Metagenome / Metatranscriptome Family F032024

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F032024
Family Type	Metagenome / Metatranscriptome
Number of Sequences	181
Average Sequence Length	43 residues
Representative Sequence	MLTSTKSGVPEKDRNASVSAAEVMGRVVPHDQTWARSEPTTK
Number of Associated Samples	110
Number of Associated Scaffolds	181

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	98.34 %
% of genes near scaffold ends (potentially truncated)	98.34 %
% of genes from short scaffolds (< 2000 bps)	90.06 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.19

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (55.801 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (39.779 % of family members)
Environment Ontology (ENVO)	Unclassified (67.403 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.066 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 14.29% β-sheet: 0.00% Coil/Unstructured: 85.71%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.19
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.19
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 181 Family Scaffolds
PF04519	Bactofilin	24.31
PF01527	HTH_Tnp_1	1.66
PF13408	Zn_ribbon_recom	1.10
PF01408	GFO_IDH_MocA	1.10
PF12161	HsdM_N	0.55
PF02653	BPD_transp_2	0.55
PF13365	Trypsin_2	0.55
PF04828	GFA	0.55
PF03551	PadR	0.55
PF01292	Ni_hydr_CYTB	0.55
PF02371	Transposase_20	0.55
PF04392	ABC_sub_bind	0.55
PF12697	Abhydrolase_6	0.55
PF12974	Phosphonate-bd	0.55
PF00589	Phage_integrase	0.55
PF00072	Response_reg	0.55
PF00550	PP-binding	0.55

COG ID	Name	Functional Category	% Frequency in 181 Family Scaffolds
COG1664	Cytoskeletal protein CcmA, bactofilin family	Cytoskeleton [Z]	24.31
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.55
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.55
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.55
COG1969	Ni,Fe-hydrogenase I cytochrome b subunit	Energy production and conversion [C]	0.55
COG2864	Cytochrome b subunit of formate dehydrogenase	Energy production and conversion [C]	0.55
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.55
COG3038	Cytochrome b561	Energy production and conversion [C]	0.55
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.55
COG3658	Cytochrome b subunit of Ni2+-dependent hydrogenase	Energy production and conversion [C]	0.55
COG3791	Uncharacterized conserved protein	Function unknown [S]	0.55
COG4117	Thiosulfate reductase cytochrome b subunit	Inorganic ion transport and metabolism [P]	0.55

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	55.80 %
Unclassified	root	N/A	44.20 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	55.80 %
Unclassified	root	N/A	44.20 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	55.80 %
Unclassified	root	N/A	44.20 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	45.30 %
Unclassified	root	N/A	44.20 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	1.10 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.20 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	43.65 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1.10 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.20 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	30.94 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.63 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1.10 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.10 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.20 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	30.94 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	2.76 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.66 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	1.10 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1.10 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.20 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	30.94 %
Rhizobiales bacterium GAS191	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS191	2.76 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.66 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.10 %
Gluconacetobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Gluconacetobacter	1.10 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.20 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	30.94 %
Rhizobiales bacterium GAS191	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS191	2.76 %
Gluconacetobacter diazotrophicus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Gluconacetobacter → Gluconacetobacter diazotrophicus	1.10 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.10 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.55 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.20 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	30.94 %
Rhizobiales bacterium GAS191	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS191	2.76 %
Gluconacetobacter diazotrophicus PA1 5	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Gluconacetobacter → Gluconacetobacter diazotrophicus → Gluconacetobacter diazotrophicus PA1 5	1.10 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.10 %
Bradyrhizobium sp. 200	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 200	0.55 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.55 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000793\|AF_2010_repII_A001DRAFT_10133760	Not Available	516	Open in IMG/M
3300000955\|JGI1027J12803_100560585	Not Available	604	Open in IMG/M
3300005167\|Ga0066672_10628664	Not Available	695	Open in IMG/M
3300005172\|Ga0066683_10459204	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	780	Open in IMG/M
3300005332\|Ga0066388_100891215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1469	Open in IMG/M
3300005332\|Ga0066388_104070953	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	745	Open in IMG/M
3300005332\|Ga0066388_105947878	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300005436\|Ga0070713_100565736	Not Available	1077	Open in IMG/M
3300005467\|Ga0070706_100270635	All Organisms → cellular organisms → Bacteria	1585	Open in IMG/M
3300005467\|Ga0070706_100611524	Not Available	1012	Open in IMG/M
3300005467\|Ga0070706_101308652	Not Available	664	Open in IMG/M
3300005536\|Ga0070697_101020626	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300005555\|Ga0066692_10872558	Not Available	552	Open in IMG/M
3300005713\|Ga0066905_101219386	All Organisms → cellular organisms → Bacteria → Proteobacteria	673	Open in IMG/M
3300005713\|Ga0066905_101522871	Not Available	610	Open in IMG/M
3300005764\|Ga0066903_104942381	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	708	Open in IMG/M
3300005764\|Ga0066903_105580920	Not Available	662	Open in IMG/M
3300005764\|Ga0066903_106305064	Not Available	619	Open in IMG/M
3300005764\|Ga0066903_106320799	Not Available	618	Open in IMG/M
3300005764\|Ga0066903_106360268	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300005764\|Ga0066903_106379410	Not Available	615	Open in IMG/M
3300005764\|Ga0066903_108633914	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	518	Open in IMG/M
3300006028\|Ga0070717_10127442	All Organisms → cellular organisms → Bacteria → Proteobacteria	2186	Open in IMG/M
3300006172\|Ga0075018_10070282	All Organisms → cellular organisms → Bacteria	1500	Open in IMG/M
3300006175\|Ga0070712_101815738	Not Available	534	Open in IMG/M
3300006177\|Ga0075362_10031583	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2293	Open in IMG/M
3300006871\|Ga0075434_101924254	Not Available	597	Open in IMG/M
3300006953\|Ga0074063_10122320	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	764	Open in IMG/M
3300009012\|Ga0066710_102868233	Not Available	678	Open in IMG/M
3300010046\|Ga0126384_11225445	Not Available	693	Open in IMG/M
3300010047\|Ga0126382_11073655	Not Available	711	Open in IMG/M
3300010360\|Ga0126372_12809201	Not Available	539	Open in IMG/M
3300010366\|Ga0126379_11838052	Not Available	709	Open in IMG/M
3300010366\|Ga0126379_11863079	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	705	Open in IMG/M
3300010366\|Ga0126379_12854323	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	578	Open in IMG/M
3300012350\|Ga0137372_11188031	Not Available	516	Open in IMG/M
3300012355\|Ga0137369_11011037	Not Available	550	Open in IMG/M
3300012360\|Ga0137375_10347253	Not Available	1319	Open in IMG/M
3300012360\|Ga0137375_10742546	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	796	Open in IMG/M
3300012923\|Ga0137359_11286708	Not Available	619	Open in IMG/M
3300012960\|Ga0164301_10941607	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	674	Open in IMG/M
3300016270\|Ga0182036_11937317	Not Available	500	Open in IMG/M
3300016294\|Ga0182041_10162168	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1739	Open in IMG/M
3300016294\|Ga0182041_10288917	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1353	Open in IMG/M
3300016319\|Ga0182033_10285703	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1355	Open in IMG/M
3300016357\|Ga0182032_11440371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	597	Open in IMG/M
3300016357\|Ga0182032_11818476	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	532	Open in IMG/M
3300016371\|Ga0182034_10751894	All Organisms → cellular organisms → Bacteria	832	Open in IMG/M
3300016371\|Ga0182034_11166378	Not Available	669	Open in IMG/M
3300016371\|Ga0182034_11576040	Not Available	576	Open in IMG/M
3300016371\|Ga0182034_11634089	Not Available	566	Open in IMG/M
3300016387\|Ga0182040_11431357	Not Available	586	Open in IMG/M
3300016404\|Ga0182037_10342196	Not Available	1216	Open in IMG/M
3300016404\|Ga0182037_10618616	Not Available	920	Open in IMG/M
3300016404\|Ga0182037_11083799	Not Available	700	Open in IMG/M
3300016404\|Ga0182037_12117635	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	506	Open in IMG/M
3300016422\|Ga0182039_10509281	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1040	Open in IMG/M
3300016422\|Ga0182039_10664175	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	916	Open in IMG/M
3300016422\|Ga0182039_11177783	Not Available	692	Open in IMG/M
3300016445\|Ga0182038_10637374	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	923	Open in IMG/M
3300016445\|Ga0182038_11467177	Not Available	612	Open in IMG/M
3300018071\|Ga0184618_10190822	Not Available	853	Open in IMG/M
3300018082\|Ga0184639_10125375	All Organisms → cellular organisms → Bacteria	1362	Open in IMG/M
3300019867\|Ga0193704_1040204	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	932	Open in IMG/M
3300021432\|Ga0210384_10215123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1729	Open in IMG/M
3300021560\|Ga0126371_10736192	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1133	Open in IMG/M
3300021560\|Ga0126371_12888935	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300025898\|Ga0207692_10120328	Not Available	1469	Open in IMG/M
3300025910\|Ga0207684_11386418	Not Available	576	Open in IMG/M
3300025922\|Ga0207646_10633681	Not Available	958	Open in IMG/M
3300025934\|Ga0207686_10350124	Not Available	1112	Open in IMG/M
3300026547\|Ga0209156_10251801	Not Available	819	Open in IMG/M
3300027548\|Ga0209523_1087057	Not Available	645	Open in IMG/M
3300027874\|Ga0209465_10092926	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1476	Open in IMG/M
3300027907\|Ga0207428_11282908	Not Available	508	Open in IMG/M
3300028047\|Ga0209526_10067625	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2513	Open in IMG/M
3300028878\|Ga0307278_10023061	All Organisms → cellular organisms → Bacteria	2868	Open in IMG/M
3300029636\|Ga0222749_10239375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	920	Open in IMG/M
3300031446\|Ga0170820_13087846	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	568	Open in IMG/M
3300031543\|Ga0318516_10440915	Not Available	749	Open in IMG/M
3300031546\|Ga0318538_10204274	Not Available	1055	Open in IMG/M
3300031561\|Ga0318528_10500590	Not Available	652	Open in IMG/M
3300031572\|Ga0318515_10353740	Not Available	787	Open in IMG/M
3300031573\|Ga0310915_10301030	Not Available	1133	Open in IMG/M
3300031573\|Ga0310915_10547229	Not Available	821	Open in IMG/M
3300031668\|Ga0318542_10109319	Not Available	1343	Open in IMG/M
3300031668\|Ga0318542_10423394	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300031679\|Ga0318561_10046605	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS191	2155	Open in IMG/M
3300031719\|Ga0306917_10914062	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	686	Open in IMG/M
3300031723\|Ga0318493_10284095	Not Available	890	Open in IMG/M
3300031736\|Ga0318501_10047789	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS191	1985	Open in IMG/M
3300031744\|Ga0306918_10032182	All Organisms → cellular organisms → Bacteria	3328	Open in IMG/M
3300031744\|Ga0306918_10149091	Not Available	1725	Open in IMG/M
3300031744\|Ga0306918_10989672	Not Available	653	Open in IMG/M
3300031747\|Ga0318502_10141774	Not Available	1365	Open in IMG/M
3300031747\|Ga0318502_10971078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	517	Open in IMG/M
3300031768\|Ga0318509_10046631	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2192	Open in IMG/M
3300031768\|Ga0318509_10304643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	891	Open in IMG/M
3300031768\|Ga0318509_10425447	Not Available	742	Open in IMG/M
3300031770\|Ga0318521_10811052	Not Available	570	Open in IMG/M
3300031770\|Ga0318521_10825695	Not Available	565	Open in IMG/M
3300031771\|Ga0318546_10015035	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4262	Open in IMG/M
3300031771\|Ga0318546_10291475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1128	Open in IMG/M
3300031777\|Ga0318543_10352228	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	659	Open in IMG/M
3300031778\|Ga0318498_10251625	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	796	Open in IMG/M
3300031780\|Ga0318508_1001742	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3939	Open in IMG/M
3300031792\|Ga0318529_10109335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1253	Open in IMG/M
3300031793\|Ga0318548_10435580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	642	Open in IMG/M
3300031794\|Ga0318503_10024787	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS191	1720	Open in IMG/M
3300031794\|Ga0318503_10239537	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	588	Open in IMG/M
3300031796\|Ga0318576_10313793	Not Available	741	Open in IMG/M
3300031797\|Ga0318550_10535016	Not Available	564	Open in IMG/M
3300031798\|Ga0318523_10539980	Not Available	576	Open in IMG/M
3300031805\|Ga0318497_10156969	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1247	Open in IMG/M
3300031819\|Ga0318568_10063046	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2162	Open in IMG/M
3300031819\|Ga0318568_10142704	Not Available	1460	Open in IMG/M
3300031821\|Ga0318567_10458284	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	723	Open in IMG/M
3300031833\|Ga0310917_10044148	All Organisms → cellular organisms → Bacteria	2707	Open in IMG/M
3300031833\|Ga0310917_10360857	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	986	Open in IMG/M
3300031833\|Ga0310917_10644439	Not Available	718	Open in IMG/M
3300031833\|Ga0310917_10982412	Not Available	566	Open in IMG/M
3300031833\|Ga0310917_11010336	Not Available	557	Open in IMG/M
3300031835\|Ga0318517_10008840	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS191	3524	Open in IMG/M
3300031845\|Ga0318511_10567631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	528	Open in IMG/M
3300031846\|Ga0318512_10053687	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1805	Open in IMG/M
3300031879\|Ga0306919_11406588	Not Available	526	Open in IMG/M
3300031890\|Ga0306925_10108184	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Gluconacetobacter → Gluconacetobacter diazotrophicus → Gluconacetobacter diazotrophicus PA1 5	2964	Open in IMG/M
3300031890\|Ga0306925_10260776	All Organisms → cellular organisms → Bacteria	1867	Open in IMG/M
3300031896\|Ga0318551_10782415	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300031897\|Ga0318520_10033043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2602	Open in IMG/M
3300031897\|Ga0318520_10178146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1245	Open in IMG/M
3300031897\|Ga0318520_10690144	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300031910\|Ga0306923_10055283	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4393	Open in IMG/M
3300031910\|Ga0306923_10315372	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 200	1785	Open in IMG/M
3300031910\|Ga0306923_10702526	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1125	Open in IMG/M
3300031910\|Ga0306923_12326696	Not Available	533	Open in IMG/M
3300031910\|Ga0306923_12446037	Not Available	516	Open in IMG/M
3300031912\|Ga0306921_10223582	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2206	Open in IMG/M
3300031912\|Ga0306921_11169296	Not Available	858	Open in IMG/M
3300031912\|Ga0306921_12067363	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	604	Open in IMG/M
3300031912\|Ga0306921_12118211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	595	Open in IMG/M
3300031912\|Ga0306921_12272581	Not Available	569	Open in IMG/M
3300031942\|Ga0310916_10210955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1628	Open in IMG/M
3300031946\|Ga0310910_10007250	All Organisms → cellular organisms → Bacteria → Proteobacteria	6727	Open in IMG/M
3300031946\|Ga0310910_11508553	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	515	Open in IMG/M
3300031947\|Ga0310909_11324228	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	578	Open in IMG/M
3300031947\|Ga0310909_11479697	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	541	Open in IMG/M
3300031954\|Ga0306926_10664737	All Organisms → cellular organisms → Bacteria	1266	Open in IMG/M
3300031954\|Ga0306926_11575272	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	755	Open in IMG/M
3300031954\|Ga0306926_11596921	Not Available	748	Open in IMG/M
3300031959\|Ga0318530_10501751	Not Available	504	Open in IMG/M
3300031981\|Ga0318531_10236485	Not Available	824	Open in IMG/M
3300031981\|Ga0318531_10535900	Not Available	530	Open in IMG/M
3300032001\|Ga0306922_10383689	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1506	Open in IMG/M
3300032001\|Ga0306922_11323909	Not Available	727	Open in IMG/M
3300032001\|Ga0306922_11345234	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	720	Open in IMG/M
3300032001\|Ga0306922_11994667	Not Available	565	Open in IMG/M
3300032025\|Ga0318507_10146852	Not Available	1006	Open in IMG/M
3300032025\|Ga0318507_10248693	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	771	Open in IMG/M
3300032025\|Ga0318507_10325953	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	668	Open in IMG/M
3300032035\|Ga0310911_10919368	Not Available	504	Open in IMG/M
3300032039\|Ga0318559_10110408	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1225	Open in IMG/M
3300032043\|Ga0318556_10669614	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	540	Open in IMG/M
3300032055\|Ga0318575_10069006	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS191	1664	Open in IMG/M
3300032060\|Ga0318505_10396909	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	652	Open in IMG/M
3300032060\|Ga0318505_10526134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	557	Open in IMG/M
3300032063\|Ga0318504_10200005	Not Available	932	Open in IMG/M
3300032063\|Ga0318504_10471763	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	600	Open in IMG/M
3300032066\|Ga0318514_10093529	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1516	Open in IMG/M
3300032068\|Ga0318553_10200433	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1040	Open in IMG/M
3300032076\|Ga0306924_10611638	Not Available	1232	Open in IMG/M
3300032076\|Ga0306924_11879462	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	621	Open in IMG/M
3300032090\|Ga0318518_10184135	Not Available	1067	Open in IMG/M
3300032094\|Ga0318540_10325928	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	741	Open in IMG/M
3300032094\|Ga0318540_10353154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	710	Open in IMG/M
3300032261\|Ga0306920_100204179	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Gluconacetobacter → Gluconacetobacter diazotrophicus → Gluconacetobacter diazotrophicus PA1 5	2949	Open in IMG/M
3300032261\|Ga0306920_101350461	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1023	Open in IMG/M
3300032261\|Ga0306920_101795933	Not Available	865	Open in IMG/M
3300032261\|Ga0306920_101853078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	849	Open in IMG/M
3300032261\|Ga0306920_102295911	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	747	Open in IMG/M
3300032261\|Ga0306920_102841947	Not Available	658	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.79%
Host-Associated	Host-Associated	2.21%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.13%
Plants	Host-Associated → Plants	2.21%
Aquatic	Environmental → Aquatic	1.66%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.13%
Sediment	Environmental → Aquatic → Sediment	1.66%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.66%
Roots	Host-Associated → Plants → Roots	0.55%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	82.32%
Loam	Environmental → Terrestrial → Soil → Loam	13.81%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.66%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.66%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.55%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	69.61%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	9.39%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.29%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.52%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.31%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.66%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.66%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.55%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	39.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	28.73%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	7.18%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.52%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.42%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.66%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.10%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.10%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.10%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.10%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.55%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.55%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.55%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.55%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006177	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300019867	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300027548	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A001DRAFT_101337601	3300000793	Forest Soil	MLTSTKNGAPEKDRSASVGAADVIGRVVQHDQTWAKSEPTKAGMAS
JGI1027J12803_1005605851	3300000955	Soil	MLTTKNGAPEKDRNASVGAAEVIGRVVQHDQWARS
Ga0066672_106286641	3300005167	Soil	MLNSMKSSATEKDRNAAANAPEIMGRMVQPHDQAWARSEPTTKAGTASC
Ga0066683_104592042	3300005172	Soil	MLSSIKSSAPEKDRTAAANAAEVLAGTVQPHDQAWARSEPTTK
Ga0066388_1008912153	3300005332	Tropical Forest Soil	MLNSMKSGAPETSKNAAASVAEVIGRTVQPHDHAWAGSEPT
Ga0066388_1040709531	3300005332	Tropical Forest Soil	MLTSTKSGVPEKDKNTSVSAAEVMGRVMHHDQTWARSEPTTKAGMASCIGS
Ga0066388_1059478781	3300005332	Tropical Forest Soil	MLISTKSGAPEKDRNASVSAAESRVVPHDQTWARSEPTTKA
Ga0070713_1005657362	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MLTSTRSGVPEKDKNASVSAAEVMGRVAPHDQTWARSEPTTK
Ga0070706_1002706351	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MLISTKSGALPEKDRNASVSAAEVMGRVVPHDQTWARSEPTTKAGTASC
Ga0070706_1006115242	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MLTSTKSGVPEKDRNASVSAAEVMGRVVPHDQTWARSEPTTKAGTASC
Ga0070706_1013086521	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MLISTKSGAPEKDRNASVSAAEVMGRVVPHDQAWAGSEPTTRAG
Ga0070697_1010206262	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MLTSTKSGVPEKDRNASVSAAEVMGRVVPHDQTWARSEPTTK
Ga0066692_108725582	3300005555	Soil	MLTSTKNGAPEKDRNASVNAADVIGRVVQHDQTWAKSEPTTK
Ga0066905_1012193861	3300005713	Tropical Forest Soil	MLISTKSGAPEKDRNGPVSAAEVMGRVVPHDQTWARSEPTTKAGTASC
Ga0066905_1015228711	3300005713	Tropical Forest Soil	MLTSPKNGAPEKDRTASVGATEVMGRVVQHDQWARSEPTTKAGMASCIGS
Ga0066903_1049423812	3300005764	Tropical Forest Soil	MLNSMKSSAPEKDKNAAANAAEVVGRTVQPHDQAWARSEPTTK
Ga0066903_1055809203	3300005764	Tropical Forest Soil	MLTNTKSGVPEKDRNASVSAAEVIGRVVQHDQTWAKSEPTTKA
Ga0066903_1063050641	3300005764	Tropical Forest Soil	MLNSMKNSATEKDKNAAANAVEIMERTVQPHDQAWARSDPTTKAGT
Ga0066903_1063207992	3300005764	Tropical Forest Soil	MLTSTKSGVPEKDRNASVGAAEVIGRVVQHDQTWAKSEPTTKAGMASCI
Ga0066903_1063602681	3300005764	Tropical Forest Soil	MWSTKSGAPEKERNASVGAAEVMGRAVPHDQSWARSEPTTK
Ga0066903_1063794101	3300005764	Tropical Forest Soil	MLNSMKSGAPEKDKSAAANAPEVMGRMVQPHDQTWARSE
Ga0066903_1086339142	3300005764	Tropical Forest Soil	MLNSTKSGVPEKDKNAAANAAEVMGRTVQPHDQAWARSEPT
Ga0070717_101274421	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MLTSTKSGVPEKDRNASVSAAEVMGRVVPHDQTWARSEPTTKAGT
Ga0075018_100702821	3300006172	Watersheds	MLTSMRSGVPEKDKNSSVSAAEVMGRVAPHDQAWARSEPTTKAGTASC
Ga0070712_1018157381	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MLTSTKSGVPETDRNASVSAAEVIGRVVQHDQTWARSEPTTKA
Ga0075362_100315831	3300006177	Populus Endosphere	MLTSTKNGAPEKDRNASVGAAEVIGRVVQHDQWARSEPTTKAGMASCIGSD
Ga0075434_1019242541	3300006871	Populus Rhizosphere	MLTGTKNGAPEKDRAASVGAAEVISRVVQHDQWARSESTTKGGMSSCI
Ga0074063_101223203	3300006953	Soil	MLISTKSGVPEKDRNASVSAAEVVGRVVQHDQTWARSEPTTK
Ga0066710_1028682331	3300009012	Grasslands Soil	MLTSTKSGVPETDRNASVSAAEVIGRVVQHDQTWAKSEPTTKAGMAS
Ga0126384_112254451	3300010046	Tropical Forest Soil	MLTSTKSGAPEKDRNASVSAAEVMGRVVPHDQAWAGSEPTTR
Ga0126382_110736551	3300010047	Tropical Forest Soil	MDIFICTKRAAPEKDRNASVGAAEVMGRVVPHDQTW
Ga0126372_128092011	3300010360	Tropical Forest Soil	MLISTKSGVPEKDKNAAANAAEVMGRTVQPHDQAWAKSEPTTQA
Ga0126379_118380522	3300010366	Tropical Forest Soil	MLISTKSGAPEKDRNASLGAAEIMGRVVPHDQWARSE
Ga0126379_118630792	3300010366	Tropical Forest Soil	MLNSMKNDVTEKDKNVAEDAAEVMRGTVQPHDQGLTRSE
Ga0126379_128543231	3300010366	Tropical Forest Soil	MLNSTKSGVPEKDKNAAANAAEVMGRTVQHDQTWARSEPTKAGTASCI
Ga0137372_111880312	3300012350	Vadose Zone Soil	MLNSTKSGGPEKDKNAAANAAEVIGTRVQPHDQACARSEPATKGG
Ga0137369_110110371	3300012355	Vadose Zone Soil	MLTSTKNGVPEKDRNASVSAAEVVIGRVVQHDQT*
Ga0137375_103472534	3300012360	Vadose Zone Soil	MKSGVPEKDKNATANAPEVLGRTVQPHDQAWARSEP
Ga0137375_107425462	3300012360	Vadose Zone Soil	MLNSMKSGVPEKDKNATANALEVLGRTVQPHDQAWARSEPTTKAGTASC
Ga0137359_112867081	3300012923	Vadose Zone Soil	LNSMKSSAPEKDRNAAANATEVMGRTVQPHDQAWARSE
Ga0164301_109416071	3300012960	Soil	MKEVEMLNSMKSSAPEKDKNAAANAAEIMERTVQPHDQAWARSDPTTKAGTSS
Ga0182036_119373171	3300016270	Soil	MLISTKSGAPEKDKNGPVSAAEVMGKVVPHDQTWARSEPTTKAGTASC
Ga0182041_101621681	3300016294	Soil	MLTSTKSGVPEKDRNASVSAAEVIGRVVQHDQTWAK
Ga0182041_102889173	3300016294	Soil	MLNSTKSGTPEKDRSVAANAPEVLGRTVQPHDQAWARS
Ga0182033_102857031	3300016319	Soil	MLTSTKSGVPETDRNASVSAAEVIGRVVQHDQTWAKSEPTTKAGMASCI
Ga0182032_114403712	3300016357	Soil	MLNSTKSGVPEKDKNATANAAEVMGRTVQPHDQTWARSE
Ga0182032_118184761	3300016357	Soil	MLNSMKSGVTEKDKNAAANAPEVMGRMVQPHDQAWAGSEPT
Ga0182034_107518941	3300016371	Soil	MLSTKSGAPEKERNASVGAAEVMGRAVPHDQSWARSEPTTKA
Ga0182034_111663781	3300016371	Soil	MLISTKSGAPEKDRNASVSAADVMGRVVPHDQTWARSEL
Ga0182034_115760401	3300016371	Soil	MLTSTKSGTPEKDRNASVSAAEVMGRVVQHDQTWAKSEP
Ga0182034_116340891	3300016371	Soil	MLNSMKNSATEKDRNAAANAPEIMGRMVQPHDQAWARSEPTTKAGTASC
Ga0182040_114313571	3300016387	Soil	MLNSMKSGASEKDRSVAANAPEVMGRTVQPHDQAWARSE
Ga0182037_103421962	3300016404	Soil	MLTSTKSGVPEKDKNTSVSAAEVMGRVMHHDQTWARSE
Ga0182037_106186161	3300016404	Soil	MLTSTKSGTPEKDRNASVSAAEVMGRVMQHDQTWAKSEPTTKAGM
Ga0182037_110837992	3300016404	Soil	MLNSMKTGASEKDKNAAANAAEVMGGTVQPHDQAWARSEPTTKAGTA
Ga0182037_121176351	3300016404	Soil	MFNSMKSGAPEKSKNAAASVAEVIGRTVQPHDHAWAGS
Ga0182039_105092811	3300016422	Soil	MLNSMKSGVPEKDKNATASAPEVLGRTVQPHDQAWARSEPTTKAGTA
Ga0182039_106641751	3300016422	Soil	MLTSTKSGVPEKDRNASVGAAEVMGRVAPHDQWPRSEPTTKAG
Ga0182039_111777831	3300016422	Soil	MLTSTKSGVPEKDRNASVSAADVIGRVVPHDQTWA
Ga0182038_106373741	3300016445	Soil	MLTSTKSGVPETDRNASVSAAEVIGRVVQHDQTWAKSEPTTKAGMASCIGSD
Ga0182038_114671771	3300016445	Soil	MLTSTKSGVPEKDRNASVSAAEVIGRVVQHDQTWAKSEPTTKAGMASCIGSD
Ga0184618_101908221	3300018071	Groundwater Sediment	VLTSTNNGVPEKDGNPSIGAAEVIGRVVRHDQWARSEPTTKA
Ga0184639_101253753	3300018082	Groundwater Sediment	MLTSTKNGAPERDRNPSVGAAEVIGRVVHHDQWTRSEPTTKAGMASCIGS
Ga0193704_10402042	3300019867	Soil	MLTSTKNGAPEKDRNASVGAAEVIGRVVHHDQWARSEPATKAGMASC
Ga0210384_102151233	3300021432	Soil	MLTSTRSGVPEKDKNASVSAAEVMGRVAPHDQTWA
Ga0126371_107361922	3300021560	Tropical Forest Soil	MLTSTKSGVPEKDKNASVSAAEVMGRVAPHDQTWARS
Ga0126371_128889352	3300021560	Tropical Forest Soil	MWSTKSGAPEKERNASVGAAEVMGRAVPHDQSWARS
Ga0207692_101203281	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MLISTKSGAPEKDRNASLSAAEVMGRVVPHGQWARSEPTTKAGM
Ga0207684_113864182	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MLISTKSGAPEKDRNVAANAPEIMERMVQPHDQAWARSEPTTKAG
Ga0207646_106336811	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MLNSMKSGVPEKDKYAAANAPEVLGRTVQPHDQAWARSEPMTKAG
Ga0207686_103501241	3300025934	Miscanthus Rhizosphere	MLISTKSGAPEKDRNASLSAAEVMGRVVPHDQWARSEPTTKAGMASC
Ga0209156_102518012	3300026547	Soil	MLINTKSGAPEKDRNASLSAAEVMGRVVPHDQWARSEPT
Ga0209523_10870571	3300027548	Forest Soil	MLTSTKSGVPETDRNASVSAAEVMGRVVPHDQTWARSEP
Ga0209465_100929261	3300027874	Tropical Forest Soil	MLTSTKSGVPEKDRNASVSAAEVIGRVVQHDQSWARSEPTTTTG
Ga0207428_112829081	3300027907	Populus Rhizosphere	MLTSTKSGAPDKDRNASVSAAEVMGRVVQHDQTWARSEPMTKTGT
Ga0209526_100676255	3300028047	Forest Soil	MLNSMKSGAPEKNKNAAASVAEVIGKTVQPHDQAWAG
Ga0307278_100230611	3300028878	Soil	MLTSTKNGAPEKDRNASVGAAEVIGRVVHHDQWARSEPATKAGMASCIGSE
Ga0222749_102393751	3300029636	Soil	MLNSMKSGAPEKNKNAAASVAEVIGKTVQPHDQAWAGSEPTTKA
Ga0170820_130878462	3300031446	Forest Soil	EMLNSTKSGVPEKDKNVVADTAEVTGRSMPPHDQV
Ga0318516_104409151	3300031543	Soil	MLISTKSGAPEKDRNASLSAAEVMGRVVPHEQTWARSEPSTKAGTASC
Ga0318538_102042743	3300031546	Soil	MLTSMRSGVPEKDKNASVSAAEVMGRVAPHDQAWARSEPTTK
Ga0318528_105005901	3300031561	Soil	MLTSTKNGAPEKDGNASVGAAEVMGRVVQHDQWPRSEPTTKAGMASC
Ga0318515_103537402	3300031572	Soil	MLTSTKSGVPEKDRNASVGAAEVMGRVVQHDQTWAKSEPTTKAGMASCIG
Ga0310915_103010301	3300031573	Soil	MLTSTKSGVPEKDKNTSVSAAEVMGRVMHHDQTWARSESTTKAGMASCIGS
Ga0310915_105472291	3300031573	Soil	MLTSTKSSVPEKDRNASVSAADVIGRVVPHDQTWAKSEPTTKAEMASCIG
Ga0318542_101093191	3300031668	Soil	MLNSMKSGAPEKDKSVAANAPDVMGRMVQPHDQAWARSEP
Ga0318542_104233942	3300031668	Soil	MLSTKSGAPEKERNASVGAAEVMGRAVPHDQSWARSEP
Ga0318561_100466051	3300031679	Soil	MLTSTKSGAPEKDRNASVGAAEVMGRVVQHDQTWAKLGPTTRAGMASCIGSDM
Ga0306917_109140622	3300031719	Soil	MLNSMKSSAPEKDKNAAANAAEIMGRTVQPHDQAGSDPTTKAG
Ga0318493_102840951	3300031723	Soil	MLTSTKSGVPEKDRNASVSAAEVIGRVQHDQTWAKSEPTTNAGMASCIGS
Ga0318501_100477891	3300031736	Soil	MLTSTKSGAPEKDRNASVGAAEVMGRVVQHDQTWAKLGPTTRAGMASC
Ga0306918_100321828	3300031744	Soil	MLISTKSGAPEKDRNASVGAAEVMGRVVPHDQTWARSEPTTKAGTASCIGSD
Ga0306918_101490912	3300031744	Soil	MLTSTKSGVPEKDKNTSVSAAEVMGRVMHHDQTWARSES
Ga0306918_109896722	3300031744	Soil	MLTSTKSGVPEKDRNASVSAAEVIGRIVQHDQTWAKSEPTTKAGM
Ga0318502_101417741	3300031747	Soil	MLTSTKSGAPEKDRNASVGAAEVMGRVVQHDQTWAKLGPTTRAGMASCIG
Ga0318502_109710782	3300031747	Soil	MLNSMKSSATEKDRNAAATAPEVLGRTVQPHDQAWARSEPTTKA
Ga0318509_100466311	3300031768	Soil	MLISTKSGAPEKDRNASLSAAEVMGRVVPHEQTWARSEPSTKAGTASCIGSD
Ga0318509_103046432	3300031768	Soil	MLKSGVPEKDKNATATAPEVLGRTMQSHDQAWARSEPTT
Ga0318509_104254471	3300031768	Soil	MLTSTKSGVPEKDRNASVGAAEVMGRVVQHDQTWAKSEP
Ga0318521_108110521	3300031770	Soil	MLTSTKNGAPEKDRNASVGAAEVMGRVVQHDQWARSEPTTKAGMASCI
Ga0318521_108256952	3300031770	Soil	MLTSMRSGVPEKDKNASVSAAEVMGRVAPHDQAWA
Ga0318546_100150356	3300031771	Soil	MLNSTKSGVPEKDKNATANAAEVMGRTVQPHDQTWARSEPTKAG
Ga0318546_102914752	3300031771	Soil	LTSTKSGVPEKDRNASVSAAEVIGRIVQHDQTWAKSE
Ga0318543_103522281	3300031777	Soil	MLNSMKSSAPEKDKNAAANAAEIMGRTVQPHDQAGSDPTTKAGTASC
Ga0318498_102516251	3300031778	Soil	MLNSTKSGVPEKDKNATANAAEVMGRTVQPHDQTWARSEPTKAGTAS
Ga0318508_10017426	3300031780	Soil	MLNSTKSGVPEKDKNATANAAEVMGRTVQPHDQTW
Ga0318529_101093352	3300031792	Soil	MLNSMKSGVPEKDKNATVNAPEVLGRTVQPHDQAWAR
Ga0318548_104355801	3300031793	Soil	MLNSMKTDVLEKDKNSAANAAEVMGRTAQPHDQAWARSEPTKAGTASC
Ga0318503_100247874	3300031794	Soil	MLTSTKSGAPEKDRNASVGAAEVMGRVVQHDQTWAKLGPTTRAGMAS
Ga0318503_102395372	3300031794	Soil	MLNSTKSGVPEKDKNATANAAEVMGRTVQPHDQTWARSEPTKAGTASCIGS
Ga0318576_103137932	3300031796	Soil	MLISTKSGAPEKDRNASLSAAEVMGRVVPHEQTWARS
Ga0318550_105350161	3300031797	Soil	MLTSTKNGAPEKDGNASVGAAEVMGRVVQHDQWPRSE
Ga0318523_105399801	3300031798	Soil	MLNSMKSGAPEKDKSVAANAPDVMGRMVQPHDQAWARSEPTTKAGTASCI
Ga0318497_101569691	3300031805	Soil	MLNSTKSGTPEKDRSVAANAPEVLGRTVQPHDQAWARSEPTTKAG
Ga0318568_100630464	3300031819	Soil	MLISTKSGAPEKDRNASLSAAEVMGRVVPHEQTWARSEPSTKAGTAS
Ga0318568_101427041	3300031819	Soil	MLNSMKSGAPEKDKSAAANAPEVMGRMVQPHDQTWARSEPTT
Ga0318567_104582842	3300031821	Soil	MLKSGVPEKDKNATATAPEVLGRTMQSHDQAWARSEPTTKA
Ga0310917_100441481	3300031833	Soil	MLTSTKSGVPEKDRNASVSAAEVIGRVQHDQTWAKSEPTTNAGMASCIGSDM
Ga0310917_103608573	3300031833	Soil	MLISTKSGAPEKDRNASVSAAEVTGRVVPHDQTWARSEPTT
Ga0310917_106444391	3300031833	Soil	LISTKSGAPENDRNASASPAEVMGRVVPHDQTWARSEPMTK
Ga0310917_109824121	3300031833	Soil	LISPKSGAPEKDRNASVSAAESRVVPHDQTWARSEPTTKAGMA
