NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F031563

Metagenome Family F031563

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F031563
Family Type Metagenome
Number of Sequences 182
Average Sequence Length 60 residues
Representative Sequence MCGHRHHHRGFGRRGRRFPNREEWIRRLEERQRDLEQEIADLADVIKHLKSGETPEGATAL
Number of Associated Samples 154
Number of Associated Scaffolds 182

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 78.57 %
% of genes near scaffold ends (potentially truncated) 30.77 %
% of genes from short scaffolds (< 2000 bps) 89.01 %
Associated GOLD sequencing projects 146
AlphaFold2 3D model prediction Yes
3D model pTM-score0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (92.308 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(17.582 % of family members)
Environment Ontology (ENVO) Unclassified
(22.527 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(46.154 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86
1ACODB_1848130
2GPINP_01268490
34NP_01983830
4FD1_08016240
5deepsgr_03037990
6F24TB_109595372
7C688J35102_1195252182
8JGI25404J52841_100977772
9JGI25404J52841_101115422
10Ga0062593_1001159433
11Ga0062593_1006132862
12Ga0062593_1007959583
13Ga0062593_1008573853
14Ga0062593_1013844481
15Ga0062589_1004366052
16Ga0062589_1006443011
17Ga0063356_1003050423
18Ga0062595_1010809082
19Ga0062594_1013046372
20Ga0066820_10028472
21Ga0065705_100140813
22Ga0065707_106047992
23Ga0070683_1013083631
24Ga0066388_1001690033
25Ga0070689_1009704102
26Ga0070691_100779433
27Ga0070671_1002467523
28Ga0073909_101050392
29Ga0073909_102008822
30Ga0070684_1002472623
31Ga0070693_1000937313
32Ga0070704_1022576742
33Ga0068856_1006484201
34Ga0066905_1001163263
35Ga0066905_1002431023
36Ga0066905_1005824191
37Ga0066903_1001316613
38Ga0066903_1006246262
39Ga0066903_1007654041
40Ga0075286_10335512
41Ga0075289_10558371
42Ga0081455_100389924
43Ga0081455_105540502
44Ga0075367_111218172
45Ga0075427_101144971
46Ga0075422_101406941
47Ga0068871_1008062071
48Ga0075421_1002960873
49Ga0079219_100880703
50Ga0079219_107423892
51Ga0105250_102074542
52Ga0111539_102622953
53Ga0105245_104750103
54Ga0105247_103990851
55Ga0105247_106833412
56Ga0105241_102168632
57Ga0105249_101213011
58Ga0126374_109625702
59Ga0126313_100672023
60Ga0126313_102720552
61Ga0126305_111537132
62Ga0126308_100721472
63Ga0126380_102020923
64Ga0126311_103917882
65Ga0126384_101488001
66Ga0126306_115423681
67Ga0126376_117231262
68Ga0126376_118970342
69Ga0126377_102141013
70Ga0126377_105562971
71Ga0134125_101414433
72Ga0134128_117642592
73Ga0105239_102314813
74Ga0134124_105357323
75Ga0134121_128475642
76Ga0157320_10066792
77Ga0157337_10269961
78Ga0157331_10130841
79Ga0157322_10187292
80Ga0157341_10465952
81Ga0157353_10329281
82Ga0157326_10326912
83Ga0157283_102493401
84Ga0157308_100294033
85Ga0157298_102954632
86Ga0157302_104965932
87Ga0162651_1000069383
88Ga0162652_1000039532
89Ga0126375_105590562
90Ga0164303_113289242
91Ga0164301_101434513
92Ga0164302_112069432
93Ga0126369_104993993
94Ga0164309_117611732
95Ga0164305_106139831
96Ga0164305_121580131
97Ga0157374_114227992
98Ga0157374_127304882
99Ga0163162_104158563
100Ga0134081_103213322
101Ga0182008_101652332
102Ga0157376_100696282
103Ga0173483_103883041
104Ga0173480_108773362
105Ga0132258_106413233
106Ga0132256_1000221328
107Ga0132256_1013295461
108Ga0132257_1014143923
109Ga0132255_1016139563
110Ga0163161_117435601
111Ga0184624_102138561
112Ga0184640_105361152
113Ga0190265_100212075
114Ga0173481_100069095
115Ga0173481_103546632
116Ga0173479_103309181
117Ga0173479_107192971
118Ga0193713_11488192
119Ga0182009_102055343
120Ga0222621_10967322
121Ga0193698_10055383
122Ga0222622_112291772
123Ga0247686_10034343
124Ga0247693_10729301
125Ga0179589_100698992
126Ga0247681_10206163
127Ga0247681_10590992
128Ga0210142_10334091
129Ga0207692_100139553
130Ga0207688_100818883
131Ga0207688_109014022
132Ga0207699_104708031
133Ga0207707_116575021
134Ga0207695_103511594
135Ga0207663_102718853
136Ga0207663_115000492
137Ga0207662_101787431
138Ga0207649_101352242
139Ga0207661_117116052
140Ga0207667_105806922
141Ga0207651_106729392
142Ga0207712_102565391
143Ga0208776_10076711
144Ga0207702_101703101
145Ga0207702_116982851
146Ga0207648_103707373
147Ga0207675_1002565971
148Ga0207584_10041842
149Ga0207542_1043142
150Ga0209177_100910352
151Ga0209177_104689572
152Ga0209074_100043441
153Ga0209811_100103533
154Ga0209481_101579443
155Ga0209382_104517261
156Ga0247685_10107263
157Ga0247818_106502542
158Ga0247818_111251002
159Ga0307291_10042085
160Ga0307303_100455203
161Ga0307309_100182122
162Ga0307298_101066062
163Ga0307301_101905852
164Ga0307316_100208183
165Ga0307280_103772811
166Ga0307323_103878122
167Ga0247826_108139443
168Ga0268241_101363812
169Ga0307500_101993132
170Ga0307495_101365072
171Ga0307496_101155392
172Ga0307497_101540872
173Ga0310887_101677531
174Ga0307405_115069951
175Ga0310907_104634151
176Ga0308175_1007363492
177Ga0310901_101377101
178Ga0310903_107089191
179Ga0310902_105488942
180Ga0247829_112604641
181Ga0247830_104461433
182Ga0373958_0060764_443_598
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 37.08%    β-sheet: 0.00%    Coil/Unstructured: 62.92%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

51015202530354045505560MCGHRHHHRGFGRRGRRFPNREEWIRRLEERQRDLEQEIADLADVIKHLKSGETPEGATALSequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.46
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
92.3%7.7%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Natural And Restored Wetlands
Groundwater Sediment
Groundwater Sediment
Soil
Soil
Vadose Zone Soil
Terrestrial Soil
Tropical Forest Soil
Serpentine Soil
Grasslands Soil
Grass Soil
Surface Soil
Unplanted Soil
Switchgrass Rhizosphere
Soil
Agricultural Soil
Soil
Soil
Soil
Rice Paddy Soil
Soil
Tropical Forest Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Soil
Fungus Garden
Arabidopsis Rhizosphere
Corn Rhizosphere
Tabebuia Heterophylla Rhizosphere
Switchgrass Rhizosphere
Arabidopsis Thaliana Rhizosphere
Miscanthus Rhizosphere
Arabidopsis Rhizosphere
Corn, Switchgrass And Miscanthus Rhizosphere
Switchgrass Rhizosphere
Populus Endosphere
Miscanthus Rhizosphere
Populus Rhizosphere
Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Rhizosphere
Miscanthus Rhizosphere
Rhizosphere Soil
Switchgrass Rhizosphere
Corn Rhizosphere
Arabidopsis Rhizosphere
Switchgrass, Maize And Mischanthus Litter
17.6%4.9%3.3%6.0%6.0%3.8%3.8%3.3%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
ACODB_18481302040502000Fungus GardenGHRHHHRGHGRRGRRFPNREEWIRRLEERQRDLEQEIADLADVIKHLKSGETPEGATAL
GPINP_012684902065487018SoilMCGHRHHRHGFGRRGRRFPNREEWIERLEERQRDLEQEIADLADVIKHLKSGDTPAGATA
4NP_019838302170459021Switchgrass, Maize And Mischanthus LitterRPLRGKEVNMCGHRHHHRGLGRRGRRFPNREEWIRRLEERQRDLEQEIADLADVIKHLKSGETPEGATAL
FD1_080162402170459024Grass SoilSMHGYRHRHHGFGRRHRRFPNREEWLQRLEEYQRDLEQEIADVADVIKNLKSSDTPEGTTAV
deepsgr_030379902199352025SoilMCGDRHHRRGYGRRGRRFPNREEWIQRLEERQRDLEEEIADLADVIKHLKSGETPAGATA
F24TB_1095953723300000550SoilMCGHRHHRRGFGRRGRRFPNREEWIRRLEERQRDLEQEVADLADVIKHLKAGETPEGTTAL*
C688J35102_11952521823300002568SoilMCGHRHHRHGFGRRGRRFPNREEWIQRLEERQRDLEQEIADLADVIKHLKSGESPAGTTAL*
JGI25404J52841_1009777723300003659Tabebuia Heterophylla RhizosphereMCGHKHHHRGFGRRGRRFPNREEWIRRLEERQRDLEQEIADLSDVIKHLKAGDTPEGATAL*
JGI25404J52841_1011154223300003659Tabebuia Heterophylla RhizosphereMCGHRHHHRGHGRRGRRFPNREEWIRRLEERQRDLEQEIADLADVIKHLKSGDTPEGATAL*
Ga0062593_10011594333300004114SoilMCGHRHHHRGFGRRGRRFPNRKDWIRRLEERQRDLEQEIADLADVIKHLKSGETPEGAIAL*
Ga0062593_10061328623300004114SoilMHGYRHRHHGFGRRHRRFPNREEWLQRLEEYQRDLEQEIADVADVIKHLKSSETPEGTTTV*
Ga0062593_10079595833300004114SoilMCGRRHHRGHGRGGRRFPNREEWIRRLEERQRDLEQEIADLADVIKHLKDGEAQPAGTV*
Ga0062593_10085738533300004114SoilMCGHRHHHRGLGRRGRRFPNREEWIRRLEERQRDLEQEIADLADVIKHLKSGE
Ga0062593_10138444813300004114SoilEVNMCGRRHHHRGLGRRGRRFPNREEWIRSLEERQRDLEQEIADLADVIKHLKDGEAQPAGTI*
Ga0062589_10043660523300004156SoilMHGYRHRHHGFGRRHRRFPNREEWLQRLEEYQRDLEQEIADVADVIKHLKSSETPEGTTAV*
Ga0062589_10064430113300004156SoilMCGHRHHRHGRRGRRFPNREEWIQRLEERQRDLEQEIADLADVIKHLKSGETPAGTTAL*
Ga0063356_10030504233300004463Arabidopsis Thaliana RhizosphereMCGHRHHHRGLGRRGRRFPNREEWIRRLEERQRDLEQEIADLADVIKHLKSGETPEGATAL*
Ga0062595_10108090823300004479SoilMCGHRHHRGFGRRGRRFPNREEWIRRLEERQRDLEQEIADLADVIKHLKSGETPEGATAM
Ga0062594_10130463723300005093SoilMCGRRHHGHGHGRRGRRFPNREEWIQRLEERQRDLEQEIADLADVIEHLKSGDTPAGATAL*
Ga0066820_100284723300005160SoilMHGHRHHHRGFGRRRRPFPNREEWLRRLEEHQRDLEQELADVADVIRHLKTDAPEGTATV
Ga0065705_1001408133300005294Switchgrass RhizosphereMCGHRHHRHGFGRRGRRFPNREEWIERLEERQRDLEQEIADLADVIKHLKSGETPAGTTSL*
Ga0065707_1060479923300005295Switchgrass RhizosphereMCGHRHHRHGFGRRGRRFPNREEWIERLEERQRDLEQEIADLADVIKHLKSGEAPAGTTSL*
Ga0070683_10130836313300005329Corn RhizosphereMHGHRHRHRGFGRRRPFPNREEWLRRLEEHQRDLEQELADVADVIRHLKSDAPEGATTV*
Ga0066388_10016900333300005332Tropical Forest SoilMCGHRHHHRGFGRRGRRFPNREEWIRRLEERQRDLEQEIADLADVIKHLKAGETPEGTTAL*
Ga0070689_10097041023300005340Switchgrass RhizosphereMHGHRHHHRGFGRRRRPFPNREEWLRRLEEHQRDLEQELADVADVIRHLKTDAPERTATV
Ga0070691_1007794333300005341Corn, Switchgrass And Miscanthus RhizosphereMCGHRHHHRGSGRGGRRFPNREEWIRRLEERQRDLEQEIADLADVIKHLKSGETPEGATAL*
Ga0070671_10024675233300005355Switchgrass RhizosphereMHGHRHHHRGFGRRRRPFPNREEWLRRLEEHQRDLEQELADVADVIRHLKTDAPEGTTTV
Ga0073909_1010503923300005526Surface SoilMCGHRHHRHGHGRRGRRFPNREEWIERLEERQRDLEQEIADLADVIKHLKSGDTPAGATAL*
Ga0073909_1020088223300005526Surface SoilMCGDRHHRRGFGRRGRRFPNREEWIQRLEERQRDLEEEIADLADVIKHLKSGETPAGATAL*
Ga0070684_10024726233300005535Corn RhizosphereMHGHRHHHRGFGRRRRPFPNREEWLRRLEEHQRDLEQELADVADVIRHLKSDAPEGTTTV
Ga0070693_10009373133300005547Corn, Switchgrass And Miscanthus RhizosphereHHGFGRRHRRFPNREEWLQRLEEYQRDLEQEIADVADVIKHLKSSETPEGTTAV*
Ga0070704_10225767423300005549Corn, Switchgrass And Miscanthus RhizosphereMCGRRHHGHGHGRRGRRFPNREEWIQRLEERQRDLEQEIADLADVIEHLKSGETPAGATAL*
Ga0068856_10064842013300005614Corn RhizosphereMCGRRHHRHGHGRRGGRFPNREEWLRRLEERQRDLEQEIADLADVIKHLKDGEAQPAGTV
Ga0066905_10011632633300005713Tropical Forest SoilMCGQRHHHRGHGRRGRRFPNREEWIRRLEERQRDLEQEIADLADVIKHLKAGETPEGATAL*
Ga0066905_10024310233300005713Tropical Forest SoilMCGHRHHHRGHGRRGRRFPNREEWIRRLEERQRDLEQEVADLADVIKHLKAGDTPEGATAL*
Ga0066905_10058241913300005713Tropical Forest SoilGRRGRRFPNREEWIRRLEERQRDLEQEIADLADVIKHLKAGDTPEGATAL*
Ga0066903_10013166133300005764Tropical Forest SoilMHGHRHRHRGFGRGHRRFPNREEWLRRLEEYQRDLEQEIADVADVIKHLKSSETPEGTTAV*
Ga0066903_10062462623300005764Tropical Forest SoilMHGYRHRHHGFGRRHRRFPNREEWLQRLEEYQRDLEQEIADVADVIKHLRSSETPEGTTAV*
Ga0066903_10076540413300005764Tropical Forest SoilMCGHRHHHRGHGRRGRRFPNREEWIRRLEERQRDLEQEVADLADVIKHLKAGDT
Ga0075286_103355123300005886Rice Paddy SoilMCGARHHRRGHGRRGRRFPNREEWVQRLEERQRDLEQEIADLADVIKHLKSGETPAGATAL*
Ga0075289_105583713300005888Rice Paddy SoilMCGGRHHRRGFGRRGRRFPNREEWVQQLEERQRDLEQEIADLADVIKHLKSGET
Ga0081455_1003899243300005937Tabebuia Heterophylla RhizosphereMCGHRHHHRGFGRRGRRFPNREEWIRRLEERQRDLEQEVADLADVIKHLKAGDTPEGATAL*
Ga0081455_1055405023300005937Tabebuia Heterophylla RhizosphereRHHHGGFGRRHRRFPSREEWLRRLEEYQRDLEQEVADVADVIRHLKSEQPEGTSTV*
Ga0075367_1112181723300006178Populus EndosphereMCGHRHHHRGLGRRGRRFPNREEWIRRLEERQRDLEQEIADLADVIKHLKSGETPDF
Ga0075427_1011449713300006194Populus RhizosphereRGEVNMCGHRHHRHGFGRRGRRFPNREEWIQRLEERQRDLEQEIADLADVIKHLKSGETPEGATAL*
Ga0075422_1014069413300006196Populus RhizosphereHRGLGRRGRRFPNREEWIRRLEERQRDLEQEIADLADVIKHLKSGETPEGATAL*
Ga0068871_10080620713300006358Miscanthus RhizosphereMHGHRHRHRGFGRRRPFPNREEWLRRLEEHQRDLEQELADVADVIRHLKTDAPEGTATV*
Ga0075421_10029608733300006845Populus RhizosphereMCGHRHHRHGFGRRGRRFPNREEWIQRLEERQRDLEQEIADLADVIKHLKSGETPAGTTAL*
Ga0079219_1008807033300006954Agricultural SoilMHGHRDHHRGFGRRRRPFPNREEWLRRLEEHQRDLEQELADVADVIRHLKSDAPEGATTV
Ga0079219_1074238923300006954Agricultural SoilMHGHRHRHHRRGFGRGFRRFPNREEWLRRLEEYQRDLEQEIADVADVIKHLRTPETPEGTTAV*
Ga0105250_1020745423300009092Switchgrass RhizosphereVNMHGHRHHHRGFGRRRRPFPNREEWLRRLEEHQRDLEQELADVADVIRHLKTDAPEGTATV*
Ga0111539_1026229533300009094Populus RhizosphereLGRRGRRFPNREEWIRRLEERQRDLEQEIADLADVIKHLKSGETPEGATAL*
Ga0105245_1047501033300009098Miscanthus RhizosphereVNMHGHRHRHRGFGRRRPFPNREEWLRRLEEHQRDLEQELADVADVIRHLKSDAPEGATTV*
Ga0105247_1039908513300009101Switchgrass RhizosphereVNMHGHRHHHRGFGRRRRPFPNREEWLRRLEEHQRDLEQELADVADVIRHLKTDAPEGTTTV*
Ga0105247_1068334123300009101Switchgrass RhizosphereMNRANESEKEVNMCGRRHHGHGHGRRGRRFPNREEWIQRLEERQRDLEQEIADLADVIKHLKSGDTPAGATAL*
Ga0105241_1021686323300009174Corn RhizosphereVNMHGHRHHHRGFGRRRRPFPNREEWLRRLEEHQRDLEQELADVADVIRHLKSDAPEGATTV*
Ga0105249_1012130113300009553Switchgrass RhizosphereVNMCGHRHYHRGSGRGGRRFPNREEWIRRLEERQRDLEQEIADLADVIKH
Ga0126374_1096257023300009792Tropical Forest SoilVNMHGYRHRHHGFGRRHRRFPNREEWLQRLEEYQRDLEQEIADVADVIKHLRSSETPEGTTAV*
Ga0126313_1006720233300009840Serpentine SoilVNMCGHRHHRRGFGRRRFPDREEWIRRLEERQRDLEQEIADLADVIKHLKAGQTPEGTTAL*
Ga0126313_1027205523300009840Serpentine SoilMCGHRHHRRGRRRFPNREEWIRRLEDRQRDLEQEIADLADVIKHLKAGQTPEGTTAL*
Ga0126305_1115371323300010036Serpentine SoilMCGHRHHRRGRRHFPNREEWIRRLEERQRDLEQEIADLADVIKHLRAGQTPEGTTAL*
Ga0126308_1007214723300010040Serpentine SoilMCGHSHHRRGRRRFPNREEWIRRLEDRQRDLEQEIADLADVIRHLKAGRTPEGTTAF*
Ga0126380_1020209233300010043Tropical Forest SoilDRRVSSEIRRGEVNMHGYRHRHHGFGRRHRRFPNREEWLQRLEEYQRDLEQEIADVADVIKHLRSSETPEGTTAV*
Ga0126311_1039178823300010045Serpentine SoilMCGHRHHRRGRRRFPNREEWIRRLEDRQRDLEQEIADLADVIRHLKAGRTPEGTTAF*
Ga0126384_1014880013300010046Tropical Forest SoilSSWSATRKGGEHMHGHRHRHRGFGRGHRRFPNREEWLRRLEEYQRDLEQEIADVADVIKHLKSSETPEGTTAV*
Ga0126306_1154236813300010166Serpentine SoilGHRHHRRGRRHFPNREEWIRRLEERQRDLEQEIADLADVIKHLKAGQTPEGTTAL*
Ga0126376_1172312623300010359Tropical Forest SoilMHGHRHRHRGFGHGHRRFPNREEWLRRLEEYQRDLEQEIADVADVIKHLKSSETPEGTTAV*
Ga0126376_1189703423300010359Tropical Forest SoilMCGHRHHHRGHGRRGRRFPNREEWIRRLEERQRDLEQEIADLADVIKHLKSGETPEGATAL*
Ga0126377_1021410133300010362Tropical Forest SoilMCGHRHHHRGHGRRGRRFPNREEWIRRLEERQRDLEQEIADLADVIKHLKSGE
Ga0126377_1055629713300010362Tropical Forest SoilVNMCGHRHHHRGFGRRGRRFPNREEWIRRLEERQRDLEQEIADLADVIKHLKAGDTPEGATAL*
Ga0134125_1014144333300010371Terrestrial SoilVNMHGYRHRHHGFGRRHRRFPNREEWLQRLEEYQRDLEQEIADVADVIKHLKSSETPEGTTAV*
Ga0134128_1176425923300010373Terrestrial SoilMCGRRHHHRGLGRRGGRFPNREEWIRSLEERQRDLEQEIADLADVIKHLKNGEAQPAGTV
Ga0105239_1023148133300010375Corn RhizosphereVNMCGHRHYHRGSGRGGRRFPNREEWIRRLEERQRDLEQEIADLADVIKHLKSGETPEGATAL*
Ga0134124_1053573233300010397Terrestrial SoilRRREVNMHGHRHRHRGFGRRRPFPNREEWLRRLEEHQRDLEQELADVADVIRHLKSDAPEGATTV*
Ga0134121_1284756423300010401Terrestrial SoilVNMHGYRHRHHGFGRRHRRFPNREEWLQRLEEYQRDLEQEIADVADVIKHLQSSETPEGTTAV*
Ga0157320_100667923300012481Arabidopsis RhizosphereMCGQGHHHRGFGRRGRRFPNREEWIRRLEERQRDLEQEVADLADVIRHLKSGDIPEGTTAM*
Ga0157337_102699613300012483Arabidopsis RhizosphereDRRLSREIRRKEVNMHGYRHRHHGFGRRHRRFPNREEWLQRLEEYQRDLEQEIADVADVIKHLKSSETPEGTTAV*
Ga0157331_101308413300012486SoilVNMCGHRHHRGGFGRRGRRFPNREEWIRRLEERQRDLEQEIADLADVIKHLKAGETPEGATAL*
Ga0157322_101872923300012490Arabidopsis RhizosphereMCGHRHHHRGFGRRGRRFPNREEWIRRLEERQRDLEQEIADLADVIKHLKSGETPEGATAL*
Ga0157341_104659523300012494Arabidopsis RhizosphereMCGHRHHHRGFGRRGRRFPNREEWIRRLEERQRDLEQEVADLADVIKHLK
Ga0157353_103292813300012496Unplanted SoilMCGQGHHHRGFGRRGRRFPNREEWIRRLEERQRDLEQEVADLADVIRHLKSVDIPEGTTAM*
Ga0157326_103269123300012513Arabidopsis RhizosphereVNMCGHRHHHRGFGWRGRRFPNREEWIRRLEERQRDLEQEVADLADVIKHLKTGETPEGTTAM*
Ga0157283_1024934013300012907SoilHHRRGHGRRGRRFPNREEWIERLEERQRDLEQEIADLADVIKHLKDGEAQPAGTI*
Ga0157308_1002940333300012910SoilVNMCGHRHHRHGRRGRRFPNREEWIQRLEERQRDLEQEIADLADVIKHLKSGETPAGTTAL*
Ga0157298_1029546323300012913SoilVKMCGHRHHRHGRRGRRFPNREEWIQRLEERQRDLEQEIADLADVIKHLKSGDTPAGATAL*
Ga0157302_1049659323300012915SoilMCGHRHHRHGFGRRGRRFPNREEWIERLEERQRDLEQEIADLADVIKHLKSGETPEGATAL*
Ga0162651_10000693833300012938SoilMCGHRHHRYGRGRHRFPNREEWIRRLEERQRDLEQEIADLADVIKHLKSDQAPEGTTAM*
Ga0162652_10000395323300012941SoilVNMCGHRHHRYGRGRHRFPNREEWIRRLEERQRDLEQEIADLADVIKHLKSDQAPEGTTAM*
Ga0126375_1055905623300012948Tropical Forest SoilVNMCGHRHHHRGHGRRGRRFPNREEWIRRLEERQRDLEQEVADLADVIKHLKAGDTPEGATAL*
Ga0164303_1132892423300012957SoilMCGHRHHRHGHGRRGRRFPNREEWIERLEERQRDLEQEIADLADVIKHLKSGETPAGATAL*
Ga0164301_1014345133300012960SoilVNMCGHRHHRHGHGRRGRRFPNREEWIERLEERQRDLEQEILDLADVIKHLKSGDTPAGATAL*
Ga0164302_1120694323300012961SoilVNMCGDRHHRRGFGRRGRRFPNREEWVQRLEERQRDLEQEIADLADVIKHLKSGETPAGATAL*
Ga0126369_1049939933300012971Tropical Forest SoilGEVNMHGYRHRHHGFGRRHRRFPNREEWLQRLEEYQRDLEQEIADVADVIKHLKSSETPEGTTAV*
Ga0164309_1176117323300012984SoilVNMCGRRHHRHGLGRRGGRFPNREEWLRRLEERQRDLEQEIADLADVIKHLKDGEAQPAGTV*
Ga0164305_1061398313300012989SoilMHGYRHRHHGFGRRHRRFPNREEWLQRLEEYQRDLEQEIADVADVIKHLKSSET
Ga0164305_1215801313300012989SoilVNMHGHRHHHRGFSRRRRPFPNREEWLRRLEEHQRDLEQELADVADVIRHLKTDAPEGTATV*
Ga0157374_1142279923300013296Miscanthus RhizosphereVTNRANESEKEVNMCGRRHHGHGHGRRGRRFPNREEWIQRLEERQRDLEQEIADLADVIEHLKSGDTPAGATAL*
Ga0157374_1273048823300013296Miscanthus RhizosphereMCGHRHYHRGSGRGGRRFPNREEWIRRLEERQRDLEQEIADLADGIKHLKSGETPEGATAL*
Ga0163162_1041585633300013306Switchgrass RhizosphereAGGDRNVSRPLRGKEVNMCGHRHHHRGSGRGGRRFPNREEWIRRLEERQRDLEQEIADLADVIKHLKSGETPEGATAL*
Ga0134081_1032133223300014150Grasslands SoilMCGPRHHRHGRGRRGRRFPNREQWIQRLEERQRDLEQEIADLADVIEHLKSGDTPAGATAL*
Ga0182008_1016523323300014497RhizosphereMHGHRHHHRGFGRRRRPFPNREEWLRRLEEHQRDLEQELADVADLIRHLKTDAPEGTTTV
Ga0157376_1006962823300014969Miscanthus RhizosphereVNMHGYRHRNHGFGRRHRRFPNREEWLQRLEEYQRDLEQEIADVADVIKHLKSSETPEGTTAV*
Ga0173483_1038830413300015077SoilMCGHRHHHRGFGRRGRRFPNRKDWIRRLEERQRDLEQEIADLADVIKHLKSGETPAGTTAL*
Ga0173480_1087733623300015200SoilHDRKLSRALRRREVSMHGYRHRHHGFGRRHRRFPNREEWLQRLEEYQRDLEQEIADVADVIKHLKSSETPEGTTTV*
Ga0132258_1064132333300015371Arabidopsis RhizosphereVNMCGHRHHHRGFGRRGRRFPNREEWIRRLEERQRDLEQEVADLADVIKHLKTGETPEGTTAM*
Ga0132256_10002213283300015372Arabidopsis RhizosphereMCGQGHHHRGFGRRGRRFPNREEWIRRLEERQRDLEQEVADLADVIRHLKSGDSPEGTTAM*
Ga0132256_10132954613300015372Arabidopsis RhizosphereGYRHRHHGFGRRHRRFPNREEWLQRLEEYQRDLEQEIADVADVIKHLKSSETPEGTTAV*
Ga0132257_10141439233300015373Arabidopsis RhizosphereGFGRRHRRFPNREEWLQRLEEYQRDLEQEIADVADVIKHLKSSETPEGTTAV*
Ga0132255_10161395633300015374Arabidopsis RhizosphereLRREEVNMCGPRHHRHGHGRRGRRFPNREEWIQRLEERQRDLEQEIADLADVIKHLKSGDTPAGATAL*
Ga0163161_1174356013300017792Switchgrass RhizosphereMCGHRHHRHGFGRRGRRFPNREEWIERLEERQRDLEQEIADLADVIKHLKSGETPAGTTS
Ga0184624_1021385613300018073Groundwater SedimentMCGHRHHHGGLGRRGRRFPNREEWIRRLEERQRDLEQEIADLADVIKHLKSGETPEGATA
Ga0184640_1053611523300018074Groundwater SedimentMCGHRHHRGLGRRGRRFPNREEWIRRLEERQRDLEQEIADLADVIKHLKSGETPEGATAL
Ga0190265_1002120753300018422SoilMHRHHRRGARRYGHGFRGRRFPNREEWLRALEEHQRDLEQEIADVADLIRRLKDQPAETATV
Ga0173481_1000690953300019356SoilMCGHRHHHRGLGRRGRRFPNREEWIRRLEERQRDLEQEIADLADVIKHLKSGETPEGATA
Ga0173481_1035466323300019356SoilMCGHRHHHRGFGRRGRRFPNRKDWIRRLEERQRDLEQEIADLADVIKHLKSGETPEGAIA
Ga0173479_1033091813300019362SoilMCGHRHHRHGRRGRRFPNREEWIQRLEERQRDLEQEIADLADVIKHLKSGETPAGTTAL
Ga0173479_1071929713300019362SoilMCGRRHHHRGLGRRGRRFPNREEWIRSLEERQRDLEQEIADLADVIKHLKDGEAQPAGTI
Ga0193713_114881923300019882SoilMCGDRHHRRGFGRRGRRFPNREEWIQRLEERQRDLEEEIADLADVIKHLKSGETPAGATA
Ga0182009_1020553433300021445SoilMHRHHRRGFGRGHRRFPNREEWLRRLEEYQRDLEQEIADVADVIKHLKTSETPEGTTAV
Ga0222621_109673223300021510Groundwater SedimentMCGDRQHRRGFGRRGRRFPNREEWVQRLEERQRDLEQEIADLADVIRHLKSGETPAGTTA
Ga0193698_100553833300021968SoilGDRHHRRGFGRRGRRFPNREEWIQRLEERQRDLEEEIADLADVIKHLKSGETPAGATAL
Ga0222622_1122917723300022756Groundwater SedimentMCGDRHHRRGHGRRGRRFPNREEWVQRLEERQRDLEQEIADIADVIKHLKSGETPAGTTA
Ga0247686_100343433300024177SoilHGYRHRHHGFGRRHRRFPNREEWLQRLEEYQRDLEQEIADVADVIKHLKSSETPEGTTAV
Ga0247693_107293013300024181SoilYRHRHHGFGRRHRRFPNREEWLQRLEEYQRDLEQEIADVADVIKHLKSSETPEGTTAV
Ga0179589_1006989923300024288Vadose Zone SoilMCGDRHHRRGFGHRGRRFPNREEWIQRLEERQRDLEEEIADLADVIKHLKSGETPAGATA
Ga0247681_102061633300024310SoilMCGPRHHRHGHGRRGRRFPNREEWIQRLEERQRDLEQEIADLADVIKHLKSGDTPAGATA
Ga0247681_105909923300024310SoilMHRHHRRGFGRGHRRFPNREEWLRRLEEYQRDLEQEIADVADVIRHLKTSETPEGTTAV
Ga0210142_103340913300025552Natural And Restored WetlandsMRGHRRGHRRHGRCGHGRFPNREEQLRRLEEYQRDLEQEIADVADVIKHLKGEQPAETAT
Ga0207692_1001395533300025898Corn, Switchgrass And Miscanthus RhizosphereMHGYRHRHHGFGRRHRRFPNREEWLQRLEEYQRDLEQEIADVADVIKHLKSSETPDGTTA
Ga0207688_1008188833300025901Corn, Switchgrass And Miscanthus RhizosphereMHGHRHHHRGFGRRRRSFPNREEWLRRLEEHQRDLEQELADVADVIRHLKTDAPEGTATV
Ga0207688_1090140223300025901Corn, Switchgrass And Miscanthus RhizosphereRREVNMHGHRHRHRGFGRRRPFPNREEWLRRLEEHQRDLEQELADVADVIRHLKSDAPEGATTV
Ga0207699_1047080313300025906Corn, Switchgrass And Miscanthus RhizosphereMCGRRHHGHGHGRRGRRFPNREEWIQRLEERQRDLEQEIADLADVIEHLKSGDTPAGATA
Ga0207707_1165750213300025912Corn RhizosphereMHGHRHHHRGFGRRRRPFPNREEWLRRLEEHQRDLEQELADVADVIRHLKTDAPEGTAT
Ga0207695_1035115943300025913Corn RhizosphereHRHHHRGFGRRRRPFPNREEWLRRLEEHQRDLEQELADVADVIRHLKTDAPEGTATV
Ga0207663_1027188533300025916Corn, Switchgrass And Miscanthus RhizosphereMHGHRHHQRGLGRRRRPFPNREEWLRRLEEHQRDLEQELADVADVIRHLKTD
Ga0207663_1150004923300025916Corn, Switchgrass And Miscanthus RhizosphereMCGRRHHRGHGRGGRRFPNREEWIRRLEERQRDLEQEIADLADVIKHLKDGEAQPAGTV
Ga0207662_1017874313300025918Switchgrass RhizosphereMHGHRHHHRGFGRRRRPFPNREEWLRRLEEHQRDLEQELADVADVIRHLKSDAPEGATTV
Ga0207649_1013522423300025920Corn RhizosphereMHGHRHRHRGFGRRRPFPNREEWLRRLEEHQRDLEQELADVADVIRHLKSDAPEGTTTV
Ga0207661_1171160523300025944Corn RhizosphereMHGHRHHHRGFGRRRRPFPNREEWLRRLEEHQRDLEQELADVADVIRHLKSDAPEG
Ga0207667_1058069223300025949Corn RhizosphereMCGHRHHHRGSGRGGRRFPNREEWIRRLEERQRDLEQEIADLADVIKHLKSGETPEGATA
Ga0207651_1067293923300025960Switchgrass RhizosphereMHGHRHHHRGFGPRRRPFPNREEWLRRLEEHQRDLEQELADVADVIRHLKTDAPEGTATV
Ga0207712_1025653913300025961Switchgrass RhizosphereMCGHRHYHRGSGRGGRRFPNREEWIRRLEERQRDLEQEIADLADVIKHLKSGETPAGTTS
Ga0208776_100767113300026014Rice Paddy SoilMCGARHHRRGHGRRGRRFPNREEWVQRLEERQRDLEQEIADLADVIKHLKSGETPAGTTA
Ga0207702_1017031013300026078Corn RhizosphereMHRHHRRGFGRGHRRFPNREEWLRRLEEYQRDLEQEIADVADVIRHLKTSETPE
Ga0207702_1169828513300026078Corn RhizosphereREIRRKKVNMHGYRHRHHGFGRRHRRFPNREEWLQRLEEYQRDLEQEIADVADVIKHLKSSETPEGTTAV
Ga0207648_1037073733300026089Miscanthus RhizosphereHRHGFGRRGRRFPNREEWIERLEERQRDLEQEIADLADVIKHLKSGETPAGTTSL
Ga0207675_10025659713300026118Switchgrass RhizosphereMCGHRHYHRGSGRGGRRFPNREEWIRRLEERQRDLEQEIADLADVIKHLKSGETPEGATA
Ga0207584_100418423300026904SoilGRRGRRFPNREEWIRRLEERQRDLEQEIADLADVIKHLKSGETPEGATAL
Ga0207542_10431423300026939SoilMCGHRHHHRGLGRRGRRFPNREEWIRRLEERQRDLEQEIADLADVIKHLKSGETPEG
Ga0209177_1009103523300027775Agricultural SoilMHGHRHRHHRRGFGRGFRRFPNREEWLRRLEEYQRDLEQEIADVADVIKHLRTPETPEGTTAV
Ga0209177_1046895723300027775Agricultural SoilMHGHRDHHRGFGRRRRPFPNREEWLRRLEEHQRDLEQELADVADVIRHLKSDAPEGTTTV
Ga0209074_1000434413300027787Agricultural SoilVNMHGHRHRHRGFGRRRPFPNREEWLRRLEEHQRDLEQELADVADVIRHLKSDAPEGATT
Ga0209811_1001035333300027821Surface SoilMCGHRHHRHGHGRRGRRFPNREEWIERLEERQRDLEQEIADLADVIKHLKSGDTPAGATA
Ga0209481_1015794433300027880Populus RhizosphereMCGHRHHHRGLGRRGRRFPNREEWIRRLEERQRDLEQEIADLADVIKHLKS
Ga0209382_1045172613300027909Populus RhizosphereMCGHRHHRHGFGRRGRRFPNREEWIQRLEERQRDLEQEIADLADVIKHLKSGETPAGTTA
Ga0247685_101072633300028065SoilMHGYRHRHHGFGRRHRRFPNREEWLQRLEEYQRDLEQEIADVADVIKHLKSSETPEGT
Ga0247818_1065025423300028589SoilMCGHRHHRHGFGRRGRRFPNREEWIQRLEERQRDLEEEIADLADVIKHLKSGETPAGATA
Ga0247818_1112510023300028589SoilMCGHRHHHRGLGRRGRRFPNREEWIRRLEERQRDLEEEIADLADVIKHLKSGETPEGATA
Ga0307291_100420853300028707SoilMCGHRHHGHGFGRRGRRFPNREEWIQRLEERQRDLEQEIADLADVIKHLKSDAPEGTATV
Ga0307303_1004552033300028713SoilMCGHRHHGHGFGRRGRRFPNREEWIQRLEERQRDLEQEIADLADVIKHLKSGDTPAGATA
Ga0307309_1001821223300028714SoilMCGHRHHGHGFGRRGRRFPNREEWIQRLEERQRDLEQEIADLADVIKHLKSEAPEGTATV
Ga0307298_1010660623300028717SoilMCGDRQHRRGFGRRGRRFPNREEWVQRLEERQRDLEQEIADLADVIKHLKSGETPAGTTA
Ga0307301_1019058523300028719SoilMCGDRQHRRGFGRRGRRFPNREEWVQLLEERQRDLEQEIADLADVIRHLKSGETPAGTTA
Ga0307316_1002081833300028755SoilMCGHRHYGHGFGRRGRRFPNREEWIQRLEERQRDLEQEIADLADVIKHLKSEAPEGTATV
Ga0307280_1037728113300028768SoilRQHRRGFGRRGRRFPNREEWVQRLEERQRDLEQEIADLADVIRHLKSGETPAGTTAL
Ga0307323_1038781223300028787SoilMCGHRHYGHGFGRRGRRFPNREEWIQRLEERQRDLEQEIADLADVIKHLKSDAPEGTATV
Ga0247826_1081394433300030336SoilMCGHRHHGHGYGRRGRRFPNREEWIQRLEERQRDLEEEIADLADVIKH
Ga0268241_1013638123300030511SoilMCGQGHHRRGFGRRGRRFPNREEWIRRLEERQRDLEQEIADLADVIKHLKAGDTPEGATA
Ga0307500_1019931323300031198SoilMHGHRHHHRGFGRRRRPFPNREEWLRRLQEHQRDLEQELADVADVIRHLKTDAPEGTATV
Ga0307495_1013650723300031199SoilRGYGRRGRRFPNREEWIQRLEERQRDLEEEIADLADVIKHLKSGETPAGATAL
Ga0307496_1011553923300031200SoilCGDRHHRRGFGRRGRRFPNREEWIQRLEERQRDLEEEIADLADVIKHLKSGETPAGATAL
Ga0307497_1015408723300031226SoilMCGDRHHRRGSGRRGRRFPNREEWIQRLEERQRDLEEEIADLADVIKHLKSGETPAGATA
Ga0310887_1016775313300031547SoilMHGYRHRHHGFGRRHRRFPNREEWLQRLEEYQRDLEQEIADVADVIKHLKSSETP
Ga0307405_1150699513300031731RhizosphereMCGHSHHRRGRRRFPNREEWIRRLEDRQRDLEQEIADLADVIRHLKAGRTPEGTTAF
Ga0310907_1046341513300031847SoilMCGHRHHHRGSGRRGRRFPNREEWIRRLEERQRDLEQEIADLADVIKHLKSGETPEGATA
Ga0308175_10073634923300031938SoilMCGHRHHHRGRRGRRFPNRDEWIRRLEERQRDLEQEIADLADVIKHLKSGQTPEGTTAM
Ga0310901_1013771013300031940SoilGFGRRHRRFPNREEWLQRLEEYQRDLEQEIADVADVIKHLKSSETPEGTTAV
Ga0310903_1070891913300032000SoilMCGHRHHHRGSGRGGRRFPNREEWIRRLEERQRDLEQEIADLADVIKHLK
Ga0310902_1054889423300032012SoilMHGYRHRLHGFGRRHRRFPNREEWLQRLEEYQRDLEQEIADVADVIRHLKGDEPAETGTA
Ga0247829_1126046413300033550SoilMCGHRHHRHGFGRRGRRFPNREEWIERLEERQRDLEQEIADLADVIKHLKSG
Ga0247830_1044614333300033551SoilMCGHRHHRHGFGGRGRRFPNREEWIERLEERQRDLEQEIADLADVIKHLKSGETPAGTTS
Ga0373958_0060764_443_5983300034819Rhizosphere SoilLGRRGRRFPNREEWIRRLEERQRDLEQEIADLADVIKHLKSGETPEGATAL


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.