NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F032389

Metagenome / Metatranscriptome Family F032389

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F032389
Family Type Metagenome / Metatranscriptome
Number of Sequences 180
Average Sequence Length 50 residues
Representative Sequence MIIFVPVSIFEHKPQFCPFGHRLWPGGAQVSWKPCICAAAREGAERGRGM
Number of Associated Samples 153
Number of Associated Scaffolds 180

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 41.27 %
% of genes near scaffold ends (potentially truncated) 68.33 %
% of genes from short scaffolds (< 2000 bps) 63.33 %
Associated GOLD sequencing projects 146
AlphaFold2 3D model prediction Yes
3D model pTM-score0.27

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (58.889 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(28.889 % of family members)
Environment Ontology (ENVO) Unclassified
(21.111 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(45.556 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.
1JGI1027J12803_1069317271
2C688J14111_102605901
3Ga0062386_1016694691
4Ga0068966_14736771
5Ga0062388_1029774331
6Ga0066388_1078411981
7Ga0070691_103566431
8Ga0070714_1002820901
9Ga0070714_1018553251
10Ga0070713_1009558102
11Ga0070710_109198052
12Ga0070706_1001881821
13Ga0070707_1023301462
14Ga0066699_110711291
15Ga0068854_1009077921
16Ga0068856_1016997412
17Ga0070766_111668381
18Ga0075017_1007621901
19Ga0075015_1004417291
20Ga0075014_1009807971
21Ga0070712_1008233432
22Ga0070712_1011040851
23Ga0066665_114534552
24Ga0075424_1024706702
25Ga0079219_108026771
26Ga0079219_112629991
27Ga0099829_101027133
28Ga0066709_1023377082
29Ga0105241_119674301
30Ga0116214_13236121
31Ga0116214_13427661
32Ga0116221_14642092
33Ga0116224_101034104
34Ga0116217_104038503
35Ga0116134_10473871
36Ga0134064_103998761
37Ga0074044_110383102
38Ga0126378_129872061
39Ga0134125_115996501
40Ga0134128_100721841
41Ga0134126_104425211
42Ga0134126_114720411
43Ga0138573_10636842
44Ga0137383_100165026
45Ga0137363_104124033
46Ga0137384_104649891
47Ga0137360_113018501
48Ga0164301_113983532
49Ga0164306_101226961
50Ga0137409_102173031
51Ga0134085_102502281
52Ga0132255_1013915251
53Ga0182041_108412821
54Ga0182035_112792321
55Ga0182040_101204154
56Ga0182038_103863753
57Ga0187820_12293712
58Ga0187820_12958381
59Ga0187807_13044422
60Ga0187806_12413231
61Ga0187808_100459054
62Ga0187808_102426801
63Ga0187879_102485791
64Ga0187817_108942471
65Ga0187779_101341011
66Ga0187781_108040791
67Ga0187780_106981722
68Ga0187780_111384632
69Ga0187782_107124661
70Ga0187823_100254054
71Ga0187816_105063321
72Ga0187767_103365151
73Ga0187804_105954321
74Ga0187805_101207093
75Ga0187810_104101172
76Ga0187765_103224422
77Ga0187772_106492832
78Ga0187769_106202941
79Ga0187768_11372322
80Ga0210407_105517941
81Ga0210395_113281712
82Ga0210404_108121551
83Ga0210405_100963581
84Ga0210405_103832241
85Ga0210405_114172792
86Ga0210408_100824424
87Ga0210396_115052862
88Ga0210385_103591654
89Ga0210397_115239002
90Ga0210387_100967844
91Ga0210384_101328011
92Ga0210384_106965691
93Ga0210384_107332051
94Ga0213879_102095332
95Ga0210390_102098463
96Ga0210398_102809501
97Ga0210402_117999142
98Ga0210410_101734364
99Ga0210409_109316303
100Ga0207655_11246571
101Ga0207692_102157612
102Ga0207692_107822481
103Ga0207692_110176952
104Ga0207699_107294452
105Ga0207684_104702761
106Ga0207663_101455233
107Ga0207687_116026282
108Ga0207700_112028852
109Ga0207664_118866721
110Ga0207661_100589031
111Ga0209027_11606581
112Ga0257171_10247092
113Ga0207746_10225611
114Ga0207822_10307961
115Ga0209523_10922921
116Ga0209420_10621041
117Ga0209626_10971022
118Ga0209177_104772062
119Ga0209275_102912951
120Ga0209488_102939563
121Ga0307282_106515321
122Ga0302232_103165612
123Ga0302226_100276925
124Ga0307308_100472081
125Ga0308309_107118942
126Ga0308309_114781391
127Ga0310037_100469002
128Ga0311370_111344241
129Ga0311370_121241041
130Ga0311356_118626052
131Ga0302317_101303211
132Ga0302325_106474173
133Ga0318534_102189161
134Ga0318534_102902761
135Ga0318538_103569252
136Ga0318573_103882832
137Ga0318555_103836211
138Ga0318555_105569911
139Ga0318561_104233763
140Ga0318560_105936632
141Ga0310686_1056808503
142Ga0310686_1154933811
143Ga0318493_100219004
144Ga0318493_101727441
145Ga0318493_107904641
146Ga0318492_108223232
147Ga0318494_107294141
148Ga0318566_104707461
149Ga0318550_102122771
150Ga0318550_104638961
151Ga0318497_104157881
152Ga0318564_101321172
153Ga0318499_103595572
154Ga0318512_105773111
155Ga0318495_104293221
156Ga0318536_100240954
157Ga0318551_103887902
158Ga0318551_105681372
159Ga0318520_109147131
160Ga0306921_118830452
161Ga0310916_114506021
162Ga0310910_109775802
163Ga0318545_102946282
164Ga0318558_106254321
165Ga0318577_100344991
166Ga0318577_102303082
167Ga0318540_103043311
168Ga0307472_1016153612
169Ga0306920_1021111691
170Ga0335085_112604931
171Ga0335082_100557851
172Ga0335078_115286291
173Ga0335080_114873931
174Ga0335081_100070501
175Ga0335083_101084181
176Ga0335083_115175972
177Ga0335076_108628702
178Ga0335076_111263012
179Ga0335076_117233951
180Ga0370483_0072739_914_1108
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 12.82%    β-sheet: 2.56%    Coil/Unstructured: 84.62%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

5101520253035404550MIIFVPVSIFEHKPQFCPFGHRLWPGGAQVSWKPCICAAAREGAERGRGMSequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.27
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
58.9%41.1%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Peatland
Bog Forest Soil
Peatland
Freshwater Sediment
Watersheds
Soil
Vadose Zone Soil
Terrestrial Soil
Tropical Forest Soil
Bulk Soil
Grasslands Soil
Peatlands Soil
Agricultural Soil
Soil
Grasslands Soil
Soil
Soil
Hardwood Forest Soil
Soil
Untreated Peat Soil
Tropical Peatland
Bog Forest Soil
Soil
Tropical Forest Soil
Forest Soil
Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Corn Rhizosphere
Agricultural Soil
Palsa
Arabidopsis Rhizosphere
Corn Rhizosphere
Populus Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
6.7%3.3%3.9%4.4%28.9%3.3%5.6%5.6%7.8%3.9%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI1027J12803_10693172713300000955SoilMIVFVSVSMFDHKPERCPFGHSAWPGMAQVGWQPCICTAAQEAAQRGRGMGHL*
C688J14111_1026059013300001305SoilMIIFVPVSIFENKPEFCPFGHQLWPGGAQVSWKPCICAPAREGAERGRGLGHVWVSCRAC
Ga0062386_10166946913300004152Bog Forest SoilMIIFVSVSMFDHKLERCPLGHSLWPGMAQVGWQPCIWTAAREAAGRGRGMGHLWVSCNTCHD*
Ga0068966_147367713300004476Peatlands SoilMIIFVSVSMFDHKPERCPFGHSLWPGMAQVGWQPCICTAAQEAAER
Ga0062388_10297743313300004635Bog Forest SoilMIIFMPVPLFEHKPQRCPFGHPLWPGQARVGWKPCICTAA
Ga0066388_10784119813300005332Tropical Forest SoilMIGFVPVSIFEHKPQFCPFGHQLWPGGAQVSWKPCICTAAREGAERG
Ga0070691_1035664313300005341Corn, Switchgrass And Miscanthus RhizosphereMIIFVPVSIFEHKPQFCPFGHRLWPGGAQVSWKPCICAAAREGAGRGRGMGHVWVTCRACHDQL
Ga0070714_10028209013300005435Agricultural SoilMSVSLFEHKPQHCPFGHPLWPGQARVGWKPCICTAAREGAERGRGMGH
Ga0070714_10185532513300005435Agricultural SoilVPVSIFENKPEFCPFGHRLWPGGAQVSWKPCICGPAREGAERGRGLGHVQVSCRTC
Ga0070713_10095581023300005436Corn, Switchgrass And Miscanthus RhizosphereMIIFVPVSIFEHKPRSCPFGHQLWPGGAQVSWKPCICAAAREGAERG
Ga0070710_1091980523300005437Corn, Switchgrass And Miscanthus RhizosphereMIVFVPVSIFEHKPRSCPFGHALWPGGAQVSWKPCICAAAREGAERGRGMGHVWVTCRA
Ga0070706_10018818213300005467Corn, Switchgrass And Miscanthus RhizosphereMIVFVPVSIFEHKPQFCPFGHRLWPGGAQVSWKPCICAAAREGAE
Ga0070707_10233014623300005468Corn, Switchgrass And Miscanthus RhizosphereVSVSLFDYQPQHCPFGHLLWPGMAQVGWKPCICTPAQEAAERGRGMGAPPGVLQHLP
Ga0066699_1107112913300005561SoilMWLDAATLGMIVFVSVSIFEHKPEYCPFGHQLWPGRAQVSWKPCICTAAREGAERGRGMGHV
Ga0068854_10090779213300005578Corn RhizosphereMIIFVPVSIFEHKPQSCPFGHRLWPGGAQVSWKPCICAAAREGAERGRGMGHVWVTCRACHDQL
Ga0068856_10169974123300005614Corn RhizosphereMIVSVPVSIFENKPEFCPFGHRLWPGGAQVSWKPCICG
Ga0070766_1116683813300005921SoilMSVSLFEHKPQHCPFGHPLWPGQARVGWKPCICAAAREGAERGRGMGHLLVSCQTCHAQ
Ga0075017_10076219013300006059WatershedsMIVFVPVSIFEHKPEYCPFGHQLWPGRAQVSWKPCICTAAREGAERG
Ga0075015_10044172913300006102WatershedsMIVFVPVSIFEHKPEYCPFGHQLWPGRAQVSWKPCICAAAREGAERGRG
Ga0075014_10098079713300006174WatershedsMPVSLFEHKPQRCPFGHPLWPGQARVGWKPCICAAA
Ga0070712_10082334323300006175Corn, Switchgrass And Miscanthus RhizosphereMIIFVPVSIFEHKPRSCPFGHQLWPGGAQVSWKPCICAAAREGAERGRGMGHVWVTCRACHDQFR
Ga0070712_10110408513300006175Corn, Switchgrass And Miscanthus RhizosphereMIVFVPVSIFEHKPRSCPFGHVLWPGGAQVSWKPCICAAAREGAERGRGMGHVWVTCRACHDQFR
Ga0066665_1145345523300006796SoilMIVFVPVSIFEHKPRSCPFGHELWPGGAQVSWKPCICTAAREGADEAV
Ga0075424_10247067023300006904Populus RhizosphereMIIFVPVSIFEHKPQFCPFGHRLWPGGAQVSWKPCICAA
Ga0079219_1080267713300006954Agricultural SoilMIVSVPVSIFENKPEFCPFGHRLWPGGAQVSWKPCICGPAREGAERGR
Ga0079219_1126299913300006954Agricultural SoilMIVSVPVSIFENKPDFCPFGHRLWPGGAQVSWKPCICGPAREGA
Ga0099829_1010271333300009038Vadose Zone SoilMIVFVSVSIFEHKPEYCPFGHQLWPGRAQVSWKPCICAAAREGAERGRGMGH
Ga0066709_10233770823300009137Grasslands SoilMIVFVPVSIFEHKPRSCPFGHELWPGGVQVSWKPCICT
Ga0105241_1196743013300009174Corn RhizosphereMILFVSVSMFDHKPERCPFGHSLWPGMTQVGWQPCICTVAKEAAERGRGMGNLWVPSNPCHDQIWQTT
Ga0116214_132361213300009520Peatlands SoilMIGFVPVSIFEHKPEYCSFGHKLWPGRAQVSWKPCVCAAALEGAERGRGMGHVWVSCRTC
Ga0116214_134276613300009520Peatlands SoilMPVSLFEHKPQRCPFGHSLWPGQARVGWKPCICAAAQEGAERGRGMGHLLVSCQTCHAQLWDATF
Ga0116221_146420923300009523Peatlands SoilMIIFMPVSLFEHKPQHRPFGHPLWPGQARVGWKPCICAAAQEGAERG
Ga0116224_1010341043300009683Peatlands SoilMIIFMPVSLFEHKPQHCPFGHPLWPGHARVGWKPCICAAAQEGAERGRGMGH
Ga0116217_1040385033300009700Peatlands SoilMIIFMPVSLFEHKPQHCPFGHPLWPGHARVGWKPCICAAAQEGAERGRGMGHLLVSCQTC
Ga0116134_104738713300009764PeatlandMIVFVPVSIFEHKPEYCPFGHQLWPGRAQVSWKPCVCAAAREGAERGRGMG
Ga0134064_1039987613300010325Grasslands SoilMIIFVPVSIFEHKPQLCPFGHRLWPGGAQVSWKPCICAAAREGAEQGRGMGHVWVTCRACHDQL
Ga0074044_1103831023300010343Bog Forest SoilMIVFVPVSIFEHKPEYCPFGHQLWPGRAQVSWKPCVCAAAREGAERGRGMGHVWVTCRTCHDQ
Ga0126378_1298720613300010361Tropical Forest SoilMIVSVPVSIFENKPEFCPFGHRLWPGGAQVSWKPCICGPA
Ga0134125_1159965013300010371Terrestrial SoilMIIFVPVSIFEHKPRSCPFGHALWPGGAQVSWKPCICAAAREGAERG
Ga0134128_1007218413300010373Terrestrial SoilMILFVSVSMFDHKPEPCPFGHSLWPGMTQVGWQPCICTVAQETAERSRGMGTSGCHVTP
Ga0134126_1044252113300010396Terrestrial SoilMIVSVPVSIFENKPEFCPFGHRLWPGGAQVSWKPCICGP
Ga0134126_1147204113300010396Terrestrial SoilMIISMPVSLFENKPERCPFGHQLWPGRAQVSWKPCICTPAREAAARGRGM
Ga0138573_106368423300011089Peatlands SoilMFDHKPERCPFGHSLWPGMAQVGWQPCICTAAQEAAER
Ga0137383_1001650263300012199Vadose Zone SoilMIIFVAVSIFEHKPQFCPFGHQLWPGRAQVSWKPCICAAAREGAER
Ga0137363_1041240333300012202Vadose Zone SoilMIIFMPVSLFEHKPQHCPFGHPLWPGQARVGWKPCICAAAREGAERGRGMGH
Ga0137384_1046498913300012357Vadose Zone SoilMIVSVPVSIFENKPEFCPFGHRLWPGGAQVSWKPCICGPAREGAERGRGLGHVW
Ga0137360_1130185013300012361Vadose Zone SoilMIVSVPVSIFEHKPRSCPFGHVLWPGGAQVSWKPCICAAAREGAERG
Ga0164301_1139835323300012960SoilMIIFVPVSIFEHKPQFCPFGHRLWPGGAQDSWKPCICAAAREGAERGRGMGHVWVTCRAC
Ga0164306_1012269613300012988SoilMIIFVPVSIFEHKPRSCPFGHVLWPGGAQVSWKPCICAAAREGAERGRGMGHVWVT
Ga0137409_1021730313300015245Vadose Zone SoilMIIFVPVSIFEHKPQFCPFGHRLWPGGAQVSWKPCICAAA
Ga0134085_1025022813300015359Grasslands SoilMIIFVPVSIFEHKPQSCPFGHRLWPGGAQVSWKPCICAAAREGAERGRGMGHVWVTCRA
Ga0132255_10139152513300015374Arabidopsis RhizosphereMIIFVPVSIFEHKPQSCPFGHRLWPGGAQVSWKPCICAAAREGAERGRGMGHVR
Ga0182041_1084128213300016294SoilMIVLVPVSIFEHKPEFCPFGHQLWPGRAQVSWKPCICTAAREGAERGRG
Ga0182035_1127923213300016341SoilMIIFMSVSLFEHKPQHCPFGHPLWPGQARVGWKPCICAAAQEGAERGRGM
Ga0182040_1012041543300016387SoilMIIFMSVSLFEHKPQHCPFGHPLWPGQARVGWKPCIC
Ga0182038_1038637533300016445SoilMPVPLFLHEPQYCPFGHPLWPGLALVGWKPCICAPAREG
Ga0187820_122937123300017924Freshwater SedimentMPVSLFKHKPQRCPFGHPLWPGLALVGWKPCICAPAQEGAACGRGMG
Ga0187820_129583813300017924Freshwater SedimentMPVSLFEHKPQRCPFGHPLWPGQARVGWKPCICAAAREGAER
Ga0187807_130444223300017926Freshwater SedimentMPVSLFEHKPQRCPFGHLLWPGQARVGWKPCICAAAQEG
Ga0187806_124132313300017928Freshwater SedimentMIIFMPVSLFEHKPQHCPFGHPLWPGQARVGWKPCICAAAQEGAERGRGMGHLLVSCQTCHAQLWDAT
Ga0187808_1004590543300017942Freshwater SedimentMIIFMPVSLFEHKPQRCPFGHPLWPGQARVGWKPCICA
Ga0187808_1024268013300017942Freshwater SedimentMIIFMPVSLFEHKPQHCPFGHPLWPGQARVGWKPCICAAAQEGAERGRGMGHLLVSCQ
Ga0187879_1024857913300017946PeatlandMIVFVPVSIFEHKPEYCPFGHQLWPGRAQVSWKPCVCAAAREGAERGRGMGH
Ga0187817_1089424713300017955Freshwater SedimentMIIFMPVSLFEHKPQHCPFGHPLWPGQARVGWKPCI
Ga0187779_1013410113300017959Tropical PeatlandMIVFVSVSIFEHKPEFCPFGHQLWPGRAQVAWKPCICAPAREGAERGRGMGHVRVSCQTC
Ga0187781_1080407913300017972Tropical PeatlandMQVSLFQHKPLRCPFGHPLWPGLALVGWKPCICTPAREGAAHGRGMGHLWV
Ga0187780_1069817223300017973Tropical PeatlandMIIFMPVSLFEHKPQHCPFGHPLWPGQARVGWKPCIC
Ga0187780_1113846323300017973Tropical PeatlandMIIFMPVSLFEHKPQRCPFGHPLWPGQARVGWKPCICTAAQEGAERGRGMGH
Ga0187782_1071246613300017975Tropical PeatlandMIIFMPVSLFEHKPQYCPFGHPLWPGQARVGWKPCICAAAREGAERGRGM
Ga0187823_1002540543300017993Freshwater SedimentMPVSLFEHKPQRCPFGHSLWPGQARVGWKPCICAAAQEGAER
Ga0187816_1050633213300017995Freshwater SedimentMPVSLFEHKPQHCPFGHPLWPGQARVGWKPCICAAAREGAERGRGMGHLLVSCQ
Ga0187767_1033651513300017999Tropical PeatlandMPVSMFEHKPQRCPFGHPLWPGLARVGWKPCICAAALEGAERGRGMGHLWVS
Ga0187804_1059543213300018006Freshwater SedimentMIIFMPVSLFEHKPQRCPFGHPLWPGQARVGWKPCICAAAQEG
Ga0187805_1012070933300018007Freshwater SedimentMIIFMPVSLFEHKPQRCPFGHLLWPGQARVGWKPCICAAAQEGAERGRGMGHLLVSCQTCHA
Ga0187810_1041011723300018012Freshwater SedimentMIIFMPVSLFEHKPQHCPFGHPLWPGHARVGWKPCICAAAQEGAERGRGMGHLLVSCQ
Ga0187765_1032244223300018060Tropical PeatlandMIIFVPVSIFEHKPQVCPFGHRLWPGGAQVSWKPCIC
Ga0187772_1064928323300018085Tropical PeatlandMIVFVPVSIFEHRPEFCPFGHQLWPGLAQVSWKPCICAPA
Ga0187769_1062029413300018086Tropical PeatlandMQVSLFQHKPLRCPFGHPLWPGLALVGWKPCICTPAREGAAHGRGMGHLWVSCQTC
Ga0187768_113723223300020150Tropical PeatlandMTLGLGHDRFMPVSMFEHKPQRCPFGHPLWPGLARVGWKPCICTA
Ga0210407_1055179413300020579SoilMIVFVPVSIFEHKPRICPFGHELWPGGAQVSWKPCICAAAREGAE
Ga0210395_1132817123300020582SoilMIGFVPVSIFEHKPEYCPFGHQLWPGRAQVSWKPCICAAAREGAERG
Ga0210404_1081215513300021088SoilMSVSLFEHKPQHCPFGHALWPGQARVGWKPCICAAARE
Ga0210405_1009635813300021171SoilMSVSLFEHKPQHCPFGHPLWPGQARVGWKPCICAAAREGAERGRGMGHLLVSCQSCHAQRRD
Ga0210405_1038322413300021171SoilMIVFVSVSIFEHKPEYCPFGHQLWPGRAQVSWKPCVCAAAQEGAERGRGMGHVWVSCRTC
Ga0210405_1141727923300021171SoilMIVFVPVSIFEHKPQSCPFGHELWPGGAQVSWKPCICAAAREGAERGR
Ga0210408_1008244243300021178SoilMIVFVPVSIFEHKPQSCPFGHELWPGGAQVSWKPCICAAAR
Ga0210396_1150528623300021180SoilMIGFVPVSIFEHKPEYCPFGHQLWPGRAQVSWKPCICAAAR
Ga0210385_1035916543300021402SoilMIVFVSVSIFEHKPEYCPFGHQLWPGRAQVSWKPCVCAAAREGAERG
Ga0210397_1152390023300021403SoilMIIVMSVSLFSHRPQRCPFGHPLWPGQARVGWKPCICTPAREQAERGRGM
Ga0210387_1009678443300021405SoilMIGFVPVSIFEHKPEYCPFGHQLWPGRAQVSWKPCICAAAREGAERGRGMGHVWVICRTCHDQL
Ga0210384_1013280113300021432SoilMIVFVPVSIFEHKPQSCPFGHELWPGGAQVSWKPCICAAA
Ga0210384_1069656913300021432SoilMPVSLFEHKPQHCPFGHPLWPGQARVGWKPCICAAAR
Ga0210384_1073320513300021432SoilMIILMPVSLFEHKPQHCPFGHPLWPGQARVGWKPCICAAAREGAERGRGMGHLLVSCQACHV
Ga0213879_1020953323300021439Bulk SoilMPVSLFEHKPQRCPFGHPLWPGQARVGWKPCICAAAQEGAERG
Ga0210390_1020984633300021474SoilMIVFVSVSIFEHKPEYCPFGHQLWPGRAQVSWKPCVCAAAREGAERGRGM
Ga0210398_1028095013300021477SoilMSVSLFEHKPQHCPFGHALWPGQARVGWKPCICAA
Ga0210402_1179991423300021478SoilMIIFVPVSIFEHKPQFCPFGHRLWPGGAQVSWKPCICAAAREGAE
Ga0210410_1017343643300021479SoilMPVSLFEHKPQHCPFGHPLWPGQARVGWKPCICAAAREGAERGRGMGHLLVSCQTCHAQLRDAT
Ga0210409_1093163033300021559SoilMPVSLFEHKPQRCPFGHPLWPGQARVGWKPCICAAAQEGAERGRGMGHLLVSCQTCHA
Ga0207655_112465713300025728Miscanthus RhizosphereMIIFVPVSIFEHKPQFCPFGHRLWPGGAQVSWKPCICAAAREGA
Ga0207692_1021576123300025898Corn, Switchgrass And Miscanthus RhizosphereMIIFVPVSIFEHKPQFCPFGHRLWPGGAQVSWKPCICAAAREGAERGRGMGHVWVTCRAC
Ga0207692_1078224813300025898Corn, Switchgrass And Miscanthus RhizosphereMIIFVPVSIFEHKPRSCPFGHQLWPGGAQVSWKPCTCAAAREG
Ga0207692_1101769523300025898Corn, Switchgrass And Miscanthus RhizosphereMPVSLFLHKPQRCPFGHPLWPGRARVGWKPCLCTPAQEGAERGRGMGHLLVTCQACHAQRRDAT
Ga0207699_1072944523300025906Corn, Switchgrass And Miscanthus RhizosphereMIIFVPVSIFEHKPQFCPFGHRLWPGGAQVSWKPCICAAAREGAERGRGM
Ga0207684_1047027613300025910Corn, Switchgrass And Miscanthus RhizosphereMPVSLFEHKPQNCPFGHPLWPGQARVGWKPCICAAAREGAERGRGMGHLLVSCQTCHAQLRD
Ga0207663_1014552333300025916Corn, Switchgrass And Miscanthus RhizosphereMIIFVPVSIFEHKPQFCPFGHRLWPGGAQVSWKPCICAAAREGAERGRGMGHVW
Ga0207687_1160262823300025927Miscanthus RhizosphereMIIFVPVSIFEHKPQSCPFGHRLWPGGAQVSWKPCICAAAREGAERGRGMGHVRVTCRA
Ga0207700_1120288523300025928Corn, Switchgrass And Miscanthus RhizosphereMIIFVPVSIFEHKPRSCPFGHQLWPGGAQVSWKPCICAAAREGAERGRGMGHVWVTCRACHDQLR
Ga0207664_1188667213300025929Agricultural SoilMIVFVPVSIFEHKPRSCPFGHALWPGGAQVSWKPCICAAAREGAERGRGMGHVWVTCRACHDQ
Ga0207661_1005890313300025944Corn RhizosphereMIIFVPVSIFEHKPQSCPFGHRLWPGGAQVSWKPCICAA
Ga0209027_116065813300026300Grasslands SoilMIIFVPVSIFEHKPQFCPFGHRLWPGGAQVSWKPCICAAARE
Ga0257171_102470923300026377SoilMIVFVPVSIFEHKPQSCPFGHELWPGGAQVSWKPCICAAAREGAERGRGMGHVWVLCRACHDQLR
Ga0207746_102256113300026865Tropical Forest SoilMPVSLFLHEPQRCPFGHPLWPGLALVGWKPCICAPAREGAARGRGMGHLWVSCQTC
Ga0207822_103079613300026981Tropical Forest SoilMPVSLFLHEPQRCPFGHPLWPGLALVGWKPCICAPAREGAARG
Ga0209523_109229213300027548Forest SoilMIIFVPVSIFEHKPQFCPFGHRLWPGGAQVSWKPCICAAAREGAERGRGLGHVW
Ga0209420_106210413300027648Forest SoilMSVSLFEHKPQHCPFGHPLWPGHARVGWKPCICAAAQEGAERGRGMGHLLVS
Ga0209626_109710223300027684Forest SoilMIVFVPVSIFEHKPQSCPFGHELWPGGAQVSWKPCI
Ga0209177_1047720623300027775Agricultural SoilMIIFVPVSIFEHKPRSCPFGHVLWPGGAQVSWKPCI
Ga0209275_1029129513300027884SoilMPVSLFEHKPQHCPFGHPLWPGQARVGWKPCICAAAREGAERGRGMGHLLVSCQTCHAQL
Ga0209488_1029395633300027903Vadose Zone SoilMSVSIFEHKPERCPFGHPLWPGMAQVSWKPCICAPAREGAERGRGMGHVWVSCGTCHDLLWQT
Ga0307282_1065153213300028784SoilMIIFVPVSIFEHKPQFCPFGHRLWPGGAQVSWKPCICAAAREGAERGRGMGHVWVTCRACHDQLRQ
Ga0302232_1031656123300028789PalsaMIIFVSVSMFDHKPERCPFGHSLWPGMAQVGWQPCICTAAQEAAERGRGMGHLWVSCNT
Ga0302226_1002769253300028801PalsaMSVSLFEHKPQHCPFGHPLWPGHARVGWKPCICAAAQEGAERGRGMGHLLVSCQ
Ga0307308_1004720813300028884SoilMIIFVPVSIFEHKPQFCPFGHRLWPGGAQVSWKPCICAAAREGAGQGRGM
Ga0308309_1071189423300028906SoilMPVSLFEHKPQHCPFGHPLWPGQARVGWKPCICAAAREGAERGRGMGH
Ga0308309_1147813913300028906SoilMIVFVSVSIFEHRPEYCPFGHQLWPGRAQVSWKPCVCAAAQEGAERGRGMGHVW
Ga0310037_1004690023300030494Peatlands SoilMIIFVSVSMFDHKPERCPFGHSLWPGMAQVGWQPCICTAAQEAAERGCGM
Ga0311370_1113442413300030503PalsaGMIIFVSVSMFDHKPERCPFGHSLWPGMAQVGWQPCICTAAQEAAERGRGMGHLWVSCNT
Ga0311370_1212410413300030503PalsaMIIFMPVPLFEHKPQSCPFGHALWPGQARVGWKPCICSAAQEGAERGRG
Ga0311356_1186260523300030617PalsaMIIFMPVPLFEHKPQSCPFGHPLWPGQARVGWKPCICTAAQEGAERGRG
Ga0302317_1013032113300030677PalsaMSVSLFEHKPQHCPFGHPLWPGHARVGWKPCICAAAQEGAE
Ga0302325_1064741733300031234PalsaMIIFMPVPLFEHKPQSCPFGHALWPGQARVGWKPCICTAAQ
Ga0318534_1021891613300031544SoilMIIFMSVSLFEHKPQHCPFGHPLWPGQARVGWKPCICAAAQEGAERGRGMGHV
Ga0318534_1029027613300031544SoilMIVFVPVSIFEHKPQFCPFGHRLWPGGAQVSWKPCI
Ga0318538_1035692523300031546SoilMIIFMSVSLFEHKPQHCPFGHPLWPGQARVGWKPCICAAAQEGAERGRGMGHVLVSCQ
Ga0318573_1038828323300031564SoilMIIFMSVSLFEHKPQHCPFGHPLWPGQARVGWKPCICAAAQEGA
Ga0318555_1038362113300031640SoilMIVFVPVSIFEHKPQFCPFGHRLWPGGAQVSWKPCICAAAREGAERGRG
Ga0318555_1055699113300031640SoilMIIFMPVSIFEHKPQFCPFGHQLWPGGAQVSWKPCICPAAREGAERGRGMG
Ga0318561_1042337633300031679SoilMPVSLFEHKPQRCPFGHPLWPGQARVGWKPCICAAAREGAERGRGMGHLLVSCQTCHAQL
Ga0318560_1059366323300031682SoilMIIFMPVSLFEHKPQHCPFGHPLWPGQARVGWKPCICTAAQEGAERGRGMGHLLVSCQTCHAQL
Ga0310686_10568085033300031708SoilMVVSLFKYQPKRCPFGHPLWPGLALVGWKPCICAPAREGAARGEGMGHLW
Ga0310686_11549338113300031708SoilMPVSLFEHKPQRCPFGHPLWPGQARVGWKPCICAAAQEGAERGRGMGNLLVSCQTCHAQLWDAT
Ga0318493_1002190043300031723SoilMIIFMSVSLFEHKPQHCPFGHPLWPGQARVGWKPCICAAAQEGAERGRGMGHLLVSCQTCHAQL
Ga0318493_1017274413300031723SoilMIIFMPVSLFEHKPQHCPFGHPLWPGQARVGWKPCICTAAQEGAERGRGMGHLLVSCQTC
Ga0318493_1079046413300031723SoilMIIFMSVSLFEHKPQHCPFGHPLWPGQARVGWKPCICAAAQEGAERGRGMGHVLVSCQTCHAQLW
Ga0318492_1082232323300031748SoilMIIFMSVSLFEHKPQHCPFGHPLWPGQARVGWKPCICAAAQEGAERGRGMGHVL
Ga0318494_1072941413300031751SoilMIIFMPVSIFEHKPQFCPFGHQLWPGGAQVSWKPCI
Ga0318566_1047074613300031779SoilMPVPLFLHEPQYCPFGHPLWPGLALVGWKPCICAPAREGAARGRGMGHLW
Ga0318550_1021227713300031797SoilMIIFMPVSLFEHKPQHCPFGHPLWPGQARVGWKPCICTAAQEGAERGR
Ga0318550_1046389613300031797SoilMPVPLFLHEPQYCPFGHPLWPGLALVGWKPCICAPAREGAARGRGMGHLWVSCQTCHAQL
Ga0318497_1041578813300031805SoilMIIFMPVSIFEHKPQFCPFGHQLWPGGAQVSWKPCIC
Ga0318564_1013211723300031831SoilMIIFMSVSLFEHKPQHCPFGHPLWPGQARVGWKPCICAAAQEGAERGRADT
Ga0318499_1035955723300031832SoilMPVSLFEHKPQRCPFGHSLWPGQARVGWKPCICAAAREGAERGRGMGHL
Ga0318512_1057731113300031846SoilMIVSVPVSIFEHKPEFCPFGHELWPGRAQVSWKPCICPAAREGAERGRGMGHV
Ga0318495_1042932213300031860SoilMIVLVPVSIFEHKPEFCPFGHQLWPGRAQLGWKPCICTA
Ga0318536_1002409543300031893SoilMIIFMSVSLFEHKPQHCPFGHPLWPGQARVGWKPCICAAAQEGAERGRGMGH
Ga0318551_1038879023300031896SoilMIVFVPVSIFEHKPQFCPFGHRLWPGGAQVSWKPCICA
Ga0318551_1056813723300031896SoilMIIFMSVSLFEHKPQHCPFGHPLWPGQARVGWKPCICAAAQEGAERGRGMGHVLV
Ga0318520_1091471313300031897SoilMIIFVPVSIFEHKPQFCPFGHQLWPGGAQVSWKPCICAPA
Ga0306921_1188304523300031912SoilMPVSLFEHKPQRCPFGHPLWPGQARVGWKPCICAAAREGAERGRGMGHLLVSCQTCHAQ
Ga0310916_1145060213300031942SoilMIIFMPVSLFEHKPQHCPFGHPLWPGQARVGWKPCICTAAQEGAER
Ga0310910_1097758023300031946SoilMIVFVPVSIFEHKPQFCPFGHRLWPGGAQVSWKPCICAAAREGAERGR
Ga0318545_1029462823300032042SoilMIIFMSVSLFEHKPQHCPFGHPLWPGQARVGWKPCI
Ga0318558_1062543213300032044SoilMIIFVPVSIFEHKPQFCPFGHQLWPGGAQVSWKPCICAPAREGAERGR
Ga0318577_1003449913300032091SoilMIIFMSVSLFEHKPQHCPFGHPLWPGQARVGWKPCICAAAQEG
Ga0318577_1023030823300032091SoilMPVSLFEHKPQRCPFGHSLWPGQARVGWKPCICAAAQEGAERGRGMGHLL
Ga0318540_1030433113300032094SoilMIVLVPVSIFEHKPEFCPFGHQLWPGRAQVSWKPCICTAAREGAERGRGMGH
Ga0307472_10161536123300032205Hardwood Forest SoilMIIFVPVSIFEHKPQSCPFGHRLWPGGAQVSWKPCI
Ga0306920_10211116913300032261SoilMIIFMPVPLFEHKPQHCPFGHPLWPGQARVGWKPCICAAAQEGAERGRGMGH
Ga0335085_1126049313300032770SoilMIIFVSVSIFEHKPQVCPFGHRLWPGGAQVSWKPCICAPAREGAERG
Ga0335082_1005578513300032782SoilMIVSVPVSIFEHKPVFCPFGHELWPGHAQVSWKPCICT
Ga0335078_1152862913300032805SoilMIIFVPVSIFEHKPEVCPFGHQLWPGGAQVSWKPCICAPAREGAERGRGMG
Ga0335080_1148739313300032828SoilMDGPGLGMIIFVPVSIFEHRPEFCPFGHQLWPGRAQVSWKPCICAAAREGAERGRGMG
Ga0335081_1000705013300032892SoilMDGPGLGMIIFVPVSIFEHRPEFCPFGHQLWPGRAQVSWKPCICAAAREGAERGRGLGHVRV
Ga0335083_1010841813300032954SoilMIIFVPVSIFEHKPQFCPFGHQLWPGGAQVSWKPCICAPAREGAERGRGMGHVWVTCRACHDQLRQ
Ga0335083_1151759723300032954SoilMIVSVPVSIFEHKPEFCPFGHELWPGRAQVSWKPCICAAAREGAERGRGMGHVRVSCRTC
Ga0335076_1086287023300032955SoilMPVSLFEHKPPRCPFGHPLWPGQARVGWKPCICAAAQEGAERGRGMGHVLVSCQTCH
Ga0335076_1112630123300032955SoilMNSDYDMIICMPAPLFEHKPQHCPFGHPLWPGQARVG
Ga0335076_1172339513300032955SoilMIVSVPVSIFEHRPEFCPFGHELWPGHAQVSWKPCICAPAQEGAERGRGMGHVRVSCRA
Ga0370483_0072739_914_11083300034124Untreated Peat SoilMSVSLFEHKPQHCPFGHPLWPGHARVGWKPCICAAAQEGAERGRGMGHLLVSCQTCHAQRWDATF


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.