Ga0310917_110103362	3300031833	Soil	MLTSTKSGTPEKDRNASVSAAEVMGRVMQHDQTWAKSEPTTKAGMASCIG
Ga0318517_100088409	3300031835	Soil	MLTSTKSGAPEKDRNASVGAAEVMGRVVQHDQTWA
Ga0318511_105676312	3300031845	Soil	MLNSMKSSATEKDRNAAATAPEVLGRTVQPHDQAWARSEPTTKAGTASCIG
Ga0318512_100536871	3300031846	Soil	MFTKSGAPEKDRNASVSAAEVMGRVVPHDQSSVRSESTTK
Ga0306919_114065882	3300031879	Soil	MLTSTKSGTPEKDRNASVSAAEVMGRVMQHDPTWAKLEPTTK
Ga0306925_101081844	3300031890	Soil	MLTSTKSGVPETDRNASVSAAEVIGRVVQHDQTWA
Ga0306925_102607763	3300031890	Soil	MLISTKSGAPEKDKNGPVSAADVMGRVVPHDQTWARS
Ga0318551_107824151	3300031896	Soil	MLISTKSGAPEKDRNASVSAAEVMGRVVPHDQSWA
Ga0318520_100330431	3300031897	Soil	MLISTKSGAPEKDKNGPVSAADVMGRVVPHDQTWARSE
Ga0318520_101781461	3300031897	Soil	MLNSMKSGVPEKDKNATASAPEVLGRTVQPHDQAWARSEPTTKAGTASCI
Ga0318520_106901442	3300031897	Soil	MLISTKSGAPEKDRNGPVSAADVMGRVVPHDQTWARSEPTTKAGTASCIGSD
Ga0306923_100552836	3300031910	Soil	MLNSMKTDVPEKDKNSAANTAEVMGRTVQPHDPAWARL
Ga0306923_103153723	3300031910	Soil	MLIGTKSGASEKDRKASVSAAEVMGRVMPHDQALTRSEPTTKAGTASCIGSD
Ga0306923_107025263	3300031910	Soil	MLTSTKSGVLEKDRNASVGAAEVMGRVAPHDQWPRSEPTTKA
Ga0306923_123266961	3300031910	Soil	MLISTKSGAPEKDRNASVSAADVMGRVVPHDQTWARSEPTTRAGTAS
Ga0306923_124460372	3300031910	Soil	MLTSTKSGTPEKDRNASVSAAEVMGRVMQHDQTWAKSEPTTK
Ga0306921_102235821	3300031912	Soil	MLISTKSGAPEKDRNASVGAAEVMGRVVPHDQTWA
Ga0306921_111692961	3300031912	Soil	MLTSTKSGTPEKDRNASVSAAEVMGRVMQHDQTWAKSEPTTKAGMASCI
Ga0306921_120673632	3300031912	Soil	MLISTKSGVPEKDRNGPVSAAEVMGRVVPHDQTWARS
Ga0306921_121182112	3300031912	Soil	MLNSMKSGVPEKDKNATATAPEVLGRTVQPHDQAWARSEPTKAGT
Ga0306921_122725812	3300031912	Soil	MLTSTKSGVPETDRNASVSAAEVIGRVVQHDQTWAKSEPTTKAEMASCI
Ga0310916_102109551	3300031942	Soil	MLNSMKSGAPEKSKNAATSVAEVIGRTVQPHDHAWAGSEP
Ga0310910_1000725010	3300031946	Soil	MLTSTRSGVPEKDRNASVSAAEVMGKVTPHDQAWTRSEPTTKAGTAS
Ga0310910_115085532	3300031946	Soil	MLNSMKTDVPEKDKNSAANAAEVMGRTAQPHDQAWARSEPTKAG
Ga0310909_113242281	3300031947	Soil	MLNSTKSGVPEKDKNAAANAAEVMGRTVQHDQAWVRSEPTKA
Ga0310909_114796971	3300031947	Soil	MLISPKSGAPEKDRNASVSAAESRVVPHDQTWARSEP
Ga0306926_106647371	3300031954	Soil	MVLISTKSGAPEKDRNASVGAAEVMGRVVPHDQTWARSEPTT
Ga0306926_115752721	3300031954	Soil	MLNSMKSGAPEKSKNAAASVAEVIGRTVQPHDHAWA
Ga0306926_115969211	3300031954	Soil	MLTSTKSGVPEKDRNASVSAAEVIGRIVQHDQTWAKSEPTTKA
Ga0318530_105017511	3300031959	Soil	MLISTKSGAPEKDKNGPVSAAEVMGKVVPHDQTWA
Ga0318531_102364852	3300031981	Soil	MLISTKSGAPEKDRNASLSAAEVMGRVVPHEQTWARSE
Ga0318531_105359001	3300031981	Soil	MLTSTRSGVPEKDRNASVSAAEVMGKVTPHDQAWARSEPTTKAG
Ga0306922_103836893	3300032001	Soil	MLTSTKSGTPEKDRNASVSAAEVMGRVVQHDQTWAKSEPTTK
Ga0306922_113239091	3300032001	Soil	MLNSMKSGAPEKDKSVAANAPDVMGRMVQPHDQAWA
Ga0306922_113452341	3300032001	Soil	MWSGVPEKDKNASVSAAEVMGRVAPHDQTWARSEPTTKA
Ga0306922_119946671	3300032001	Soil	MLTSTKNGAPEKDRNASVGAAEVMGRVVQHDQWPRSE
Ga0318507_101468524	3300032025	Soil	MLTSTKSGAPEKDRNASVGAAEVMGRVVQHDQTWAKLGPTTRAGMA
Ga0318507_102486931	3300032025	Soil	MLNSMKSSAPEKDKNAAANAAEIMGRTVQPHDQAGSDPTTKAGT
Ga0318507_103259532	3300032025	Soil	MLNSTKSGVPEKDKNAAANAAEVMGRTVQHDQAWVRSE
Ga0310911_109193681	3300032035	Soil	MLISTKSGAPEKDRNASVSAADVMGRVVPHDQTWARSELTT
Ga0318559_101104082	3300032039	Soil	MLNSTKSDTPEKDRSVAANAPEVLGRTVQPHDQAWARSEPTMKAGTASC
Ga0318556_106696141	3300032043	Soil	MLNSMKTDVLEKDKNSAANAAEVMGKTAQPHDQAW
Ga0318575_100690061	3300032055	Soil	MLTSTKSGAPEKDRNASVGAAEVMGRVVQHDQTWAK
Ga0318505_103969091	3300032060	Soil	LISTKSGAPENDRNASASSAEVMGRVVPHDQNWARSEPMTKAGMAS
Ga0318505_105261342	3300032060	Soil	MLNSMKTDVLEKDKNSAANAAEVMGKTAQPHDQAWA
Ga0318504_102000052	3300032063	Soil	MLTSTKSGTPEKDRNASVSAAEVMGRVMQHDQTWAKSEPTTKAGMASCIGSD
Ga0318504_104717631	3300032063	Soil	MLNSTKSGVPEKDKNAAANAAEVMGRTVQPHDQAWARSEPTKAGTASCIG
Ga0318514_100935291	3300032066	Soil	MLNSTKSGVPEKDKNATANAAEVMGRTVQPHDQTWARSEPTKA
Ga0318553_102004331	3300032068	Soil	MLNSTKSGVPEKDKNATANAAEVMGRTVQPHDQTWARSEPTKAGTASC
Ga0306924_106116381	3300032076	Soil	MLTSTKSGVPEKDKNTSVSAAEVMGRVMHHDQTWARSEPTTKAGMASCI
Ga0306924_118794622	3300032076	Soil	MLISTKSGVPEKDGNGPVSAAEVMGRVVPHDQTWARS
Ga0318518_101841351	3300032090	Soil	MLTSTKSSVPEKDRNASVSAADVIGRVVPHDQTWAKSEPTT
Ga0318540_103259283	3300032094	Soil	MLISTKSGAPEKDRNASVSAADVMGRVVPHDQTWARSE
Ga0318540_103531542	3300032094	Soil	MLNSMKSSAPEKDKNAAANAAEIMGRTVQPHDQAGSD
Ga0306920_1002041791	3300032261	Soil	MLTSTKSGVPETDRNASVSAAEVIGRVVQHDQTWAK
Ga0306920_1013504611	3300032261	Soil	MLNSMKTDVLEKDKNSAANAAEVMGRTAQPHDQAWA
Ga0306920_1017959331	3300032261	Soil	MLTSTKSGTPEKDRNASVSAAEVMGRVMQHDQTWAKSEPTTKAGMASCIGS
Ga0306920_1018530781	3300032261	Soil	MLTSTKSGVPEKDRNASVGAAEVMGRVAPQWPRSEPTTKAG
Ga0306920_1022959112	3300032261	Soil	MLNSMKSGLPEKDKNATASAPEVLGRTVQPHDQAWARSEPTTKA
Ga0306920_1028419471	3300032261	Soil	MLISTKSGAPENDRNASVSAAEVVGRVVPHDQSWA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F032024

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences