Metagenome / Metatranscriptome Family F031229

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F031229
Family Type	Metagenome / Metatranscriptome
Number of Sequences	183
Average Sequence Length	40 residues
Representative Sequence	MGQWLIADLSVSDVHFQLWMLLVTGIVLLWFVYVWATR
Number of Associated Samples	116
Number of Associated Scaffolds	183

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	82.97 %
% of genes near scaffold ends (potentially truncated)	20.77 %
% of genes from short scaffolds (< 2000 bps)	93.44 %
Associated GOLD sequencing projects	105
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (56.831 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (15.300 % of family members)
Environment Ontology (ENVO)	Unclassified (26.230 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (71.585 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.55% β-sheet: 0.00% Coil/Unstructured: 45.45%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 183 Family Scaffolds
PF00536	SAM_1	2.19
PF12787	EcsC	2.19
PF07859	Abhydrolase_3	1.64
PF00872	Transposase_mut	1.64
PF13185	GAF_2	1.64
PF13191	AAA_16	1.09
PF00589	Phage_integrase	1.09
PF01590	GAF	1.09
PF07721	TPR_4	1.09
PF12006	DUF3500	0.55
PF08240	ADH_N	0.55
PF00999	Na_H_Exchanger	0.55
PF13683	rve_3	0.55
PF03992	ABM	0.55
PF06078	DUF937	0.55
PF13826	DUF4188	0.55
PF07647	SAM_2	0.55
PF02771	Acyl-CoA_dh_N	0.55
PF00440	TetR_N	0.55
PF03703	bPH_2	0.55
PF04392	ABC_sub_bind	0.55

COG ID	Name	Functional Category	% Frequency in 183 Family Scaffolds
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	1.64
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	1.64
COG0025	NhaP-type Na+/H+ or K+/H+ antiporter	Inorganic ion transport and metabolism [P]	0.55
COG0475	Kef-type K+ transport system, membrane component KefB	Inorganic ion transport and metabolism [P]	0.55
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.55
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.55
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	0.55
COG3263	NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains	Energy production and conversion [C]	0.55
COG3402	Uncharacterized membrane protein YdbS, contains bPH2 (bacterial pleckstrin homology) domain	Function unknown [S]	0.55
COG3428	Uncharacterized membrane protein YdbT, contains bPH2 (bacterial pleckstrin homology) domain	Function unknown [S]	0.55
COG3753	Uncharacterized conserved protein YidB, DUF937 family	Function unknown [S]	0.55
COG4651	Predicted Kef-type K+ transport protein, K+/H+ antiporter domain	Inorganic ion transport and metabolism [P]	0.55

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.83 %
All Organisms	root	All Organisms	43.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.83 %
cellular organisms	root	All Organisms → cellular organisms	43.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.83 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	42.62 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	31.15 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.55 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	26.78 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.55 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.55 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.83 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	18.03 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.55 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.55 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.55 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.83 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	10.93 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.55 %
unclassified Burkholderiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales	0.55 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.55 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.55 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.55 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.83 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	8.20 %
Burkholderiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium	0.55 %
Rhizobiales bacterium GAS191	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS191	0.55 %
Beijerinckia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Beijerinckia	0.55 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.55 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.55 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.83 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	1.09 %
Bradyrhizobium diazoefficiens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	1.09 %
unclassified Beijerinckia	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Beijerinckia → unclassified Beijerinckia	0.55 %
Burkholderiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium	0.55 %
Rhizobiales bacterium GAS191	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS191	0.55 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.55 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.55 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.83 %
Bradyrhizobium diazoefficiens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	1.09 %
Beijerinckia sp. 28-YEA-48	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Beijerinckia → unclassified Beijerinckia → Beijerinckia sp. 28-YEA-48	0.55 %
Bradyrhizobium sp. LMTR 3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. LMTR 3	0.55 %
Bradyrhizobium sp. 187	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 187	0.55 %
Burkholderiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium	0.55 %
Rhizobiales bacterium GAS191	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS191	0.55 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.55 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.55 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.55 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2166559005\|cont_contig40104	All Organisms → cellular organisms → Bacteria	936	Open in IMG/M
3300003505\|JGIcombinedJ51221_10048644	Not Available	1604	Open in IMG/M
3300004152\|Ga0062386_101242022	Not Available	619	Open in IMG/M
3300005147\|Ga0066821_1007943	Not Available	718	Open in IMG/M
3300005332\|Ga0066388_101909241	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1060	Open in IMG/M
3300005332\|Ga0066388_106995156	All Organisms → cellular organisms → Bacteria → Proteobacteria	568	Open in IMG/M
3300005336\|Ga0070680_101777611	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300005437\|Ga0070710_10990875	Not Available	612	Open in IMG/M
3300005439\|Ga0070711_100223792	Not Available	1464	Open in IMG/M
3300005541\|Ga0070733_10162325	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1453	Open in IMG/M
3300005610\|Ga0070763_10185590	Not Available	1103	Open in IMG/M
3300005764\|Ga0066903_100678938	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1809	Open in IMG/M
3300005764\|Ga0066903_101035017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1505	Open in IMG/M
3300005764\|Ga0066903_104071344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	783	Open in IMG/M
3300005764\|Ga0066903_104368687	Not Available	755	Open in IMG/M
3300005764\|Ga0066903_104549127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Beijerinckia → unclassified Beijerinckia → Beijerinckia sp. 28-YEA-48	739	Open in IMG/M
3300005764\|Ga0066903_105548807	Not Available	665	Open in IMG/M
3300005921\|Ga0070766_10114957	Not Available	1611	Open in IMG/M
3300006041\|Ga0075023_100534983	Not Available	534	Open in IMG/M
3300006047\|Ga0075024_100821101	Not Available	522	Open in IMG/M
3300006050\|Ga0075028_101030856	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	513	Open in IMG/M
3300006052\|Ga0075029_100274674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1070	Open in IMG/M
3300006057\|Ga0075026_100271991	All Organisms → cellular organisms → Bacteria	916	Open in IMG/M
3300006059\|Ga0075017_100227004	All Organisms → cellular organisms → Bacteria	1359	Open in IMG/M
3300006059\|Ga0075017_100347456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1104	Open in IMG/M
3300006059\|Ga0075017_100568248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	865	Open in IMG/M
3300006086\|Ga0075019_10297079	Not Available	972	Open in IMG/M
3300006172\|Ga0075018_10623265	Not Available	576	Open in IMG/M
3300006174\|Ga0075014_100021584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2477	Open in IMG/M
3300006174\|Ga0075014_100334463	Not Available	808	Open in IMG/M
3300006174\|Ga0075014_100382271	Not Available	763	Open in IMG/M
3300006354\|Ga0075021_10254269	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1082	Open in IMG/M
3300006606\|Ga0074062_10402917	Not Available	744	Open in IMG/M
3300006893\|Ga0073928_10940716	Not Available	591	Open in IMG/M
3300009098\|Ga0105245_12246628	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300009520\|Ga0116214_1292310	Not Available	624	Open in IMG/M
3300009521\|Ga0116222_1040830	Not Available	2032	Open in IMG/M
3300009522\|Ga0116218_1025990	All Organisms → cellular organisms → Bacteria	2616	Open in IMG/M
3300009522\|Ga0116218_1434907	Not Available	585	Open in IMG/M
3300009522\|Ga0116218_1512542	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	534	Open in IMG/M
3300009525\|Ga0116220_10127246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1088	Open in IMG/M
3300009700\|Ga0116217_10883325	Not Available	549	Open in IMG/M
3300010046\|Ga0126384_10589550	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	972	Open in IMG/M
3300010048\|Ga0126373_10919013	Not Available	939	Open in IMG/M
3300010048\|Ga0126373_12097240	Not Available	627	Open in IMG/M
3300010339\|Ga0074046_10480476	Not Available	743	Open in IMG/M
3300010359\|Ga0126376_11555882	Not Available	692	Open in IMG/M
3300010360\|Ga0126372_12651180	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300010361\|Ga0126378_10900797	All Organisms → cellular organisms → Bacteria → Proteobacteria	991	Open in IMG/M
3300010362\|Ga0126377_13047198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	541	Open in IMG/M
3300010366\|Ga0126379_12600127	Not Available	604	Open in IMG/M
3300010371\|Ga0134125_12318123	Not Available	584	Open in IMG/M
3300010376\|Ga0126381_101475916	Not Available	983	Open in IMG/M
3300010376\|Ga0126381_101656773	All Organisms → cellular organisms → Bacteria	924	Open in IMG/M
3300010376\|Ga0126381_101909411	Not Available	856	Open in IMG/M
3300010376\|Ga0126381_102770906	Not Available	700	Open in IMG/M
3300010376\|Ga0126381_103241875	Not Available	643	Open in IMG/M
3300010376\|Ga0126381_103491105	Not Available	618	Open in IMG/M
3300010379\|Ga0136449_100645064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium	1791	Open in IMG/M
3300010379\|Ga0136449_100669034	Not Available	1749	Open in IMG/M
3300010379\|Ga0136449_100758000	All Organisms → cellular organisms → Bacteria → Proteobacteria	1614	Open in IMG/M
3300010379\|Ga0136449_101127259	Not Available	1245	Open in IMG/M
3300010379\|Ga0136449_101307218	Not Available	1130	Open in IMG/M
3300010379\|Ga0136449_101385714	Not Available	1087	Open in IMG/M
3300010379\|Ga0136449_103456754	All Organisms → cellular organisms → Bacteria → Proteobacteria	603	Open in IMG/M
3300010379\|Ga0136449_103663367	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	581	Open in IMG/M
3300010398\|Ga0126383_12486210	Not Available	602	Open in IMG/M
3300010398\|Ga0126383_12552122	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	595	Open in IMG/M
3300011120\|Ga0150983_11576359	Not Available	546	Open in IMG/M
3300011120\|Ga0150983_14809963	Not Available	636	Open in IMG/M
3300012177\|Ga0153943_1135983	Not Available	535	Open in IMG/M
3300012181\|Ga0153922_1175642	Not Available	508	Open in IMG/M
3300012958\|Ga0164299_10500255	Not Available	808	Open in IMG/M
3300012971\|Ga0126369_12997474	Not Available	553	Open in IMG/M
3300012989\|Ga0164305_10452849	Not Available	997	Open in IMG/M
3300014169\|Ga0181531_10555001	Not Available	711	Open in IMG/M
3300014201\|Ga0181537_10203664	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1360	Open in IMG/M
3300014654\|Ga0181525_10285260	Not Available	901	Open in IMG/M
3300015371\|Ga0132258_11423223	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1751	Open in IMG/M
3300016270\|Ga0182036_10322750	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1181	Open in IMG/M
3300016270\|Ga0182036_11508738	Not Available	564	Open in IMG/M
3300016294\|Ga0182041_10934953	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	781	Open in IMG/M
3300016294\|Ga0182041_12305653	Not Available	504	Open in IMG/M
3300016341\|Ga0182035_11319219	Not Available	646	Open in IMG/M
3300016341\|Ga0182035_11730328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	565	Open in IMG/M
3300016357\|Ga0182032_10686289	All Organisms → cellular organisms → Bacteria	859	Open in IMG/M
3300016357\|Ga0182032_10792404	Not Available	800	Open in IMG/M
3300016371\|Ga0182034_11105912	Not Available	687	Open in IMG/M
3300016371\|Ga0182034_11317375	Not Available	630	Open in IMG/M
3300016387\|Ga0182040_11601842	Not Available	554	Open in IMG/M
3300016387\|Ga0182040_11603131	Not Available	554	Open in IMG/M
3300016404\|Ga0182037_11306086	Not Available	640	Open in IMG/M
3300016404\|Ga0182037_11590515	Not Available	581	Open in IMG/M
3300016445\|Ga0182038_10220333	All Organisms → cellular organisms → Bacteria	1507	Open in IMG/M
3300017822\|Ga0187802_10223067	Not Available	727	Open in IMG/M
3300017933\|Ga0187801_10019120	All Organisms → cellular organisms → Bacteria → Proteobacteria	2315	Open in IMG/M
3300017933\|Ga0187801_10057674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	1421	Open in IMG/M
3300017936\|Ga0187821_10313979	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 187	625	Open in IMG/M
3300017943\|Ga0187819_10697661	Not Available	572	Open in IMG/M
3300017946\|Ga0187879_10098856	All Organisms → cellular organisms → Bacteria	1674	Open in IMG/M
3300017955\|Ga0187817_10308888	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	1008	Open in IMG/M
3300017955\|Ga0187817_10419659	Not Available	854	Open in IMG/M
3300017955\|Ga0187817_10750096	Not Available	623	Open in IMG/M
3300017970\|Ga0187783_10159735	Not Available	1660	Open in IMG/M
3300017970\|Ga0187783_10238480	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. LMTR 3	1331	Open in IMG/M
3300017970\|Ga0187783_10407192	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	988	Open in IMG/M
3300017970\|Ga0187783_10885151	Not Available	644	Open in IMG/M
3300017972\|Ga0187781_11117772	Not Available	578	Open in IMG/M
3300017974\|Ga0187777_10228132	All Organisms → cellular organisms → Bacteria	1260	Open in IMG/M
3300017975\|Ga0187782_11489765	Not Available	533	Open in IMG/M
3300017995\|Ga0187816_10547268	Not Available	521	Open in IMG/M
3300018007\|Ga0187805_10316734	Not Available	718	Open in IMG/M
3300018085\|Ga0187772_10187609	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1384	Open in IMG/M
3300018085\|Ga0187772_10571168	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	803	Open in IMG/M
3300020579\|Ga0210407_10906434	Not Available	676	Open in IMG/M
3300020579\|Ga0210407_10939790	Not Available	662	Open in IMG/M
3300020582\|Ga0210395_10431196	All Organisms → cellular organisms → Bacteria	992	Open in IMG/M
3300020583\|Ga0210401_10639130	Not Available	925	Open in IMG/M
3300020583\|Ga0210401_10641704	Not Available	923	Open in IMG/M
3300020583\|Ga0210401_10716670	Not Available	861	Open in IMG/M
3300021170\|Ga0210400_10091490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2401	Open in IMG/M
3300021171\|Ga0210405_10491359	Not Available	962	Open in IMG/M
3300021178\|Ga0210408_11010094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	643	Open in IMG/M
3300021180\|Ga0210396_10189714	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1839	Open in IMG/M
3300021401\|Ga0210393_10401228	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1118	Open in IMG/M
3300021405\|Ga0210387_10292587	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1432	Open in IMG/M
3300021405\|Ga0210387_10782165	Not Available	844	Open in IMG/M
3300021405\|Ga0210387_11379239	Not Available	607	Open in IMG/M
3300021407\|Ga0210383_10544329	Not Available	1002	Open in IMG/M
3300021407\|Ga0210383_11095147	Not Available	673	Open in IMG/M
3300021407\|Ga0210383_11620911	Not Available	532	Open in IMG/M
3300021420\|Ga0210394_10359506	Not Available	1280	Open in IMG/M
3300021433\|Ga0210391_10953215	Not Available	669	Open in IMG/M
3300021474\|Ga0210390_11006975	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300021560\|Ga0126371_10422423	All Organisms → cellular organisms → Bacteria	1477	Open in IMG/M
3300021560\|Ga0126371_11471129	Not Available	810	Open in IMG/M
3300022498\|Ga0242644_1043418	Not Available	515	Open in IMG/M
3300022498\|Ga0242644_1046771	Not Available	502	Open in IMG/M
3300022508\|Ga0222728_1107700	Not Available	535	Open in IMG/M
3300022533\|Ga0242662_10074742	Not Available	923	Open in IMG/M
3300022533\|Ga0242662_10312592	Not Available	527	Open in IMG/M
3300022709\|Ga0222756_1044185	Not Available	652	Open in IMG/M
3300022715\|Ga0242678_1027148	Not Available	734	Open in IMG/M
3300022724\|Ga0242665_10157985	Not Available	721	Open in IMG/M
3300025933\|Ga0207706_10200816	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS191	1749	Open in IMG/M
3300026999\|Ga0207949_1011397	Not Available	806	Open in IMG/M
3300027604\|Ga0208324_1038793	All Organisms → cellular organisms → Bacteria	1415	Open in IMG/M
3300027604\|Ga0208324_1138990	Not Available	665	Open in IMG/M
3300027867\|Ga0209167_10771871	Not Available	524	Open in IMG/M
3300027894\|Ga0209068_10831664	Not Available	545	Open in IMG/M
3300027898\|Ga0209067_10543831	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	663	Open in IMG/M
3300027898\|Ga0209067_10629789	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300027908\|Ga0209006_10237709	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1571	Open in IMG/M
3300027910\|Ga0209583_10215611	Not Available	828	Open in IMG/M
3300027910\|Ga0209583_10519230	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	592	Open in IMG/M
3300029999\|Ga0311339_10120412	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3172	Open in IMG/M
3300029999\|Ga0311339_10345758	All Organisms → cellular organisms → Eukaryota → Opisthokonta	1576	Open in IMG/M
3300030503\|Ga0311370_11351766	Not Available	757	Open in IMG/M
3300030503\|Ga0311370_11702446	Not Available	647	Open in IMG/M
3300030524\|Ga0311357_11378896	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	602	Open in IMG/M
3300030707\|Ga0310038_10070058	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1910	Open in IMG/M
3300031231\|Ga0170824_104921904	Not Available	721	Open in IMG/M
3300031708\|Ga0310686_105380741	All Organisms → cellular organisms → Bacteria	4504	Open in IMG/M
3300031708\|Ga0310686_108442225	Not Available	1730	Open in IMG/M
3300031708\|Ga0310686_112508339	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300031708\|Ga0310686_112784167	All Organisms → cellular organisms → Bacteria → Proteobacteria	1989	Open in IMG/M
3300031708\|Ga0310686_119014166	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3853	Open in IMG/M
3300031719\|Ga0306917_11372208	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	546	Open in IMG/M
3300031814\|Ga0247548_106645	Not Available	566	Open in IMG/M
3300031823\|Ga0307478_10741092	Not Available	823	Open in IMG/M
3300031890\|Ga0306925_10755778	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1013	Open in IMG/M
3300031890\|Ga0306925_12146068	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300032076\|Ga0306924_11445454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	732	Open in IMG/M
3300032160\|Ga0311301_10258359	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2858	Open in IMG/M
3300032160\|Ga0311301_10320014	Not Available	2462	Open in IMG/M
3300032160\|Ga0311301_10744680	All Organisms → cellular organisms → Bacteria → Proteobacteria	1363	Open in IMG/M
3300032160\|Ga0311301_11181639	Not Available	983	Open in IMG/M
3300032160\|Ga0311301_11460977	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	846	Open in IMG/M
3300032160\|Ga0311301_12462469	Not Available	584	Open in IMG/M
3300032180\|Ga0307471_102940278	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	605	Open in IMG/M
3300032261\|Ga0306920_102880442	Not Available	653	Open in IMG/M
3300032895\|Ga0335074_10145504	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3011	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.72%
Host-Associated	Host-Associated	2.73%
Engineered	Engineered	0.55%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	77.05%
Aquatic	Environmental → Aquatic	19.67%
Plants	Host-Associated → Plants	1.64%
Fungi	Host-Associated → Fungi	1.09%
Modeled	Engineered → Modeled	0.55%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	74.32%
Sediment	Environmental → Aquatic → Sediment	10.38%
Freshwater	Environmental → Aquatic → Freshwater	8.74%
Peat	Environmental → Terrestrial → Peat	2.73%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.09%
Mycelium	Host-Associated → Fungi → Mycelium	1.09%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.55%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.55%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	0.55%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	58.47%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	10.38%
Loam	Environmental → Terrestrial → Soil → Loam	9.84%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	8.74%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.01%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.73%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	1.09%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.55%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.55%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	0.55%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.60%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	27.87%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	10.38%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.20%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.01%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	5.46%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.28%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.73%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.64%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	1.09%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.55%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	0.55%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.30%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	13.11%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	10.38%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.93%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	5.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.37%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.37%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.73%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.73%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.64%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.09%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.09%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.09%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.09%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.09%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	1.09%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.55%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.55%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.55%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.55%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.55%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.55%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.55%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.55%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.55%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.55%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	0.55%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559005	Simulated microbial communities from Lyon, France	Engineered	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005147	Soil and rhizosphere microbial communities from Laval, Canada - mgLMC	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012177	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ027 MetaG	Host-Associated	Open in IMG/M
3300012181	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ006 MetaG	Host-Associated	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022498	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022508	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022709	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022715	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026999	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF044 (SPAdes)	Environmental	Open in IMG/M
3300027604	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031814	Metatranscriptome of spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZI4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
cont_0104.00003380	2166559005	Simulated	MGQWLIADLSVSDVHFQLWMLLVTGIVLLWFVYVWATR
JGIcombinedJ51221_100486442	3300003505	Forest Soil	MGQWLIADVSLFDVHLQLWMLFATGIMLLWFIYVWATRLR*
Ga0062386_1012215432	3300004152	Bog Forest Soil	MGEWLAADLSFLDVHFQAWMLAVLGIFLFWFPYAWRQRR*
Ga0062386_1012420222	3300004152	Bog Forest Soil	MGQWLVADLSVMDVHFQLWMVVVTAILLVWFSFVWATRHVR*
Ga0066821_10079432	3300005147	Soil	GATFREGDQQMGQWLIADVSVFDVHLQLWMLLATGIMLLWFIYVWATRLR*
Ga0066388_1019092411	3300005332	Tropical Forest Soil	MREWLAADMSVMDVHFQLWMVLVAAFLLGWFALVWATRHVR*
Ga0066388_1069951562	3300005332	Tropical Forest Soil	MGQWLVADISVMDVHFQLWMVLVTAMLLVWFAFVWATRHVR*
Ga0070680_1017776112	3300005336	Corn Rhizosphere	MAQWLIADVSLFDVHVQVWMLLVAGIFLSWFFFVWRQPH*
Ga0070710_109908752	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MGQWLIADVSVFDVHLQLWMLLATGIMLLWFIYVWATRLR*
Ga0070711_1002237924	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MGQWLIADVSLLNVHVQLWMLLVIGIMLLWIIYVWASNCV*
Ga0070733_101623252	3300005541	Surface Soil	MAEWLIADVPLFNIHVQLWMLLVTGLVLIWFLYAWVTR*
Ga0070763_101855903	3300005610	Soil	MGQWLIADLSVSDVHFQLWMLLVTGIVLLWFVYVWATR*
Ga0066903_1006789381	3300005764	Tropical Forest Soil	MRDLLVADLSVMNVHFQLWMVLVTAILLIWFAFVWATRPVR*
Ga0066903_1010350174	3300005764	Tropical Forest Soil	MGQWLIADLSVLDVHFQLWMLLVTGIILTWFVYVWATR*
Ga0066903_1040713443	3300005764	Tropical Forest Soil	WLIADVSIFDVHLQFWMVLVGGILLLWFIWAWVTRTVR*
Ga0066903_1043686873	3300005764	Tropical Forest Soil	MGQWLIADFSILDVHVQLWMMLVTGIILFWFVYVWATR*
Ga0066903_1045491272	3300005764	Tropical Forest Soil	MRDLLVADLSVMHVHFQLWMVLVTAILLIWFAFVWATRHVR*
Ga0066903_1055488072	3300005764	Tropical Forest Soil	MGQWLIADLSVSDVHFHVWMLLVTGIILFWFLYVWATR*
Ga0070766_101149572	3300005921	Soil	MGQWLIADVSLFDVHLQLWMLLATGIMLLWFIYVWATRLR*
Ga0075023_1005349831	3300006041	Watersheds	MGQWLIADLSVSDVHFQLWMLLVTAILLIWFAFVWATRHVR*
Ga0075024_1008211011	3300006047	Watersheds	MGRWLVADLSVMDVHFQLWMVLVTGILLVWFLFVWATRHVR*
Ga0075028_1010308562	3300006050	Watersheds	MATMAEWLIADVPLLGVHLQLWMLLVTSVVLIWFVYVWATR*
Ga0075029_1002746742	3300006052	Watersheds	MGQWLIADLSVSDVHFQFWMLLVAGVILFWFLYVWATR*
Ga0075026_1002719912	3300006057	Watersheds	MGQWLIADLSVSDVHFQFWMLLVTAILLVWFAFVWATRHVR*
Ga0075017_1002270042	3300006059	Watersheds	MGQWLIADLSVSDVHFQLWMLLVTGFILLWFVYVWATR*
Ga0075017_1003474564	3300006059	Watersheds	MGRWLIADLSILDVHFQAWMLLVTGIILLWFLYVWATRQHR*
Ga0075017_1005682481	3300006059	Watersheds	MEHWLIVDITFLDVHLQLWMLLVTAIMSLWFVYVWVTL*
Ga0075019_102970791	3300006086	Watersheds	DTMGQWLAADLSVMDVHLQIWMVLVTAILLVWFAFVSATRQVR*
Ga0075018_106232651	3300006172	Watersheds	MAQWLIADISLLDVHVHLWMLLVTGIILLWFLYVWATR*
Ga0075014_1000215841	3300006174	Watersheds	MGQWLAADLSVMDVHLQIWMVLVTAILLVWFAFVS
Ga0075014_1003344632	3300006174	Watersheds	MGRWLIADLSILDVHFQAWMLLVTGIILLWFLYVWATR*
Ga0075014_1003822713	3300006174	Watersheds	WLIADVSLFDVHVQLWMLFATSIMLLWFIYVWATRLR*
Ga0075021_102542692	3300006354	Watersheds	MGRWLVADLSVMDVHFQLWMVLVTGILLVWFLFVWATRQVR*
Ga0074062_104029172	3300006606	Soil	MGQWLIADVSLFDVHLQLWMLFATGIILLWFIYVWATRLR*
Ga0073928_109407161	3300006893	Iron-Sulfur Acid Spring	MGQWLIADVSLFDVHLQLWMLFATGIMLLWFLYVWATRSRP
Ga0105245_122466282	3300009098	Miscanthus Rhizosphere	MGQWLITDVWVSNVHFQLWMLLVATVLFLWFVYVWATR*
Ga0116214_12923102	3300009520	Peatlands Soil	MGEWLIADLSILDVHVQAWMLLVAGFFLLWLLYVCL*
Ga0116222_10408301	3300009521	Peatlands Soil	MGEWLVADLSILDVHFQAWMVLVTGFFLLWLLYAWRQAR*
Ga0116218_10259903	3300009522	Peatlands Soil	MGQWLIADLSVSDVHVQLWMLLVTGIVLLWFLYVWATR*
Ga0116218_14349071	3300009522	Peatlands Soil	MEIGKMTQWLIADITFLDVHLQLWLLLVTGIISLWFVYVWATR*
Ga0116218_15125421	3300009522	Peatlands Soil	AQWLIADISLLDVHAHLWMLLVTGIISIWFLYVWATRSRP*
Ga0116220_101272461	3300009525	Peatlands Soil	MGEWLVADLSILDVHFQAWMLLVTGFFLLWLLYAWRQAR*
Ga0116217_108833252	3300009700	Peatlands Soil	KMTQWLIADITFLDVHLQLWMLLVTGIISLWFVYVWATR*
Ga0126384_105895502	3300010046	Tropical Forest Soil	MGQWLIADVSLFDVHVQVWMLLVTAVVLLWFIYVWATR*
Ga0126373_109190132	3300010048	Tropical Forest Soil	MREWLLADLSVMDVHFQLWMVLITAILLVWFLFVWATRHVR*
Ga0126373_120972402	3300010048	Tropical Forest Soil	MREWLAADISVMDVHFQLWMVLVAAFLLGWFALVWATRHVR*
Ga0074046_104804762	3300010339	Bog Forest Soil	MAQWLIADISLLDVHLQLWMLLVASFILLWFAYVWATR*
Ga0126376_115558823	3300010359	Tropical Forest Soil	VADLSVMDVHFKLWMVLVAAILLIWFAFVWATRHVR*
Ga0126372_126511801	3300010360	Tropical Forest Soil	MGQWLIADVSLFDVHVQVWMLLVTAVILLWFIYVWATR*
Ga0126378_109007972	3300010361	Tropical Forest Soil	MRDLLVADLSVMDVHFQLWMVLVAAILLIWFAFVWATRHVR*
Ga0126377_130471981	3300010362	Tropical Forest Soil	MRDLLVADLSVMDVHFQLWMVLVTAILLIVWATRH
Ga0126379_126001271	3300010366	Tropical Forest Soil	MGQWLIADLSVSDVHFQLWMVLVTVILLIWFAFVWTTRHVR*
Ga0134125_123181231	3300010371	Terrestrial Soil	MAQWLIADIAFLDVHLQLWMLLVTGIISLWFAYVWATR*
Ga0126381_1014759161	3300010376	Tropical Forest Soil	MRELLAADISVMDVHFQLWMVLVAAFLLGWFALVWATRHVR*
Ga0126381_1016567731	3300010376	Tropical Forest Soil	MRGLLIADLSVMNVHFQLWMVLVTAILLIWFAFVWATRHVR*
Ga0126381_1019094114	3300010376	Tropical Forest Soil	DLLVADLSVMDVHFQLWMVLVAAILLIWFAFVWATRHVR*
Ga0126381_1027709062	3300010376	Tropical Forest Soil	MREWLLADLSVMDVHFQLWMVLVTAILLVWFLFVWATRHVR*
Ga0126381_1032418751	3300010376	Tropical Forest Soil	GRNMRDLLVADLSVMDVHFQLWMVLVTAILLIWFAFVWATRPVR*
Ga0126381_1034911051	3300010376	Tropical Forest Soil	MGQWLVADFSLLEVHVQLWILLFTGIILFWLIYVWATR*
Ga0136449_1006450641	3300010379	Peatlands Soil	MGQWLIADISVLDVHFHLWMLLVTGIMLLWFVYVWATR*
Ga0136449_1006690342	3300010379	Peatlands Soil	MEIGKMTQWLIADITFLDVHLQLWMLLVTGIISLWFVYVWATR*
Ga0136449_1007580002	3300010379	Peatlands Soil	MAQWLIADISLLDVHAHLWMLLVTGIISIWFLYVWATRSRP*
Ga0136449_1011272591	3300010379	Peatlands Soil	MGEWLIADISLLEIHFQAWMLLVTGIFLLWLLYAWRQAQ*
Ga0136449_1013072182	3300010379	Peatlands Soil	MGEWLIADVSLLDVHCQLWMLLVTSFVFLWFLYVWATR*
Ga0136449_1013857143	3300010379	Peatlands Soil	MAEWLIADVPLFDVHLQVWMLLVTGAVLIWFVYVWVTR*
Ga0136449_1034567542	3300010379	Peatlands Soil	MAEWLTADVPVFDVHLQVWMLLVAGVLLCWLGYVWATRSMN*
Ga0136449_1036633671	3300010379	Peatlands Soil	MGQWLIADLSVSEVHFPLWMLLVTGIIFLWFVYVWATR*
Ga0126383_124862102	3300010398	Tropical Forest Soil	MRDLLVADLSVMDVHFQLWMVLVTAILLIWFAFVWATRHVR*
Ga0126383_125521222	3300010398	Tropical Forest Soil	DLLVADLSVMNVHFQLWMVLVTAILLIWFAFVWATRPVR*
Ga0150983_115763592	3300011120	Forest Soil	MGQWLIADVSLLDIHLQLWMLLVTGIMLLWIIYVWATQLR*
Ga0150983_148099632	3300011120	Forest Soil	MGQWLVADLSGMDVHFQLWMVLVTAILLVWFAFVWATRHVR*
Ga0153943_11359831	3300012177	Attine Ant Fungus Gardens	MGQWLIADLSFLDVHVQLWMTLVTLVILLWLFYVWATRR
Ga0153922_11756421	3300012181	Attine Ant Fungus Gardens	MGQWLITDLSVLDIHLPLWMLLVATLILLWFVYVWATR*
Ga0164299_105002551	3300012958	Soil	QMGQWLIADVSLFDVHLHLWMLLVTGIISLSFLYVWATRSRP*
Ga0126369_129974741	3300012971	Tropical Forest Soil	MRGLLIADLSVMNVHFQLWMVLVTAILLIWFAFVWATRPVR*
Ga0164305_104528493	3300012989	Soil	MGQCLIADVSLFDVHLQLWMLFATGIMLLWFIYVWATRLR*
Ga0181531_105550013	3300014169	Bog	MGEWLIADVSFLDVHLQLWMLLVTAIVLVWLMYAWATR*
Ga0181537_102036643	3300014201	Bog	MGEWLIADVPLFNVHLQLWMLLVTAFILLWLAYVWATRSR*
Ga0181525_102852602	3300014654	Bog	MGEWLIADVSLLDVHLQLWMLLVTAIVLVWLMYAWATR*
Ga0132258_114232233	3300015371	Arabidopsis Rhizosphere	MRQWVVADLSVMDVHFQLWMVLVTAILLVWFAFVWATRHVR*
Ga0182036_103227502	3300016270	Soil	MGQWLIADVSLFGVHVQFWMLLVTAVFLLWFIYVWATR
Ga0182036_115087381	3300016270	Soil	MGQWLVADLSVMDVHFQLWMVLVAVILLVWFAHVWATRHVR
Ga0182041_109349531	3300016294	Soil	CARSKGASMGQWLIADVSLFDVHVQVWMLLVTAVVLFWFIYVWATR
Ga0182041_123056532	3300016294	Soil	MGQWLIADVSLFDVHVQVWMLLVTAVVLLWFIYVWATR
Ga0182035_113192191	3300016341	Soil	MREWLVADLSVMDVHFQLWMVLVTAILLVWFLFVWATRHVR
Ga0182035_117303281	3300016341	Soil	MGQWLIADVSLFDVHVQVWMLLVTAVVLFWFIYVWATR
Ga0182032_106862892	3300016357	Soil	MGQWLIADVSLFGVHVQFWMLLVAAVFLLWFIYVWATR
Ga0182032_107924041	3300016357	Soil	MRELLAADISVMDVHFQLWMVLVAAFLLGWFALVWATRHVR
Ga0182034_111059121	3300016371	Soil	MGQWLIADVSLLDIHLQLWMLLVTGVMLLWIIYVWATQ
Ga0182034_113173752	3300016371	Soil	MGQWLIADVSFLDVHVQLWMLLVVGVLLIWLAAVWVMR
Ga0182040_116018421	3300016387	Soil	MRQWLLADFSFLDVHVQLWMVVVTVVILLWLFYVWATRKP
Ga0182040_116031311	3300016387	Soil	MRQWLIADVSFLDVHVQLWMVLVVMVFLLWFFYVWANRKP
Ga0182037_113060861	3300016404	Soil	GRDMRDLLVADLSVMDVHFQLRMVRVTAILLIWFAFVWATRPFR
Ga0182037_115905152	3300016404	Soil	MGQWLIADVPFLDVHVQLWMVLVVMVFLLWFFYVWATRKP
Ga0182038_102203331	3300016445	Soil	WLIADVSLLDIHLQLWMLLVTGIMLLLIIYVWATRLR
Ga0187802_102230671	3300017822	Freshwater Sediment	MGQWLIADLSVSDVHFQLWMLLVTGFILLWFVYVWATR
Ga0187801_100191203	3300017933	Freshwater Sediment	MGQWLIADLSILDVHFQAWMLLVTGIILLWFLYVWATR
Ga0187801_100576743	3300017933	Freshwater Sediment	MGEWLVADLSILDVHFQAWMLLVTGFFLLWLLYAWRQAR
Ga0187821_103139792	3300017936	Freshwater Sediment	VERVNVTRHSPVWFGRGNMGQWLVADLSVMDVHFQLWMVLVTGILLVWFLFVWATRHVR
Ga0187819_106976612	3300017943	Freshwater Sediment	MGQWLIADLSVSDVHVQLWMLLVTGIVLLWFLYVWATR
Ga0187879_100988561	3300017946	Peatland	MGEWLIADLSVLDVHFQAWMLLVVGIVLLWFLYVWATR
Ga0187817_103088882	3300017955	Freshwater Sediment	LVADLSILDVHFQAWMLLVTGFFLLWLLYAWRQAR
Ga0187817_104196591	3300017955	Freshwater Sediment	MGQWLITDLSVSDIHFQLWMLLVTAFILLWFLYVWGTRLR
Ga0187817_107500962	3300017955	Freshwater Sediment	MGQWLIADLFSVSDVHVQLWMLLVTGIVFLWFLYVWATR
Ga0187783_101597355	3300017970	Tropical Peatland	MRDLLVADLSVMDVHFQLWMALVTAILLIWFAFVWATRPVR
Ga0187783_102384801	3300017970	Tropical Peatland	PARVVPMVQWLIADVPLLSVPLQLWMLFVAAFVVAWFFYVWATG
Ga0187783_104071922	3300017970	Tropical Peatland	MGQLLIADVSVMDVHFQLWMVLVTVILLIWFAFVWTTRHVR
Ga0187783_108851511	3300017970	Tropical Peatland	MGEWLIADVPLFGVHLQLWMLLVTGALLVWFLYGWATRER
Ga0187781_111177722	3300017972	Tropical Peatland	MGEWLIADVPLFGVHLQLWMLLVTGCLFLWFLYGWVTRER
Ga0187777_102281321	3300017974	Tropical Peatland	MGQWLIADLSVMDVHFQLWMVLVTVILLVWFAFVWATRHVR
Ga0187782_114897652	3300017975	Tropical Peatland	MGQWLIADLSFFDTHFQLWMLLFAGLILAWFLYVWAMR
Ga0187816_105472682	3300017995	Freshwater Sediment	MAQWLIADITFLDVHLQLWMLLVTGIISLWFVYVWATR
Ga0187805_103167341	3300018007	Freshwater Sediment	MGQGQWLITDLSVSDVHVQLWMLLVTSIVLLWFLY
Ga0187772_101876093	3300018085	Tropical Peatland	MGQWLAADLSVMDVHFQVWMVLVAVILLVWFAFVWATRDIR
Ga0187772_105711681	3300018085	Tropical Peatland	VADAHQEATMGQWLIADLSVADVHVQPWMLLVTGIILLWFLYVWATR
Ga0210407_109064341	3300020579	Soil	MGQWLIADVSLFDVHLQLWMLFATGIMLLWFIYVWATRLR
Ga0210407_109397902	3300020579	Soil	MGQWLIADLSVSDVHFQFWMLLVAGVILFWFLYVWATR
Ga0210395_104311961	3300020582	Soil	MTQWLIADITCLDVHLQLWMLLVTGIISLWFVYVWATR
Ga0210401_106391302	3300020583	Soil	WLIADVSLFDVHLQLWMLFATGIMLLWFIYVWATRLR
Ga0210401_106417041	3300020583	Soil	MGQWLIADVSLLDVHLQLWMLLVIGIMLLWIIYVWATQLR
Ga0210401_107166701	3300020583	Soil	MGQWLVADLSGMDVHFQLWMVLVTAILLVWFAFVWATRHVR
Ga0210400_100914903	3300021170	Soil	MGHWLIADVSPLNVHVQLWMLLVIGIMLLWIIYVWASNCV
Ga0210405_104913592	3300021171	Soil	MGQWLITDLSVLDIHLPLWMLLVATLILLWFVYVWATR
Ga0210408_110100942	3300021178	Soil	MGQWLIADLSFLDIHLQLWMLLVAGVVLLWFLYVWATR
Ga0210396_101897141	3300021180	Soil	SDGDYQVGRWLIADVSLLDVHLQLWMLLVIGIMLLWIIYVSAMQLR
Ga0210393_104012282	3300021401	Soil	MGQWLIADLSVSDVHFQLVMLLVTGIILLWFAYVWATRWRSRRWLELLYH
Ga0210387_102925873	3300021405	Soil	MGQWLIADLSVSDVHFHLWMLLVTGIVLLWFVYVWATRWRSRRWLELLYH
Ga0210387_107821653	3300021405	Soil	MGQWLIADVSLFDVHVQLWMLFATGIMLLWFIYVWATRLR
Ga0210387_113792392	3300021405	Soil	MGQWLIADLWVSEVHFQLWVLLVTGFILLWFVYVWATR
Ga0210383_105443291	3300021407	Soil	MGQWLIADVSLFDVHLQLWMLFATGIMLLWFIYVWAT
Ga0210383_110951471	3300021407	Soil	MGQWLIADVSLLDVHLQLWMLLVTGIMLLWIIYVWATQLR
Ga0210383_116209111	3300021407	Soil	MGQWLIADLSVSDVHFQLWMLLVAGIIFFWFVYVWATR
Ga0210394_103595065	3300021420	Soil	MGQWLIADVSVFDVHLQLWMLLATGIMLLWFIYVWATRLR
Ga0210391_109532151	3300021433	Soil	MGQWLIADVSLFDIHLQLWMLFATGIMLLWFIYVWATRLR
Ga0210390_110069751	3300021474	Soil	MTQWLIADITFLDVHLQLWMLLVTGIISLWFVCVWATR
Ga0126371_104224232	3300021560	Tropical Forest Soil	MGQWLIADVSFLDVHIQLWMLLVVGVLLIWLAAVGATR
Ga0126371_114711291	3300021560	Tropical Forest Soil	MREWLAADISVMDVHFQLWMVLVAAFLLGWFALVWATRHVR
Ga0242644_10434181	3300022498	Soil	MAQWLIADISLLDLHAHLWMLLVTGIILLWFLYVWATRSRPQT
Ga0242644_10467711	3300022498	Soil	MEHCLIVDITFLDVHLQLWMLLVTAIMSLWFVYVWVTL
Ga0222728_11077002	3300022508	Soil	MGQWLIADVSLLDIHLQLWMLLVTGIMLLRIIYVWAT
Ga0242662_100747422	3300022533	Soil	MGQWLIADVSLLDIHLQLWMLLVTGIMLLWIIYVWAT
Ga0242662_103125921	3300022533	Soil	MGQWLIADVSLLGVHLQLWMLLVTGIMLLWIIYVRATKLH
Ga0222756_10441852	3300022709	Soil	MAQWLIADISLLDVHAHLWMLLVTGIILLWFLYVWATRSRPQT
Ga0242678_10271481	3300022715	Soil	MEHWLIVDITFLDVHLQLWMLLVTAIMSLWFVYVWVTR
Ga0242665_101579851	3300022724	Soil	VGRWLIADVSLLDVPLQLWMLLVIGIMLLWIIYVSAMQLR
Ga0207706_102008161	3300025933	Corn Rhizosphere	MAQWLIADVSLFDVHVQVWMLLVAGIFLSWFFFVWRQPH
Ga0207949_10113971	3300026999	Forest Soil	REGDQQMGQWLIADVSLFDVHLQLWMLFATGIMLLWFIYVWATRLR
Ga0208324_10387931	3300027604	Peatlands Soil	MGEWLVADLSILDVHFQAWMVLVTGFFLLWLLYAWRQAR
Ga0208324_11389901	3300027604	Peatlands Soil	MGEWLIADLSILDVHVQAWMLLVAGFFLLWLLYVCL
Ga0209167_107718711	3300027867	Surface Soil	MAEWLIADVPLFNIHVQLWMLLVTGLVLIWFLYAWVTR
Ga0209068_108316641	3300027894	Watersheds	MGQWLIADLSVSDVHFQFWMLLVTAILLVWFAFVWATRHVR
Ga0209067_105438312	3300027898	Watersheds	MGRWLVADLSVMDVHFQLWMVLVTGILLVWFLFVWATRHVR
Ga0209067_106297891	3300027898	Watersheds	TMGQWLIADLSVSDVHVQLWMLLVTGIVLLWFLYVWATR
Ga0209006_102377092	3300027908	Forest Soil	MAQWLIADISLLDVHVHLWMLLVTGIISLWFLYVWATRSRP
Ga0209583_102156111	3300027910	Watersheds	MGQWLIADLSVSDVHFQLWMLLVTAILLIWFAFVWATRHVR
Ga0209583_105192301	3300027910	Watersheds	MATMAEWLIADVPLLGVHLQLWMLLVTGIVLLWFLYVWATR
Ga0311339_101204123	3300029999	Palsa	MGEWLIADVPLFNVHLQLWMLLVTGFILLWFAHVWTTRLR
Ga0311339_103457581	3300029999	Palsa	MGEWLIADVSLLDVHLQLWMLLVTAIVLVWLMYAW
Ga0311370_113517661	3300030503	Palsa	MGEWLIADVSLLDVHLQLWMLLVTAIVLVWLMYAWATR
Ga0311370_117024462	3300030503	Palsa	MREWLIADVSLFDVHLQLWMLLVTGAVLVWFVYVWATR
Ga0311357_113788963	3300030524	Palsa	MGEWLIADVPLFNVHLQLWMLLVTGFILLWFAHVWTT
Ga0310038_100700583	3300030707	Peatlands Soil	MGQWLIADLSVSDVHVQLWMLLVTGIMLLWFLYVWATR
Ga0170824_1049219042	3300031231	Forest Soil	MGQWLIADFSVSDDHFQLWMLLVATVILVWFAYVWKTRSR
Ga0310686_1053807413	3300031708	Soil	MAEWLITDISLLDVYFQVWMLLVLGILLCWFMFVWATRSVH
Ga0310686_1084422252	3300031708	Soil	MGQWLIADLSVADVHFQPWMLLVTGVVVFWFLYVWATR
Ga0310686_1125083391	3300031708	Soil	TGLSVMDVHFQLWMALVAGFLLAWFVLVWTTRHAR
Ga0310686_1127841673	3300031708	Soil	MAQWLIADISLLDVHVHLWMLLVTGIILLWFLYVWATR
Ga0310686_1190141663	3300031708	Soil	MGQWLVADLSVMDVHFQVWMVLVTAILLVWFAFVSATRQVR
Ga0306917_113722081	3300031719	Soil	MGQWLIADVSLFGVHLQFWMLLVTAVFLLWFIYVWATR
Ga0247548_1066451	3300031814	Soil	MAEWLITDISLLDVYFQVWMLLVLGILLCWFMFVWA
Ga0307478_107410921	3300031823	Hardwood Forest Soil	MGQWLIADIALLDAHLQLWMVLVTGIILLWFIYVCATR
Ga0306925_107557783	3300031890	Soil	MRQWLIADVSFLDIHLQLWMLLVAGVVLLWCLYVWATR
Ga0306925_121460682	3300031890	Soil	IADVSFLDVHVQLWMVLVVMVFLLWFFYVWANRKP
Ga0306924_114454541	3300032076	Soil	MGQWLIADVSLFDVHVQVWMLLVTAVILLWFIYVWATR
Ga0311301_102583592	3300032160	Peatlands Soil	MGQWLIADISVLDVHFHLWMLLVTGIMLLWFVYVWATR
Ga0311301_103200145	3300032160	Peatlands Soil	MAEWLIADVPLFDVHLQVWMLLVTGAVLIWFVYVWVTR
Ga0311301_107446802	3300032160	Peatlands Soil	MAQWLIADISLLDVHAHLWMLLVTGIISIWFLYVWATRSRP
Ga0311301_111816392	3300032160	Peatlands Soil	MTQWLIANITFLDVHLQLWMLLVTGIISLWFVYVWATR
Ga0311301_114609772	3300032160	Peatlands Soil	MAEWLIADVPVFDVHLQVWMLLVAGVLLCWLGYVWATRSMN
Ga0311301_124624691	3300032160	Peatlands Soil	MGEWLIADVSLLDVHCQLWMLLVTSFVFLWFLYVWATR
Ga0307471_1029402781	3300032180	Hardwood Forest Soil	VWFGRGNMGRWLVADLSVMDVHFQLWMVLVTGILLVWFLFVWATRHVR
Ga0306920_1028804423	3300032261	Soil	MGQWLITDPSVSDVHFQLWMLLLAAFILLWFVYVWATR
Ga0335074_101455041	3300032895	Soil	MAEWLIADITLRGVHLQVWTLLVAGFMVVWFLYAWATR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F031229

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences