NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F031559

Metagenome / Metatranscriptome Family F031559

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F031559
Family Type Metagenome / Metatranscriptome
Number of Sequences 182
Average Sequence Length 56 residues
Representative Sequence MSDSFINRTSRVAIAGRVAERLRPQGWNELTLRGDYHTPFGKSEARAEAAKWLCVV
Number of Associated Samples 119
Number of Associated Scaffolds 182

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 79.67 %
% of genes near scaffold ends (potentially truncated) 23.63 %
% of genes from short scaffolds (< 2000 bps) 84.07 %
Associated GOLD sequencing projects 110
AlphaFold2 3D model prediction Yes
3D model pTM-score0.29

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (59.341 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere
(18.681 % of family members)
Environment Ontology (ENVO) Unclassified
(31.868 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(41.758 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84
1FACENCE_5285260
2GPICI_02926580
3FE1_06559050
4INPhiseqgaiiFebDRAFT_1016347474
5INPhiseqgaiiFebDRAFT_1016365513
6F14TC_1030058592
7AF_2010_repII_A01DRAFT_10007775
8AF_2010_repII_A01DRAFT_10430112
9AF_2010_repII_A1DRAFT_100370071
10JGI11851J11668_10027322
11AF_2010_repII_A001DRAFT_100067604
12AF_2010_repII_A10DRAFT_10086592
13AF_2010_repII_A10DRAFT_10189391
14F14TB_1017401551
15JGI25405J52794_101103022
16Ga0055472_100500232
17Ga0055436_101460191
18Ga0055433_100708672
19Ga0063356_1006188532
20Ga0062595_1003733432
21Ga0062595_1008550701
22Ga0062595_1013381202
23Ga0065704_104131432
24Ga0065705_101732563
25Ga0066388_1000735602
26Ga0066388_1002467294
27Ga0066388_1003686462
28Ga0066388_1003735852
29Ga0066388_1004710783
30Ga0066388_1011604652
31Ga0066388_1016500011
32Ga0066388_1020767352
33Ga0066388_1021327362
34Ga0066388_1028037021
35Ga0066388_1032671083
36Ga0066388_1084600931
37Ga0070675_1007400583
38Ga0070711_1005982341
39Ga0066905_1001480282
40Ga0066905_1003469982
41Ga0066905_1004123181
42Ga0066905_1004509191
43Ga0066905_1005327803
44Ga0066905_1006299712
45Ga0066905_1007141443
46Ga0066903_1032221952
47Ga0066903_1052168451
48Ga0066903_1081262422
49Ga0066903_1082316251
50Ga0081455_100029332
51Ga0081455_100235582
52Ga0081455_100239912
53Ga0081455_102497952
54Ga0081455_106463131
55Ga0081540_13216961
56Ga0075417_100007629
57Ga0075417_100017869
58Ga0075417_101487544
59Ga0075028_1006823872
60Ga0075432_100202124
61Ga0075427_100049115
62Ga0075422_100983502
63Ga0075428_1000540498
64Ga0075428_1015618241
65Ga0075430_1000816821
66Ga0075430_1004309182
67Ga0075431_1006873514
68Ga0075433_101563661
69Ga0075433_109158422
70Ga0075433_113132771
71Ga0075425_1002037192
72Ga0075425_1005231004
73Ga0075425_1006892442
74Ga0075434_1007452292
75Ga0075424_1024935922
76Ga0075436_1000934453
77Ga0075419_102392672
78Ga0075435_1002162241
79Ga0075435_1013012371
80Ga0075418_115627572
81Ga0075418_126400341
82Ga0114129_126508832
83Ga0111538_107008992
84Ga0075423_107944412
85Ga0075423_128642452
86Ga0105104_105446841
87Ga0126374_102038142
88Ga0126380_100706152
89Ga0126380_106116042
90Ga0126380_118750941
91Ga0126382_104234252
92Ga0126382_108163271
93Ga0126382_115272441
94Ga0126370_100425084
95Ga0126376_100601854
96Ga0126376_110215791
97Ga0126372_127331391
98Ga0126377_119976981
99Ga0126379_132697772
100Ga0105239_118499381
101Ga0126381_1016943601
102Ga0126381_1021917501
103Ga0134123_133110521
104Ga0124844_12977512
105Ga0162653_1000046683
106Ga0126375_102912491
107Ga0126375_113757171
108Ga0126375_114273821
109Ga0164298_100161242
110Ga0164303_112691371
111Ga0164302_101948312
112Ga0126369_109535001
113Ga0126369_126336462
114Ga0164304_101370131
115Ga0164305_114001992
116Ga0163162_125891681
117Ga0157375_126447171
118Ga0132258_108467651
119Ga0132258_109491184
120Ga0132258_120457941
121Ga0132256_1032666031
122Ga0132257_1005724853
123Ga0182040_100001464
124Ga0187773_102102511
125Ga0184611_10947071
126Ga0184635_101875072
127Ga0184635_102849181
128Ga0184625_100698392
129Ga0184625_101471732
130Ga0184625_103829332
131Ga0184644_10841381
132Ga0193705_10861852
133Ga0193722_10734932
134Ga0210381_101294711
135Ga0193719_100583564
136Ga0193719_101936012
137Ga0126371_100286176
138Ga0126371_108404773
139Ga0126371_113450671
140Ga0222624_13492761
141Ga0222624_13514651
142Ga0222625_14857012
143Ga0222623_103385872
144Ga0222622_100869831
145Ga0207663_105268593
146Ga0207712_111463842
147Ga0209814_100031605
148Ga0209814_100693443
149Ga0209481_103590302
150Ga0207428_100557013
151Ga0209382_120803952
152Ga0307295_100715681
153Ga0307282_103835471
154Ga0307302_101679021
155Ga0307312_102514013
156Ga0075394_119647872
157Ga0308190_12002671
158Ga0308193_10696721
159Ga0307498_100022586
160Ga0307498_101553972
161Ga0307498_102830092
162Ga0255310_100858702
163Ga0307495_101906322
164Ga0307497_104787231
165Ga0170824_1095171902
166Ga0170820_108422171
167Ga0170819_148310111
168Ga0318541_1000014925
169Ga0310887_111275651
170Ga0318561_100498355
171Ga0307469_113506592
172Ga0307469_115898351
173Ga0318500_101221563
174Ga0307468_1009855742
175Ga0318527_103413441
176Ga0307471_1006664272
177Ga0326726_103248701
178Ga0326726_119373662
179Ga0326723_0461214_394_564
180Ga0370545_096533_449_622
181Ga0370541_021149_14_187
182Ga0370546_031901_566_751
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 39.29%    β-sheet: 0.00%    Coil/Unstructured: 60.71%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

510152025303540455055MSDSFINRTSRVAIAGRVAERLRPQGWNELTLRGDYHTPFGKSEARAEAAKWLCVVSequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.29
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
40.7%59.3%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds



Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Freshwater Sediment
Groundwater Sediment
Natural And Restored Wetlands
Groundwater Sediment
Watersheds
Groundwater Sediment
Soil
Soil
Terrestrial Soil
Tropical Forest Soil
Grass Soil
Switchgrass Rhizosphere
Soil
Soil
Soil
Forest Soil
Soil
Hardwood Forest Soil
Soil
Tropical Peatland
Soil
Tropical Forest Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Sandy Soil
Peat Soil
Soil
Arabidopsis Rhizosphere
Switchgrass Rhizosphere
Tabebuia Heterophylla Rhizosphere
Arabidopsis Thaliana Rhizosphere
Switchgrass Rhizosphere
Populus Rhizosphere
Switchgrass Rhizosphere
Corn Rhizosphere
Miscanthus Rhizosphere
Miscanthus Rhizosphere
Arabidopsis Rhizosphere
3.3%12.6%12.6%4.9%13.2%3.8%18.7%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
FACENCE_52852602040502001SoilMSNTFVNWTSRVAIAGRVAEWRRQPQNWNELNMLGDYHLPFGKAEARTEAAKWLCQI
GPICI_029265802088090015SoilMSITFINRTSRVTIAGRVAASRRPHEWNELTMLGDYHLPFGKTEARAEAAKWLCRV
FE1_065590502189573002Grass SoilMSVTFINWTSRVAIAGRVAERRRPQGWNELTLRGDYHAPFGKAEARAEAEKWIWQI
INPhiseqgaiiFebDRAFT_10163474743300000364SoilMSDSFINRTSRVAIAGRVAERLRPQGWDDLSLRGDYHPPFGKTEARIEAAKWLCLV*
INPhiseqgaiiFebDRAFT_10163655133300000364SoilMSDSFINWTSRVAIAGRIGERLRLRGWNELTLCGDYHAPFGKSEARAEAAKWLCLV*
F14TC_10300585923300000559SoilMSNSFINWSSRVAIAGRIGKRLRPQGWNKFTLRGDYHLPFGKSEARAEAAKWLCQV*
AF_2010_repII_A01DRAFT_100077753300000580Forest SoilMSDSFINQTSRVAIAARVAEHHRPQYWTEFTLRGDYHSPFGKIEARAEAAKWLCLV*
AF_2010_repII_A01DRAFT_104301123300000580Forest SoilMSDSFINQTSRVAIAGRVAERHRPQYWNELTFRGDYHPPFGKIEARAEAAKWLCLI*
AF_2010_repII_A1DRAFT_1003700713300000597Forest SoilMSDSFINQTSRVAIAGRVXEHHRPWNELTLRGDYHPPFGKIEARAEAAKWLCLV*
JGI11851J11668_100273223300000754SoilMSITFINRTSRVAIAGRVAEWRRPHEWNEXTMLGDYHLPFGKAEARAEAAKWLCQV*
AF_2010_repII_A001DRAFT_1000676043300000793Forest SoilMSDSFINQTSRVAIAGRVAEHHRPWNELTLRGDYHPPFGKIEARAEAAKWLCLV*
AF_2010_repII_A10DRAFT_100865923300000816Forest SoilMSDSFINQTSRVAIAGRFAEHHRPQYWTELTLRGDYHPPFGKIEARAEAAKWLCLV*
AF_2010_repII_A10DRAFT_101893913300000816Forest SoilMSDSFINQTSRVAIAGRVAERHRPQYWNELTFRGDYHPPFGKIEARAEAAKWL
F14TB_10174015513300001431SoilNWTSRVAIAGRIGERLRLRGWNELTLCGDYHAPFGKSEARAEAAKWLCLV*
JGI25405J52794_1011030223300003911Tabebuia Heterophylla RhizosphereMSDNFINWSSRVAIAGRIGERLRPQGWNEFTLRGDYHLPFGKSEARAEAAKWLCQV*
Ga0055472_1005002323300003998Natural And Restored WetlandsMSDTSTNLTSRVAIAGRVAELRRQSQGWSETITLGDYHQPFGKMEARAEAAKWLWQP*
Ga0055436_1014601913300004024Natural And Restored WetlandsMLDNFTNWTSRVAIAGRVAERRRQPQDWNETMTLGDYHLPFGKVTAPAEAARWLCQP*
Ga0055433_1007086723300004025Natural And Restored WetlandsPMSDTFINRTSRVAIAGRIAEERRPQDWNELSTPGDYHPPFGESEAKAEAAKWLCQV*
Ga0063356_10061885323300004463Arabidopsis Thaliana RhizosphereMSDIFVNWTSRVAIAGRIAERRRPQDWNELTTPGDYHAPFGKIEAKVEAAKWLCQV*
Ga0062595_10037334323300004479SoilNTFMNLTSRVAIAGRRPRSWNESMILGDYHLPFGKVEARAEAAKWIWQI*
Ga0062595_10085507013300004479SoilMSDSFINQTSRVAIAGRVAEHHRPQYWTELTLRGDYHAPFGKIEARAEAAKWLCLV*
Ga0062595_10133812023300004479SoilMSITFINRTSRVAIAGRVAESRRPHEWNELAMLGDYHLPFGKTEARAEAAKWLCQV*
Ga0065704_1041314323300005289Switchgrass RhizosphereMSITFINRTSRVAIAGRVAEWRRPHEWNELTMLGDYHLPFGKAEARAEAAKWLCQV*
Ga0065705_1017325633300005294Switchgrass RhizosphereMIGGTMSITFINRTSRVAIAGRVAEWRRPHEWNELTMLGDYHLPFGKAEARAEAAKWLCQV*
Ga0066388_10007356023300005332Tropical Forest SoilMSDIFINWSSRVAISGRIGERLRPQGWNEFTLRGDYHAPFGKSEARVEAAKWLCQV*
Ga0066388_10024672943300005332Tropical Forest SoilMSDSFINQTSRVAISARVAEHHRPENWTELTTRGDYHLPFGKTEARTEAAKWLCQI*
Ga0066388_10036864623300005332Tropical Forest SoilMSDSFINQTSRVAIAGRVAEHQRPQYWTELTLRGDYHPPFGKIEARAEAAKWLCLV*
Ga0066388_10037358523300005332Tropical Forest SoilMSDSFINQTSRVAIAGRVAERHRPQYWNELTFQGDYHPPFGKIEARAEAAKWLCLI*
Ga0066388_10047107833300005332Tropical Forest SoilMSDSFINWTSRVAIAGRVGGQRHESWNELTLRGDYHAPFGKSQARAEAAKWLCQV*
Ga0066388_10116046523300005332Tropical Forest SoilMSDSFINWTSRVAIAGRVGERLRQESWNELTLRGDYHAPFGKSQARAEAAKWLWQV*
Ga0066388_10165000113300005332Tropical Forest SoilMSDSFINQTSRVAIAGRVSEHHRPWNELTLRGDYHPPFGKIEARAEAAKWLCLV*
Ga0066388_10207673523300005332Tropical Forest SoilMSGSFINHTSRVAIAGRVAEHQRPLCWSDLTLRGDYHPPFGKIEARLEAAKWLCLI*
Ga0066388_10213273623300005332Tropical Forest SoilMEVPMSDSFINWSSRVAIAGRIGERLRPQGWNEFIRGDYHRPFGKSEARAEAAKWLCQV*
Ga0066388_10280370213300005332Tropical Forest SoilMSDVFINWASRVAIAGRIGERLRPQGNDFTLRGDYHRPFGKSEARAEAVKWLC
Ga0066388_10326710833300005332Tropical Forest SoilMSDVFINWASRVAIAGRIGERLRPQGNDFTLRGDYHRPFGKSEARAE
Ga0066388_10846009313300005332Tropical Forest SoilMSDSFINQTSRVAIAARVAEHHRPQYWTELTLRGDYHSPFGKIEARAEAAKWLCL
Ga0070675_10074005833300005354Miscanthus RhizosphereMSGSFINHTSRVAIAGRVAEHHRPPCWNDLTLRGDYHPPFGKIEARLEAAKWLCLV*
Ga0070711_10059823413300005439Corn, Switchgrass And Miscanthus RhizosphereMSITFINRTSRVAIAGRLAEWRRQPQNWNELNMLGDYHLPFGKAEARAEAAKWLCQV*
Ga0066905_10014802823300005713Tropical Forest SoilMSDSFINQTSRVAIAARVAEHHRPQYWTELTLRGDYHSPFGKIEARAEAAKWLCLV*
Ga0066905_10034699823300005713Tropical Forest SoilMSDSFINWSSRVAIAGRIGERLRPQGWNEFTLRGDYQLPFGKSEARAEAAKWLCQV*
Ga0066905_10041231813300005713Tropical Forest SoilMSDSFINWSSRVAIAGRIGERHQPQGWNEFTLRGDYHLPFGKSEARAEA
Ga0066905_10045091913300005713Tropical Forest SoilNFRDPHHSRTQSTILYLRIDLRLEAPMSSSFINQTSRVAIAGRVAEHHRPWNELTLRGDYHPPFGRIEARTEAAKWLCLV*
Ga0066905_10053278033300005713Tropical Forest SoilMWDSFINWTSRVAIAGRIGERLRPQGWNELTLRGDYHPPFGKNEARAEAAKWLCQV*
Ga0066905_10062997123300005713Tropical Forest SoilMETPVSDTFINWTSRVAIAGRIGERLRAQGWNELTLRGDYHLPFGKSEARAEAAKWLCLV
Ga0066905_10071414433300005713Tropical Forest SoilMSGSFINHTSRVAIAGRVAEHQRPLCWNDLTLRGDYHPPFGKIEVQLEAAKWLCLV*
Ga0066903_10322219523300005764Tropical Forest SoilMSGSFINHTSRVAIAGRVTEHRRPLCWNDLTLRGDYHPPFGKIEARLEAAKWLCLI*
Ga0066903_10521684513300005764Tropical Forest SoilMSDTFINWTIRVAIAGRIGERLRPQGNDFTLRGDYHRPFGKSEARAEAVKWLCQV
Ga0066903_10812624223300005764Tropical Forest SoilMSGSFINHTSRVAIAGRVAEHRRPQDWNDLRLRGDYHPPFGKIEARLEAAKWLCLV*
Ga0066903_10823162513300005764Tropical Forest SoilMSDSFINQTSRVAIAGRVAEHHRPWNELTLRGDYHPPFGKIEARAE
Ga0081455_1000293323300005937Tabebuia Heterophylla RhizosphereVSIFINRTSRAAIAARVAESRRPHEWNELPMLGDYHLPFGKTEARAEAAKWLCQV*
Ga0081455_1002355823300005937Tabebuia Heterophylla RhizosphereMSNSFINWTSRVAIAGRVGERLRPQGWNEFTLRGDYHPPFGKSEARAEAAKWLCQV*
Ga0081455_1002399123300005937Tabebuia Heterophylla RhizosphereMSGTFINWTSRVAIAGRIGERLRPQGWNEFTLRGDYHPPFGKSEARAEAAKWLCQV*
Ga0081455_1024979523300005937Tabebuia Heterophylla RhizosphereMWDSFINWTSRVAIAGRVGERLRPQGWNELTLRGDYHPPFGKNEARAEAAKWLCQV*
Ga0081455_1064631313300005937Tabebuia Heterophylla RhizosphereMSDSFINWTSRVAIAGRIWERLRPQSWNELTLRGDYHPPFGKSEARAEAAKWLCQV*
Ga0081540_132169613300005983Tabebuia Heterophylla RhizosphereMSDSFINWISRVAIAGRIGERHQPQGWNEFTLRGDYHLPFGKSEARAEAAKWLCQV*
Ga0075417_1000076293300006049Populus RhizosphereMSITFINRTSRVTIAGRVAASRRPHEWNELTMLGDYHLPFGKTEARAEAAKWLCRV*
Ga0075417_1000178693300006049Populus RhizosphereMSDSFINWTSRVATAGHVGERQRHESWNELTLRGDYHAPFGKSEARAEAAKWLCQV*
Ga0075417_1014875443300006049Populus RhizosphereMSDSFINRTSRVAIAGRIAERLRPQGWKELTLRGDYHTPFGKSEARAEAAKWLCIV*
Ga0075028_10068238723300006050WatershedsFINRTSRVAIAGRVAESRRPHEWNELTMLGDYHLPFGKAEARAEAAKWLCQL*
Ga0075432_1002021243300006058Populus RhizosphereMSDSFINWTSRVAIAARIGERLRLRGWNELTLCGDYHAPFGKSEARAEAAKWLCLV*
Ga0075427_1000491153300006194Populus RhizosphereMSDSFINWTSRVAIAGHVGERQRHESWNELTLRGDYHAPFGKSEARAEAAKWLCQV*
Ga0075422_1009835023300006196Populus RhizosphereMSITFINRTSRVAIAGRVAASRRPHEWNELTMLGDYHLPFGKTEARAEAAKWLCRV*
Ga0075428_10005404983300006844Populus RhizosphereMSDSFINRTSRVAIAGRVAERLRPQGWNELTLRGDYHTPFGKSEARTEAAKWLCIV*
Ga0075428_10156182413300006844Populus RhizosphereMSITFINRTSRVAIAGRVAESRRPHEWNELTMLGDYHLPFGKTEARAEAVKWLCQV*
Ga0075430_10008168213300006846Populus RhizosphereMSDSFINRTSRVAIAGRVAERLRPQGWKELTLRGDYHTPFGKSEARAEAAKWLCVV*
Ga0075430_10043091823300006846Populus RhizosphereMSITFINRTSRVAIAGRVAERRPPHEWSELTILGDYHLPFGKAEARAEAAKWLCQV*
Ga0075431_10068735143300006847Populus RhizosphereMSDSFINRTSRVAIAGRIAERLRPQGWKELTLRGDYHTPFGKSEARAEAAKWLC
Ga0075433_1015636613300006852Populus RhizosphereEAPMSDSFINWTSRVAIAGHVGERQRHESWNELTLRGDYHAPFGKSEARAEAAKWLCQV*
Ga0075433_1091584223300006852Populus RhizosphereMSDSFINWTSRVAIAGRVGERQRHERWNELTLRGDYHAPFGKSEARAEAAKWLCQV*
Ga0075433_1131327713300006852Populus RhizosphereMSDSFINRTSRVAIAGRVAERLRPQGWNELTLRGDYHTPFGKSEARAEAAKWLCVV*
Ga0075425_10020371923300006854Populus RhizosphereMSDSFINRTSRVAIAGRVAERLRPQGWNELTLRGDYHAPFGKTEARVEAAKCLCLV*
Ga0075425_10052310043300006854Populus RhizosphereMSDSFTNHTSRVAIASRVAEHRRPLIWNDLTLRGDYHPPFGKIEARLEAAKWLCLV*
Ga0075425_10068924423300006854Populus RhizosphereMSDNFINQTSRVAISARVAEHHRPENWTELTTRGDYHQPFGKAEARTEAAKWLCQI*
Ga0075434_10074522923300006871Populus RhizosphereMSDSFINRTSRVAIAGRVAERLRPQGWNELTLRGDYHAPFGKTEARVEAAKWLCLV*
Ga0075424_10249359223300006904Populus RhizosphereMSGSFINHTSRVAIAGRVAEHQRPPCWNDLTLRGDYHPPFGKIEARLEAAKWLCLV*
Ga0075436_10009344533300006914Populus RhizosphereMSDSFINWTSRVCIAGRIGERLRLRGWNELTLCGDYHAPFGKSEARAEAAKWLCLV*
Ga0075419_1023926723300006969Populus RhizosphereMSDSFINRTSRVAIAGRIAERLRPQGWKELTLRGDYHTPFGKSEARAEAAKWLCVV*
Ga0075435_10021622413300007076Populus RhizosphereMSGSFINHTSRVAIAGRVAEHQRPQFWTDLTLRGDYHPPFGKIEARLEAAKWLCLV*
Ga0075435_10130123713300007076Populus RhizosphereMSDSFINRTSRVAIAGRVAERLRPQGWKELTLRGDYHKPFGKTEARAEAAKWLCIV*
Ga0075418_1156275723300009100Populus RhizosphereMADSFINRTSRVAIAGRVAERLRPQSWNELTLRGDYHAPFGKTEARAEAAKWLCLV*
Ga0075418_1264003413300009100Populus RhizosphereMSDSFINRTSRVAIAGRVAERLRPQGWNELTLRGDYHAPFGKTEARVEATKCLCLV*
Ga0114129_1265088323300009147Populus RhizosphereMLNTFVNWTSRVAIAGRVAGQRRADNWNELPMLGDYHLPFGNVEAKTEAAKWLCQV*
Ga0111538_1070089923300009156Populus RhizosphereMSGSFINHTSRVAIAGRVAEHRRPLIWNDLTLRGDYHPPFGKIEARLEAAKWLCLV*
Ga0075423_1079444123300009162Populus RhizosphereMSDSFINRTSRVAIAGRVADRLRPQGWNELTLRGDYHAPFGKTEARVEAAKWLCLV*
Ga0075423_1286424523300009162Populus RhizosphereMSDEFINQTSRVAISARVAEHHRPENWTELTTRGDYHQPFGKAEARTEAAKWLCQI*
Ga0105104_1054468413300009168Freshwater SedimentMSDSFINTSRVAIAGRIGERLRLRGWDELTLCGDYHAPFGKSEARAEAAKWLCLV*
Ga0126374_1020381423300009792Tropical Forest SoilMSDVFINWASRVAIAGRIGERLRPQGNDFTLRGDYHRPFGKSEARAEAVKWLCQV*
Ga0126380_1007061523300010043Tropical Forest SoilMSDSFINQTSRVAIAARVAEHHRPQYWTELTLRGDYHPPFGKIEARAEAAKWLCLV*
Ga0126380_1061160423300010043Tropical Forest SoilMSDSFINWSSRVAIAGRIGERLRPQGWNEFTLRGDYHLPFGKSEARAEAAKWLCQV*
Ga0126380_1187509413300010043Tropical Forest SoilMSDSFINRTSRVAIAARVLERLRPQGWNEFTLRGDYHPPFGKSEARAEAAKWLCQV*
Ga0126382_1042342523300010047Tropical Forest SoilTSRVAIAGRIAERLWNELSLRGDYHTPFGKTEARAEATKWLCLI*
Ga0126382_1081632713300010047Tropical Forest SoilMLDSFINRTSRVAIAGRIGERLRPQGWNELTLRGDYHPPSGKSEARAEAAKWLCLV*
Ga0126382_1152724413300010047Tropical Forest SoilMSDSFINWSSRVAIAGRIGERHQPQGWNEFTLRGDYHLPFGKSEARAEAAKWLCQV*
Ga0126370_1004250843300010358Tropical Forest SoilMSDTFINWTIRVAIAGRIGERLRPQGNDFTLRGDYHRPFGKSEARAEAVKWLCQV*
Ga0126376_1006018543300010359Tropical Forest SoilMSDMFINWASRVAIAGRIGERLRPQGNDFTLRGDYHRPFGKSEARAEAVKWLCQV*
Ga0126376_1102157913300010359Tropical Forest SoilMWDSFINWTSRVAIAGRIGERLRPQGWNELTLRGDYHPPFGKNEARAEAAK
Ga0126372_1273313913300010360Tropical Forest SoilMSDSFINQTSRVAIAGRVAEHHRPWNELTLRGDYHPPFGRIEARTEAAKWLCLV*
Ga0126377_1199769813300010362Tropical Forest SoilMSDSFINRTSRVTIAARVLERLRPQGWNEFTLRGDYHPPFGKSEARAEAAKWLCQV*
Ga0126379_1326977723300010366Tropical Forest SoilMSGSFINHTSRVAIAGRVAEHRRPQDWNDLRLRGDYHSPFGKIEARL
Ga0105239_1184993813300010375Corn RhizosphereMSASFINHTSRVAIAGRVAEHRRPLIWNDLTLRGDYHPPFGKIEARLEAAKWLCLV*
Ga0126381_10169436013300010376Tropical Forest SoilIDSRLEAPMSDSFINQTSRVAIAGRVAEHHRPWNELTLRGDYHPPFGKIEARAEAAKWLFLV*
Ga0126381_10219175013300010376Tropical Forest SoilMWDMFINWASRVAIAGRIGERLRPQGNDFTLRGDYHRPFGKSEARAEAVKWLCQV*
Ga0134123_1331105213300010403Terrestrial SoilMSITFINRTSRVAIAGRVAEWRRQPQNWNELNMLGDYHLPFGKAEARAEAAKWLCQV*
Ga0124844_129775123300010868Tropical Forest SoilMSDVFINWASRVAIAGRIGERLRPQGNDFTLRGDYYRPFGKSEARAEAVKWLCQV*
Ga0162653_10000466833300012937SoilMSITFINRTSRVAIAGRVAEQRRPETTDELTTPGDYHLPFGKEEARAEAAKWLCQV*
Ga0126375_1029124913300012948Tropical Forest SoilMSGSFINHTSRVAIAGRVAEHQRPLCWNDLTLRGDYHAPFGKIEARLEAAKWLCLV*
Ga0126375_1137571713300012948Tropical Forest SoilMSDSFINWSSRVAIVGRIGERLRPQGWNEFILRGDYHRPFGKSEARAEAAKWLCQV*
Ga0126375_1142738213300012948Tropical Forest SoilSRVAIAGRVAKHQGPQHWNELTLRGDYHPPFGKIEARAEAAKWFCLV*
Ga0164298_1001612423300012955SoilMSDSFINQTRRVALAGRVAEHHRPQYWTELTLRGDYHAPFGKIEARAEAAKWLCLV*
Ga0164303_1126913713300012957SoilMSNTFVNWTSRVAIAGRVAEWRRQPQNWNELNMLGDYHLPFGKAEARTEAAKWLCQV*
Ga0164302_1019483123300012961SoilMSITFINRTSRVAIAGRLAEWRRQPQNWNALNMLGDYHLPFGKAEARAEAAKWLCQV*
Ga0126369_1095350013300012971Tropical Forest SoilSRVAIAGRVAERHRPQYWNELTFRGDYHPPFGKIEARAEAAKWLCLI*
Ga0126369_1263364623300012971Tropical Forest SoilMSDTFINWTSRVAIAGRIGERLRPQGNEFTLRGDYHRPFGKSEARAEAV
Ga0164304_1013701313300012986SoilMSITFINRTSRVAIAGRVAEWRRQPQNWNELNMLGDYHLPFGKAEARAEAVKWLCQV
Ga0164305_1140019923300012989SoilMSNTFVNWTSRVAIAGRVAEWRRQPQNWNELNMLGDYHLPFGKAEARAEAVKWLCQV*
Ga0163162_1258916813300013306Switchgrass RhizosphereMSASFINHTSRVAIAGRVAEHRRPLCWNDLKLRGDYHPPFGKIEARLEAAKWLCLV*
Ga0157375_1264471713300013308Miscanthus RhizosphereMSGSFINHTSRVAIAGRVAEHQRPQCWNDLTLRGDYHPPFGKIEARLEAAKWLCLV*
Ga0132258_1084676513300015371Arabidopsis RhizosphereMSGSFINHTSRVAIAGRVAEHLRPQFWTYLTLRGDYHPPFGKIEARLEAAKWLCLV*
Ga0132258_1094911843300015371Arabidopsis RhizosphereMSDDFINQTSRVAISARVAEHHRPENWTELTTTRGDYHQPFGKAEARTEAAKWLCQI*
Ga0132258_1204579413300015371Arabidopsis RhizosphereMSNTFVNWSSRVAIAGRVAERRRLHEGNELTIQGDYPLPFGKAEARAEAAKWLCQV*
Ga0132256_10326660313300015372Arabidopsis RhizosphereMSGSFINHTSRVAIAGRVAEHQRPLFWNDLTLPGDYHPPFGKIEARLEAAKWLCLV*
Ga0132257_10057248533300015373Arabidopsis RhizosphereMSASFINHTSRVAIAGRVAEHQRPPCWNDLTLRGDYHPPFGKIEARLEAAKWLCLV*
Ga0182040_1000014643300016387SoilMSDSFINQTSRVAIAGRVSEHHTPWNELTLRGDYHPPFGKIEARAEAAKWLCLV
Ga0187773_1021025113300018064Tropical PeatlandMSTFVNWTSRVAVAGRIAERRCADNWNELPMRGDYHVPFGKAEARAEAAKWLWQV
Ga0184611_109470713300018067Groundwater SedimentMSNTFMNWTSWVAIAARIAERRRPQNWNELTPGDYHQPFGKAEARAEAAKWLCQV
Ga0184635_1018750723300018072Groundwater SedimentMSNTFMNWTSWVAIAARIAERRRPQNWNELTMPGDYHQPFGKAEARAEAAKWLCQV
Ga0184635_1028491813300018072Groundwater SedimentPMSITFINRTSRVAIAGRVAEWRRQPQNWNELNMLGDYHLPFGKAEARAEAAKWLCQV
Ga0184625_1006983923300018081Groundwater SedimentMSITFINRTSRVAIAGRVAEWRRPHEWNELTMLGDYHLPFGKAEARAEAAKWLCQV
Ga0184625_1014717323300018081Groundwater SedimentMSNTFMNWTSWVAIAARIAERRRPQNWNELTMPGDFHQPFGKAEARAEAAKWLCQV
Ga0184625_1038293323300018081Groundwater SedimentMSDSFVNWTSRVAIAGRIVKRLRPQGWNEFTLRGDYHPPFGKSEARAEAAKWLCQV
Ga0184644_108413813300019269Groundwater SedimentGAPMSITFINRTSRVAIAGRVAEWRRQPQNWNELNMLGDYHLPFGKAEARAEAAKWLCQV
Ga0193705_108618523300019869SoilSRVAIAGRVAEWRRQPQNWNELNMLGDYHLPFGKAEARAEAAKWLCEV
Ga0193722_107349323300019877SoilMSDRFINWTSRVAIAARIGERLRPQGWNEFTLRGDYHPPFGKSEARA
Ga0210381_1012947113300021078Groundwater SedimentMSITFINRTSRVAIAGRVAEWRRQPQNWNELNMLGDYHLPFGKAEARTEAAKWLCQV
Ga0193719_1005835643300021344SoilMSDNFINWTSRVAIAGRVGERLRPQGWNEAFRGDYHPPFGKAEARAEAAKWIWQV
Ga0193719_1019360123300021344SoilMSITFINRTSRVAIAGRVAEWRGQPQNWNELNMLGDYHLPFGKAEARTEAAKWLCQV
Ga0126371_1002861763300021560Tropical Forest SoilMSDSFINQTSRVAIAGRVAERHRPQYWNELTFRGDYHPPFGKIEARAEAAKWLCLI
Ga0126371_1084047733300021560Tropical Forest SoilSLINQTSRVAIAARVPEHHRPQYWTELTLRGDYHSPFGKIVARAEAAKWLCLV
Ga0126371_1134506713300021560Tropical Forest SoilMSDSFINQTSRVAIAGRVAEHHRPWNELTLRGDYHPPFGKIEARAEAAKWLCLV
Ga0222624_134927613300021951Groundwater SedimentALMSITFINRTSRVAIAGCVAEWRRQPQNWNELTMLGDYHLPFGKAEARAEAAKWLCQV
Ga0222624_135146513300021951Groundwater SedimentLGAPMSITFVNGTSRVAIGGCVAGSRRPHEWNELTMLGDYHLPFGKAEARAEAAKWLCQV
Ga0222625_148570123300022195Groundwater SedimentGLGAPMSITFINRTSRVAIAGRVAEWRRQPQNWNELNMLGDYHLPFGKAEARAEAAKWLCQV
Ga0222623_1033858723300022694Groundwater SedimentMSDSFINRTSRVAIAGRIGERLRPQGWNEFTLRGDYHLPFGESEARAQAAKWLCLV
Ga0222622_1008698313300022756Groundwater SedimentVLVSIRVLQRLEVTMSNTFRNWTSRVAIAGRIADRRRLQDWNELTMPGDYHGPFGKTVARAEAAKWLWQI
Ga0207663_1052685933300025916Corn, Switchgrass And Miscanthus RhizosphereMSDDFINQTSRVAIAGRVAEHHRPQYWTELTLRGDYHAPFGKIEARAEAAKWLCLV
Ga0207712_1114638423300025961Switchgrass RhizosphereMSGSFINHTSRVAIAGRVAEHQRPLCWNDLTLRGDYHPPFGKIEARLEAAKWLCLV
Ga0209814_1000316053300027873Populus RhizosphereMSDSFINWTSRVAIAGHVGERQRHESWNELTLRGDYHAPFGKSEARAEAAKWLCQV
Ga0209814_1006934433300027873Populus RhizosphereMSDSFINWTSRVAIAGRIGERLRLRGWNELTLCGDYHAPFGKSEARAEAAKWLCLV
Ga0209481_1035903023300027880Populus RhizosphereAFFNRTSRVAIAGRVAERLRPQGWKELTLRGDYHTPFGKSEARAEAAKWLCVV
Ga0207428_1005570133300027907Populus RhizosphereMSDSFINRTSRVAIAGRVAERLRPQGWKELTLRGDYHTPFGKSEARAEAAKWLCVV
Ga0209382_1208039523300027909Populus RhizosphereMSITFINRTSRVAIAGRVAESRRPHEWNELTMLGDYHLPFGKTEARAEAVKWLCQV
Ga0307295_1007156813300028708SoilMSITFINRTSRVAIAGRVAEWRRQPQNWNELNMLGDYHLPFGKAEARAEAAKWLCQV
Ga0307282_1038354713300028784SoilSAVLVSIRVLQRLEVTMSNTFRNWTSRVAIAGRIADRRRLQDWNELTMPGDYHGPFGKTVARAEAAKWLWQI
Ga0307302_1016790213300028814SoilMSDSFINWNSRVAIAGRVGERQRHESWNELTLRGDYHPPFGKSEARAEAAKWLCQV
Ga0307312_1025140133300028828SoilWEGPMSDSFINRASRVAIAGRIGERLRPQGWNELTLRGDHHPPFGKSEARAEAAKWLCQV
Ga0075394_1196478723300030969SoilSRVAIAGRVAEWRRQPQSWNELNMLGDYHLPFGKAEARTEAAKWLCQV
Ga0308190_120026713300030993SoilLGAPMSITFINRTSRVAIAGRVAEWRRQPQNWNELNMLGDYHLPFGKAEARAEAAKWLCQ
Ga0308193_106967213300031096SoilLGAPMSITLINRTSRVAIAGRVAEWRRQPQNWNELNMLGDYHLPFGKAEARAEAAKWLCE
Ga0307498_1000225863300031170SoilMSNTFVNWTSWVAIAGRIAEERRVDRNELPMLGDYHLPFGKVEAKAEAAKWLCQV
Ga0307498_1015539723300031170SoilMSVSFINWTSRVAIAGRVAERRRPQGWNELTLRGDYHAPFGKAEAWA
Ga0307498_1028300923300031170SoilLQSEPEASMSNTFVNWTSWVAIAGRVAEQRHADRNELPMLGDYHLPFGKVEAKAEAEKWLCQV
(restricted) Ga0255310_1008587023300031197Sandy SoilMNTFINWTSQVAIASRIVEERREQDWNELKLLGDYHPPFGKDEARAEAAKWLCQV
Ga0307495_1019063223300031199SoilLQSEPEASMSNTFVNWTSWVAIAGRVAEQRRADRNELPMLGDYHLPFGKVEAKAEAAKWLCQV
Ga0307497_1047872313300031226SoilMSNTFVNWTSWVAIAGRVAEQRRADRDELQMLGDYHLPFGKGEAKAEAAKWLCQV
Ga0170824_10951719023300031231Forest SoilMSVTFINWTSRVAIAARVAERRRPQGWNELTLRGDYHAPFGKAEARAEAEKWIWQI
Ga0170820_1084221713300031446Forest SoilMSSTYVNWSSRVAIAGRVAERRRPHEWNELTIQGDYHLRFGKAEARAAAAKWLCQI
Ga0170819_1483101113300031469Forest SoilQGLGAPMSITFINRTSRVAIAGRVAEWRRQPQNWNELNMLGDYHLPFGKAEARAEAAKWLCQV
Ga0318541_10000149253300031545SoilMSDSFINQTSRVAIAGRVSEHHRPWNELTLRGDYHPPFGKIEARAEAAKWLCLV
Ga0310887_1112756513300031547SoilMSITFINRTSRVAIAGRLAEWRRQPQNWNELNMLGDYHLPFGKAEARAEAAKWLCQV
Ga0318561_1004983553300031679SoilYLRIDSRLEAPMSDSFINQTSRVAIAGRVAERHRPQYWNELTFRGDYHPPFGKIEARAEAAKWLCLI
Ga0307469_1135065923300031720Hardwood Forest SoilMSITFINRTSRAAIAGRVAEWRRPHEWNELTMLGDYHLPFGKAEARAEAAKWLCQV
Ga0307469_1158983513300031720Hardwood Forest SoilMSITFINRTSRVAIAGRVAESRRPHEWNELTMLGDYHLPFGKAEARAEAAKWLCQL
Ga0318500_1012215633300031724SoilILYLRIDSRLEAPMSDSFINQTSRVAIAGRVAERHRPQYWNELTFRGDYHPPFGKIEARAEAAKWLCLI
Ga0307468_10098557423300031740Hardwood Forest SoilMSITFINRTSRAAIASRVAEWRRPHEWNELTMLGDYHLPFGKAEARAEAAKWLCQV
Ga0318527_1034134413300031859SoilSRLEAPMSDSFINQTSRVAIAGRVAERHRPQYWNELTFRGDYHPPFGKIEARAEAAKWLCLI
Ga0307471_10066642723300032180Hardwood Forest SoilMSNTFVNWTSRVAIAGRVAEWRRQPQNWNELNMLGDYHLPFGKAEARTEAAKWLCQV
Ga0326726_1032487013300033433Peat SoilMFTFINQTSRAAIEGHIAQRRGANDWNELTTRGDHHLPFGKAEARAEAAKWLCQV
Ga0326726_1193736623300033433Peat SoilMSNTYVNWSSRVAIAGRVAERRRQPQNWNELKMLGDYHLPFGKAEARTEAAKWLCQV
Ga0326723_0461214_394_5643300034090Peat SoilMSNTFMNWTSWVAVAARIAERRRPQNWNELTTPGDYHQPFGKAEARAEAAKWLCQV
Ga0370545_096533_449_6223300034643SoilMSITFINRTSRVAIAGCVAEWRRQPQNWNELNMLGDYHLPFGKAEARAEAAKWLCQV
Ga0370541_021149_14_1873300034680SoilMSITFINRTSRVAIAGRVAEWRRQPQNWNELNMLGDYHLPFGKTEARTEAAKWLCQV
Ga0370546_031901_566_7513300034681SoilIGAPMSITFINRTSRVASSGRVSEWRRAPQNWNELNMLGDYHLPFGKAEARAEAAKWLCQ


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.