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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F033059 |
| Family Type | Metagenome |
| Number of Sequences | 178 |
| Average Sequence Length | 67 residues |
| Representative Sequence | MSRASVGMVIDKLLTDENLRIRFALDRLETVAELCLRGFDLTRDEIDLLCRTDAGVWFLRSAVSGAPQH |
| Number of Associated Samples | 115 |
| Number of Associated Scaffolds | 178 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | No |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 82.02 % |
| % of genes near scaffold ends (potentially truncated) | 20.22 % |
| % of genes from short scaffolds (< 2000 bps) | 79.78 % |
| Associated GOLD sequencing projects | 102 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.66 |
| Hidden Markov Model |
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| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (61.236 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (21.910 % of family members) |
| Environment Ontology (ENVO) | Unclassified (36.517 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (61.236 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 52.58% β-sheet: 0.00% Coil/Unstructured: 47.42% | Feature Viewer |
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| Powered by Feature Viewer | |||||
| Structure Viewer | |
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| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.66 |
| Powered by PDBe Molstar | |
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| Pfam ID | Name | % Frequency in 178 Family Scaffolds |
|---|---|---|
| PF02954 | HTH_8 | 7.87 |
| PF13564 | DoxX_2 | 7.87 |
| PF07992 | Pyr_redox_2 | 3.37 |
| PF00324 | AA_permease | 1.69 |
| PF02861 | Clp_N | 1.69 |
| PF00072 | Response_reg | 1.12 |
| PF13620 | CarboxypepD_reg | 1.12 |
| PF01609 | DDE_Tnp_1 | 1.12 |
| PF13590 | DUF4136 | 1.12 |
| PF12840 | HTH_20 | 0.56 |
| PF12704 | MacB_PCD | 0.56 |
| PF02687 | FtsX | 0.56 |
| PF07883 | Cupin_2 | 0.56 |
| PF00881 | Nitroreductase | 0.56 |
| PF07730 | HisKA_3 | 0.56 |
| PF13365 | Trypsin_2 | 0.56 |
| PF03358 | FMN_red | 0.56 |
| PF03734 | YkuD | 0.56 |
| PF00561 | Abhydrolase_1 | 0.56 |
| PF07676 | PD40 | 0.56 |
| PF07494 | Reg_prop | 0.56 |
| PF03219 | TLC | 0.56 |
| PF00005 | ABC_tran | 0.56 |
| PF07724 | AAA_2 | 0.56 |
| PF11937 | DUF3455 | 0.56 |
| PF05598 | DUF772 | 0.56 |
| PF00162 | PGK | 0.56 |
| PF13561 | adh_short_C2 | 0.56 |
| PF00873 | ACR_tran | 0.56 |
| COG ID | Name | Functional Category | % Frequency in 178 Family Scaffolds |
|---|---|---|---|
| COG0531 | Serine transporter YbeC, amino acid:H+ symporter family | Amino acid transport and metabolism [E] | 1.69 |
| COG0542 | ATP-dependent Clp protease, ATP-binding subunit ClpA | Posttranslational modification, protein turnover, chaperones [O] | 1.69 |
| COG0833 | Amino acid permease | Amino acid transport and metabolism [E] | 1.69 |
| COG1113 | L-asparagine transporter or related permease | Amino acid transport and metabolism [E] | 1.69 |
| COG1115 | Na+/alanine symporter | Amino acid transport and metabolism [E] | 1.69 |
| COG5659 | SRSO17 transposase | Mobilome: prophages, transposons [X] | 1.12 |
| COG5433 | Predicted transposase YbfD/YdcC associated with H repeats | Mobilome: prophages, transposons [X] | 1.12 |
| COG5421 | Transposase | Mobilome: prophages, transposons [X] | 1.12 |
| COG3385 | IS4 transposase InsG | Mobilome: prophages, transposons [X] | 1.12 |
| COG3293 | Transposase | Mobilome: prophages, transposons [X] | 1.12 |
| COG3039 | Transposase and inactivated derivatives, IS5 family | Mobilome: prophages, transposons [X] | 1.12 |
| COG3292 | Periplasmic ligand-binding sensor domain | Signal transduction mechanisms [T] | 0.56 |
| COG3202 | ATP/ADP translocase | Energy production and conversion [C] | 0.56 |
| COG3850 | Signal transduction histidine kinase NarQ, nitrate/nitrite-specific | Signal transduction mechanisms [T] | 0.56 |
| COG3851 | Signal transduction histidine kinase UhpB, glucose-6-phosphate specific | Signal transduction mechanisms [T] | 0.56 |
| COG4564 | Signal transduction histidine kinase | Signal transduction mechanisms [T] | 0.56 |
| COG4585 | Signal transduction histidine kinase ComP | Signal transduction mechanisms [T] | 0.56 |
| COG3034 | Murein L,D-transpeptidase YafK | Cell wall/membrane/envelope biogenesis [M] | 0.56 |
| COG1376 | Lipoprotein-anchoring transpeptidase ErfK/SrfK | Cell wall/membrane/envelope biogenesis [M] | 0.56 |
| COG0126 | 3-phosphoglycerate kinase | Carbohydrate transport and metabolism [G] | 0.56 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 61.24 % |
| All Organisms | root | All Organisms | 38.76 % |
| Visualization |
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| Powered by ApexCharts |
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| Habitat | Taxonomy | Distribution |
| Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 21.91% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 8.43% |
