NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F032327

Metagenome Family F032327

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F032327
Family Type Metagenome
Number of Sequences 180
Average Sequence Length 54 residues
Representative Sequence VVEAKQLVVYAQPSKDPSSGLEIRLAWEIDVTNGPISKVYLDAISDEIIATS
Number of Associated Samples 139
Number of Associated Scaffolds 180

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 82.22 %
% of genes from short scaffolds (< 2000 bps) 79.44 %
Associated GOLD sequencing projects 119
AlphaFold2 3D model prediction Yes
3D model pTM-score0.71

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (82.778 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere
(8.333 % of family members)
Environment Ontology (ENVO) Unclassified
(46.667 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(70.000 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82
1JGI24736J21556_10603002
2JGI24749J21850_10152541
3soilL1_100447962
4Ga0058689_101338291
5Ga0062589_1005269392
6Ga0062591_1011113741
7Ga0062594_1012221541
8Ga0066671_100699244
9Ga0065704_106732091
10Ga0065712_100515581
11Ga0065715_101673843
12Ga0065715_108909172
13Ga0065707_106705682
14Ga0070676_104427121
15Ga0070670_1020841492
16Ga0066388_1035517471
17Ga0066388_1074340732
18Ga0070680_1009892212
19Ga0070689_1000634321
20Ga0070689_1002537363
21Ga0070687_1002161812
22Ga0070687_1002484871
23Ga0070687_1010636831
24Ga0070661_1000992131
25Ga0070692_100319901
26Ga0070692_112663202
27Ga0070671_1006761401
28Ga0070701_101541033
29Ga0070700_1009072571
30Ga0070700_1017989722
31Ga0070694_1004961542
32Ga0070663_1020196381
33Ga0068867_1002707923
34Ga0068867_1010221411
35Ga0070685_107111121
36Ga0070707_1017145202
37Ga0070699_1012037722
38Ga0068853_1021289222
39Ga0070686_1008288061
40Ga0070695_1012811262
41Ga0070693_1013834711
42Ga0070704_1004232421
43Ga0058697_102952792
44Ga0068855_1016413072
45Ga0070664_1009374351
46Ga0070664_1019547282
47Ga0068857_1009168821
48Ga0068854_1011183272
49Ga0068852_1020666661
50Ga0068859_1002467671
51Ga0068859_1012308081
52Ga0068859_1020757451
53Ga0068859_1021723971
54Ga0068864_1003166153
55Ga0068861_1026130561
56Ga0068860_1005750651
57Ga0068860_1014111681
58Ga0068862_1011173791
59Ga0068862_1025050901
60Ga0075293_10050051
61Ga0075300_10724282
62Ga0075289_10439181
63Ga0081455_108504241
64Ga0081539_104961281
65Ga0075417_107389931
66Ga0075422_100345431
67Ga0079222_117793192
68Ga0079222_118764161
69Ga0079221_111574692
70Ga0079220_117347391
71Ga0075428_1011154752
72Ga0079215_108348672
73Ga0079219_117031822
74Ga0075419_106592141
75Ga0105240_103215444
76Ga0105245_112426472
77Ga0105245_119034591
78Ga0105247_105216681
79Ga0105247_109817381
80Ga0114129_117051731
81Ga0105243_116587811
82Ga0105243_122683252
83Ga0105241_103622021
84Ga0105241_111894832
85Ga0105241_116963021
86Ga0105241_121322411
87Ga0105241_121431702
88Ga0105237_111388211
89Ga0105237_113586251
90Ga0105238_100230428
91Ga0126307_110196341
92Ga0126307_116313332
93Ga0126313_114785081
94Ga0126304_101310831
95Ga0126311_111063612
96Ga0126384_120353572
97Ga0126382_121142341
98Ga0126382_122204091
99Ga0126306_107275472
100Ga0126376_115244012
101Ga0126377_116020572
102Ga0134128_130766271
103Ga0105239_106730043
104Ga0105239_113472982
105Ga0134126_111527462
106Ga0157291_101599111
107Ga0126375_116696271
108Ga0164298_115788431
109Ga0164299_114949931
110Ga0164308_122962742
111Ga0164304_112782241
112Ga0157371_113355301
113Ga0163162_117505571
114Ga0163162_121631891
115Ga0163162_124081472
116Ga0157375_114377991
117Ga0157375_132451162
118Ga0120183_10013332
119Ga0120188_10101172
120Ga0075342_12177451
121Ga0163163_105368051
122Ga0163163_107661473
123Ga0157380_111003051
124Ga0182000_102095952
125Ga0157377_113137722
126Ga0157376_121576621
127Ga0182007_104074392
128Ga0182005_11728061
129Ga0132258_133757582
130Ga0132257_1006615653
131Ga0132257_1039784372
132Ga0132255_1025522672
133Ga0132255_1040321722
134Ga0132255_1058034662
135Ga0163161_107452381
136Ga0190275_113563001
137Ga0190268_107228322
138Ga0187893_106331372
139Ga0207682_104681802
140Ga0207647_101826773
141Ga0207647_102431382
142Ga0207643_101668483
143Ga0207654_110083962
144Ga0207695_111010631
145Ga0207660_109469951
146Ga0207662_100880164
147Ga0207649_105743132
148Ga0207646_113015212
149Ga0207694_100584385
150Ga0207694_100711335
151Ga0207650_101278771
152Ga0207650_108157202
153Ga0207644_103511201
154Ga0207690_103860693
155Ga0207709_112750482
156Ga0207670_109642492
157Ga0207679_109408962
158Ga0207679_117605642
159Ga0207651_100755701
160Ga0207712_104635463
161Ga0207639_121645231
162Ga0207641_104407414
163Ga0207641_121798452
164Ga0207674_104031953
165Ga0207674_105296391
166Ga0207675_1005680331
167Ga0209074_101115911
168Ga0207428_109958211
169Ga0268265_125896251
170Ga0268259_100722911
171Ga0310813_115857642
172Ga0310900_105636032
173Ga0310884_104240531
174Ga0307409_1015469862
175Ga0307416_1005034683
176Ga0307416_1009066472
177Ga0310902_100674274
178Ga0315910_106228241
179Ga0310810_107423411
180Ga0310810_112239982
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 3.75%    β-sheet: 40.00%    Coil/Unstructured: 56.25%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

5101520253035404550VVEAKQLVVYAQPSKDPSSGLEIRLAWEIDVTNGPISKVYLDAISDEIIATSSequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.71
Powered by PDBe Molstar

Structural matches with SCOPe domains



 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
82.8%17.2%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Soil
Soil
Terrestrial Soil
Tropical Forest Soil
Serpentine Soil
Terrestrial
Switchgrass Rhizosphere
Soil
Agricultural Soil
Sugarcane Root And Bulk Soil
Soil
Soil
Natural And Restored Wetlands
Rice Paddy Soil
Tropical Forest Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Microbial Mat On Rocks
Arabidopsis Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Tabebuia Heterophylla Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn, Switchgrass And Miscanthus Rhizosphere
Switchgrass Rhizosphere
Switchgrass Rhizosphere
Populus Rhizosphere
Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Corn Rhizosphere
Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Agave
Agave
6.1%3.3%3.3%3.9%6.7%5.0%3.3%6.1%7.8%3.3%2.8%8.3%3.3%4.4%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI24736J21556_106030023300001904Corn RhizosphereNHIKTQPNLSLPTNAVVEARQLVVYAQPSKVPPSGLEIRLAWEVDVTNAPVRKVYLDAISDEIIATS*
JGI24749J21850_101525413300002076Corn, Switchgrass And Miscanthus RhizospherePNGLEIRLAWEIEVTNAPISKVYLDALSDEIIATT*
soilL1_1004479623300003267Sugarcane Root And Bulk SoilVEAKQLVVYVQPSKDPPSGLAIRLAWEIDVTNGPLSKVYLDAISDEIIATS*
Ga0058689_1013382913300004016AgaveTHVKTVTVVNTAGQQQNLSLPANATVEARQLVVYAQPSKVPPSGLEIRLAWEIDVTNGPITKVYLDAISDEIIATS*
Ga0062589_10052693923300004156SoilARQLVVYAQPSKDPSSGLEFRLAWEIDVQNGPINKVYLDAVSGEIIATS*
Ga0062591_10111137413300004643SoilASATVTAQQLVVYAQPSKDPAGGLQIRLAWEIEVTNAPIKQVYLDAISDEIIATS*
Ga0062594_10122215413300005093SoilQPSLPANATVEARQLVVYAQPSKDPSNGLQIRLAWELEVTGGPVTRVYLDAISDEIIATS
Ga0066671_1006992443300005184SoilNATAEARQLVVYAQPPNDPSRGLQIRLAWEIDVTNGPISKVYLDAISNETIAAW*
Ga0065704_1067320913300005289Switchgrass RhizospherePSKDPPSGLAIRLAWEIEVTNGPLSKVYLDAISDEIIATS*
Ga0065712_1005155813300005290Miscanthus RhizosphereATVEARQLVVYVQPSKDPPSGLTFRLAWELDVTNGPITKVYLDALSDEIIATT*
Ga0065715_1016738433300005293Miscanthus RhizosphereLPANATVEAKQLVVYVQPSKDPASGLAIRLAWEIDVANGPISKVYLDAISDEIIATS*
Ga0065715_1089091723300005293Miscanthus RhizosphereSLPANAVVEARQLVVYAQPSKVPPSGLEIRLAWELDVTNGPISKVYLDAISDEIIATS*
Ga0065707_1067056823300005295Switchgrass RhizosphereYAQPSKDPSSGLEFRLAWEIDVQNGPINKVYLDAVSGEIIATS*
Ga0070676_1044271213300005328Miscanthus RhizosphereAKVEARQLVVYAQPSKDPPNGLEIRLAWEIEVTNAPISKVYLDALSDEIIATT*
Ga0070670_10208414923300005331Switchgrass RhizosphereTVSLPANATVEARQLVVYAQPSKTPPSGLEIRLAWEIDITNGPLTKVYLDAISDEIIATT
Ga0066388_10355174713300005332Tropical Forest SoilSKQPSSGLEVRLAWEIEVSGNPVTRVYLDAISDEIIATS*
Ga0066388_10743407323300005332Tropical Forest SoilKTQQAANAKIEARQLVVYAQPSKVPPSGLEIRLAWEIEVTNGPITKVYLDALSDEIIATT
Ga0070680_10098922123300005336Corn RhizosphereGNQQQSISLPANANVEAKQLVVYAQPSKTPPSGLEIRLAWEIDITNGPITKVYLDAISDEIIATS*
Ga0070689_10006343213300005340Switchgrass RhizosphereTGQQQTISLPANAVVEARQLVIYAQPSKVPPSGLEIRLAWELDVTNGPISKIYLDAISDEIIATS*
Ga0070689_10025373633300005340Switchgrass RhizosphereVQARQLVVYAQPSKDPSSGLEFRLAWEIDVQNGPINKVYLDAVSGEIIATS*
Ga0070687_10021618123300005343Switchgrass RhizosphereEARELVVYASPSPSGLQVRIAWEIDVSNGPVTKVYLDAISEEIIATS*
Ga0070687_10024848713300005343Switchgrass RhizosphereANAKVEARQLVVYAQPSKDPPSGLTIRLAWEIEVTNGPITKVYLDALSDEIIATT*
Ga0070687_10106368313300005343Switchgrass RhizosphereAQPSKDPSSGLEIRLAWEIEITRGPVTRVYLDAISDEIIATS*
Ga0070661_10009921313300005344Corn RhizosphereQQSVSLPANATVEAKQLVVYAQPSKDPPSGLTLRLAWEIDVTNGPIHKVYLDAISDEIIATT*
Ga0070692_1003199013300005345Corn, Switchgrass And Miscanthus RhizosphereSPSKDPPSGLQIRIAWEIDVVNGPITKVYLDAISEEIIATA*
Ga0070692_1126632023300005345Corn, Switchgrass And Miscanthus RhizosphereSATVDARQLVVYAQPSKDPSSGLQIRLAWEIEVTNGPIKWVYLDAISDEIIAIS*
Ga0070671_10067614013300005355Switchgrass RhizosphereVYAQPSKDPPNGLEIRLAWEIEVTNAPISKVYLDALSDEIIATT*
Ga0070701_1015410333300005438Corn, Switchgrass And Miscanthus RhizosphereVKTQQAVSLPGSAKAEARQLVVYAQPSKDAPSGLEIRLAWEIDVTNAPISKVYLDALSDEIIATT*
Ga0070700_10090725713300005441Corn, Switchgrass And Miscanthus RhizosphereARPAKDPPAGLELRLAWEIDVNNGPIKKLYLDAVSEEIIATS*
Ga0070700_10179897223300005441Corn, Switchgrass And Miscanthus RhizosphereVYAQPSKVPPSGLEIRLAWELDVTNGPVSKVYLDAISDEIIATS*
Ga0070694_10049615423300005444Corn, Switchgrass And Miscanthus RhizosphereLSLPANATADASQLVVYARSAKDPSSGLEIRLAWEVEISNGPIKRVYLDAISDDIIATS*
Ga0070663_10201963813300005455Corn RhizospherePSKDPSSGLQIRLAWEIEVTNGPVKWVYLDAISDEIIAMS*
Ga0068867_10027079233300005459Miscanthus RhizosphereVKTQQVVSLPGSAKVEARQLVVYAQPSKSSPGGLELRLAWEVEVTNASVSKVYLDALSDEIIATT*
Ga0068867_10102214113300005459Miscanthus RhizosphereVKTQQVVSLPGSAKVEARQLVVYAQPSKSSPSGLELRLAWEVEVTNASMSKVYLDALSDEIIATT*
Ga0070685_1071111213300005466Switchgrass RhizosphereQLVVYAQPSKDPPSGLEFRLAWEIDVQNGPINKVYLDAVSGEIIATS*
Ga0070707_10171452023300005468Corn, Switchgrass And Miscanthus RhizosphereSTVAARQLVVYAQPSKNPPSGLEIRLAWEIDVTNAPISKVYLDAISGEIIATS*
Ga0070699_10120377223300005518Corn, Switchgrass And Miscanthus RhizosphereAKVEARQLVVYAQPSKSSPGGLELRLAWEVEVTNAPVSKVYLDALSDEIIATT*
Ga0068853_10212892223300005539Corn RhizosphereQLVVYAQPSKDPSSGLEFRLAWEIDVQNGPINKVYLDAVSGEIIATS*
Ga0070686_10082880613300005544Switchgrass RhizosphereADHVKTQQVVSLPGSAKVEARQLVVYAQPSKSSPGGLELRLAWEVEVTNASVSKVYLDALSDEIIATT*
Ga0070695_10128112623300005545Corn, Switchgrass And Miscanthus RhizosphereANATADGSQLVVYPRPAKDPSSGLEIRLAWEVEITNGPIKRVYLDAISNDIIATS*
Ga0070693_10138347113300005547Corn, Switchgrass And Miscanthus RhizosphereAQPSKDPSSGLEFRLAWEIDVQNGPINKVYLDAVSGEIIATS*
Ga0070704_10042324213300005549Corn, Switchgrass And Miscanthus RhizosphereKTQPLTLVNTSGQQQNVTLPANATVEAKQLVVYAQPAKDPAGGLTIRLAWEIDITHGPVTKVYLDAISDEIIATS*
Ga0058697_1029527923300005562AgaveTDASGRQQTVSLPANAAVNAPQLVVYAQPSKDPPSGLEMRLAWEIEVANGPVNRVYLDAISDEIIATS*
Ga0068855_10164130723300005563Corn RhizosphereVYAQPSKSSPSGLELRLAWEVEVTNASVSKVYLDALSDEIIATT*
Ga0070664_10093743513300005564Corn RhizosphereITFTNATGQQQTISLPANAVVEAHQLVVYAQPSKVPPSGLEIRLAWELDITNGPISKVYLDAISDEIIATS*
Ga0070664_10195472823300005564Corn RhizosphereLSLPANATVDAKQLVVYAQPAKDTATGLQIRLAWEVEITGGPVKQIYLDAISGEIIATS*
Ga0068857_10091688213300005577Corn RhizosphereTAKVEAKQLVVYAQPSKDPASGLQIRLAWEIDVTNGPITKVYLDAISDEIIATS*
Ga0068854_10111832723300005578Corn RhizosphereVSLPANAVVEARQLVVYAQPSKVPPSGLEIRLAWELDVTNGPISKVYLDAISDEIIATS*
Ga0068852_10206666613300005616Corn RhizosphereANATVEAKQLVVYVQPSKDPPSGLVIRLAWEIDVTNGPLSKVYLDAISDEIIATS*
Ga0068859_10024676713300005617Switchgrass RhizosphereNAKVEARQLVVYAQPSKDPSSGLEIRLAWEIEITGGPVTRVYLDAISDEIIATS*
Ga0068859_10123080813300005617Switchgrass RhizosphereQLVVYAQPSKVPPSGLEIRLAWEVDVTNGPVSKVYLDAISDEIIATS*
Ga0068859_10207574513300005617Switchgrass RhizosphereVYAQPSKDPSSGLEFRLAWEIDVQNGPINKVYLDAVSGEIIATS*
Ga0068859_10217239713300005617Switchgrass RhizosphereDHVKAQQQTLSLPANATVEARQLVVYAQPSKDPANGLQIRLAWELEVTNGPVTRVYLDAISDEIIATS*
Ga0068864_10031661533300005618Switchgrass RhizosphereRQLVVYAQPSKVPPSGLEIRLAWELDVTNGPVSKVYLDAISDEIIATS*
Ga0068861_10261305613300005719Switchgrass RhizosphereVEARQLVVYAQPSKDPSSGLEIRLAWEIEITGGPVTRVYLDAISDEIIATS*
Ga0068860_10057506513300005843Switchgrass RhizosphereQPIAFTNATGQQQSLTLPANAVVEARQLVVYAQPSKVPPSGLEIRLAWELDVTNGPISKVYLDAISDEIIATS*
Ga0068860_10141116813300005843Switchgrass RhizosphereTVDARQLVVYAQPSKDPPSGLQIRLAWEIEVTNGPVKWVYLDAISDEIIAMS*
Ga0068862_10111737913300005844Switchgrass RhizosphereNAQTQTLSLPGNATADASQLVVYARPAKDAPSGLEIRLVWEVEITNGPIKRVYLDAISNDIIATS*
Ga0068862_10250509013300005844Switchgrass RhizosphereQNVTLPANATVEAKQLVVYAQPAKDPAGGLTIRLAWEIDITHGPVTKVYLDAISDEIIATS*
Ga0075293_100500513300005875Rice Paddy SoilVYAQPANDPSSGLTLRLGWEIEVTNGPISKVYLDAISDEIIATT*
Ga0075300_107242823300005876Rice Paddy SoilSGLTLRLGWEIEVTNGPISKVYLDAISDEIIATT*
Ga0075289_104391813300005888Rice Paddy SoilLNTTGQPQTISLPANATVEARQLVVYAQPANDPSSGLTLRLGWEIEVTNGPISKVYLDAISDEIIATT*
Ga0081455_1085042413300005937Tabebuia Heterophylla RhizosphereKSQSITITDVNNRQQTSSLPANATIEARELVVYAKPAKDPPSGLEMRIAWEIDVTNGPIKKLYLDAVSEEIIATS*
Ga0081539_1049612813300005985Tabebuia Heterophylla RhizosphereATGQQQSVSLPANAVVEARQLVVYAQPSKVPPSGLEIRLAWELDITNGFVSKVYLDAISDEIIATS*
Ga0075417_1073899313300006049Populus RhizosphereSVSLPPNATVEARQLVVYASPSTNGLQVRIAWEIDVANGPITKVYLDAISEEIIATS*
Ga0075422_1003454313300006196Populus RhizospherePSKVPPSGLEIRLAWELDVTNGPVSKVYLDAISDEIIATS*
Ga0079222_1177931923300006755Agricultural SoilPANGLQIRLAWEVEVANGPVTRVYLDAISEEIIATS*
Ga0079222_1187641613300006755Agricultural SoilNKGVTASGQQQTLSLPASAKVEAKQLVVYAQPSKDPASGLQIRRAWEIDVTNGPIAKVYLDAISDEIIATS*
Ga0079221_1115746923300006804Agricultural SoilNIKAQQTLALPANATVEPKQLVVYVQPAKGAVNGLQIRLAWEVEVTGGPVKQVYLDAISEEIIATS*
Ga0079220_1173473913300006806Agricultural SoilTFTDANGQQQTLSLPANATVEAQQLVVYAQPSKDPSSGLQIRLAWELEVTNGPVTRVYLDAISDEIIATS*
Ga0075428_10111547523300006844Populus RhizosphereNATVEARQLVVYAQPSKQPSSGLEIRLAWEIEITGGPVTRVYLDAISDAIIATS*
Ga0079215_1083486723300006894Agricultural SoilEPAKDPPSSLEMRLAWEIDITNAPIKKVYLDAISEQIIATS*
Ga0079219_1170318223300006954Agricultural SoilYVQPAKDTATGLQIRLAWEVEITGGPVKQIYLDAISGEIIATS*
Ga0075419_1065921413300006969Populus RhizosphereSSGLEIRLAWEIEITGGPVTRVYLDAISDEIIATS*
Ga0105240_1032154443300009093Corn RhizosphereTADQAVTHVKTQQPASAKVEARQLVVYAQPSKSSPSGLELRLAWEVEVTNAPVSKVYLDALSDEIIATT*
Ga0105245_1124264723300009098Miscanthus RhizosphereNRVKTQPLTTTNGQQAVSLPPNATVEARQLVVYASPSTNGLQVRIAWEIDVANGPITKVYLDAISEEIIATS*
Ga0105245_1190345913300009098Miscanthus RhizosphereRQLVVYAQPSKDPSSGLEFRLAWEIDVQNGPINKVYLDAVSGEIIATS*
Ga0105247_1052166813300009101Switchgrass RhizosphereTGQQQTVTLPTNAVVEARQLVVYAQPSKAPPSGLEIRLAWELDVTNGPVSKVYLDAISDEIIATS*
Ga0105247_1098173813300009101Switchgrass RhizosphereSKDPASGLQIRLAWEIDVTNGPLKKVYLDAISDEVIAAS*
Ga0114129_1170517313300009147Populus RhizospherePVTSTNATGQQQSVSLPANAVVEAKQLVVYAQPSKDPPSGLEIRLAWEIDVTNGPISKVYLDAISDEIIATS*
Ga0105243_1165878113300009148Miscanthus RhizosphereRQLVVYAQPSKDPSNGLQIRLAWEIEVTNGPIKWVYLDAISDEIIATS*
Ga0105243_1226832523300009148Miscanthus RhizosphereQPFTTVNATGQQQTVSLPTNAAVQARQLVVYAQPSKDPSSGLEFRLAWEIDVQNGPINKVYLDAVSGEIIATS*
Ga0105241_1036220213300009174Corn RhizosphereTQTFSLPANATADASQLVVYARSAKDPSSGLEIRLAWEVEISNGPIKRVYLDAISDDIIATS*
Ga0105241_1118948323300009174Corn RhizosphereRQLVVYAQPAKDPSSGLALRLAWELDIKNGPITKVYLDAISDEIIATT*
Ga0105241_1169630213300009174Corn RhizospherePDVLELRLAWEIETPNSGVKKVYLDAISDEVIAVSNVA*
Ga0105241_1213224113300009174Corn RhizosphereNGLQIRLAWEVEVTGGPVTRVYLDAISEEIIATS*
Ga0105241_1214317023300009174Corn RhizosphereSLPANATVEARQLVVYALPSKDPSSGLQIRLAWELEVTGGPVTRVYLDAISDEIIATS*
Ga0105237_1113882113300009545Corn RhizosphereQPSKVPPSGLEIRLAWEVDVTNGPVSKVYLDAISDEIIATS*
Ga0105237_1135862513300009545Corn RhizosphereKPSKDPPSGLTLRLAWEIDVTNGPIHKVYLDAISDEIIATT*
Ga0105238_1002304283300009551Corn RhizosphereVYAQPSKVPPSGLEIRLAWEIDVTNGPITKIYLDALSDEIIATT*
Ga0126307_1101963413300009789Serpentine SoilAVTVMDVNSRQQTYSLPANATVEARQLVVYAQPSKDPPSGLQIRLAWEIDITNGPIKKVYLDSISGEVIAAS*
Ga0126307_1163133323300009789Serpentine SoilLVVYVQPSKNPPSGLEIRLAWEIDVTNGPVSKIYLDALSDEIIATS*
Ga0126313_1147850813300009840Serpentine SoilASGLAIRLAWELDVTNGPISRVYLDAISDEIIATS*
Ga0126304_1013108313300010037Serpentine SoilPSKDPSSGLEIRLAWEIDVTNSPIKKVYLDAISQEIIAIS*
Ga0126311_1110636123300010045Serpentine SoilVEAQQLVVYAQPAKDAPGGLQIRLAWEINVTNSPIKKVYLDAISDEIIAAS*
Ga0126384_1203535723300010046Tropical Forest SoilAIQRARAVDRMRDAVVEARQLVVYVQPSKVPPSGLEIRLAWELDVTNGPLSKVYLDAISDEIIATS*
Ga0126382_1211423413300010047Tropical Forest SoilARQLVVYAQPSRVPPSGLEIRLAWEIDITNGPVSKVYLDAISDEIIATS*
Ga0126382_1222040913300010047Tropical Forest SoilNAAIEARQLVVYAQPSKNQAGGLEIRLAWELGVSGGPVSTVYLDAISDEIIATS*
Ga0126306_1072754723300010166Serpentine SoilATGQQTISLPANAVVEPRQLVVYAQPSKDPPSGLEIRLAWEIDITNGPIKKVYLDAISDEVIATS*
Ga0126376_1152440123300010359Tropical Forest SoilANATVEARQLVVYAQPPKDPPRGLEIRLAWEIDVKNGPISKVYLDAISDEIIATS*
Ga0126377_1160205723300010362Tropical Forest SoilVNAKQLVVYASPSKDPPSGLEIRLAWVIEITNGPISKVYLDALSDEIIATT*
Ga0134128_1307662713300010373Terrestrial SoilLIVYAQPAKDPAGGLTIRLAWEIDIAHGPVTKVYLDAISDEIIATS*
Ga0105239_1067300433300010375Corn RhizospherePTVSLPPNATVEARQLVIYASPSKDPPSGLQVRIAWEIDVVNGPITKVYLDAISEQIIATT*
Ga0105239_1134729823300010375Corn RhizosphereQQPLTLPATAAVNAKELVVYVRSSKDPPSGLTLRLAWEIDVTNGPIHKVYLDAISDEIIATT*
Ga0134126_1115274623300010396Terrestrial SoilIKTQPLTFVDANSQQQTLSLPANATVEARQLVVYAQPSKDPSSGLQIRLAWELEVTNGPVTRVYLDAISDEIIATS*
Ga0157291_1015991113300012902SoilQAADHVKTQQVGSLPGNAKVEARQLVVYVEPAKDPASGLEIRLAWEIDVTNGPISKVYLDALSDEIIATS*
Ga0126375_1166962713300012948Tropical Forest SoilTLSLPANATVEARQLVVYAQPSKDPSNGLQIRLAWELEVTNGPVTRVYLDAISDEIIATS
Ga0164298_1157884313300012955SoilKDTSSGLTIRLAWEIDVTNGPVTKVYLDAISDEIIATT*
Ga0164299_1149499313300012958SoilAEQAVDHIRTRQTPSVPANATVEARQLVVYAQPSKDPSSGLEIRLAWEIEITRGPVTRVYLDAISDEIIATS*
Ga0164308_1229627423300012985SoilLVIYAQPPTDPASGLALRLAWEIDITNGPFRQVYLDAISDEIIATT*
Ga0164304_1127822413300012986SoilAQPAKDPAGGLTIRLAWEIDITHGPVTKVYLDAISDEIIATT*
Ga0157371_1133553013300013102Corn RhizosphereTGQQQSVSLPANAVVLARQLVVYAQPSKVPPSGLEIRLAWELDVTNGPISKVYLDAISDEIIATS*
Ga0163162_1175055713300013306Switchgrass RhizosphereQPSKEPSNGLEVRLAWEIEITSGPVTRVYLDAISDEIIATS*
Ga0163162_1216318913300013306Switchgrass RhizosphereGPQQTVSLPANATVEAKQLVVYVQPSKDPASGLAIRLAWEIDVTKGPISKVYLDAISDEIIATS*
Ga0163162_1240814723300013306Switchgrass RhizosphereSKDPSNGLQIRLAWEIEVTNGPIKWVYLDAISDEIIATS*
Ga0157375_1143779913300013308Miscanthus RhizosphereQPFTTVNATGQPQTVSLPANAAVQARQLVVYAQPSKDPPSGLEFRLAWEIDVQNGPINKVYLDAVSGEIIATF*
Ga0157375_1324511623300013308Miscanthus RhizosphereCNRSATDRIPTRERLVEARQLVIYAQPSKVPPSGLEIRLAWELDVTNGPISKVYLDAISDEIIATS*
Ga0120183_100133323300013754TerrestrialAKATVAARELVVYAQPSKDPPSGLEIRLAWEIDITNAPIKKVYLDAISEQIIATS*
Ga0120188_101011723300013760TerrestrialDASQQSVTLPANATIEARELVVYAQPSKDPPSGLEIRLAWEIDITNAPIKKVYLDAISEQIIATS*
Ga0075342_121774513300014320Natural And Restored WetlandsKDPANGLQIRLAWEIDITNGPISKVYLDALSDEIIATT*
Ga0163163_1053680513300014325Switchgrass RhizosphereNVRLPANATVEAKQLVVYAQPAKDPAGGLTIRLAWEIDITHGPVTKVYLDAISDEIIATS
Ga0163163_1076614733300014325Switchgrass RhizosphereSTDPANGLQIRLAWELEVTNAPVSRVYLDAISDEIIATS*
Ga0157380_1110030513300014326Switchgrass RhizosphereEAKQLVVYAQPAKDPAGGLTIWLAWEIDITHGPVTKVYLDAISDEIIATS*
Ga0182000_1020959523300014487SoilVTLPANATVEARELVVFVQPSKDPPSGLEIRLAWEINITNAPIKKVYLDAMSEQIIATS*
Ga0157377_1131377223300014745Miscanthus RhizosphereVYAQPSKDLSSGLEIRLAWEIEVTGGPVTRVYLDAISDEIIATS*
Ga0157376_1215766213300014969Miscanthus RhizospherePKVTSQQAVDHIRAQQTLSLPANATDAARQLVVYAQPAKNGPNGLQIRLAWEVEVTGGPVTRVYLDAISEEIIATS*
Ga0182007_1040743923300015262RhizosphereTQQTPSLPANATVEARQLVVYTQPSKEPSNGLEVRLAWEIEITGGPVTRVYLDAISDEIIATS*
Ga0182005_117280613300015265RhizospherePSKNQAGGLEIRLAWELEVTGGPVTRVYLDAISDEIIATS*
Ga0132258_1337575823300015371Arabidopsis RhizosphereAEQAADHVKTQQPANAKAEVRQLVVYAQPSKDPSNGLEIRLAWEIDVTDGPVSKVYLDALSDEIIATT*
Ga0132257_10066156533300015373Arabidopsis RhizospherePFTVANANGQQQNLSLPASAAAEAQQLVIYAQPSKDPPSGLEFRLAWEIDVTNGPIKKVYLDAVSGEIIATS*
Ga0132257_10397843723300015373Arabidopsis RhizosphereYAQPSKEPSNGLEVRLAWEIEITSGPVTRVYLDAISDEIIATS*
Ga0132255_10255226723300015374Arabidopsis RhizosphereVEARQLVVYVEPAKDPASGLEIRLAWEIEVTNGPVSKVYLDALSDEIIATT*
Ga0132255_10403217223300015374Arabidopsis RhizosphereFLDANAQTQTFSLPPNATADASQLVVYARPAKDPPSGLEIRLAWEVEITNGPIKRVYLDAISNDIIATS*
Ga0132255_10580346623300015374Arabidopsis RhizosphereANATVAARQLVVYARPSKDPPSGLTIRLAWEVDVTNGPVSKVYLDAISDEIIATT*
Ga0163161_1074523813300017792Switchgrass RhizosphereKTQQAVSLPGSAKAEARQLVVYAQPSKDPPNGLEIRLAWEIEVTNAPISKVYLDALSDEIIATT
Ga0190275_1135630013300018432SoilPATAGVEARQLVVYAQPSSDPASGLQLRLAWEIDITNGPIKQVYLDAISDEIIGATPS
Ga0190268_1072283223300018466SoilARELVVFVEPAKDPPSSLEMRLAWEIDITNASIKKVYLDAISEQIIATS
Ga0187893_1063313723300019487Microbial Mat On RocksPASTTVDARQLVVYAQPSKDPPSGLQIRLAWEIEVTNGPIKWVYLDAISDEIIAIS
Ga0207682_1046818023300025893Miscanthus RhizosphereAQPSKDATSGLEIRLAWEIDVTNAPISKVYLDALSDEIIATT
Ga0207647_1018267733300025904Corn RhizosphereQLVVYVEPAKDPASGLEIRLAWEIEVTNGPVSKVYLDALSDEIIATT
Ga0207647_1024313823300025904Corn RhizosphereATAEARELVVYASPSPSGLQVRIAWEIDVSNGPVTKVYLDAISEEIIATS
Ga0207643_1016684833300025908Miscanthus RhizosphereVVEAKQLVVYAQPSKDPSSGLEIRLAWEIDVTNGPISKVYLDAISDEIIATS
Ga0207654_1100839623300025911Corn RhizosphereSLPANATVEARQLVVYALPSKDPSSGLQIRLAWELEVTGGPVTRVYLDAISDEIIATS
Ga0207695_1110106313300025913Corn RhizosphereNHVKTQQTPSLPANVAVVARQLVVYAQPSKEPSNGLEIRLAWEIEITGGPVTRVYLDAISDEIIATS
Ga0207660_1094699513300025917Corn RhizosphereVDRVKNQPTVSLPASATVEARQLVVYAQPSKDPSNGLQIRLAWEIEVTNGPIKWVYLDAISDEIIATS
Ga0207662_1008801643300025918Switchgrass RhizosphereAATAEARELVVYASPSPSGLQVRIAWEIDVSNGPVTKVYLDAISEEIIATS
Ga0207649_1057431323300025920Corn RhizosphereTGQQQTVSLPANAVVEARQLVIYAQPSKVPPSGLEIRLAWELDVTNGPISKVYLDAISDEIIATS
Ga0207646_1130152123300025922Corn, Switchgrass And Miscanthus RhizosphereSGSQRQTISLPANSTVAARQLVVYAQPSKNPPSGLEIRLAWEIDVTNAPISKVYLDAISGEIIATS
Ga0207694_1005843853300025924Corn RhizosphereNLSLPTNAVVEARQLVVYAQPSKVPPSGLEIRLAWEVDVTNAPVSKVYLDAISDEIIATS
Ga0207694_1007113353300025924Corn RhizosphereVKTQQPASAKVEARQLVVYVEPAKDPANGLEIRLAWEIEVTNFPINKVYLDALSDEIIAT
Ga0207650_1012787713300025925Switchgrass RhizosphereQLVVYAQPSKEPRSGLEIRLAWEIDVTNGPLSKVYLDALSDEIIATS
Ga0207650_1081572023300025925Switchgrass RhizospherePPNAAVEARELVVYARPAKDPPAGLELRLAWEIDVNNGPIKKLYLDAVSEEIIATS
Ga0207644_1035112013300025931Switchgrass RhizosphereQLVVYAQPAKDPPSGLTIRLAWEIDVTGGPIHKVYLDAISDEIIATT
Ga0207690_1038606933300025932Corn RhizosphereKDPPSGLILRLAWEIDVTNSPIHKVYLDAISNEIIATT
Ga0207709_1127504823300025935Miscanthus RhizosphereQQTPSLPANVAVVARQLVVYAQPSKEPSNGLEIRLAWEIEIKGGPVTRVYLDAISDEIIATS
Ga0207670_1096424923300025936Switchgrass RhizosphereQSITTGQQQTISLPANAVVEARQLVIYAQPSKVPPSGLEIRLAWELDVTNGPISKIYLDAISDEIIATS
Ga0207679_1094089623300025945Corn RhizosphereFTNATGQQQTISLPANAVVEARQLVVYAQPSKVPPSGLEIRLAWELDITNGPISKVYLDAISDEIIATS
Ga0207679_1176056423300025945Corn RhizosphereYVQPAKDTATGLQIRLAWEVEITGGPVKQIYLDAISGEIIATS
Ga0207651_1007557013300025960Switchgrass RhizosphereVNATGQPQTVSLPANAAVQARQLVVYAQPSKDPPSGLEFRLAWEIDVQNGPINKVYLDAVSGEIIATS
Ga0207712_1046354633300025961Switchgrass RhizosphereLVVYAQPSKVPPSGLEIRLAWELDVTNGPVSKVYLDAISDEIIATS
Ga0207639_1216452313300026041Corn RhizosphereTGQQQSPTLPANAVVEARQLVVYAQPSKVPPSGLEIRLAWELDVTNGPISKVYLDAISDEIIATS
Ga0207641_1044074143300026088Switchgrass RhizosphereAEQAVNHIKTQQTPSLPANATVVARQLVVYAQPSKQPSSGLEIRLAWEIEITGGPVTRVYLDAISEEIIATS
Ga0207641_1217984523300026088Switchgrass RhizospherePSKVPPSGLEIRLAWELDVTNGPISKVYLDAISDEIIATS
Ga0207674_1040319533300026116Corn RhizosphereTAKVEAKQLVVYAQPSKDPASGLQIRLAWEIDVTNGPITKVYLDAISDEIIATT
Ga0207674_1052963913300026116Corn RhizosphereQPSKDPSSGLEIRLAWEIEISGGPVTRVYLDAISDEIIATS
Ga0207675_10056803313300026118Switchgrass RhizosphereVVVARQLVVYAQPSKVPPSGLEIRLAWELDVTNGPVSKVYLDAISDEIIATS
Ga0209074_1011159113300027787Agricultural SoilPASGLQIRLAWEIDVTNGPITKVYLDAISDEIIATS
Ga0207428_1099582113300027907Populus RhizosphereVSLPPNATVEARQLVVYASPSTNGLQVRIAWEIDVANGPITKVYLDAISEEIIATS
Ga0268265_1258962513300028380Switchgrass RhizosphereLVVYVQPSKDPPSGLTFRLAWEIDVTNGPISKVYLDALSDEIIATT
Ga0268259_1007229113300030499AgaveSSGLEIRLAWEIDVTNGPFSKVFLDAISDEIIATS
Ga0310813_1158576423300031716SoilKNGPNGLQIRLAWEVEVTGGPVTRVYLDAISEEIIATS
Ga0310900_1056360323300031908SoilPGSAKAEARQLVVYAQPSKDPPNGLEIRLAWEIEVTNAPISKVYLDALSDEIIATT
Ga0310884_1042405313300031944SoilQALTFVDANAQTQTLSLSANATADASQLVVYARPAKDLSGGLEIRLAWEVEITNGPIKRVYLDAISNDIIATS
Ga0307409_10154698623300031995RhizospherePPSGLQIRLAWEIEVTNGPIKWVYLDAISDEIIAIS
Ga0307416_10050346833300032002RhizosphereIYASPSKDAPSGLQVRIAWEIDVVNGPITKVYLDAISEEIIATT
Ga0307416_10090664723300032002RhizosphereQLVVYAQPSKDPPSGLQIRLAWEIEVTNGPIKWVYLDAISDEIIAIS
Ga0310902_1006742743300032012SoilAQASKDPANGLEIRLAWEIDVTNASTSKVYLDALSDEIIATT
Ga0315910_1062282413300032144SoilRQLVVYAQPSKVPPSGLEIRLAWEIDVTNGPITKVYLDALSDEIIATT
Ga0310810_1074234113300033412SoilSAKAEARQLVVYAQPSKDPPNGLEIRLAWEIEVTNAPISKVYLDALSDEIIATT
Ga0310810_1122399823300033412SoilPSASGLALRLAWEVDVTNGPIRQVYLDAISDEIIATS


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.