Metagenome / Metatranscriptome Family F031807

Basic Information
Family ID	F031807
Family Type	Metagenome / Metatranscriptome
Number of Sequences	181
Average Sequence Length	39 residues
Representative Sequence	YFWLYMGSFGIGLGAVAIAFTFRPPRPLPAALPSPSVAG
Number of Associated Samples	156
Number of Associated Scaffolds	181

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.55 %
% of genes near scaffold ends (potentially truncated)	98.90 %
% of genes from short scaffolds (< 2000 bps)	89.50 %
Associated GOLD sequencing projects	147
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Most Common Taxonomy
Group	Bacteria (90.055 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (13.812 % of family members)
Environment Ontology (ENVO)	Unclassified (22.652 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.304 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 29.85% β-sheet: 0.00% Coil/Unstructured: 70.15%
Feature Viewer

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Pfam ID	Name	% Frequency in 181 Family Scaffolds
PF03795	YCII	11.60
PF11716	MDMPI_N	4.97
PF02515	CoA_transf_3	2.76
PF13561	adh_short_C2	2.21
PF13801	Metal_resist	2.21
PF00211	Guanylate_cyc	2.21
PF01909	NTP_transf_2	1.66
PF00005	ABC_tran	1.66
PF00999	Na_H_Exchanger	1.66
PF00724	Oxidored_FMN	1.10
PF07519	Tannase	1.10
PF00575	S1	1.10
PF07690	MFS_1	1.10
PF07883	Cupin_2	1.10
PF02012	BNR	1.10
PF12681	Glyoxalase_2	1.10
PF00296	Bac_luciferase	1.10
PF05721	PhyH	1.10
PF07992	Pyr_redox_2	1.10
PF01471	PG_binding_1	1.10
PF04909	Amidohydro_2	1.10
PF00528	BPD_transp_1	1.10
PF07995	GSDH	1.10
PF12773	DZR	1.10
PF08327	AHSA1	0.55
PF11723	Aromatic_hydrox	0.55
PF13522	GATase_6	0.55
PF01075	Glyco_transf_9	0.55
PF00664	ABC_membrane	0.55
PF02417	Chromate_transp	0.55
PF12849	PBP_like_2	0.55
PF08883	DOPA_dioxygen	0.55
PF01547	SBP_bac_1	0.55
PF12836	HHH_3	0.55
PF07302	AroM	0.55
PF02518	HATPase_c	0.55
PF13480	Acetyltransf_6	0.55
PF09347	DUF1989	0.55
PF00815	Histidinol_dh	0.55
PF12710	HAD	0.55
PF03466	LysR_substrate	0.55
PF01464	SLT	0.55
PF08281	Sigma70_r4_2	0.55
PF03401	TctC	0.55
PF15071	TMEM220	0.55
PF13088	BNR_2	0.55
PF00891	Methyltransf_2	0.55
PF04248	NTP_transf_9	0.55
PF04199	Cyclase	0.55
PF00581	Rhodanese	0.55
PF14833	NAD_binding_11	0.55
PF01734	Patatin	0.55
PF01717	Meth_synt_2	0.55
PF02775	TPP_enzyme_C	0.55
PF13602	ADH_zinc_N_2	0.55
PF04542	Sigma70_r2	0.55
PF00011	HSP20	0.55
PF13302	Acetyltransf_3	0.55
PF04986	Y2_Tnp	0.55
PF11373	DUF3175	0.55
PF14559	TPR_19	0.55

COG ID	Name	Functional Category	% Frequency in 181 Family Scaffolds
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	11.60
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	2.76
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	2.21
COG0025	NhaP-type Na+/H+ or K+/H+ antiporter	Inorganic ion transport and metabolism [P]	1.66
COG4651	Predicted Kef-type K+ transport protein, K+/H+ antiporter domain	Inorganic ion transport and metabolism [P]	1.66
COG0475	Kef-type K+ transport system, membrane component KefB	Inorganic ion transport and metabolism [P]	1.66
COG3263	NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains	Energy production and conversion [C]	1.66
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	1.66
COG0042	tRNA-dihydrouridine synthase	Translation, ribosomal structure and biogenesis [J]	1.10
COG5285	Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.10
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	1.10
COG2133	Glucose/arabinose dehydrogenase, beta-propeller fold	Carbohydrate transport and metabolism [G]	1.10
COG1902	2,4-dienoyl-CoA reductase or related NADH-dependent reductase, Old Yellow Enzyme (OYE) family	Energy production and conversion [C]	1.10
COG1878	Kynurenine formamidase	Amino acid transport and metabolism [E]	0.55
COG2059	Chromate transport protein ChrA	Inorganic ion transport and metabolism [P]	0.55
COG1752	Predicted acylesterase/phospholipase RssA, containd patatin domain	General function prediction only [R]	0.55
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.55
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.55
COG2343	Uncharacterized conserved protein, DUF427 family	Function unknown [S]	0.55
COG0859	ADP-heptose:LPS heptosyltransferase	Cell wall/membrane/envelope biogenesis [M]	0.55
COG0620	Methionine synthase II (cobalamin-independent)	Amino acid transport and metabolism [E]	0.55
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.55
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.55
COG3621	Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotR	General function prediction only [R]	0.55
COG3805	Aromatic ring-cleaving dioxygenase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.55
COG0141	Histidinol dehydrogenase	Amino acid transport and metabolism [E]	0.55
COG4667	Predicted phospholipase, patatin/cPLA2 family	Lipid transport and metabolism [I]	0.55
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.55
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	0.55

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	90.61 %
Unclassified	root	N/A	9.39 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	90.61 %
Unclassified	root	N/A	9.39 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	90.06 %
Unclassified	root	N/A	9.39 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.55 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	33.70 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	16.57 %
Unclassified	root	N/A	9.39 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.66 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.10 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.10 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.55 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.55 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	16.57 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	13.81 %
Unclassified	root	N/A	9.39 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.10 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.10 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.55 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.55 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.55 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	0.55 %
unclassified Euryarchaeota	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota	0.55 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.55 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.55 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	16.02 %
Unclassified	root	N/A	9.39 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4.97 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.66 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.10 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.10 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.55 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.55 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.55 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.55 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.55 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.55 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.55 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.55 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	0.55 %
candidate division NC10	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	0.55 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	13.81 %
Unclassified	root	N/A	9.39 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1.66 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.66 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.10 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.10 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.55 %
unclassified Bacteroidetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes	0.55 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.55 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.55 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	0.55 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.55 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.55 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.55 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.55 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.55 %
candidate division NC10	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	0.55 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	13.81 %
Unclassified	root	N/A	9.39 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.10 %
Acidisphaera	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera	1.10 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.10 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.10 %
unclassified Solirubrobacterales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales	0.55 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	0.55 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.55 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	0.55 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.55 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.55 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.55 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.55 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.55 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.55 %
candidate division NC10	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	0.55 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	13.81 %
Unclassified	root	N/A	9.39 %
unclassified Acidisphaera	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera	1.10 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.10 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.10 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.10 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	0.55 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	0.55 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	0.55 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.55 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.55 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.55 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.55 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.55 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.55 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.55 %
candidate division NC10	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	0.55 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	13.81 %
Unclassified	root	N/A	9.39 %
Acidisphaera sp. S103	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera → Acidisphaera sp. S103	1.10 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.10 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.10 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.10 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	0.55 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	0.55 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	0.55 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.55 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.55 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.55 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.55 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.55 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.55 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.55 %
candidate division NC10	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	0.55 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000559\|F14TC_100664765	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	513	Open in IMG/M
3300002560\|JGI25383J37093_10049786	All Organisms → cellular organisms → Bacteria → Proteobacteria	1356	Open in IMG/M
3300004024\|Ga0055436_10007565	All Organisms → cellular organisms → Bacteria	2281	Open in IMG/M
3300004156\|Ga0062589_101723339	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300005166\|Ga0066674_10442379	All Organisms → cellular organisms → Bacteria → Proteobacteria	595	Open in IMG/M
3300005167\|Ga0066672_10354829	All Organisms → cellular organisms → Bacteria → Proteobacteria	958	Open in IMG/M
3300005180\|Ga0066685_10198836	All Organisms → cellular organisms → Bacteria → Proteobacteria	1375	Open in IMG/M
3300005181\|Ga0066678_10503057	All Organisms → cellular organisms → Bacteria → Proteobacteria	805	Open in IMG/M
3300005332\|Ga0066388_104773967	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300005334\|Ga0068869_100497572	All Organisms → cellular organisms → Bacteria → Proteobacteria	1017	Open in IMG/M
3300005445\|Ga0070708_100354877	All Organisms → cellular organisms → Bacteria	1382	Open in IMG/M
3300005471\|Ga0070698_102123250	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300005534\|Ga0070735_10031302	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	3692	Open in IMG/M
3300005545\|Ga0070695_100623737	All Organisms → cellular organisms → Bacteria	849	Open in IMG/M
3300005545\|Ga0070695_101252070	Not Available	612	Open in IMG/M
3300005555\|Ga0066692_10506309	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300005556\|Ga0066707_10357650	All Organisms → cellular organisms → Bacteria → Proteobacteria	954	Open in IMG/M
3300005558\|Ga0066698_10907484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	564	Open in IMG/M
3300005559\|Ga0066700_10602544	All Organisms → cellular organisms → Bacteria → Proteobacteria	766	Open in IMG/M
3300005577\|Ga0068857_100714543	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	953	Open in IMG/M
3300005617\|Ga0068859_101054613	All Organisms → cellular organisms → Bacteria	893	Open in IMG/M
3300005713\|Ga0066905_100166785	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1607	Open in IMG/M
3300005843\|Ga0068860_100471386	All Organisms → cellular organisms → Bacteria	1250	Open in IMG/M
3300005981\|Ga0081538_10058855	All Organisms → cellular organisms → Bacteria → Proteobacteria	2225	Open in IMG/M
3300006031\|Ga0066651_10728426	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	534	Open in IMG/M
3300006046\|Ga0066652_100647010	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1002	Open in IMG/M
3300006796\|Ga0066665_10457354	All Organisms → cellular organisms → Bacteria	1052	Open in IMG/M
3300006804\|Ga0079221_11466631	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300006847\|Ga0075431_102205796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	505	Open in IMG/M
3300006852\|Ga0075433_10198205	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1785	Open in IMG/M
3300006852\|Ga0075433_11938719	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300006853\|Ga0075420_101166199	Not Available	662	Open in IMG/M
3300006871\|Ga0075434_102263661	All Organisms → cellular organisms → Bacteria → Proteobacteria	547	Open in IMG/M
3300006903\|Ga0075426_10697724	All Organisms → cellular organisms → Bacteria → Proteobacteria	761	Open in IMG/M
3300006904\|Ga0075424_101994736	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300006904\|Ga0075424_102254461	All Organisms → cellular organisms → Bacteria → Proteobacteria	573	Open in IMG/M
3300006914\|Ga0075436_101028824	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300006969\|Ga0075419_10664501	All Organisms → cellular organisms → Bacteria → Proteobacteria	736	Open in IMG/M
3300007076\|Ga0075435_100242702	All Organisms → cellular organisms → Bacteria → Proteobacteria	1532	Open in IMG/M
3300009088\|Ga0099830_11571141	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300009090\|Ga0099827_10046869	All Organisms → cellular organisms → Bacteria → Proteobacteria	3232	Open in IMG/M
3300009090\|Ga0099827_10941527	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300009098\|Ga0105245_10735589	All Organisms → cellular organisms → Bacteria	1022	Open in IMG/M
3300009100\|Ga0075418_12450521	All Organisms → cellular organisms → Bacteria → Proteobacteria	569	Open in IMG/M
3300009137\|Ga0066709_102139824	All Organisms → cellular organisms → Bacteria → Proteobacteria	773	Open in IMG/M
3300009147\|Ga0114129_13416343	All Organisms → cellular organisms → Bacteria → Proteobacteria	510	Open in IMG/M
3300009148\|Ga0105243_12780920	Not Available	530	Open in IMG/M
3300009162\|Ga0075423_11492226	All Organisms → cellular organisms → Bacteria → Proteobacteria	725	Open in IMG/M
3300009553\|Ga0105249_13175218	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	528	Open in IMG/M
3300010043\|Ga0126380_11967473	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	534	Open in IMG/M
3300010048\|Ga0126373_10261148	All Organisms → cellular organisms → Bacteria	1709	Open in IMG/M
3300010048\|Ga0126373_12254656	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	605	Open in IMG/M
3300010304\|Ga0134088_10508150	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300010358\|Ga0126370_12019363	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300010358\|Ga0126370_12623956	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300010359\|Ga0126376_10114036	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2092	Open in IMG/M
3300010359\|Ga0126376_12283987	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300010359\|Ga0126376_13027303	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300010360\|Ga0126372_12158848	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300010360\|Ga0126372_13219438	All Organisms → cellular organisms → Bacteria → Proteobacteria	507	Open in IMG/M
3300010361\|Ga0126378_13280158	Not Available	514	Open in IMG/M
3300010362\|Ga0126377_11581684	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300010362\|Ga0126377_12903044	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300010366\|Ga0126379_13871509	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300010371\|Ga0134125_12882069	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300010373\|Ga0134128_12150103	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	615	Open in IMG/M
3300010376\|Ga0126381_101058759	All Organisms → cellular organisms → Bacteria	1171	Open in IMG/M
3300010376\|Ga0126381_102044121	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	825	Open in IMG/M
3300010376\|Ga0126381_102912883	Not Available	681	Open in IMG/M
3300010391\|Ga0136847_13597996	All Organisms → cellular organisms → Bacteria	939	Open in IMG/M
3300010398\|Ga0126383_11837876	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	694	Open in IMG/M
3300010398\|Ga0126383_12229984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera → Acidisphaera sp. S103	634	Open in IMG/M
3300010399\|Ga0134127_12770076	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	570	Open in IMG/M
3300010400\|Ga0134122_13394282	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300010401\|Ga0134121_12831560	Not Available	531	Open in IMG/M
3300011270\|Ga0137391_10634859	All Organisms → cellular organisms → Bacteria	892	Open in IMG/M
3300012171\|Ga0137342_1044201	All Organisms → cellular organisms → Bacteria	886	Open in IMG/M
3300012202\|Ga0137363_11341472	Not Available	604	Open in IMG/M
3300012205\|Ga0137362_10023073	All Organisms → cellular organisms → Bacteria	4829	Open in IMG/M
3300012205\|Ga0137362_10405196	Not Available	1181	Open in IMG/M
3300012205\|Ga0137362_10858942	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	776	Open in IMG/M
3300012208\|Ga0137376_10493571	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1062	Open in IMG/M
3300012355\|Ga0137369_10157489	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	1797	Open in IMG/M
3300012361\|Ga0137360_10013053	All Organisms → cellular organisms → Bacteria	5348	Open in IMG/M
3300012362\|Ga0137361_10064290	All Organisms → cellular organisms → Bacteria	3082	Open in IMG/M
3300012362\|Ga0137361_10162096	All Organisms → cellular organisms → Bacteria	2006	Open in IMG/M
3300012362\|Ga0137361_10352325	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1351	Open in IMG/M
3300012400\|Ga0134048_1370231	All Organisms → cellular organisms → Bacteria	739	Open in IMG/M
3300012582\|Ga0137358_10286331	All Organisms → cellular organisms → Bacteria	1119	Open in IMG/M
3300012924\|Ga0137413_10852783	Not Available	704	Open in IMG/M
3300012927\|Ga0137416_10421482	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1135	Open in IMG/M
3300012930\|Ga0137407_11975124	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300012944\|Ga0137410_10561690	All Organisms → cellular organisms → Bacteria → Proteobacteria	939	Open in IMG/M
3300012976\|Ga0134076_10556502	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	531	Open in IMG/M
3300013306\|Ga0163162_10792520	All Organisms → cellular organisms → Bacteria	1065	Open in IMG/M
3300015241\|Ga0137418_10170494	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1902	Open in IMG/M
3300015241\|Ga0137418_10473619	All Organisms → cellular organisms → Bacteria → Proteobacteria	1007	Open in IMG/M
3300016319\|Ga0182033_11003905	All Organisms → cellular organisms → Bacteria → Proteobacteria	742	Open in IMG/M
3300016371\|Ga0182034_11092902	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	691	Open in IMG/M
3300016422\|Ga0182039_10422226	All Organisms → cellular organisms → Bacteria	1136	Open in IMG/M
3300017656\|Ga0134112_10003034	All Organisms → cellular organisms → Bacteria → Proteobacteria	5191	Open in IMG/M
3300017656\|Ga0134112_10113628	All Organisms → cellular organisms → Bacteria → Proteobacteria	1024	Open in IMG/M
3300018031\|Ga0184634_10490055	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300019254\|Ga0184641_1001907	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	597	Open in IMG/M
3300019362\|Ga0173479_10152009	All Organisms → cellular organisms → Bacteria	926	Open in IMG/M
3300020004\|Ga0193755_1178549	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300020060\|Ga0193717_1187591	Not Available	571	Open in IMG/M
3300020580\|Ga0210403_10594522	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	894	Open in IMG/M
3300021073\|Ga0210378_10070168	All Organisms → cellular organisms → Bacteria → Acidobacteria	1374	Open in IMG/M
3300021080\|Ga0210382_10505757	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	535	Open in IMG/M
3300021088\|Ga0210404_10886965	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300021362\|Ga0213882_10027118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2201	Open in IMG/M
3300021377\|Ga0213874_10325104	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	584	Open in IMG/M
3300021404\|Ga0210389_10415478	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1058	Open in IMG/M
3300021407\|Ga0210383_11387266	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	585	Open in IMG/M
3300021432\|Ga0210384_10376669	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1278	Open in IMG/M
3300021432\|Ga0210384_11021704	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera → Acidisphaera sp. S103	729	Open in IMG/M
3300021433\|Ga0210391_10597112	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	867	Open in IMG/M
3300021474\|Ga0210390_11515941	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	530	Open in IMG/M
3300021560\|Ga0126371_11871252	Not Available	720	Open in IMG/M
3300022708\|Ga0242670_1039112	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	641	Open in IMG/M
3300025538\|Ga0210132_1022126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	888	Open in IMG/M
3300025928\|Ga0207700_10569382	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1007	Open in IMG/M
3300025933\|Ga0207706_10845629	Not Available	775	Open in IMG/M
3300025944\|Ga0207661_11213067	Not Available	694	Open in IMG/M
3300025961\|Ga0207712_11443559	All Organisms → cellular organisms → Bacteria → Proteobacteria	616	Open in IMG/M
3300025972\|Ga0207668_11689052	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	572	Open in IMG/M
3300026035\|Ga0207703_11937288	All Organisms → cellular organisms → Bacteria → Proteobacteria	565	Open in IMG/M
3300026089\|Ga0207648_11380373	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	662	Open in IMG/M
3300026295\|Ga0209234_1127258	All Organisms → cellular organisms → Bacteria	931	Open in IMG/M
3300026318\|Ga0209471_1240353	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300026320\|Ga0209131_1016774	All Organisms → cellular organisms → Bacteria	4458	Open in IMG/M
3300026322\|Ga0209687_1263746	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	537	Open in IMG/M
3300026326\|Ga0209801_1365882	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300026327\|Ga0209266_1191117	All Organisms → cellular organisms → Bacteria → Proteobacteria	758	Open in IMG/M
3300026330\|Ga0209473_1051098	All Organisms → cellular organisms → Bacteria	1804	Open in IMG/M
3300026376\|Ga0257167_1018848	All Organisms → cellular organisms → Bacteria	978	Open in IMG/M
3300026529\|Ga0209806_1045889	All Organisms → cellular organisms → Bacteria	2080	Open in IMG/M
3300026529\|Ga0209806_1104283	All Organisms → cellular organisms → Bacteria	1200	Open in IMG/M
3300026536\|Ga0209058_1221563	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300026538\|Ga0209056_10440057	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	756	Open in IMG/M
3300026552\|Ga0209577_10026774	All Organisms → cellular organisms → Bacteria	5047	Open in IMG/M
3300027521\|Ga0209524_1118428	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	553	Open in IMG/M
3300027655\|Ga0209388_1072814	All Organisms → cellular organisms → Bacteria	990	Open in IMG/M
3300027671\|Ga0209588_1051379	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1333	Open in IMG/M
3300027695\|Ga0209966_1147462	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	547	Open in IMG/M
3300027862\|Ga0209701_10373249	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	802	Open in IMG/M
3300027880\|Ga0209481_10461195	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300027882\|Ga0209590_10579634	All Organisms → cellular organisms → Bacteria	722	Open in IMG/M
3300030336\|Ga0247826_10778131	All Organisms → cellular organisms → Bacteria	748	Open in IMG/M
3300030743\|Ga0265461_13235438	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300031544\|Ga0318534_10651080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	597	Open in IMG/M
3300031708\|Ga0310686_109551974	All Organisms → cellular organisms → Bacteria	2078	Open in IMG/M
3300031720\|Ga0307469_10023221	All Organisms → cellular organisms → Bacteria → Proteobacteria	3427	Open in IMG/M
3300031720\|Ga0307469_10302048	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1319	Open in IMG/M
3300031740\|Ga0307468_101129776	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	700	Open in IMG/M
3300031740\|Ga0307468_101288708	Not Available	664	Open in IMG/M
3300031744\|Ga0306918_11303264	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	559	Open in IMG/M
3300031753\|Ga0307477_10964663	All Organisms → cellular organisms → Bacteria → Proteobacteria	560	Open in IMG/M
3300031754\|Ga0307475_11558378	All Organisms → cellular organisms → Bacteria → Proteobacteria	506	Open in IMG/M
3300031765\|Ga0318554_10064742	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2020	Open in IMG/M
3300031768\|Ga0318509_10320343	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	868	Open in IMG/M
3300031820\|Ga0307473_10227893	All Organisms → cellular organisms → Bacteria	1126	Open in IMG/M
3300031833\|Ga0310917_11020762	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	554	Open in IMG/M
3300031845\|Ga0318511_10360353	All Organisms → cellular organisms → Bacteria → Proteobacteria	663	Open in IMG/M
3300031890\|Ga0306925_12255905	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	504	Open in IMG/M
3300031910\|Ga0306923_10133701	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2823	Open in IMG/M
3300031941\|Ga0310912_10703268	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	783	Open in IMG/M
3300031945\|Ga0310913_10760540	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	684	Open in IMG/M
3300032001\|Ga0306922_11679581	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	629	Open in IMG/M
3300032009\|Ga0318563_10384336	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	760	Open in IMG/M
3300032055\|Ga0318575_10176750	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1068	Open in IMG/M
3300032059\|Ga0318533_10008001	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6255	Open in IMG/M
3300032076\|Ga0306924_11367113	Not Available	757	Open in IMG/M
3300032089\|Ga0318525_10070116	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1760	Open in IMG/M
3300032180\|Ga0307471_102047562	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300032205\|Ga0307472_101206610	Not Available	723	Open in IMG/M
3300032205\|Ga0307472_102117821	All Organisms → cellular organisms → Bacteria → Proteobacteria	566	Open in IMG/M
3300032205\|Ga0307472_102186160	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	558	Open in IMG/M
3300033004\|Ga0335084_11546264	Not Available	655	Open in IMG/M
3300033433\|Ga0326726_11449708	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	668	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	82.87%
Host-Associated	Host-Associated	17.13%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	78.45%
Plants	Host-Associated → Plants	17.13%
Aquatic	Environmental → Aquatic	4.42%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	77.35%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.60%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.42%
Freshwater	Environmental → Aquatic → Freshwater	2.21%
Marine	Environmental → Aquatic → Marine	1.10%
Sediment	Environmental → Aquatic → Sediment	1.10%
Roots	Host-Associated → Plants → Roots	1.10%
Peat	Environmental → Terrestrial → Peat	0.55%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.55%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	71.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.50%
Loam	Environmental → Terrestrial → Soil → Loam	5.52%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.42%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.66%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.10%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.10%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.10%
Lake	Environmental → Aquatic → Freshwater → Lake	0.55%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.55%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.55%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.55%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.55%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.55%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.15%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	22.65%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	13.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.42%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.31%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.66%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.66%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.10%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.10%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.10%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.10%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.55%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.55%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.55%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.55%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.55%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.55%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.55%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.55%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	13.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	11.60%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	11.05%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.29%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.42%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.21%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.21%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.66%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.66%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.10%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.10%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.10%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.10%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.10%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	0.55%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.55%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.55%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.55%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.55%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.55%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.55%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.55%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.55%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.55%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.55%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.55%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.55%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.55%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	0.55%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.55%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.55%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.55%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300004024	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D2	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012171	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT466_2	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012400	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300019254	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020060	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c2	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021362	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R09	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022708	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025538	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026376	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-B	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027521	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027695	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes)	Host-Associated	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F031807

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F14TC_1006647652	3300000559	Soil	WLYMGSFGIGLGAVAIAFTFRQPGPSTVTLPSPSAAH*
JGI25383J37093_100497864	3300002560	Grasslands Soil	SYVWLFIGSAGIGLGAVAIALTFKAPRQLGAALPSPSVS*
Ga0055436_100075656	3300004024	Natural And Restored Wetlands	GSYFWLYMGSFGIGLGAVAIAVTFRAPRRLPAALAAPSLAR*
Ga0062589_1017233391	3300004156	Soil	SYAWLFIGSAAIGLGAVAIAFTFRPPRSLPAVLPSPSVAH*
Ga0066674_104423791	3300005166	Soil	GSYFWLYMGSFGIGLGAVAIAFTFRPPRQLPAALPVPSAAH*
Ga0066672_103548291	3300005167	Soil	FGSYVWLFIGSAGIGLGAVAIALTFRPPRQLSPALPSPSLAH*
Ga0066685_101988363	3300005180	Soil	LGSYFWLYMGSFGIGLGAVAIAFTFRPPRRLPAALPSPVVAG*
Ga0066678_105030572	3300005181	Soil	YFWLYIGSFGIGLGAVAIAITFRPPRREPAAMPAPSLAH*
Ga0066388_1047739672	3300005332	Tropical Forest Soil	SYFWLFIGSAGIGLGAAAIAFTFRAPRQVPAGIPTASLAH*
Ga0068869_1004975721	3300005334	Miscanthus Rhizosphere	YFWLYMGSFGIGLGAVAIAFTFRPPRRVPVVLPAPSLAH*
Ga0070708_1003548772	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	GYFWLFLGSFGIGVAAVAIAVTFRAPGPAPVVLATPSAAH*
Ga0070698_1021232502	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	SYAWLFIGSCGIGLGAVAIAFTFRPPRELPAVLPDPSMAH*
Ga0070735_100313021	3300005534	Surface Soil	SYFWLYIGSFGIGLGAVAIALTFRPPATRPLVLASSLA*
Ga0070695_1006237373	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	GSYAWLFIGSAAIGLGAVAIALTFRPPRELSAALPSPSVAH*
Ga0070695_1012520702	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	TSGSYAWLFIGSAAIGLGAVAIAFTFRPPRSLSAALPSPSVAH*
Ga0066692_105063091	3300005555	Soil	WLFIGSAGIGLGAVGIALTFRAPRPLSPALPTPSLAH*
Ga0066707_103576503	3300005556	Soil	GSYFWLYIGSFGIGLGAVAIAFTFSPAGELGAAVPSPSMAHGV*
Ga0066698_109074842	3300005558	Soil	SFGIGLGAVAIAFTFRPPRERSVGLPRPSVTQSA*
Ga0066700_106025441	3300005559	Soil	FWLYIGSFGIGLGAVAIALTFRPPREISVALPGASVTQRA*
Ga0068857_1007145432	3300005577	Corn Rhizosphere	GSYFWLYMGSFGIGLGAVAIALTFRPPRAARALVPAPSAGG*
Ga0068859_1010546132	3300005617	Switchgrass Rhizosphere	LYMGSFGIGLGAVAIALTFRPPRAARALVPAPSAGG*
Ga0066905_1001667852	3300005713	Tropical Forest Soil	FWLYVGSFGIGLGAVAIAFTFRPPRRAPAALPTPSLAT*
Ga0068860_1004713862	3300005843	Switchgrass Rhizosphere	GSYFWLYMGSFGIGLGAVAIAITFRPPRPVMSAMPRPVAAL*
Ga0081538_100588551	3300005981	Tabebuia Heterophylla Rhizosphere	YAALGSYAWLFMGWGGIGLGAVAIACTFRPPRPLPAALPSPSVAH*
Ga0066651_107284262	3300006031	Soil	SYFWLYIGSFGIGLGAVAIAFSFRPPRQLAAALPSPSLAH*
Ga0066652_1006470101	3300006046	Soil	SYAWLYIGSTAIGLGAIAIALTFRPPRVLLVGLPAPSPAG*
Ga0066665_104573544	3300006796	Soil	WLFVGSFGIGLGAVAIAATFRAPRPLLAAAVPSPSIS*
Ga0079221_114666312	3300006804	Agricultural Soil	VGSFGIGLGAVAIAFTFRPPHDLSLGLPSPSVTQSA*
Ga0075431_1022057961	3300006847	Populus Rhizosphere	LWLYVGSSAIGLGAIAIAVTFRPPRRVALALPNPAPAG*
Ga0075433_101982054	3300006852	Populus Rhizosphere	YFWLYMGSFGIGLGAVAIAFTFRPPRPLPAALPSPSVAG*
Ga0075433_119387192	3300006852	Populus Rhizosphere	FWLFIASATIGVGAVAVAFTFRSPRQAPATLASPQEVTS*
Ga0075420_1011661992	3300006853	Populus Rhizosphere	MVFIASSAIGVGAVAIALTFRPPRAVPVALPSPSAAH*
Ga0075434_1022636612	3300006871	Populus Rhizosphere	WLFIGSFGIGLGAVAIALTFRPPRALPAALPSPSPAS*
Ga0075426_106977242	3300006903	Populus Rhizosphere	FWLYMGSFGIGLGAVAIAFTFRPPRRVLAALPTPSPAH*
Ga0075424_1019947362	3300006904	Populus Rhizosphere	GSYAWLFIGSCAIGLGAVAIASTFRPPRAIAVPLPVPSPAR*
Ga0075424_1022544611	3300006904	Populus Rhizosphere	LFIGSFGIGLGAVAIALTFRPPRALPAALPSPSPAS*
Ga0075436_1010288241	3300006914	Populus Rhizosphere	SYAWLFIGSFGIGLGAVAIALTFRPPRTLAAVLPSALAAG*
Ga0075419_106645013	3300006969	Populus Rhizosphere	GSYFWLFAGSAGIGLGAVAIAATFRPPQPVQVPLPTPSLAG*
Ga0075435_1002427022	3300007076	Populus Rhizosphere	GYFWLYMGSFGIGLGAVAIAFTFRPPRRVLAALPTPSPAH*
Ga0099830_115711412	3300009088	Vadose Zone Soil	YMGSFGIGLGAVAIAFTFRPPRQLPAALPVPSVAH*
Ga0099827_100468691	3300009090	Vadose Zone Soil	FGSYFWLYMGSFGIGLGAVAIAFTFRAPRQLPVALPSPSVAH*
Ga0099827_109415271	3300009090	Vadose Zone Soil	MGSFGIGLGAVAIAMTFRPPSRAPAAAPSPSLAH*
Ga0105245_107355891	3300009098	Miscanthus Rhizosphere	MGSFGIGLGAVAIAITFRPPRPVMSAMPRPVAAL*
Ga0075418_124505211	3300009100	Populus Rhizosphere	SLGSYFWLYMGSFGIGLGAVAIAFTFRPPRRIPAALPSPSVAG*
Ga0066709_1021398243	3300009137	Grasslands Soil	GSFGIGLGAVVIALTFRPPRELSLALPSPSVTQSA*
Ga0114129_134163432	3300009147	Populus Rhizosphere	SYVWLYIASSGIGLGAIAIALTFRAPRTLPAALPSPGLAG*
Ga0105243_127809202	3300009148	Miscanthus Rhizosphere	FWLFVSSSAIGLGAVAIALTFRPPRPAGLPLPVPSPAR*
Ga0075423_114922263	3300009162	Populus Rhizosphere	WLFIGSAGIGLGAVAIALTFKAPRPLGAALPSPSVS*
Ga0105249_131752182	3300009553	Switchgrass Rhizosphere	YFWMYMGSAGIGLGAVAIAFTFRPPERQPVALAAAGVA*
Ga0126380_119674732	3300010043	Tropical Forest Soil	YIGSFGIGLGAVAIAFTFRAPRQLSLALPSPRVA*
Ga0126373_102611484	3300010048	Tropical Forest Soil	YIGSFGIGLGAVAIALTFRPPREFSLALASPRVA*
Ga0126373_122546562	3300010048	Tropical Forest Soil	NYFWLFIGSFGIGLGAVAIALTFRPPRELSLALPRSRLAQGAE*
Ga0134088_105081501	3300010304	Grasslands Soil	FWLYMGSFGIGLGAVAIAFTFRPPRRLPAAMPSPIAAG*
Ga0126370_120193631	3300010358	Tropical Forest Soil	TFGSYFWLFIGSAGIGLGAAAIAFTFRAPRQVPAGIPTASLAH*
Ga0126370_126239561	3300010358	Tropical Forest Soil	YMGSFGIGLGAVAIAFTFRPPRRQPAALPSPSLAT*
Ga0126376_101140363	3300010359	Tropical Forest Soil	FWLYMGSFGIGLGAVAIAFTFRPPRRQPAVLPSPSLAT*
Ga0126376_122839872	3300010359	Tropical Forest Soil	LYMGSFGIGLGAVAIELTFRPPRRLPAALPSPSVAG*
Ga0126376_130273031	3300010359	Tropical Forest Soil	IGACAIGLGAVAIALMFRPPRSIPAALPAPSVAH*
Ga0126372_121588482	3300010360	Tropical Forest Soil	FGSYFWLFIGSAGIGLGAAAIAFTFRAPRQVPAGIPTASLAH*
Ga0126372_132194381	3300010360	Tropical Forest Soil	YDMFGSYFWLYMGSLGIGLGAVAIALTFDPPRAQPVARPSLAH*
Ga0126378_132801581	3300010361	Tropical Forest Soil	GSFGIGLGAFAIALTFRPPREFSIPLPGPGIVQRA*
Ga0126377_115816842	3300010362	Tropical Forest Soil	YMGSFGIGLGAVAIAFTFRPPPRRLAAALPSPSIAG*
Ga0126377_129030441	3300010362	Tropical Forest Soil	WLYLGSFGIGLGAVAIAFTFRPPRRALAALPTPSPAV*
Ga0126379_138715092	3300010366	Tropical Forest Soil	DTFGSYFWLFIGSAGIGLGAAAIAFTFRAPRPAPAGIPTASLAH*
Ga0134125_128820692	3300010371	Terrestrial Soil	SGSYFWLFIGSAAIGLGAVAIALTFRPPRTIPAALPSPLAAG*
Ga0134128_121501031	3300010373	Terrestrial Soil	YFWMYIGSFGIGLGAVAIAFTFRPPERQQVALAMA*
Ga0126381_1010587593	3300010376	Tropical Forest Soil	FWLFIGSAGIGLGAAAIAFTFRAPRQVPAGIPTASLAH*
Ga0126381_1020441211	3300010376	Tropical Forest Soil	SYFWMYVGSFGIGLGAVAIAVTFRPPQRQAVALAVA*
Ga0126381_1029128831	3300010376	Tropical Forest Soil	LYIGSFGIGLGAVAIALTFRPPRQVSFELPGRGVTQSA*
Ga0136847_135979963	3300010391	Freshwater Sediment	FWLYMGSFGIGLGAVAIAFTFRAPSRLPAALASPSAAH*
Ga0126383_118378761	3300010398	Tropical Forest Soil	LYIGSFGIGLGAVAIALTFRPPREFSIPLPGPGIVQRA*
Ga0126383_122299841	3300010398	Tropical Forest Soil	IGSFGIGLGAVAIALTFRPPREVLVGLPSPRITQSA*
Ga0134127_127700761	3300010399	Terrestrial Soil	SYLWLFVGSSAIGVGAIAIAVTFRPPRRLLAALPSYTPAG*
Ga0134122_133942822	3300010400	Terrestrial Soil	WLFIGSFAIGLGAVAIALTFRPPRTAAAVLPSPVAAG*
Ga0134121_128315602	3300010401	Terrestrial Soil	WLFVASAGIGLGAVAIASAFRPPRTLPAGLPSPSAAR*
Ga0137391_106348592	3300011270	Vadose Zone Soil	WLFMGSFGIGLGAVAIAFTFRPPRVLAVAQPRPSLAH*
Ga0137342_10442011	3300012171	Soil	MGSFGIGLGAVAIAATFHPPGRAPAAVPVPTPAH*
Ga0137363_113414722	3300012202	Vadose Zone Soil	WLYIGSFGIGLGAVPIALTFRPPREVSVFPPSPTVPQRP*
Ga0137362_100230731	3300012205	Vadose Zone Soil	SYFWLFMGSFGIGLGAVAIAFTFRPPRALALAQPRPSLAH*
Ga0137362_104051961	3300012205	Vadose Zone Soil	LYIGSFGIGLGAVAIALTFRPPRELSVGLPGASVTQSA*
Ga0137362_108589421	3300012205	Vadose Zone Soil	FWLYIGSFGIGLGAVAIALTFRPPRELPVALPSPSVAQSA*
Ga0137376_104935713	3300012208	Vadose Zone Soil	WLYIGSFAIGLGAVAIAITFRPPRREPAAMPAPSLAH*
Ga0137369_101574891	3300012355	Vadose Zone Soil	FWLYIGSCGIGLGAVAIACTIRPPSDVPAALLSPSRAA*
Ga0137360_100130539	3300012361	Vadose Zone Soil	YFWLFMGSFGIGLGAVAIAFTFRPPRGLLVAQPRPSLAH*
Ga0137361_100642904	3300012362	Vadose Zone Soil	SGSYAWLFIASSGIGAGAVAISLTFRPPRPAPVVLATPSPAH*
Ga0137361_101620961	3300012362	Vadose Zone Soil	LGSYFWLYMGSFGIGLGAVAIAFTFRPPQLLPAAVPSPIAAG*
Ga0137361_103523252	3300012362	Vadose Zone Soil	WLFIGSAGIGLGAVAIALTFRPPRHLSPALPSPSLAH*
Ga0134048_13702314	3300012400	Grasslands Soil	LFIGSAGIGLGAVAIALTFKAPRPLGAALPSPSVS*
Ga0137358_102863311	3300012582	Vadose Zone Soil	VWLFTGSAGIGLGAVAITFTFRAPRQLPAALPSPSVS*
Ga0137413_108527832	3300012924	Vadose Zone Soil	YSNYFWLYSGSFGIGLGAVAIALTFRPPREVSVFPPSPTVPQRA*
Ga0137416_104214822	3300012927	Vadose Zone Soil	FIGSAGIGLGAVAIALSFRPPRHLSPTLPSPSLAH*
Ga0137407_119751242	3300012930	Vadose Zone Soil	YMGSFGIGLGAVAIAFTFRPPRQMPVALPVPSAAS*
Ga0137410_105616901	3300012944	Vadose Zone Soil	LGSYFWLYMGSFGIGLGAVAIAFTFRPPRRLPVAVPSAVAAG*
Ga0134076_105565022	3300012976	Grasslands Soil	SYFWLFVGSFGIGLGAVAIAFTFRPPAEALAALGRAEAATSA*
Ga0163162_107925201	3300013306	Switchgrass Rhizosphere	SGSYAWLFIGSAAIGLGAVAIAFTFRPPRSLSAALPSPSVAH*
Ga0137418_101704942	3300015241	Vadose Zone Soil	FWLYMGSFGIGLGAVAIAFTFRPPQPLPAAVPSPIAAG*
Ga0137418_104736191	3300015241	Vadose Zone Soil	YDVFGSYVWLFIGSAGIGLGAVAIALTFKAPRQLGAALPSPSVS*
Ga0182033_110039052	3300016319	Soil	YIGSFGIGLGAVAIALTFRPPREISAGLQSASVAQSA
Ga0182034_110929021	3300016371	Soil	WLFIGSFGIGLGAVAIALTFRPPRQVSFELPGRGVTQSA
Ga0182039_104222262	3300016422	Soil	YVGSFGIGLAAVAIALTFRPPREISAGLQSASVAQSA
Ga0134112_100030346	3300017656	Grasslands Soil	FWLFLGSFGIGLGAVAIAVTFRPPHAVVAALPTPGVAR
Ga0134112_101136283	3300017656	Grasslands Soil	GSYFWLYMGSFGIGLGAVAIAFTFRPPRRLPAALPSPVVAG
Ga0184634_104900552	3300018031	Groundwater Sediment	YFWLFIGSFGIGLGAVAIAAAFRPPGRVPVAMPSPTLAH
Ga0184641_10019072	3300019254	Groundwater Sediment	YFWLYMGSFGIGLGAVAIAVTFRPPRPVMSALPRPVAAI
Ga0173479_101520091	3300019362	Soil	LFIGSAAIGLGAVAIAFTFRPPRSLPAALPSPSVAH
Ga0193755_11785492	3300020004	Soil	GSYAWLFIGSFGIGLGAVAIAFAFRPPAPFRVAVPSVAH
Ga0193717_11875912	3300020060	Soil	FIGSSAIGLGAVAIAFTFRPPRSLSAALPSPSVAH
Ga0210403_105945223	3300020580	Soil	GSYFWLYIGSFGIGLGAVAIAFTFRPPREVSVGLPIPQRA
Ga0210378_100701683	3300021073	Groundwater Sediment	SYFWLFIASSGIGLGAVAIAFTFRPPRSLPAALPTPSVAA
Ga0210382_105057572	3300021080	Groundwater Sediment	DAFGSYFWLFIASCGIGVGAVAIAFTFRPPHSLPAALPAPSVAR
Ga0210404_108869652	3300021088	Soil	FIGSCGIGLGAVAIAITFRPPGLAPAAMPSPSLAAGG
Ga0213882_100271183	3300021362	Exposed Rock	FWLYIGSFGIGLGAVAIALTFRPPRELSIALPSARVTQSA
Ga0213874_103251041	3300021377	Plant Roots	YGWLYIGSFGIGLAAVLIALTFKPAVRLPRPAAMVPAE
Ga0210389_104154782	3300021404	Soil	SYFWLYIGSFGIGLGAVAIALTFRPPREVSVVLPGPSVTQRA
Ga0210383_113872662	3300021407	Soil	FGSYFWMYIGSFGIGLGAVAIAITFRPPERQPVAALSLQEA
Ga0210384_103766691	3300021432	Soil	YFWLYIGSFGIGLGAVAIAFTFRPPREVSVGLPIPQRA
Ga0210384_110217042	3300021432	Soil	YIGSFGIGLGAVAIAFTFRPPRELSLGLPSSGVTQRA
Ga0210391_105971121	3300021433	Soil	GSYFWMYIGSFGIGLGAVAIAITFRPPERQPVAALSLQEA
Ga0210390_115159412	3300021474	Soil	YFWLYIGSFGIGLGAVAIALTFRPPREVSVVLPGPSVTQRA
Ga0126371_118712521	3300021560	Tropical Forest Soil	GSYFWLYIGSFGIGLGAVAIAFTFRPPREVALGVPNPGVVQSA
Ga0242670_10391121	3300022708	Soil	QLSLALYGSFGIGLGAVAIALTFRPPREISLALPIASVTQRA
Ga0210132_10221263	3300025538	Natural And Restored Wetlands	YFWLYMGSFGIGLGAVAIAVTFRAPRRLPAALAAPSLAR
Ga0207700_105693821	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	SYFWLYIGSFGIALGAVAIAFTFRPPNRVQVAMPAASLA
Ga0207706_108456293	3300025933	Corn Rhizosphere	YAWLFIGSAAIGLGAVAIAFTFRPPRSLPAALPSPSVAH
Ga0207661_112130672	3300025944	Corn Rhizosphere	SYFWLYIASCGIGLSAVAIAFTFRPPQPRREFAVAVA
Ga0207712_114435591	3300025961	Switchgrass Rhizosphere	FGSYFWMYMGSAGIGLGAVAIAFTFRPPERQPVALAAAGVA
Ga0207668_116890521	3300025972	Switchgrass Rhizosphere	GSYGWLYIGSSAIGLGAVAIAFTFRPPRPLSAGLPSPSVAH
Ga0207703_119372881	3300026035	Switchgrass Rhizosphere	SWLFLASFGIGLGAVAIAATFRAPRAMPAGLPSPGLAH
Ga0207648_113803732	3300026089	Miscanthus Rhizosphere	MFIGSSAIGLGAVAIALTFRPPQLVAAALPSPSAAR
Ga0209234_11272583	3300026295	Grasslands Soil	FLGSFGIGLGAVAIAFTFRAPRTRAAALPIPSVAH
Ga0209471_12403533	3300026318	Soil	FGSYVWLFIGSAGIGLGAVGIALTFRPPRQLSAALPTPLAVH
Ga0209131_10167745	3300026320	Grasslands Soil	AWMFIGSSAIGLGAVAIALTFRPPQLVGAALPSPSAAH
Ga0209687_12637461	3300026322	Soil	GGYFWLFLGSFGIGLGAVAIAFTFRVPQSVPAALPSPSAAR
Ga0209801_13658822	3300026326	Soil	WLYIGSFGIGLGAVAIAITFRPPRREPAAMPAPSLAH
Ga0209266_11911171	3300026327	Soil	GSYFWLYMGSFGIGLGAVAIALTFRPPRPLPAAVPSPVAAG
Ga0209473_10510984	3300026330	Soil	WLFLGSFGIGLGAVAIAATFRAPRRLPATLAMPVVAR
Ga0257167_10188483	3300026376	Soil	YMGSFGIGLGAVAIAFTFRPPRQLPAALPVPSAAH
Ga0209806_10458891	3300026529	Soil	YMGSFGIGLGAVAIALTFRPPRPLPAAVPSPVAAG
Ga0209806_11042834	3300026529	Soil	FWLYIGSFAIGLGAVAIAITFRPPRRETAAMPAPSLAH
Ga0209058_12215631	3300026536	Soil	WLFIASCGIGLGAVAIAFTFRPLRSLPAALPTPSAAH
Ga0209056_104400574	3300026538	Soil	FVGSFGIGLGAVAIAATFRAPRPLLAAAVPSPSIS
Ga0209577_100267741	3300026552	Soil	FIGSFGIGLGAAAVAVTFRPPCRLPATLPTPILAR
Ga0209524_11184281	3300027521	Forest Soil	WLYIGSFGIGLGAVAIALTFRPPRELSVGLPGPSVAQSV
Ga0209388_10728143	3300027655	Vadose Zone Soil	YFWLYMGSFGIGLGAVAIAFTFRPPRQLPAALPVPSAAH
Ga0209588_10513791	3300027671	Vadose Zone Soil	FIGSAGIGLGAVAIALSFRPPRHLSPTLPSPSLAH
Ga0209966_11474621	3300027695	Arabidopsis Thaliana Rhizosphere	LFAGSAGIGLGAVAIAATFRPPQPVQVPLPTPSLAG
Ga0209701_103732492	3300027862	Vadose Zone Soil	FWLFIGSFGIGLGAVAIAFTFRPPRQLPAGLPTPIVVH
Ga0209481_104611951	3300027880	Populus Rhizosphere	SYFWLFAGSAGIGLGAVAIAATFRPPQPVQVPLPTPSLAG
Ga0209590_105796341	3300027882	Vadose Zone Soil	AWGSYFWLYMGSFGIGLGAVAIAFTFRPPRQVPMALPSPSVAH
Ga0247826_107781313	3300030336	Soil	YSWLFVGSFGIGLGAVAIAFAFRPPAPFRVAVPSVAH
Ga0265461_132354381	3300030743	Soil	YIGSFGIGLGAVVIAFTFRPPRESSVALPSPAITQSA
Ga0318534_106510801	3300031544	Soil	FWLYIGSFGIGLGAVAIAFAFRPSREFSLALPSSSLIQGA
Ga0310686_1095519744	3300031708	Soil	YIGSFGIGLGAVVITFTFRPPRESSVALPSPAITQSA
Ga0307469_100232211	3300031720	Hardwood Forest Soil	LYMGSFGIGLGAVAIAFTFRPPRRVPAGLPAPSLAH
Ga0307469_103020483	3300031720	Hardwood Forest Soil	GSYFWLYMGSFGIGLGAVAIAFTFRPPRQIPAAVPSPIAAG
Ga0307468_1011297762	3300031740	Hardwood Forest Soil	LGGYFWLYMGSFGIGLGAVAIAFTFRPPRRLPAVLPAPSLAH
Ga0307468_1012887082	3300031740	Hardwood Forest Soil	LYMGSFGIGLGAVAIALTFRPPRAAQALVPAPSAGG
Ga0306918_113032642	3300031744	Soil	GGYFWLYMGSFGIGLGAVAIAVTFRPPRRVPGTMPAPMPAH
Ga0307477_109646632	3300031753	Hardwood Forest Soil	GSFGIGLGAVAIALTFRPPREVSVGLPGASVTQSA
Ga0307475_115583782	3300031754	Hardwood Forest Soil	SYFWLYIGSFGIGLGAVAIAFTFRPPREVSVGLPIPQRA
Ga0318554_100647423	3300031765	Soil	SYFWLYIGSFGIGLGAVAIALTFRPPREISAGLRSASVTQSA
Ga0318509_103203432	3300031768	Soil	LYIGSFGIGLGAVAIAFTFRPPREVLLGLPSPSVTQSA
Ga0307473_102278932	3300031820	Hardwood Forest Soil	GYFWLYMGSFGIGLGAVAIAFTFRPPRRQPAALPSPSLAT
Ga0310917_110207621	3300031833	Soil	DTFGSYFWRYLGSFGIGLGAVAIAFTFHPPRQLPVALAAPSVA
Ga0318511_103603532	3300031845	Soil	IGSFGIGLGAVAIALTFRPPREVLVGLPSPSVTQSA
Ga0306925_122559052	3300031890	Soil	CSYFWLYIGSFGIGLGAVAIALTFRPPREISAGLRSASVTQSA
Ga0306923_101337011	3300031910	Soil	FWLYIGSFGIGLGAVAIALTFRPPREVSAVMPSPSIA
Ga0310912_107032683	3300031941	Soil	WLYIGSFGIGLGAVAIALTFRPPREFSVVLPAPSLTSSA
Ga0310913_107605401	3300031945	Soil	GSYFWLYIGSFGIGLGAVAIAFTFRPPRELAASRTSSTVPQRA
Ga0306922_116795811	3300032001	Soil	WLYIGSFGIGLGAVAIAFTFRPPRDLSLALPVSRVTQGA
Ga0318563_103843361	3300032009	Soil	FDTFGSYFWMYVGSFGIGLGAVAIAFTSRPPERQPMALAVA
Ga0318575_101767502	3300032055	Soil	GSYFWRYLGSFGIGLGAVAIAFTFHPPRQLPVALAAPSVP
Ga0318533_100080018	3300032059	Soil	SYFWLYIGSFGIGLGAVAIAFTFRPPRELAVPLPSPSLA
Ga0306924_113671132	3300032076	Soil	IGSFGIGLGAVAIAFTFRPPRDLSLALPVSRVTQGA
Ga0318525_100701163	3300032089	Soil	DTFGSYFWLFIGSAGIGLGAVAIAFTFRAPRRVPAGLPTASLAH
Ga0307471_1020475621	3300032180	Hardwood Forest Soil	FIASCAIGLGAVAIAFTFRPPTAAPVVLPSPSPARLSG
Ga0307472_1012066101	3300032205	Hardwood Forest Soil	TSGSYAWLFIGSAAIGLGAVAIALTFRPPRSLPAALPSPSVAH
Ga0307472_1021178212	3300032205	Hardwood Forest Soil	YFWLYIGSFGIGLGAVAIALTFRPPRDLSATLPDLSVPQRA
Ga0307472_1021861602	3300032205	Hardwood Forest Soil	LFIGSCAIGLGAVAIALTFRPPRPLSVVLPEPSPAR
Ga0335084_115462641	3300033004	Soil	WLFIASSAIGLGAVAIALAFRPPQPAAAALPSPIPAS
Ga0326726_114497081	3300033433	Peat Soil	WLYMGSFGIGLGAVAIALTFRPPRAARALVPAPSAGG

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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