| Soil | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil | 7.87% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 6.18% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 6.18% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 5.62% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 5.62% |
| Arabidopsis Thaliana Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere | 4.49% |
| Sediment | Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment | 3.37% |
| Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 2.25% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere | 2.25% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 2.25% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere | 2.25% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 2.81% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 2.81% |
| Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere | 1.69% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 1.69% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 1.12% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere | 1.12% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 1.12% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere | 1.12% |
| Groundwater Sediment | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment | 0.56% |
| Terrestrial | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial | 0.56% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere | 0.56% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil | 0.56% |
| Natural And Restored Wetlands | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands | 0.56% |
| Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere | 0.56% |
| Soil | Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil | 0.56% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 0.56% |
| Tabebuia Heterophylla Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere | 0.56% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere | 0.56% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere | 0.56% |
| Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere | 0.56% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 0.56% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.56% |
| Visualization |
|---|
| Powered by ApexCharts |
| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 2088090014 | Soil microbial communities from Great Prairies - Iowa, Native Prairie soil | Environmental | Open in IMG/M |
| 2162886012 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 | Host-Associated | Open in IMG/M |
| 2228664021 | Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil | Environmental | Open in IMG/M |
| 3300000033 | Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil | Environmental | Open in IMG/M |
| 3300000364 | Soil microbial communities from Great Prairies - Iowa, Native Prairie soil | Environmental | Open in IMG/M |
| 3300000955 | Soil microbial communities from Great Prairies - Iowa, Native Prairie soil | Environmental | Open in IMG/M |
| 3300004114 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5 | Environmental | Open in IMG/M |
| 3300004156 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1 | Environmental | Open in IMG/M |
| 3300004157 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2 | Environmental | Open in IMG/M |
| 3300004463 | Combined assembly of Arabidopsis thaliana microbial communities | Host-Associated | Open in IMG/M |
| 3300004479 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs | Environmental | Open in IMG/M |
| 3300004480 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4 | Environmental | Open in IMG/M |
| 3300005093 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks | Environmental | Open in IMG/M |
| 3300005293 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 | Host-Associated | Open in IMG/M |
| 3300005294 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil | Environmental | Open in IMG/M |
| 3300005295 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 | Environmental | Open in IMG/M |
| 3300005328 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG | Host-Associated | Open in IMG/M |
| 3300005335 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG | Host-Associated | Open in IMG/M |
| 3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Environmental | Open in IMG/M |
| 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Host-Associated | Open in IMG/M |
| 3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Host-Associated | Open in IMG/M |
| 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Host-Associated | Open in IMG/M |
| 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Host-Associated | Open in IMG/M |
| 3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Host-Associated | Open in IMG/M |
| 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Host-Associated | Open in IMG/M |
| 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Host-Associated | Open in IMG/M |
| 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Host-Associated | Open in IMG/M |
| 3300006049 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 | Host-Associated | Open in IMG/M |
| 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Host-Associated | Open in IMG/M |
| 3300006844 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Host-Associated | Open in IMG/M |
| 3300006845 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 | Host-Associated | Open in IMG/M |
| 3300006846 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Host-Associated | Open in IMG/M |
| 3300006847 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Host-Associated | Open in IMG/M |
| 3300006852 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 | Host-Associated | Open in IMG/M |
| 3300006853 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4 | Host-Associated | Open in IMG/M |
| 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Host-Associated | Open in IMG/M |
| 3300006969 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 | Host-Associated | Open in IMG/M |
| 3300009094 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) | Host-Associated | Open in IMG/M |
| 3300009100 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2 | Host-Associated | Open in IMG/M |
| 3300009147 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) | Host-Associated | Open in IMG/M |
| 3300009162 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2 | Host-Associated | Open in IMG/M |
| 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Host-Associated | Open in IMG/M |
| 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Host-Associated | Open in IMG/M |
| 3300009609 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890 | Environmental | Open in IMG/M |
| 3300009678 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100 | Environmental | Open in IMG/M |
| 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Host-Associated | Open in IMG/M |
| 3300011403 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT166_2 | Environmental | Open in IMG/M |
| 3300011412 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT620_2 | Environmental | Open in IMG/M |
| 3300011422 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT640_2 | Environmental | Open in IMG/M |
| 3300011429 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT600_2 | Environmental | Open in IMG/M |
| 3300011430 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT600_2 | Environmental | Open in IMG/M |
| 3300011432 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT718_2 | Environmental | Open in IMG/M |
| 3300011436 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT642_2 | Environmental | Open in IMG/M |
| 3300012015 | Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C3.rep1 | Environmental | Open in IMG/M |
| 3300012146 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT400_2 | Environmental | Open in IMG/M |
| 3300012157 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT760_2 | Environmental | Open in IMG/M |
| 3300012937 | Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t5i015 | Environmental | Open in IMG/M |
| 3300012957 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG | Environmental | Open in IMG/M |
| 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Host-Associated | Open in IMG/M |
| 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Host-Associated | Open in IMG/M |
| 3300014259 | Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailB_D1 | Environmental | Open in IMG/M |
| 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Host-Associated | Open in IMG/M |
| 3300014868 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT830_16_10D | Environmental | Open in IMG/M |
| 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Host-Associated | Open in IMG/M |
| 3300015258 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT45_16_1Da | Environmental | Open in IMG/M |
| 3300015371 | Combined assembly of cpr5 and col0 rhizosphere and soil | Host-Associated | Open in IMG/M |
| 3300015374 | Col-0 rhizosphere combined assembly | Host-Associated | Open in IMG/M |
| 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Host-Associated | Open in IMG/M |
| 3300018053 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1 | Environmental | Open in IMG/M |
| 3300018067 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex | Environmental | Open in IMG/M |
| 3300018083 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1 | Environmental | Open in IMG/M |
| 3300018084 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1 | Environmental | Open in IMG/M |
| 3300018469 | Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T | Environmental | Open in IMG/M |
| 3300018476 | Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T | Environmental | Open in IMG/M |
| 3300018481 | Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T | Environmental | Open in IMG/M |
| 3300019356 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2) | Environmental | Open in IMG/M |
| 3300019377 | Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T | Environmental | Open in IMG/M |
| 3300021081 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo | Environmental | Open in IMG/M |
| 3300025315 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025903 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025908 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025923 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025930 | Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) | Environmental | Open in IMG/M |
| 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300027880 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300027907 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300027909 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300028587 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3 | Environmental | Open in IMG/M |
| 3300030619 | Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq) | Environmental | Open in IMG/M |
| 3300031228 | Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57 | Environmental | Open in IMG/M |
| 3300031538 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1 | Environmental | Open in IMG/M |
| 3300031547 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4 | Environmental | Open in IMG/M |
| 3300031854 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1 | Environmental | Open in IMG/M |
| 3300031858 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2 | Environmental | Open in IMG/M |
| 3300031892 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2 | Environmental | Open in IMG/M |
| 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Host-Associated | Open in IMG/M |
| 3300031908 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1 | Environmental | Open in IMG/M |
| 3300031944 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1 | Environmental | Open in IMG/M |
| 3300032012 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3 | Environmental | Open in IMG/M |
| 3300032013 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3 | Environmental | Open in IMG/M |
| 3300032075 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3 | Environmental | Open in IMG/M |
| 3300032211 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1 | Environmental | Open in IMG/M |
| 3300033551 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5 | Environmental | Open in IMG/M |
| 3300034115 | Sediment microbial communities from East River floodplain, Colorado, United States - 29_s17 | Environmental | Open in IMG/M |
| 3300034149 | Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17 | Environmental | Open in IMG/M |
| 3300034150 | Sediment microbial communities from East River floodplain, Colorado, United States - 25_j17 | Environmental | Open in IMG/M |
| 3300034354 | Sediment microbial communities from East River floodplain, Colorado, United States - 23_s17 | Environmental | Open in IMG/M |
| 3300034417 | Sediment microbial communities from East River floodplain, Colorado, United States - 17_s17 | Environmental | Open in IMG/M |
| Geographical Distribution | |
|---|---|
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| Protein ID | Sample Taxon ID | Habitat | Sequence |
| GPIPI_03341840 | 2088090014 | Soil | MVIEKLLTDVNLRNRFALDRMETVAELFLRGFDLSEDEIELFSRTDADLWFLDEPVRGERWH |
| MBSR1b_0426.00001520 | 2162886012 | Miscanthus Rhizosphere | VIDKLLTDEALRVEFALDRMETVAELWLRGAELTRDEVELLCLTDARLWLVGEEVRGEWQ |
| ICCgaii200_05350622 | 2228664021 | Soil | MSRASVGIVIDKLLTDENLRIRFALDRLETVAELCLRGFDLTRDEIDLLCRTDAGVWFLRSAVRGAPEH |
| ICChiseqgaiiDRAFT_06877983 | 3300000033 | Soil | MSQAGVGMVIEKLLTDEGLRIRFALDRIETIAELCLSGFELTRDELDLIYRTDVRLWFRDHVRGQWLQ* |
| INPhiseqgaiiFebDRAFT_1014059422 | 3300000364 | Soil | MSQTGVGQVVEQLLTDENLRIQFALDRIETVANLCLRGFDLSREDIDLFCRTDARLWFFGDMARGERPQ* |
| INPhiseqgaiiFebDRAFT_1015325783 | 3300000364 | Soil | MSRAGVGMVVEELLTDENLRVRFALDPMETVADLFLRGVDLTRNEIDLFRRTDPGVWFLRSALSGQPHH* |
| INPhiseqgaiiFebDRAFT_1015350831 | 3300000364 | Soil | MSRAGVGMVVEELLTDENLRVRFALDPMETVADLFLRGVDLTRNEIDLFRRTDPSLWFLTSALSGQPQH* |
| INPhiseqgaiiFebDRAFT_1052823342 | 3300000364 | Soil | MSRAGVEMVVGKLLTDEGLRLQFALNPTETVIELVLRGFDLTRDEIDLFCRTDAGLWFLRSAVKGAPQH* |
| INPhiseqgaiiFebDRAFT_1052882501 | 3300000364 | Soil | MSRAGVEMVVGKLLTDEGLRLQFALNPTETVIELVLRGFDLTRDEIDLFCRTDAGLWFLRSAVKGAPRH* |
| INPhiseqgaiiFebDRAFT_1052900981 | 3300000364 | Soil | GDAMSRAGVEMVVGTLLTDENLRLQFALNPTETVIELVLRGFDLTPDEIDLFCRTDAGLWFLRSAVKGAPRH* |
| JGI1027J12803_1021241923 | 3300000955 | Soil | MSRASVGMVIDKLLTDETLRMRFAVDPMETVAELFLRGFDFTRDEIDLLCRTDASVWFLRSAVEGAPQH* |
| JGI1027J12803_1030444452 | 3300000955 | Soil | MSRGGVGMVIEKLLTDVNLRNRFALDRMETVAELFLRGFDLSEDEIELFSRTDADLWFLDEPVRGERWH* |
| Ga0062593_1009482931 | 3300004114 | Soil | MSRAAVGMAVENLLTDETLRIRFAVDPMATVAELFLCGLDLTRDEVDLLCRTDPGLWFLRSALLGQPQH* |
| Ga0062593_1010496291 | 3300004114 | Soil | MSRAGVGMVIEKLVTDENLRIRFAVDRIDTVAEIFLRGFDLSQDELDLFCRTDAGLWFLSELAIGEPQH* |
| Ga0062589_1007146542 | 3300004156 | Soil | MSRAGVGLVIEKLLTDENLRNRFALDRMETVAEMFLWGVDLGPAEIDLFCRTDPALWFLGELVTGERQH* |
| Ga0062589_1011907451 | 3300004156 | Soil | MSQAAVGTVVENLLTNEDLRLRFALDPMDTIADLFLCGLDLTRDEIDLLCRTDPGLWFLRSALRGQPQH* |
| Ga0062590_1007076211 | 3300004157 | Soil | MSRAGVGMVIEKLVTDEDLRICFALDRMETLVELCLRGLDLTGDEIDLFCRTDPGVWSLSKTVGGVV* |
| Ga0063356_1000205854 | 3300004463 | Arabidopsis Thaliana Rhizosphere | MSRVGVGIVIDKLLTDEALRVEFALDRIETVAELCLRGAELTRDEVELLCLTDARLWLVGEEVRGEWQQ* |
| Ga0063356_1000621974 | 3300004463 | Arabidopsis Thaliana Rhizosphere | MSRVGVGMVIEKLLADENLRIRFALDRMETLAELFLRGFDLSQDEIELFSWADADLWFLSEPVRGERQH* |
| Ga0063356_1001739894 | 3300004463 | Arabidopsis Thaliana Rhizosphere | MSQAGVGTVIEKLLTDENLRIRFALDRIETVAELCLRGVELTHTEVELFCWTNADLWFLGDEVSGEWQH* |
| Ga0063356_1001942113 | 3300004463 | Arabidopsis Thaliana Rhizosphere | MSRTGVKLVIETLLTDESVRIRLALDRTETMAELCLRGFELTREEMDLFTRTDARLWFLGDRFGNEWRQ* |
| Ga0063356_1003747813 | 3300004463 | Arabidopsis Thaliana Rhizosphere | MPRAIVGIVVEKLFSDENLRIQFALDPMETIAELCLRGFELTRDEIDLFCRTDARLWFTVDQVRGTWH* |
| Ga0063356_1018846881 | 3300004463 | Arabidopsis Thaliana Rhizosphere | MSQAGVGTVIEKLLTDKNLRIRFALDQLETVAELCLRGVELTRDEVDLFCWTNARLWFLGDEVRGE* |
| Ga0063356_1026597932 | 3300004463 | Arabidopsis Thaliana Rhizosphere | VEELLTDENLRVRFALEPMETVAELFLRGVDLTRHEIDLFRRTDPTVWFLSSALSGQPQH |
| Ga0063356_1035139032 | 3300004463 | Arabidopsis Thaliana Rhizosphere | MVIEKLLTDERLRVEFALDRMETIAELCLRGFELTRDEVDLISRTDARLWFLADRVGGECLQ* |
| Ga0062595_1003344572 | 3300004479 | Soil | MSRAAVGMVVEELLTDENLRVRFALEPMETVAELFLRGVDLTRHEIDLFRRTDPTVWFLSSALSGQPQH* |
| Ga0062592_1003259281 | 3300004480 | Soil | MSQAAVGMVIEKLLTDENLRIRFALDRMETVAELFLRGFDLSQDEIELFSRTDADLWFLGEPVRGERQH* |
| Ga0062592_1019645321 | 3300004480 | Soil | MSRAGVGMVIEKLLTDERLRVDFALDRMETIAELCLRGFELTRDEIDLISRTDARLWFLGDQV |
| Ga0062594_1006870242 | 3300005093 | Soil | MSQAGVGTVIDKLLTDKNLRIRFALDQLETVAELCLRGVELTRDEVDLFCWTNARLWFLGDEVRGE* |
| Ga0062594_1033306021 | 3300005093 | Soil | GEAMSQAGVGTVIEKLLTDENLRIRFALDQMETVAELCLRGVELTREEVDLFCWTNARLWFLGDEVRGE* |
| Ga0065715_100919493 | 3300005293 | Miscanthus Rhizosphere | MSRVGVGIVIDKLLTDEALRVEFALDRMETVAELWLRGAELTRDEVELLCLTDARLWLVGEEVRGEWQQ* |
| Ga0065715_101309672 | 3300005293 | Miscanthus Rhizosphere | MSQAGVGTVIEKLLTDENLRIRFALDQMETVAELCLRGVELTREEVDLFCWTNARLWFLGDEVRGE* |
| Ga0065715_107841682 | 3300005293 | Miscanthus Rhizosphere | MSRAAVGLVVESLLTDENLRTRFAIDPMATVAELFLCGLDLTCDEVDLLCRTDPGLWFLRSALKGQPQH* |
| Ga0065705_103262221 | 3300005294 | Switchgrass Rhizosphere | MSRAGVGMVIEKLLTDENVRICFALDRMETLVELCLRGLDLTGDEIDLFCRTDPGVWSPSKTVGSAV* |
| Ga0065705_104270941 | 3300005294 | Switchgrass Rhizosphere | MSRAGVGMVIEKLLTDEKLRIRFALDRMETVAELFLRGFDLSQDDIDLFFRTDAGLWFLDDTVRGERQQ* |
| Ga0065707_111735711 | 3300005295 | Switchgrass Rhizosphere | MSRAGVGMVIEKLLTDEKLRIRFALDRMETVAELFLRGFDLSQDDIDLFFRTDAGLWFLDDTVR |
| Ga0070676_101553711 | 3300005328 | Miscanthus Rhizosphere | MSQAGVGTVIDKLRTDKNLRIRFALDQLETVAELCLRGVELTRDEVDLFCWTNARLWFLGDEVRGE* |
| Ga0070666_100536932 | 3300005335 | Switchgrass Rhizosphere | MSQAGVGTVIEKLLTDQNLRIRFALNQIETVAELCLRGVELTREEVDLFCWTNARLWFLGDEVGGE* |
| Ga0070689_1000051913 | 3300005340 | Switchgrass Rhizosphere | MSRVGVGIVIDKLLTDEALRVEFALDRMETVAELCLRGAELTRDEVELLCLTDARLWLVGEEVRGEWQQ* |
| Ga0070671_1014577391 | 3300005355 | Switchgrass Rhizosphere | MSRAGVGTVIEKLLTDKCLRIRFALDRIETIAELYLGGFELTRDEIDLFCRTDARLWFLGDN |
| Ga0070674_1008815341 | 3300005356 | Miscanthus Rhizosphere | MSRAAVGLVVENLLTDENLRFRFAIDPMATVAELFLCGLDLTCDEVDLLCRTDPGLWFLRSALRGQPQH* |
| Ga0070659_1021187721 | 3300005366 | Corn Rhizosphere | GVGTVIEKLLTDQNLRIRFALNQIETVAELCLRGVELTREEVDLFCWTNARLWFLGDEVRGE* |
| Ga0070678_1020330651 | 3300005456 | Miscanthus Rhizosphere | MSQAGVGTVIEKLLTDENLRIRFALDQMETVAELCLRGVELTRDEVDLFCWTNARLWFLGDEVRGE* |
| Ga0070662_1018167272 | 3300005457 | Corn Rhizosphere | VGTVIDKLLTDKNLRIRFALDQLETVAELCLRGVELTRDEVDLFCWTNARLWFLGDEVRGE* |
| Ga0068858_1001886033 | 3300005842 | Switchgrass Rhizosphere | MSRVGVGIVIDKLLTDEALRVEFALDRMETVAELWLRGAELTRDEVELLCLTDARLWLVGEEV |
| Ga0068858_1019231251 | 3300005842 | Switchgrass Rhizosphere | MSQAGVGTVIDKLLTDKNLRIRFALDQLETVAELCLRGVELTRDEVDLFCWTNAR |
| Ga0068860_1010335623 | 3300005843 | Switchgrass Rhizosphere | MADAGQNEEGVVSRAGVGIVVEKLLSDETLRARFALDPMETVADLFLRGVDLTRCEIDLLRRTDPGVWFLRSAQSGQPQH* |
| Ga0081539_101617691 | 3300005985 | Tabebuia Heterophylla Rhizosphere | MSQAGVGMAIERLLTDENLRGRFAADRIETVAEMCLCGVDLTRDEIELFFRTDPRVWCVADEVKSERRL* |
| Ga0075417_100327771 | 3300006049 | Populus Rhizosphere | MSQAAVGTVVENLLTNEDLRLRFALDPMDTIADLFLCGLDLTRDEIDLLCRTNPGLWFLRSALRGQPQH* |
| Ga0075417_107319051 | 3300006049 | Populus Rhizosphere | YSSEGGEAMSQAGVGTVIDKLLTDKNLRIRFALDQLETVAELCLRGVELTRDEVDLFCWTNARLWFLGDEVRGE* |
| Ga0068871_1021580841 | 3300006358 | Miscanthus Rhizosphere | GVGTVIEKLLTDENLRIRFALDQMETVAELCLRGVELTREEVDLFCWTNARLWFLGDEVRGE* |
| Ga0075428_10001174611 | 3300006844 | Populus Rhizosphere | MSRVNVGLVIDKLLTDENLRIRFALDRLETVAELYLRGFDLTRDEIDLLCRTDAGVWFLRSAVSGAPLH* |
| Ga0075428_1007327411 | 3300006844 | Populus Rhizosphere | MSRAGVGMVIETLLTDERLRVRFSLDRIEAIAELCLRGVELTRDEIDLVCRTDVRLWFPGDHVRGEWLQ* |
| Ga0075428_1007616422 | 3300006844 | Populus Rhizosphere | MSQMGVEEVVDLLLTNENLRIRFALDRIETVAELCLLGFDLSPEDVELFCWTDPRLWFGDIARGERLH* |
| Ga0075421_1002916313 | 3300006845 | Populus Rhizosphere | MSQAGVGMVIEKLLTDERLRIRFARDRMETIAELCLRGFELTRDEIDLIYRTDARLWFVSDHVRGEWLQ* |
| Ga0075421_1002961524 | 3300006845 | Populus Rhizosphere | MSRASVGMVIDKLLTDEHLRIRFALDRLETVAALCLGGFDLTRDEIDLLCGTDAGVWFLRSAVRGAPQH* |
| Ga0075421_1004652892 | 3300006845 | Populus Rhizosphere | MSRAAVGMVVESLLTDENLRIRFAVDPMVTVAELFLCGLDLTGDEIDLLSRADPGLWFLRSALEGQPLH* |
| Ga0075421_1005179292 | 3300006845 | Populus Rhizosphere | MSQAGVGTVIEKLLTDQNLRIRFALNQIETVGELCLRGVELTREEVDLFCWTNARLWFLGDEVRGE* |
| Ga0075421_1006990161 | 3300006845 | Populus Rhizosphere | GMVIDKLLTDENLRIRFALDRLETVAELCLRGFDLTRDEIDLLCRTDAGVWFLRSAVSGAPQH* |
| Ga0075421_1007252251 | 3300006845 | Populus Rhizosphere | MSRAGVGMVVEELLTDENLRVRFALDPMEMVADLFLRGVNLTRAEIDLFRRTDPGVWFLRSALSGQPQH* |
| Ga0075430_1004437292 | 3300006846 | Populus Rhizosphere | MSQAGVGMVIEKLLTDEGLRIRFALDRIETIAELCLRGFELTRDELDLLYRTDVRLWFRDVRGQWLQ* |
| Ga0075431_1001610072 | 3300006847 | Populus Rhizosphere | MSRTSVGMVIDKLLTDENLRIRFALDRLETVAELCLRGFDLTRDEIDLLCRTDAGVWFLRSAVSGAPQH* |
| Ga0075431_1007800092 | 3300006847 | Populus Rhizosphere | MAIEKLLTDERLRIRFARDRMETIAELCLRGFELTRDEIDLIYRTDARLWFVSDHVRGEWLQ* |
| Ga0075431_1008120662 | 3300006847 | Populus Rhizosphere | MSRASVGMVIDKLLTDEHLRIRFALDRLETVAALCLGGFDLTRDEIDLLCGTDAGVWFLRSAVRGAPQQ* |
| Ga0075431_1008187672 | 3300006847 | Populus Rhizosphere | MSRAAVGMVVENLLTDENLRIRFAVDPMATVAELFLCGLDLTGDEIDLLSRADPGLWFLRSALEGQPLH* |
| Ga0075433_112174982 | 3300006852 | Populus Rhizosphere | MSRAGVGMVVEELLTDENLRVRFALDPMETVADLFLLGVDLTRNEIDLFRRTDPGLWFLTSALSGQPQH* |
| Ga0075420_1016195541 | 3300006853 | Populus Rhizosphere | MSRAAVGMAVENLLTDENLRIRFAVDPMATVAELFLCGLDLTRDEVDLLCRTDPSLWFLRSALKGQPQH* |
| Ga0075420_1017606561 | 3300006853 | Populus Rhizosphere | MSRANVGRVVEELLADENLRIRFALDRIGAVVDLFRRGFDLSSDEIDLFYRTDACLWFMGDIAIGERPQ* |
| Ga0068865_1005590101 | 3300006881 | Miscanthus Rhizosphere | MSQAGVGTVIEKLLTDQNLRIRFALNQIETVAELCLRGVELTREEVDLFCWTNARLWFLGDEVEGE* |
| Ga0075419_103719832 | 3300006969 | Populus Rhizosphere | MSQAGVGMVIEKLLTDQNLRIRFALNQIETVGELCLRGVELTREEVDLFCWTNARLWFLGDEVRGE* |
| Ga0075419_104802202 | 3300006969 | Populus Rhizosphere | MSRAIVGMVIDKLLTDENLRIRFALDRLETIADLCLRGFDLTRDEIDLLCRTDAGVWFLRSAVTGAPQH* |
| Ga0111539_102504361 | 3300009094 | Populus Rhizosphere | MVIETLLTDERLRVRFALDRIEAIAELCLRGVELTRDEIDLVCRTDVRLWFPGDHVRGEWLQ* |
| Ga0111539_102509963 | 3300009094 | Populus Rhizosphere | MVVENLLTDENLRIRFAVDPMPTVAELFLCGLDLTGDEIDLLSRADPGLWFLRSALEGQPLH* |
| Ga0111539_103690523 | 3300009094 | Populus Rhizosphere | MSRAAVGLVVESLLTDENLRTRFAIDPMATVAELFLCGLDLTCDEVDLLCRTDPGLWFLRSALKDQPQH* |
| Ga0111539_107248853 | 3300009094 | Populus Rhizosphere | MLPWDAGQKEAGVMSQAAVGTVVENLLTNEDLRLRFALDPMDTIADLFLCGLDLTRDEIDLLCRTDPGLWFLRSALRGQPQH* |
| Ga0111539_125051722 | 3300009094 | Populus Rhizosphere | MVIDKLLTDENLRIRFAIDRMETVADLCLRGFDLTRDEIDLLCRTDAGVWFLRSAVSGAPQH* |
| Ga0075418_101214883 | 3300009100 | Populus Rhizosphere | MAWMLPLPGEGGEAMSQAGVGTVIEKLLTDENLRIRFALDRIETVAELCLRGVELTHTEVELFCWTNADLWFLGDEVSGEWQH* |
| Ga0075418_107628463 | 3300009100 | Populus Rhizosphere | AVGMAVENLLTDENLRIRFAVDPMATVAELFLCGLDLTRDEVDLLCRTDPSLWFLRSALKGQPQH* |
| Ga0114129_111198111 | 3300009147 | Populus Rhizosphere | MAVENLLTDENLRIRFAVDPMATVAELFLCGLDLTGDEIDLLSRADPGLWFLRSALEGQPLH* |
| Ga0114129_126440522 | 3300009147 | Populus Rhizosphere | MSQMGVEKVVDLLLTNENLRIRFALDRIETVAELCLLGFDLSPEDVELFCWTDPRLWFGDIARGERLH* |
| Ga0075423_121677131 | 3300009162 | Populus Rhizosphere | MVVEELLTDENLRVRFALEPMETVADLFLRGVDLTRNEIDLFRRTDPTVWFLSSALSGQPQH* |
| Ga0105248_123167042 | 3300009177 | Switchgrass Rhizosphere | MVIEKLVTVESVRIRFALDPMETIAELCLRGFELTRDEVDLLCRTDARLWFLGDEVIGEWQH* |
| Ga0105249_127571742 | 3300009553 | Switchgrass Rhizosphere | AGIMSRAAVGVVVENLLTDENLRTRFAVDPMATVAQLFLCGLDLTRDEIDLLCRTDAGLWFLRSALRGQPQH* |
| Ga0105347_14193411 | 3300009609 | Soil | MVIDKLLTDENLRIRFALDRVETVAELCLRGFDLSRDEIDLLCRTDAGVWFLRSAVSGAPQH* |
| Ga0105347_14327511 | 3300009609 | Soil | MVVEKLLTDESLRIQFALDRMETIAELCLRGIELTRDEIDLINRTDARLWFLGDPKCEW |
| Ga0105252_106046731 | 3300009678 | Soil | TVIEKLVTDRNLRIRFALDPIETVAELYLRGVELTRDEIDLFCRTDARLWFLDDAVRGEWQS* |
| Ga0105239_116735281 | 3300010375 | Corn Rhizosphere | LLTDENLRFRFAVDPMATVAELFLCGLDLTRDEVDLLCRTDPGLWFLRSALRGQPQH* |
| Ga0137313_10967771 | 3300011403 | Soil | MSQAGVGTVIEKLLTDESLRTRFALDRIETIAELCLRGADLTGDEVETLCWTNARLWFLGDEVRAECQH* |
| Ga0137424_11076851 | 3300011412 | Soil | MVIGELLTDENLRIRFALDPVETIADLCLRGFDLTRDEIDLLCRTDAGVWFLRSAVSGAPQH* |
| Ga0137425_10910901 | 3300011422 | Soil | MVIDKLLTDENLRIRFALDRVETVVELCLRGFDLTHDEINLLCRTDAGVWFLRSAVSGAPQH* |
| Ga0137455_12219091 | 3300011429 | Soil | MVIDKLLTDENLRLRFAVDPMETVAGLFLRGFDLTRNEIDLLCRTDAGVWFLRSAVRGAPQH* |
| Ga0137423_10668302 | 3300011430 | Soil | MSQAGVGTVIEKLLTDENLRIRFALDQIETVAELCLRGVELTRDEVDLFCWTNARLWFLGDEVRDEWQH* |
| Ga0137428_10109262 | 3300011432 | Soil | MSQAGVGTVIEKLLTDETMRIRFALDPIETVAELCLRGVELTSDEIDLFYRTNARLWFQPDEVRSEWEH* |
| Ga0137458_11011471 | 3300011436 | Soil | MSQAGVGTVIEKLLTDENLRIRFALDRIETIAELCLRGVELTGDEVETLCWTNAGLWCLGDEVGDKWQH* |
| Ga0120187_10290541 | 3300012015 | Terrestrial | MVIDKLLTDENLRIRFALDRLETVADLCLRGFDLTRDEIDLLCRTDAGVWFLRSAVRGAPQH* |
| Ga0137322_10053403 | 3300012146 | Soil | MVVENLLTDERLRIRFALDRMETIAELCLRGFELTRDEIDLFERTDARLWFLGDHVGGECRQ* |
| Ga0137353_10263761 | 3300012157 | Soil | MSQAGVGTVIEKLLTDENLRIRFALDRIETVAELCLRGVELTGDEVETLCWTNARLWFLGDEVRDEWQH* |
| Ga0162653_1000093501 | 3300012937 | Soil | MSRTSVGLVIDKLLTDENLRIRFALDRLETVAELCLRGFDLTRDEIDLLCRTDAGVWFLRSAVSGAPQH* |
| Ga0164303_112472661 | 3300012957 | Soil | MVIEKLLTDENLRIRFAFDRDETIAELCLRGFDLNPGEIDLLYRTDAGLWFLKSALRGATQQ* |
| Ga0157374_115937492 | 3300013296 | Miscanthus Rhizosphere | MVLETMVTVESVRMQFALDPMETIADLCLRGFELTHDEVDLLCRTDARLWFLGDEVIGEWQH* |
| Ga0163162_100503853 | 3300013306 | Switchgrass Rhizosphere | VIDKLLTDEALRVEFALDRMETVAELWLRGAELTRDEVELLCLTDARLWLVGEEVRGEWQQ* |
| Ga0075311_11227961 | 3300014259 | Natural And Restored Wetlands | TPRGGSVMSQHTVGVVIDKLLTDDDLRIRFVIDRMKTLAELCLRGFELSPNEIDLFCRTDARLWF* |
| Ga0157380_130399692 | 3300014326 | Switchgrass Rhizosphere | QAGVGTVIEKLLTDENLRIRFALDQMETVAELCLRGVELTREEVDLFCWTNARLWFLGDEVRGE* |
| Ga0180088_10330101 | 3300014868 | Soil | MSQAGVGTAIEKLLTDESLRIRFALDRIETVAELCLRGVELTRDEVDLFCRTDARLWFLGDTVRTEWQH* |
| Ga0157376_110243561 | 3300014969 | Miscanthus Rhizosphere | IVIDKLLTDEALRVEFALDRMETVAELWLRGAELTRDEVELLCLTDARLWLVGEEVRGEWQQ* |
| Ga0180093_11471232 | 3300015258 | Soil | MSQIGKVIDKLLTDENLRIRFALDRVETVAELCLRGFDLTRDEIDLLCRTDAGVWFLRSAVRGAPQH* |
| Ga0132258_100226922 | 3300015371 | Arabidopsis Rhizosphere | MVIEKLITVESVRLRFALDPMETIAELCLRGFDLTRDEIELLCRTDARLWFLGDEVIGEWQH* |
| Ga0132258_101104852 | 3300015371 | Arabidopsis Rhizosphere | MLPETRGRFKEDAMSRIGVGMVIEKLLTEQDLRVRFALDPIETVAELFLRGFDLTRDEADLFCRTDAGLWFLRSAVSGAPQH* |
| Ga0132258_122242483 | 3300015371 | Arabidopsis Rhizosphere | MSRAAVGLVVENLLTDENLRFRFAIDPMATVAELFLCGLDLTCDEVDLLCRTDPGLWFLRSALKGQPQH* |
| Ga0132258_126850182 | 3300015371 | Arabidopsis Rhizosphere | ELLTDEDLRVRFALDPMETVADLFLRGVDLTRNEIDLFGRTDPGVWFLRRALSGQPQH* |
| Ga0132255_1006325541 | 3300015374 | Arabidopsis Rhizosphere | KEAGVMSRAGVGMVVEELLTDENLRVRFALDPMETVADLFLRGVDLTRNEIDLFRRTDPSLWFLTSALSGQPQH* |
| Ga0163161_101483602 | 3300017792 | Switchgrass Rhizosphere | MSQAGVGTVIDKLLTDKNLRIRFALDQLETVAELCLRGVELTRDEVDLFCWTNARLWFLGDEVRCE |
| Ga0163161_113538601 | 3300017792 | Switchgrass Rhizosphere | MSRAGVGMVVEELLTDENLRVRFALDPAETVADLFLRGVDLTRNEIDLFRRTDPSLWFLTSVLSGQPQT |
| Ga0163161_115882091 | 3300017792 | Switchgrass Rhizosphere | MSQAGVGTVIEKLLTDQNLRIRFALNQIETVAELCLRGVELTREEVDLFCWTNARLWFLGDE |
| Ga0184626_100127694 | 3300018053 | Groundwater Sediment | MSRASVGMVIDKLLTDENLRIRFALDRLETVAELCLRGLDLTRDEIDLLCRTDAGVWFLRSAVTGAPQH |
| Ga0184611_11138471 | 3300018067 | Groundwater Sediment | MSRAAVGLVVENLLTDENLRTRFAVDPMATVAELFLRGLDLTRDEIDLLCRTDAGLWFLRSALTGQPQH |
| Ga0184628_100005118 | 3300018083 | Groundwater Sediment | MSQVGVGTVIEKLLTEETLRIRFALNRLETVAELCLQGIELSRDEVDLFCRTNARLWFLLDEASSGWLH |
| Ga0184629_104381482 | 3300018084 | Groundwater Sediment | MSRSIVGMVIDKLLTDENLRIRFALDRVETVAELCLRGFDLTRDEIDLLCRTDAGVWFLRSAVRGAPQH |
| Ga0190270_105272802 | 3300018469 | Soil | MSRSIVGMVIEKLLTDENLRLRFALDRVETVAELCLRGFDLTRDEIDLLYRTDAGVWFLRSALRGAPQH |
| Ga0190270_121225252 | 3300018469 | Soil | MSRSIVGMVIDKLLTDENLRLRFALDRVETVVELCLRGFDLTGDEIDLLCRTDAGVWFLRSAVSGAPQH |
| Ga0190274_107226781 | 3300018476 | Soil | MSRPGVGMVIETLVTVESVRIRFALDPLETIAELCLRGFELTRDEVDLLCRTDARLWLLGDEIIGEWQH |
| Ga0190274_133225821 | 3300018476 | Soil | MSRAGVGMVIEKLLTDEGLRMRFALDRMETIAELYLRGFELTGDEIDLFDRSDARLWFLGDRVRNEWQR |
| Ga0190271_102301272 | 3300018481 | Soil | MSRSIVGMVIEKLLTDENLRIRFALDRVETVAELCLRGFDLTRDEIDLLCRTDAGVWFLRSAVRGAPQH |
| Ga0190271_117869882 | 3300018481 | Soil | MSRRSVGLVVEKLLTDENLRLRFAIDRTETIAELCLRGVELTRDEIDLFCGTDARLWFLIDQRGLSQQ |
| Ga0190271_130615311 | 3300018481 | Soil | MSRANVGMVIDKLLTDENLRLRFALDRVETVVELCLRGFDLTGDEIDLLCRTDAGVWFLRSAVSGAPQH |
| Ga0173481_106308921 | 3300019356 | Soil | MSRAGVGMVIEKLVTDENLRIRFAVDRIDTVAEIFLRGFDLSQDELDLFCRTDAGLWFLSELAIGEPQH |
| Ga0190264_117767381 | 3300019377 | Soil | MSRVNVGLVIDQLLTDEHLGIRFALDRLETVAELCLRGFDLTRDEIDLLCRTDAGVWFLRSAVSGAPQH |
| Ga0210379_100074151 | 3300021081 | Groundwater Sediment | MSRANVGMVIDKLLTDENLRLRFAVDPMETVAGLFLRGFDLTRNEIDLLCRTDAGVWFLRSAVRGAPQH |
| Ga0207697_100070733 | 3300025315 | Corn, Switchgrass And Miscanthus Rhizosphere | MSRVGVGIVIDKLLTDEALRVEFALDRMETVAELCLRGAELTRDEVELLCLTDARLWLVGEEVRGEWQQ |
| Ga0207697_101307582 | 3300025315 | Corn, Switchgrass And Miscanthus Rhizosphere | MSQAGVGTVIEKLLTDENLRIRFALDQMETVAELCLRGVELTREEVDLFCWTNARLWFLGDEVRGE |
| Ga0207680_100229642 | 3300025903 | Switchgrass Rhizosphere | MSRVGVGIVIDKLLTDEALRVEFALDRMETVAELWLRGAELTRDEVELLCLTDARLWLVGEEVRGEWQQ |
| Ga0207680_100542433 | 3300025903 | Switchgrass Rhizosphere | MSQAGVGTVIEKLLTDQNLRIRFALNQIETVAELCLRGVELTREEVDLFCWTNARLWFLGDEVGGE |
| Ga0207645_100567801 | 3300025907 | Miscanthus Rhizosphere | MSQAGVGTVIEKLLTDQNLRIRFALNQIETVAELCLRGVELTREEVDLFCWTNARLWFLGDAVGGE |
| Ga0207645_102019172 | 3300025907 | Miscanthus Rhizosphere | GVGTVIDKLLTDKNLRIRFALDQLETVAELCLRGVELTRDEVDLFCWTNARLWFLGDEVRGE |
| Ga0207643_100040403 | 3300025908 | Miscanthus Rhizosphere | MSQAGVGTVIDKLLTDKNLRIRFALDQLETVAELCLRGVELTRDEVDLFCWTNARLWFLGDEVRGE |
| Ga0207681_106168841 | 3300025923 | Switchgrass Rhizosphere | MSRVGVGIVIDKLLTDEALRVEFALDRMETVAELWLRGAELTRDEVELLCLTDARLWLVGEEVRG |
| Ga0207681_106324231 | 3300025923 | Switchgrass Rhizosphere | MSQAGVGTVIEKLLTDQNLRIRFALNQIETVAELCLRGVELTREEVDLFCWTNARLWFLGDEVRGE |
| Ga0207701_108633862 | 3300025930 | Corn, Switchgrass And Miscanthus Rhizosphere | MSRIGVGMVIEKLLTEQDLRVRFALDPIETVAELFLRGFDLTRDEADLFCRTDAGLWFLRSAVSGAPQH |
| Ga0207644_101722381 | 3300025931 | Switchgrass Rhizosphere | MSRVGVGIVIDKLLTDEALRVEFALDRMETVAELWLRGAELTRDEVELLCLTDARLWLVGEEVRGEWQH |
| Ga0207644_117564101 | 3300025931 | Switchgrass Rhizosphere | MSRAGVGTVIEKLLTDKCLRIRFALDRIETIAELYLGGFELTRDEIDLFCRTDARLWFLGDNVRGEGQH |
| Ga0207711_111123822 | 3300025941 | Switchgrass Rhizosphere | MSRPGVGMVIEKLVTVESVRIRFALDPMETIAELCLRGFELTRDEVDLLCRTDARLWFLGDEVIGE |
| Ga0207668_103704602 | 3300025972 | Switchgrass Rhizosphere | MSQAGVGTVIEKLLTDENLRIRFALDQMETVAELCLRGVELTREEVDLFCWTNARLWFLGDEVGGE |
| Ga0207658_115405452 | 3300025986 | Switchgrass Rhizosphere | MSQAGVGTVIEKLLTDKNLRIRFALDQLETVAELCLRGVELTRDEVDLFCWTNARLWFLGDEVRGE |
| Ga0207703_105470472 | 3300026035 | Switchgrass Rhizosphere | MSQAGVGTVIDKLRTDKNLRIRFALDQLETVAELCLRGVELTRDEVDLFCWTNARLWFLGDEVRGE |
| Ga0207675_1011664842 | 3300026118 | Switchgrass Rhizosphere | MSRAAVGLVVENLLTDENLRTQFAVDPVATVAELFLGGLDLTRDEIDLLCRTDAALWFLRSALRGQPQ |
| Ga0207698_106386243 | 3300026142 | Corn Rhizosphere | SRVGVGIVIDKLLTDEALRVEFALDRMETVAELCLRGAELTRDEVELLCLTDARLWLVGEEVRGEWQQ |
| Ga0209481_103628261 | 3300027880 | Populus Rhizosphere | MSRVNVGLVIDKLLTDENLRIRFALDRLETVAELYLRGFDLTRDEIDLLCRTDAGVWFLRSAVSGAPLH |
| Ga0207428_107594171 | 3300027907 | Populus Rhizosphere | MSRAAVGLVVESLLTDENLRTRFAIDPMATVAELFLCGLDLTCDEVDLLCRTDPGLWFLRSALRGQPQH |
| Ga0209382_1000749012 | 3300027909 | Populus Rhizosphere | MSRASVGMVIDKLLTDEHLRIRFALDRLETVAALCLGGFDLTRDEIDLLCGTDAGVWFLRSAVRGAPQH |
| Ga0209382_100509354 | 3300027909 | Populus Rhizosphere | MSQAGVGMVIEKLLTDERLRIRFARDRMETIAELCLRGFELTRDEIDLIYRTDARLWFVSDHVRGEWLQ |
| Ga0209382_101250083 | 3300027909 | Populus Rhizosphere | MSRASVGMVIDKLLTDENLRIRFALDRLETVAELCLRGFDLTRDEIDLLCRTDAGVWFLRSAVSGAPQH |
| Ga0209382_101581323 | 3300027909 | Populus Rhizosphere | MSQAGVGTVIEKLLTDQNLRIRFALNQIETVGELCLRGVELTREEVDLFCWTNARLWFLGDEVRGE |
| Ga0209382_111034811 | 3300027909 | Populus Rhizosphere | MSRAGVGMVVEELLTDENLRVRFALDPMEMVADLFLRGVNLTRAEIDLFRRTDPGVWFLRSALSGQPQH |
| Ga0209382_113292242 | 3300027909 | Populus Rhizosphere | VDVALGAGQKEAGVMSRAAVGMAVENLLTDENLRIRFAVDPMATVAELFLCGLDLTRDEVDLLCRTDPSLWFLRSALKGQPQH |
| Ga0247828_104706191 | 3300028587 | Soil | MSRTGIGMVIDKLLTDENLRMRFALDRIETVAELCLRGFDLSPDEIDLFCRTDAGLWFLRSAVSGAPQQ |
| Ga0268386_105392562 | 3300030619 | Soil | MSQTVVGKVVEQLLTDENLRLRFALDRIETVAELCLRGFDLSREDIDLFCRTDARVWCLDDIAGGERPH |
| Ga0299914_1000090010 | 3300031228 | Soil | MSRASVGMVIDKLLTDENLRIRFALDPIETVAELFLRGFDLTRDEIDLLCRTDAGVWFLRSTVRGAPQH |
| Ga0310888_107117291 | 3300031538 | Soil | MSRTIVGMVIDKLLTDENLRIRFAIDRMETVADLCLRGFDLTRDEIDLLCRTDAGVWFLRSAVSGAPQH |
| Ga0310887_107434922 | 3300031547 | Soil | MSRAAVGMAVENLLTDENLRTRFAVDPMATVAELFLRGIDLTRDEIDLLCRTDAALWFLRSALSGQPQH |
| Ga0310887_107539451 | 3300031547 | Soil | MSRAAVGMVVENLLTDENLRIRFAVDPMATVAELFLCGLDLTGDEIDLLSRADPGLWFLRSALEGQPLH |
| Ga0310904_109276881 | 3300031854 | Soil | MSRAAVGMAVENLLTDENLRTRFAVDPMATVAELFLRGLDLTRDEIDLLCRTDAALWFLRSALSGQPQH |
| Ga0310892_100346262 | 3300031858 | Soil | MSQAGVGTVIDKLLTDKNLRIRFAIDQLETVAELCLRGVELTRDEVDLFCWTNARLWFLGDEVRGE |
| Ga0310892_102656803 | 3300031858 | Soil | MSRAAVGMVVENLLTDENLRIRFAVDPMATVAELFLRGLDLTRDEIDLLCRTDAALWFLRSALSGQPQH |
| Ga0310893_100183531 | 3300031892 | Soil | MSQAGVGTVIDKLLTDKNLRIRFALDQIETVAELCLRGVELTRDEVDLFCWTNARLWFLGDEVRGE |
| Ga0307406_108555192 | 3300031901 | Rhizosphere | MSRAGVGMVIEKLLTDERLRIEFALDRMETIAELCLRGFDLTRDEVDLISRADARLWFLGDQVSGEWLQ |
| Ga0310900_103637732 | 3300031908 | Soil | ASVGMVIDNLLTDENLRIRFAVDPIETVAALFLRGFDLTRDEIDLLCRTDAGVWFLRSAVTGAPLH |
| Ga0310884_104597691 | 3300031944 | Soil | RYSSEGGEAMSQAGVGTVIDKLLTDKNLRIRFALDQLETVAELCLRGVELTRDEVDLFCWTNARLWFLGDEVRGE |
| Ga0310902_103441662 | 3300032012 | Soil | MSRAAVGMVVENLLTDENLRTRFAVDPMATVAELFLRGIDLTRDEIDLLCRTDAALWFLRSALSGQPQH |
| Ga0310906_108758981 | 3300032013 | Soil | MSRASVGRIVENLLTDENLRIRFAIDRMETIAELCLRGFELTRDEIELFRQTDARLWFGMDQRGRCQQ |
| Ga0310890_104519072 | 3300032075 | Soil | VLLARRGVDVAVAQCRSEGGDVMSRASVGMVIDNLRIRFAVDPIETVAALFLRGFDLTRDEIDLLCRTDAGVWFLRSAVTGAPLH |
| Ga0310896_101092661 | 3300032211 | Soil | MSRAAVGMAVENLLTDENLRIRFAVDPMATVAELFLRGLDLTRDEIDLLCRTDAALWFLRSALSGQPQH |
| Ga0247830_100499013 | 3300033551 | Soil | MSRAGVGMVIEKLLTDEGLRIRFALDRIETIAELCLSGFELTRDELDLIYRTDVHLWFRDHVRGQWLQ |
| Ga0364945_0000239_13519_13707 | 3300034115 | Sediment | MVIDKLLTDENLRLRFAVDPMETVAGLFLRGFDLTRNEIDLLCRTDAGVWFLRSAVRGAPQH |
| Ga0364929_0020498_2_184 | 3300034149 | Sediment | IDKLLTDENLRIRFALDRVETVAELCLRGFDLTRDEIDLLCRTDAGVWFLRSAVRGAPQH |
| Ga0364929_0062384_451_639 | 3300034149 | Sediment | MVFDKLLTDENLRLRFAVDPMETVAGLFLRGFDLTRNEIDLLCRTDAGVWFLRSAVRGAPQH |
| Ga0364933_041923_31_219 | 3300034150 | Sediment | MVVEELLTDENLRARFALEPMETVADLFLRGVDLTHNEIDLFRRTDPGVWFLRSALSSQPQH |
| Ga0364943_0107156_26_214 | 3300034354 | Sediment | MVVEELLTDENLRVRFALDPMETVADLFLRGVDLTRNEIDLFRRTDPGVWFLRSALSGQPQH |
| Ga0364941_216722_327_500 | 3300034417 | Sediment | LLTDENLRARFALEPMETVADLFLRGVDLTRNEIDLFRRTDPGVWFLRSALSGQPQH |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |