMSRVGVGIVIDKLLTDEALRVEFALDRMETVAELWLRGAELTRDEVELLCLTDARLWLVGEEVRGEWQQ*
Ga0065715_1013096723300005293Miscanthus RhizosphereMSQAGVGTVIEKLLTDENLRIRFALDQMETVAELCLRGVELTREEVDLFCWTNARLWFLGDEVRGE*
Ga0065715_1078416823300005293Miscanthus RhizosphereMSRAAVGLVVESLLTDENLRTRFAIDPMATVAELFLCGLDLTCDEVDLLCRTDPGLWFLRSALKGQPQH*
Ga0065705_1032622213300005294Switchgrass RhizosphereMSRAGVGMVIEKLLTDENVRICFALDRMETLVELCLRGLDLTGDEIDLFCRTDPGVWSPSKTVGSAV*
Ga0065705_1042709413300005294Switchgrass RhizosphereMSRAGVGMVIEKLLTDEKLRIRFALDRMETVAELFLRGFDLSQDDIDLFFRTDAGLWFLDDTVRGERQQ*
Ga0065707_1117357113300005295Switchgrass RhizosphereMSRAGVGMVIEKLLTDEKLRIRFALDRMETVAELFLRGFDLSQDDIDLFFRTDAGLWFLDDTVR
Ga0070676_1015537113300005328Miscanthus RhizosphereMSQAGVGTVIDKLRTDKNLRIRFALDQLETVAELCLRGVELTRDEVDLFCWTNARLWFLGDEVRGE*
Ga0070666_1005369323300005335Switchgrass RhizosphereMSQAGVGTVIEKLLTDQNLRIRFALNQIETVAELCLRGVELTREEVDLFCWTNARLWFLGDEVGGE*
Ga0070689_10000519133300005340Switchgrass RhizosphereMSRVGVGIVIDKLLTDEALRVEFALDRMETVAELCLRGAELTRDEVELLCLTDARLWLVGEEVRGEWQQ*
Ga0070671_10145773913300005355Switchgrass RhizosphereMSRAGVGTVIEKLLTDKCLRIRFALDRIETIAELYLGGFELTRDEIDLFCRTDARLWFLGDN
Ga0070674_10088153413300005356Miscanthus RhizosphereMSRAAVGLVVENLLTDENLRFRFAIDPMATVAELFLCGLDLTCDEVDLLCRTDPGLWFLRSALRGQPQH*
Ga0070659_10211877213300005366Corn RhizosphereGVGTVIEKLLTDQNLRIRFALNQIETVAELCLRGVELTREEVDLFCWTNARLWFLGDEVRGE*
Ga0070678_10203306513300005456Miscanthus RhizosphereMSQAGVGTVIEKLLTDENLRIRFALDQMETVAELCLRGVELTRDEVDLFCWTNARLWFLGDEVRGE*
Ga0070662_10181672723300005457Corn RhizosphereVGTVIDKLLTDKNLRIRFALDQLETVAELCLRGVELTRDEVDLFCWTNARLWFLGDEVRGE*
Ga0068858_10018860333300005842Switchgrass RhizosphereMSRVGVGIVIDKLLTDEALRVEFALDRMETVAELWLRGAELTRDEVELLCLTDARLWLVGEEV
Ga0068858_10192312513300005842Switchgrass RhizosphereMSQAGVGTVIDKLLTDKNLRIRFALDQLETVAELCLRGVELTRDEVDLFCWTNAR
Ga0068860_10103356233300005843Switchgrass RhizosphereMADAGQNEEGVVSRAGVGIVVEKLLSDETLRARFALDPMETVADLFLRGVDLTRCEIDLLRRTDPGVWFLRSAQSGQPQH*
Ga0081539_1016176913300005985Tabebuia Heterophylla RhizosphereMSQAGVGMAIERLLTDENLRGRFAADRIETVAEMCLCGVDLTRDEIELFFRTDPRVWCVADEVKSERRL*
Ga0075417_1003277713300006049Populus RhizosphereMSQAAVGTVVENLLTNEDLRLRFALDPMDTIADLFLCGLDLTRDEIDLLCRTNPGLWFLRSALRGQPQH*
Ga0075417_1073190513300006049Populus RhizosphereYSSEGGEAMSQAGVGTVIDKLLTDKNLRIRFALDQLETVAELCLRGVELTRDEVDLFCWTNARLWFLGDEVRGE*
Ga0068871_10215808413300006358Miscanthus RhizosphereGVGTVIEKLLTDENLRIRFALDQMETVAELCLRGVELTREEVDLFCWTNARLWFLGDEVRGE*
Ga0075428_100011746113300006844Populus RhizosphereMSRVNVGLVIDKLLTDENLRIRFALDRLETVAELYLRGFDLTRDEIDLLCRTDAGVWFLRSAVSGAPLH*
Ga0075428_10073274113300006844Populus RhizosphereMSRAGVGMVIETLLTDERLRVRFSLDRIEAIAELCLRGVELTRDEIDLVCRTDVRLWFPGDHVRGEWLQ*
Ga0075428_10076164223300006844Populus RhizosphereMSQMGVEEVVDLLLTNENLRIRFALDRIETVAELCLLGFDLSPEDVELFCWTDPRLWFGDIARGERLH*
Ga0075421_10029163133300006845Populus RhizosphereMSQAGVGMVIEKLLTDERLRIRFARDRMETIAELCLRGFELTRDEIDLIYRTDARLWFVSDHVRGEWLQ*
Ga0075421_10029615243300006845Populus RhizosphereMSRASVGMVIDKLLTDEHLRIRFALDRLETVAALCLGGFDLTRDEIDLLCGTDAGVWFLRSAVRGAPQH*
Ga0075421_10046528923300006845Populus RhizosphereMSRAAVGMVVESLLTDENLRIRFAVDPMVTVAELFLCGLDLTGDEIDLLSRADPGLWFLRSALEGQPLH*
Ga0075421_10051792923300006845Populus RhizosphereMSQAGVGTVIEKLLTDQNLRIRFALNQIETVGELCLRGVELTREEVDLFCWTNARLWFLGDEVRGE*
Ga0075421_10069901613300006845Populus RhizosphereGMVIDKLLTDENLRIRFALDRLETVAELCLRGFDLTRDEIDLLCRTDAGVWFLRSAVSGAPQH*
Ga0075421_10072522513300006845Populus RhizosphereMSRAGVGMVVEELLTDENLRVRFALDPMEMVADLFLRGVNLTRAEIDLFRRTDPGVWFLRSALSGQPQH*
Ga0075430_10044372923300006846Populus RhizosphereMSQAGVGMVIEKLLTDEGLRIRFALDRIETIAELCLRGFELTRDELDLLYRTDVRLWFRDVRGQWLQ*
Ga0075431_10016100723300006847Populus RhizosphereMSRTSVGMVIDKLLTDENLRIRFALDRLETVAELCLRGFDLTRDEIDLLCRTDAGVWFLRSAVSGAPQH*
Ga0075431_10078000923300006847Populus RhizosphereMAIEKLLTDERLRIRFARDRMETIAELCLRGFELTRDEIDLIYRTDARLWFVSDHVRGEWLQ*
Ga0075431_10081206623300006847Populus RhizosphereMSRASVGMVIDKLLTDEHLRIRFALDRLETVAALCLGGFDLTRDEIDLLCGTDAGVWFLRSAVRGAPQQ*
Ga0075431_10081876723300006847Populus RhizosphereMSRAAVGMVVENLLTDENLRIRFAVDPMATVAELFLCGLDLTGDEIDLLSRADPGLWFLRSALEGQPLH*
Ga0075433_1121749823300006852Populus RhizosphereMSRAGVGMVVEELLTDENLRVRFALDPMETVADLFLLGVDLTRNEIDLFRRTDPGLWFLTSALSGQPQH*
Ga0075420_10161955413300006853Populus RhizosphereMSRAAVGMAVENLLTDENLRIRFAVDPMATVAELFLCGLDLTRDEVDLLCRTDPSLWFLRSALKGQPQH*
Ga0075420_10176065613300006853Populus RhizosphereMSRANVGRVVEELLADENLRIRFALDRIGAVVDLFRRGFDLSSDEIDLFYRTDACLWFMGDIAIGERPQ*
Ga0068865_10055901013300006881Miscanthus RhizosphereMSQAGVGTVIEKLLTDQNLRIRFALNQIETVAELCLRGVELTREEVDLFCWTNARLWFLGDEVEGE*
Ga0075419_1037198323300006969Populus RhizosphereMSQAGVGMVIEKLLTDQNLRIRFALNQIETVGELCLRGVELTREEVDLFCWTNARLWFLGDEVRGE*
Ga0075419_1048022023300006969Populus RhizosphereMSRAIVGMVIDKLLTDENLRIRFALDRLETIADLCLRGFDLTRDEIDLLCRTDAGVWFLRSAVTGAPQH*
Ga0111539_1025043613300009094Populus RhizosphereMVIETLLTDERLRVRFALDRIEAIAELCLRGVELTRDEIDLVCRTDVRLWFPGDHVRGEWLQ*
Ga0111539_1025099633300009094Populus RhizosphereMVVENLLTDENLRIRFAVDPMPTVAELFLCGLDLTGDEIDLLSRADPGLWFLRSALEGQPLH*
Ga0111539_1036905233300009094Populus RhizosphereMSRAAVGLVVESLLTDENLRTRFAIDPMATVAELFLCGLDLTCDEVDLLCRTDPGLWFLRSALKDQPQH*
Ga0111539_1072488533300009094Populus RhizosphereMLPWDAGQKEAGVMSQAAVGTVVENLLTNEDLRLRFALDPMDTIADLFLCGLDLTRDEIDLLCRTDPGLWFLRSALRGQPQH*
Ga0111539_1250517223300009094Populus RhizosphereMVIDKLLTDENLRIRFAIDRMETVADLCLRGFDLTRDEIDLLCRTDAGVWFLRSAVSGAPQH*
Ga0075418_1012148833300009100Populus RhizosphereMAWMLPLPGEGGEAMSQAGVGTVIEKLLTDENLRIRFALDRIETVAELCLRGVELTHTEVELFCWTNADLWFLGDEVSGEWQH*
Ga0075418_1076284633300009100Populus RhizosphereAVGMAVENLLTDENLRIRFAVDPMATVAELFLCGLDLTRDEVDLLCRTDPSLWFLRSALKGQPQH*
Ga0114129_1111981113300009147Populus RhizosphereMAVENLLTDENLRIRFAVDPMATVAELFLCGLDLTGDEIDLLSRADPGLWFLRSALEGQPLH*
Ga0114129_1264405223300009147Populus RhizosphereMSQMGVEKVVDLLLTNENLRIRFALDRIETVAELCLLGFDLSPEDVELFCWTDPRLWFGDIARGERLH*
Ga0075423_1216771313300009162Populus RhizosphereMVVEELLTDENLRVRFALEPMETVADLFLRGVDLTRNEIDLFRRTDPTVWFLSSALSGQPQH*
Ga0105248_1231670423300009177Switchgrass RhizosphereMVIEKLVTVESVRIRFALDPMETIAELCLRGFELTRDEVDLLCRTDARLWFLGDEVIGEWQH*
Ga0105249_1275717423300009553Switchgrass RhizosphereAGIMSRAAVGVVVENLLTDENLRTRFAVDPMATVAQLFLCGLDLTRDEIDLLCRTDAGLWFLRSALRGQPQH*
Ga0105347_141934113300009609SoilMVIDKLLTDENLRIRFALDRVETVAELCLRGFDLSRDEIDLLCRTDAGVWFLRSAVSGAPQH*
Ga0105347_143275113300009609SoilMVVEKLLTDESLRIQFALDRMETIAELCLRGIELTRDEIDLINRTDARLWFLGDPKCEW
Ga0105252_1060467313300009678SoilTVIEKLVTDRNLRIRFALDPIETVAELYLRGVELTRDEIDLFCRTDARLWFLDDAVRGEWQS*
Ga0105239_1167352813300010375Corn RhizosphereLLTDENLRFRFAVDPMATVAELFLCGLDLTRDEVDLLCRTDPGLWFLRSALRGQPQH*
Ga0137313_109677713300011403SoilMSQAGVGTVIEKLLTDESLRTRFALDRIETIAELCLRGADLTGDEVETLCWTNARLWFLGDEVRAECQH*
Ga0137424_110768513300011412SoilMVIGELLTDENLRIRFALDPVETIADLCLRGFDLTRDEIDLLCRTDAGVWFLRSAVSGAPQH*
Ga0137425_109109013300011422SoilMVIDKLLTDENLRIRFALDRVETVVELCLRGFDLTHDEINLLCRTDAGVWFLRSAVSGAPQH*
Ga0137455_122190913300011429SoilMVIDKLLTDENLRLRFAVDPMETVAGLFLRGFDLTRNEIDLLCRTDAGVWFLRSAVRGAPQH*
Ga0137423_106683023300011430SoilMSQAGVGTVIEKLLTDENLRIRFALDQIETVAELCLRGVELTRDEVDLFCWTNARLWFLGDEVRDEWQH*
Ga0137428_101092623300011432SoilMSQAGVGTVIEKLLTDETMRIRFALDPIETVAELCLRGVELTSDEIDLFYRTNARLWFQPDEVRSEWEH*
Ga0137458_110114713300011436SoilMSQAGVGTVIEKLLTDENLRIRFALDRIETIAELCLRGVELTGDEVETLCWTNAGLWCLGDEVGDKWQH*
Ga0120187_102905413300012015TerrestrialMVIDKLLTDENLRIRFALDRLETVADLCLRGFDLTRDEIDLLCRTDAGVWFLRSAVRGAPQH*
Ga0137322_100534033300012146SoilMVVENLLTDERLRIRFALDRMETIAELCLRGFELTRDEIDLFERTDARLWFLGDHVGGECRQ*
Ga0137353_102637613300012157SoilMSQAGVGTVIEKLLTDENLRIRFALDRIETVAELCLRGVELTGDEVETLCWTNARLWFLGDEVRDEWQH*
Ga0162653_10000935013300012937SoilMSRTSVGLVIDKLLTDENLRIRFALDRLETVAELCLRGFDLTRDEIDLLCRTDAGVWFLRSAVSGAPQH*
Ga0164303_1124726613300012957SoilMVIEKLLTDENLRIRFAFDRDETIAELCLRGFDLNPGEIDLLYRTDAGLWFLKSALRGATQQ*
Ga0157374_1159374923300013296Miscanthus RhizosphereMVLETMVTVESVRMQFALDPMETIADLCLRGFELTHDEVDLLCRTDARLWFLGDEVIGEWQH*
Ga0163162_1005038533300013306Switchgrass RhizosphereVIDKLLTDEALRVEFALDRMETVAELWLRGAELTRDEVELLCLTDARLWLVGEEVRGEWQQ*
Ga0075311_112279613300014259Natural And Restored WetlandsTPRGGSVMSQHTVGVVIDKLLTDDDLRIRFVIDRMKTLAELCLRGFELSPNEIDLFCRTDARLWF*
Ga0157380_1303996923300014326Switchgrass RhizosphereQAGVGTVIEKLLTDENLRIRFALDQMETVAELCLRGVELTREEVDLFCWTNARLWFLGDEVRGE*
Ga0180088_103301013300014868SoilMSQAGVGTAIEKLLTDESLRIRFALDRIETVAELCLRGVELTRDEVDLFCRTDARLWFLGDTVRTEWQH*
Ga0157376_1102435613300014969Miscanthus RhizosphereIVIDKLLTDEALRVEFALDRMETVAELWLRGAELTRDEVELLCLTDARLWLVGEEVRGEWQQ*
Ga0180093_114712323300015258SoilMSQIGKVIDKLLTDENLRIRFALDRVETVAELCLRGFDLTRDEIDLLCRTDAGVWFLRSAVRGAPQH*
Ga0132258_1002269223300015371Arabidopsis RhizosphereMVIEKLITVESVRLRFALDPMETIAELCLRGFDLTRDEIELLCRTDARLWFLGDEVIGEWQH*
Ga0132258_1011048523300015371Arabidopsis RhizosphereMLPETRGRFKEDAMSRIGVGMVIEKLLTEQDLRVRFALDPIETVAELFLRGFDLTRDEADLFCRTDAGLWFLRSAVSGAPQH*
Ga0132258_1222424833300015371Arabidopsis RhizosphereMSRAAVGLVVENLLTDENLRFRFAIDPMATVAELFLCGLDLTCDEVDLLCRTDPGLWFLRSALKGQPQH*
Ga0132258_1268501823300015371Arabidopsis RhizosphereELLTDEDLRVRFALDPMETVADLFLRGVDLTRNEIDLFGRTDPGVWFLRRALSGQPQH*
Ga0132255_10063255413300015374Arabidopsis RhizosphereKEAGVMSRAGVGMVVEELLTDENLRVRFALDPMETVADLFLRGVDLTRNEIDLFRRTDPSLWFLTSALSGQPQH*
Ga0163161_1014836023300017792Switchgrass RhizosphereMSQAGVGTVIDKLLTDKNLRIRFALDQLETVAELCLRGVELTRDEVDLFCWTNARLWFLGDEVRCE
Ga0163161_1135386013300017792Switchgrass RhizosphereMSRAGVGMVVEELLTDENLRVRFALDPAETVADLFLRGVDLTRNEIDLFRRTDPSLWFLTSVLSGQPQT
Ga0163161_1158820913300017792Switchgrass RhizosphereMSQAGVGTVIEKLLTDQNLRIRFALNQIETVAELCLRGVELTREEVDLFCWTNARLWFLGDE
Ga0184626_1001276943300018053Groundwater SedimentMSRASVGMVIDKLLTDENLRIRFALDRLETVAELCLRGLDLTRDEIDLLCRTDAGVWFLRSAVTGAPQH
Ga0184611_111384713300018067Groundwater SedimentMSRAAVGLVVENLLTDENLRTRFAVDPMATVAELFLRGLDLTRDEIDLLCRTDAGLWFLRSALTGQPQH
Ga0184628_1000051183300018083Groundwater SedimentMSQVGVGTVIEKLLTEETLRIRFALNRLETVAELCLQGIELSRDEVDLFCRTNARLWFLLDEASSGWLH
Ga0184629_1043814823300018084Groundwater SedimentMSRSIVGMVIDKLLTDENLRIRFALDRVETVAELCLRGFDLTRDEIDLLCRTDAGVWFLRSAVRGAPQH
Ga0190270_1052728023300018469SoilMSRSIVGMVIEKLLTDENLRLRFALDRVETVAELCLRGFDLTRDEIDLLYRTDAGVWFLRSALRGAPQH
Ga0190270_1212252523300018469SoilMSRSIVGMVIDKLLTDENLRLRFALDRVETVVELCLRGFDLTGDEIDLLCRTDAGVWFLRSAVSGAPQH
Ga0190274_1072267813300018476SoilMSRPGVGMVIETLVTVESVRIRFALDPLETIAELCLRGFELTRDEVDLLCRTDARLWLLGDEIIGEWQH
Ga0190274_1332258213300018476SoilMSRAGVGMVIEKLLTDEGLRMRFALDRMETIAELYLRGFELTGDEIDLFDRSDARLWFLGDRVRNEWQR
Ga0190271_1023012723300018481SoilMSRSIVGMVIEKLLTDENLRIRFALDRVETVAELCLRGFDLTRDEIDLLCRTDAGVWFLRSAVRGAPQH
Ga0190271_1178698823300018481SoilMSRRSVGLVVEKLLTDENLRLRFAIDRTETIAELCLRGVELTRDEIDLFCGTDARLWFLIDQRGLSQQ
Ga0190271_1306153113300018481SoilMSRANVGMVIDKLLTDENLRLRFALDRVETVVELCLRGFDLTGDEIDLLCRTDAGVWFLRSAVSGAPQH
Ga0173481_1063089213300019356SoilMSRAGVGMVIEKLVTDENLRIRFAVDRIDTVAEIFLRGFDLSQDELDLFCRTDAGLWFLSELAIGEPQH
Ga0190264_1177673813300019377SoilMSRVNVGLVIDQLLTDEHLGIRFALDRLETVAELCLRGFDLTRDEIDLLCRTDAGVWFLRSAVSGAPQH
Ga0210379_1000741513300021081Groundwater SedimentMSRANVGMVIDKLLTDENLRLRFAVDPMETVAGLFLRGFDLTRNEIDLLCRTDAGVWFLRSAVRGAPQH
Ga0207697_1000707333300025315Corn, Switchgrass And Miscanthus RhizosphereMSRVGVGIVIDKLLTDEALRVEFALDRMETVAELCLRGAELTRDEVELLCLTDARLWLVGEEVRGEWQQ
Ga0207697_1013075823300025315Corn, Switchgrass And Miscanthus RhizosphereMSQAGVGTVIEKLLTDENLRIRFALDQMETVAELCLRGVELTREEVDLFCWTNARLWFLGDEVRGE
Ga0207680_1002296423300025903Switchgrass RhizosphereMSRVGVGIVIDKLLTDEALRVEFALDRMETVAELWLRGAELTRDEVELLCLTDARLWLVGEEVRGEWQQ
Ga0207680_1005424333300025903Switchgrass RhizosphereMSQAGVGTVIEKLLTDQNLRIRFALNQIETVAELCLRGVELTREEVDLFCWTNARLWFLGDEVGGE
Ga0207645_1005678013300025907Miscanthus RhizosphereMSQAGVGTVIEKLLTDQNLRIRFALNQIETVAELCLRGVELTREEVDLFCWTNARLWFLGDAVGGE
Ga0207645_1020191723300025907Miscanthus RhizosphereGVGTVIDKLLTDKNLRIRFALDQLETVAELCLRGVELTRDEVDLFCWTNARLWFLGDEVRGE
Ga0207643_1000404033300025908Miscanthus RhizosphereMSQAGVGTVIDKLLTDKNLRIRFALDQLETVAELCLRGVELTRDEVDLFCWTNARLWFLGDEVRGE
Ga0207681_1061688413300025923Switchgrass RhizosphereMSRVGVGIVIDKLLTDEALRVEFALDRMETVAELWLRGAELTRDEVELLCLTDARLWLVGEEVRG
Ga0207681_1063242313300025923Switchgrass RhizosphereMSQAGVGTVIEKLLTDQNLRIRFALNQIETVAELCLRGVELTREEVDLFCWTNARLWFLGDEVRGE
Ga0207701_1086338623300025930Corn, Switchgrass And Miscanthus RhizosphereMSRIGVGMVIEKLLTEQDLRVRFALDPIETVAELFLRGFDLTRDEADLFCRTDAGLWFLRSAVSGAPQH
Ga0207644_1017223813300025931Switchgrass RhizosphereMSRVGVGIVIDKLLTDEALRVEFALDRMETVAELWLRGAELTRDEVELLCLTDARLWLVGEEVRGEWQH
Ga0207644_1175641013300025931Switchgrass RhizosphereMSRAGVGTVIEKLLTDKCLRIRFALDRIETIAELYLGGFELTRDEIDLFCRTDARLWFLGDNVRGEGQH
Ga0207711_1111238223300025941Switchgrass RhizosphereMSRPGVGMVIEKLVTVESVRIRFALDPMETIAELCLRGFELTRDEVDLLCRTDARLWFLGDEVIGE
Ga0207668_1037046023300025972Switchgrass RhizosphereMSQAGVGTVIEKLLTDENLRIRFALDQMETVAELCLRGVELTREEVDLFCWTNARLWFLGDEVGGE
Ga0207658_1154054523300025986Switchgrass RhizosphereMSQAGVGTVIEKLLTDKNLRIRFALDQLETVAELCLRGVELTRDEVDLFCWTNARLWFLGDEVRGE
Ga0207703_1054704723300026035Switchgrass RhizosphereMSQAGVGTVIDKLRTDKNLRIRFALDQLETVAELCLRGVELTRDEVDLFCWTNARLWFLGDEVRGE
Ga0207675_10116648423300026118Switchgrass RhizosphereMSRAAVGLVVENLLTDENLRTQFAVDPVATVAELFLGGLDLTRDEIDLLCRTDAALWFLRSALRGQPQ
Ga0207698_1063862433300026142Corn RhizosphereSRVGVGIVIDKLLTDEALRVEFALDRMETVAELCLRGAELTRDEVELLCLTDARLWLVGEEVRGEWQQ
Ga0209481_1036282613300027880Populus RhizosphereMSRVNVGLVIDKLLTDENLRIRFALDRLETVAELYLRGFDLTRDEIDLLCRTDAGVWFLRSAVSGAPLH
Ga0207428_1075941713300027907Populus RhizosphereMSRAAVGLVVESLLTDENLRTRFAIDPMATVAELFLCGLDLTCDEVDLLCRTDPGLWFLRSALRGQPQH
Ga0209382_10007490123300027909Populus RhizosphereMSRASVGMVIDKLLTDEHLRIRFALDRLETVAALCLGGFDLTRDEIDLLCGTDAGVWFLRSAVRGAPQH
Ga0209382_1005093543300027909Populus RhizosphereMSQAGVGMVIEKLLTDERLRIRFARDRMETIAELCLRGFELTRDEIDLIYRTDARLWFVSDHVRGEWLQ
Ga0209382_1012500833300027909Populus RhizosphereMSRASVGMVIDKLLTDENLRIRFALDRLETVAELCLRGFDLTRDEIDLLCRTDAGVWFLRSAVSGAPQH
Ga0209382_1015813233300027909Populus RhizosphereMSQAGVGTVIEKLLTDQNLRIRFALNQIETVGELCLRGVELTREEVDLFCWTNARLWFLGDEVRGE
Ga0209382_1110348113300027909Populus RhizosphereMSRAGVGMVVEELLTDENLRVRFALDPMEMVADLFLRGVNLTRAEIDLFRRTDPGVWFLRSALSGQPQH
Ga0209382_1132922423300027909Populus RhizosphereVDVALGAGQKEAGVMSRAAVGMAVENLLTDENLRIRFAVDPMATVAELFLCGLDLTRDEVDLLCRTDPSLWFLRSALKGQPQH
Ga0247828_1047061913300028587SoilMSRTGIGMVIDKLLTDENLRMRFALDRIETVAELCLRGFDLSPDEIDLFCRTDAGLWFLRSAVSGAPQQ
Ga0268386_1053925623300030619SoilMSQTVVGKVVEQLLTDENLRLRFALDRIETVAELCLRGFDLSREDIDLFCRTDARVWCLDDIAGGERPH
Ga0299914_10000900103300031228SoilMSRASVGMVIDKLLTDENLRIRFALDPIETVAELFLRGFDLTRDEIDLLCRTDAGVWFLRSTVRGAPQH
Ga0310888_1071172913300031538SoilMSRTIVGMVIDKLLTDENLRIRFAIDRMETVADLCLRGFDLTRDEIDLLCRTDAGVWFLRSAVSGAPQH
Ga0310887_1074349223300031547SoilMSRAAVGMAVENLLTDENLRTRFAVDPMATVAELFLRGIDLTRDEIDLLCRTDAALWFLRSALSGQPQH
Ga0310887_1075394513300031547SoilMSRAAVGMVVENLLTDENLRIRFAVDPMATVAELFLCGLDLTGDEIDLLSRADPGLWFLRSALEGQPLH
Ga0310904_1092768813300031854SoilMSRAAVGMAVENLLTDENLRTRFAVDPMATVAELFLRGLDLTRDEIDLLCRTDAALWFLRSALSGQPQH
Ga0310892_1003462623300031858SoilMSQAGVGTVIDKLLTDKNLRIRFAIDQLETVAELCLRGVELTRDEVDLFCWTNARLWFLGDEVRGE
Ga0310892_1026568033300031858SoilMSRAAVGMVVENLLTDENLRIRFAVDPMATVAELFLRGLDLTRDEIDLLCRTDAALWFLRSALSGQPQH
Ga0310893_1001835313300031892SoilMSQAGVGTVIDKLLTDKNLRIRFALDQIETVAELCLRGVELTRDEVDLFCWTNARLWFLGDEVRGE
Ga0307406_1085551923300031901RhizosphereMSRAGVGMVIEKLLTDERLRIEFALDRMETIAELCLRGFDLTRDEVDLISRADARLWFLGDQVSGEWLQ
Ga0310900_1036377323300031908SoilASVGMVIDNLLTDENLRIRFAVDPIETVAALFLRGFDLTRDEIDLLCRTDAGVWFLRSAVTGAPLH
Ga0310884_1045976913300031944SoilRYSSEGGEAMSQAGVGTVIDKLLTDKNLRIRFALDQLETVAELCLRGVELTRDEVDLFCWTNARLWFLGDEVRGE
Ga0310902_1034416623300032012SoilMSRAAVGMVVENLLTDENLRTRFAVDPMATVAELFLRGIDLTRDEIDLLCRTDAALWFLRSALSGQPQH
Ga0310906_1087589813300032013SoilMSRASVGRIVENLLTDENLRIRFAIDRMETIAELCLRGFELTRDEIELFRQTDARLWFGMDQRGRCQQ
Ga0310890_1045190723300032075SoilVLLARRGVDVAVAQCRSEGGDVMSRASVGMVIDNLRIRFAVDPIETVAALFLRGFDLTRDEIDLLCRTDAGVWFLRSAVTGAPLH
Ga0310896_1010926613300032211SoilMSRAAVGMAVENLLTDENLRIRFAVDPMATVAELFLRGLDLTRDEIDLLCRTDAALWFLRSALSGQPQH
Ga0247830_1004990133300033551SoilMSRAGVGMVIEKLLTDEGLRIRFALDRIETIAELCLSGFELTRDELDLIYRTDVHLWFRDHVRGQWLQ
Ga0364945_0000239_13519_137073300034115SedimentMVIDKLLTDENLRLRFAVDPMETVAGLFLRGFDLTRNEIDLLCRTDAGVWFLRSAVRGAPQH
Ga0364929_0020498_2_1843300034149SedimentIDKLLTDENLRIRFALDRVETVAELCLRGFDLTRDEIDLLCRTDAGVWFLRSAVRGAPQH
Ga0364929_0062384_451_6393300034149SedimentMVFDKLLTDENLRLRFAVDPMETVAGLFLRGFDLTRNEIDLLCRTDAGVWFLRSAVRGAPQH
Ga0364933_041923_31_2193300034150SedimentMVVEELLTDENLRARFALEPMETVADLFLRGVDLTHNEIDLFRRTDPGVWFLRSALSSQPQH
Ga0364943_0107156_26_2143300034354SedimentMVVEELLTDENLRVRFALDPMETVADLFLRGVDLTRNEIDLFRRTDPGVWFLRSALSGQPQH
Ga0364941_216722_327_5003300034417SedimentLLTDENLRARFALEPMETVADLFLRGVDLTRNEIDLFRRTDPGVWFLRSALSGQPQH


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.