Metagenome / Metatranscriptome Family F031185

Basic Information
Family ID	F031185
Family Type	Metagenome / Metatranscriptome
Number of Sequences	183
Average Sequence Length	59 residues
Representative Sequence	MLKTLIIATVLLPTLALAQRSQQLPQPRQPGQWCPVGWMASGNYCVPGSDKAPAAI
Number of Associated Samples	111
Number of Associated Scaffolds	183

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	40.66 %
% of genes near scaffold ends (potentially truncated)	73.22 %
% of genes from short scaffolds (< 2000 bps)	95.08 %
Associated GOLD sequencing projects	104
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Bacteria (57.923 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (29.508 % of family members)
Environment Ontology (ENVO)	Unclassified (47.541 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (60.656 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124. 1AF_2010_repII_A100DRAFT_10078687 2JGI1027J12803_1059848283 3JGIcombinedJ51221_102382511 4Ga0062595_1011345873 5Ga0066684_101194184 6Ga0066388_1001839444 7Ga0066388_1005044641 8Ga0066388_1010441092 9Ga0066388_1026466022 10Ga0066388_1026786543 11Ga0066388_1044034351 12Ga0066388_1044528002 13Ga0066388_1053081611 14Ga0066388_1057307371 15Ga0066388_1064455311 16Ga0066388_1080349162 17Ga0066388_1088156261 18Ga0008090_102426605 19Ga0066687_107934021 20Ga0066687_108862821 21Ga0070696_1007668962 22Ga0066707_108381511 23Ga0066698_105909531 24Ga0066693_100308473 25Ga0066708_102558664 26Ga0066691_107816151 27Ga0066905_1001771854 28Ga0066905_1004925791 29Ga0066905_1005197591 30Ga0066905_1009630533 31Ga0066905_1012677072 32Ga0066905_1015518271 33Ga0066905_1019623221 34Ga0066905_1022952662 35Ga0066903_1002730077 36Ga0066903_1017460613 37Ga0066903_1023647072 38Ga0066903_1024172773 39Ga0066903_1024229831 40Ga0066903_1036166692 41Ga0066903_1039221972 42Ga0066903_1051346412 43Ga0066903_1057547672 44Ga0066903_1060512551 45Ga0066903_1087430361 46Ga0066696_106597133 47Ga0070712_1003919234 48Ga0066660_110465063 49Ga0075428_1001155516 50Ga0075431_1010016683 51Ga0075433_108795433 52Ga0075434_1020870801 53Ga0075426_105027901 54Ga0075419_114711752 55Ga0099828_106908321 56Ga0111539_132746761 57Ga0075418_111141153 58Ga0066709_1023432913 59Ga0114129_118388401 60Ga0126374_103849011 61Ga0126380_104982351 62Ga0126380_110831442 63Ga0126380_117095712 64Ga0126384_112695512 65Ga0126382_120241581 66Ga0126382_124242252 67Ga0126373_108754594 68Ga0134084_104352973 69Ga0126378_107696932 70Ga0126378_122747372 71Ga0126378_133789181 72Ga0126377_132260952 73Ga0126377_132839911 74Ga0126377_136121101 75Ga0126379_107581362 76Ga0126379_108417601 77Ga0126379_113231081 78Ga0126379_118386361 79Ga0126381_1006986271 80Ga0126383_116672753 81Ga0126383_120382771 82Ga0137382_104382953 83Ga0137382_109393061 84Ga0137370_102356861 85Ga0137407_107940083 86Ga0126369_107016302 87Ga0126369_118732482 88Ga0126369_128094071 89Ga0132255_1036100252 90Ga0182036_101576602 91Ga0182036_110867262 92Ga0182036_111798823 93Ga0182041_103096991 94Ga0182041_108685221 95Ga0182033_121240633 96Ga0182035_110043811 97Ga0182035_110177392 98Ga0182035_121964481 99Ga0182032_113097711 100Ga0182032_114044822 101Ga0182034_102947961 102Ga0182034_109556751 103Ga0182034_113591323 104Ga0182040_102118691 105Ga0182040_107377334 106Ga0066669_100267063 107Ga0126371_101614666 108Ga0126371_123952641 109Ga0126371_123963832 110Ga0209237_11090753 111Ga0209577_104355502 112Ga0318541_100573386 113Ga0318541_107334491 114Ga0318571_102311412 115Ga0318528_107082291 116Ga0318573_102380302 117Ga0310915_103404043 118Ga0318542_102317763 119Ga0318574_105392131 120Ga0318572_102912361 121Ga0318496_101819112 122Ga0306917_104094554 123Ga0306917_108354862 124Ga0306917_111879261 125Ga0307469_118050921 126Ga0306918_103654844 127Ga0306918_105359244 128Ga0306918_106396273 129Ga0306918_109065862 130Ga0318535_103871991 131Ga0318554_107892751 132Ga0318521_100723334 133Ga0318546_102192561 134Ga0318543_103433291 135Ga0318543_103707193 136Ga0318508_11836371 137Ga0318547_101866133 138Ga0318552_102503373 139Ga0318548_100484741 140Ga0318550_100639001 141Ga0318523_102969361 142Ga0318564_104057491 143Ga0318499_103154442 144Ga0310917_105814182 145Ga0318511_102224952 146Ga0318495_100987732 147Ga0306919_105629631 148Ga0306919_115005013 149Ga0306925_105606253 150Ga0318551_103375921 151Ga0318520_100307276 152Ga0318520_102833371 153Ga0318520_109885521 154Ga0306921_108019931 155Ga0306921_125971571 156Ga0310912_102904753 157Ga0310912_113789361 158Ga0310913_102585431 159Ga0310910_108333781 160Ga0318531_102297541 161Ga0318531_105551061 162Ga0306922_107649141 163Ga0306922_119199681 164Ga0318569_100542921 165Ga0318569_101571521 166Ga0310911_107092061 167Ga0310911_108658821 168Ga0318545_100790453 169Ga0318558_103817982 170Ga0318506_105058742 171Ga0318575_103275871 172Ga0318505_101017355 173Ga0318504_102506831 174Ga0318514_105269433 175Ga0318553_103070521 176Ga0306924_116874612 177Ga0306924_122626811 178Ga0318525_102468752 179Ga0318577_105703632 180Ga0306920_1014746793 181Ga0310914_105827503 182Ga0310914_112047832 183Ga0318519_108133031
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124. 1AF_2010_repII_A100DRAFT_10078687 2JGI1027J12803_1059848283 3JGIcombinedJ51221_102382511 4Ga0062595_1011345873 5Ga0066684_101194184 6Ga0066388_1010441092 7Ga0066388_1026786543 8Ga0066388_1064455311 9Ga0066388_1088156261 10Ga0066707_108381511 11Ga0066708_102558664 12Ga0066905_1001771854 13Ga0066905_1004925791 14Ga0066905_1005197591 15Ga0066905_1009630533 16Ga0066905_1012677072 17Ga0066905_1022952662 18Ga0066903_1023647072 19Ga0066903_1039221972 20Ga0075431_1010016683 21Ga0111539_132746761 22Ga0114129_118388401 23Ga0126378_133789181 24Ga0126377_132260952 25Ga0126377_132839911 26Ga0182036_101576602 27Ga0182034_109556751 28Ga0318571_102311412 29Ga0310912_113789361 30Ga0306924_122626811
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56 1Ga0318496_101819112 2JGI1027J12803_1059848283 3Ga0066388_1010441092 4Ga0066388_1026466022 5Ga0066388_1044528002 6Ga0066388_1053081611 7Ga0066905_1005197591 8Ga0066905_1009630533 9Ga0066905_1012677072 10Ga0066903_1002730077 11Ga0066903_1017460613 12Ga0066903_1023647072 13Ga0066903_1039221972 14Ga0066903_1051346412 15Ga0066903_1087430361 16Ga0066696_106597133 17Ga0075431_1010016683 18Ga0075433_108795433 19Ga0111539_132746761 20Ga0114129_118388401 21Ga0126382_120241581 22Ga0126378_133789181 23Ga0126377_132839911 24Ga0126383_116672753 25Ga0137382_109393061 26Ga0137407_107940083 27Ga0126369_107016302 28Ga0126369_128094071 29Ga0182041_108685221 30Ga0182032_114044822 31Ga0182034_113591323 32Ga0182040_102118691 33Ga0126371_101614666 34Ga0318541_100573386 35Ga0307469_118050921 36Ga0318554_107892751 37Ga0318531_105551061 38Ga0306922_119199681 39Ga0318545_100790453 40Ga0306924_122626811
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 26.19% β-sheet: 9.52% Coil/Unstructured: 64.29%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Structure Viewer
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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Pfam ID	Name	% Frequency in 183 Family Scaffolds
PF02769	AIRS_C	2.19
PF12625	Arabinose_bd	1.64
PF02600	DsbB	1.09
PF02518	HATPase_c	1.09
PF13328	HD_4	0.55
PF12833	HTH_18	0.55
PF12850	Metallophos_2	0.55
PF13649	Methyltransf_25	0.55
PF14020	DUF4236	0.55
PF13185	GAF_2	0.55

COG ID	Name	Functional Category	% Frequency in 183 Family Scaffolds
COG1495	Disulfide bond formation protein DsbB	Posttranslational modification, protein turnover, chaperones [O]	1.09
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.55
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.55

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	57.92 %
Unclassified	root	N/A	42.08 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	57.92 %
Unclassified	root	N/A	42.08 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	57.92 %
Unclassified	root	N/A	42.08 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	53.55 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.55 %
Unclassified	root	N/A	42.08 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	51.37 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.55 %
Unclassified	root	N/A	42.08 %

Name	Rank	Taxonomy	Distribution
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.55 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.73 %
Unclassified	root	N/A	42.08 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	43.17 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	43.17 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.09 %
Synechococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	0.55 %
Unclassified	root	N/A	42.08 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	43.17 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.09 %
Synechococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae	0.55 %
Unclassified	root	N/A	42.08 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	43.17 %
Bradyrhizobium yuanmingense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium yuanmingense	1.09 %
Synechococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus	0.55 %
Unclassified	root	N/A	42.08 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	43.17 %
Bradyrhizobium yuanmingense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium yuanmingense	1.09 %
Unclassified	root	N/A	42.08 %
unclassified Synechococcus	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus → unclassified Synechococcus	0.55 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	43.17 %
Bradyrhizobium yuanmingense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium yuanmingense	1.09 %
Synechococcus sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus → unclassified Synechococcus → Synechococcus sp.	0.55 %
Unclassified	root	N/A	42.08 %

Visualization
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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000655\|AF_2010_repII_A100DRAFT_1007868	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2042	Open in IMG/M
3300000955\|JGI1027J12803_105984828	All Organisms → cellular organisms → Bacteria → Proteobacteria	946	Open in IMG/M
3300003505\|JGIcombinedJ51221_10238251	Not Available	739	Open in IMG/M
3300004479\|Ga0062595_101134587	Not Available	687	Open in IMG/M
3300005179\|Ga0066684_10119418	Not Available	1639	Open in IMG/M
3300005332\|Ga0066388_100183944	All Organisms → cellular organisms → Bacteria	2700	Open in IMG/M
3300005332\|Ga0066388_100504464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium yuanmingense	1845	Open in IMG/M
3300005332\|Ga0066388_101044109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1375	Open in IMG/M
3300005332\|Ga0066388_102646602	All Organisms → cellular organisms → Bacteria → Proteobacteria	914	Open in IMG/M
3300005332\|Ga0066388_102678654	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	909	Open in IMG/M

Showing 1 to 10 of 182 entries

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Habitat	Taxonomy	Distribution
Environmental	Environmental	94.54%
Host-Associated	Host-Associated	5.46%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	5.46%
Terrestrial	Environmental → Terrestrial	94.54%

Habitat	Taxonomy	Distribution
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.55%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.92%
Soil	Environmental → Terrestrial → Soil	94.54%

Habitat	Taxonomy	Distribution
Loam	Environmental → Terrestrial → Soil → Loam	18.58%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	75.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.55%

Habitat	Taxonomy	Distribution
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.55%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.09%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	48.63%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	17.49%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.20%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.55%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.55%

Habitat	Taxonomy	Distribution
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.55%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.09%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.55%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.55%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.64%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.55%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.55%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	29.51%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.55%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	16.94%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	14.75%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.55%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.73%

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A100DRAFT_10078687	3300000655	Forest Soil	MLKTLIIATVLLPTLAFAQRPQQLPQPRQPGQWCPVGWIASGSYCVPGSDKAPA
JGI1027J12803_1059848283	3300000955	Soil	MLKSLILATALLPSLSFAQSQQLPQPRRPGQWCPEGWSASGSYCVPGSDKASPAIPKTHN
JGIcombinedJ51221_102382511	3300003505	Forest Soil	MLKTLIIVTVLLPRLAFAQQSQQLPQPRQPGQWCPVGWVASGNYCVPGSDKAPAAIPKKGWCPAGWRES
Ga0062595_1011345873	3300004479	Soil	VLLPTVVIAQQSQQLPQPRQPGQWCPVGWVASGSHCVPGSDKAPAAIPKNG
Ga0066684_101194184	3300005179	Soil	MLKTLIIATVLLPRLAIAQQSQQLPQPGGWMASGSYCVPGSKKAPAAIPKKDWCPAGWRESGSYCIR*
Ga0066388_1001839444	3300005332	Tropical Forest Soil	MLKTLIIATVLLPTLAVAQRSQQLPQPRQPGQWCPVGWMASGNYCVPGSDKASVLAQIAGVNHA*
Ga0066388_1005044641	3300005332	Tropical Forest Soil	MLKTLIIATVLLPTLAFGQRTQQLPQPRQPGQWCPVGWMASGNYCVPGSDKAPAA
Ga0066388_1010441092	3300005332	Tropical Forest Soil	MPKTLIIATVLLPRLTIAQQFQQLPQSRHLVGWMASGSYYVPSDKAPATIAGSRESGNYCIH*
Ga0066388_1026466022	3300005332	Tropical Forest Soil	MLKTLIIATVLLPKLAIAQQSQQLPQPTQPGQWYPMGWMASGSYCVPGSDKAPAAIPKKGWYPAAWRESGSYCIR*
Ga0066388_1026786543	3300005332	Tropical Forest Soil	MLKTLIIATVLLPRLAITQQQQLPQPRQPCPVGWMASGSYCVPGSDKAPAEAKPSDDRLMVHS*
Ga0066388_1044034351	3300005332	Tropical Forest Soil	MLKTLIIAVVLLPSLALAQRSQQLPQPRQPGQWCPVGWMASGSYCVPGSDKAP
Ga0066388_1044528002	3300005332	Tropical Forest Soil	MLKTLIIATVLLPTFAIAQRSQQLPQPRLPSQWCPTGWMASGSYCVPGSDKAPAAI
Ga0066388_1053081611	3300005332	Tropical Forest Soil	MLKTLIIAMVLLPRLVIAQQSQQLPQPRQPGQWCPVGWVASGNYCVAGFDKAP*
Ga0066388_1057307371	3300005332	Tropical Forest Soil	MLKTLIIATVLLPSLALAQRSQQLPQPRQPGQWCPVGWMASGNYCVTGSDKAPAAIP
Ga0066388_1064455311	3300005332	Tropical Forest Soil	AIVLLPRLTIAQQSHQLPQPGGWMASGSYCVSGSDKAPKAVQSHSLKSYGDPRL*
Ga0066388_1080349162	3300005332	Tropical Forest Soil	MLKTLIIATVLLPTLAIAQRSQQLPQPRQPGQWCPVGWMTSGNYCVPGSDNAPAAIPKN
Ga0066388_1088156261	3300005332	Tropical Forest Soil	VLKTLIIATMLLPRLAITQQSQQLPQPREPGQWCPVGWMASGEYSVPGSDKAPAAITKKG
Ga0008090_102426605	3300005363	Tropical Rainforest Soil	MLKTLIIATVLLPKLAIAEQSQPLPQPRQPGQWCPVGWMASGSYCVPGSDKAPAAIPKNGWCPAG*
Ga0066687_107934021	3300005454	Soil	KTLIIATVLLPRLAIAQQSQQLPQPGGWMASGSYCVSGSDKAPSRSLKSCGDPRL*
Ga0066687_108862821	3300005454	Soil	MPKTLIIATVLLPRLAIAQQSQQLPQPGGWMASGSYCVPGSDKAPAAIPKKDWCPAGRRESGSYCIR*
Ga0070696_1007668962	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MLKTLIIATVLLPALAFAQQQPPQPRRPGEWCPVGWSASGNYCVPASDKAPQAVPK
Ga0066707_108381511	3300005556	Soil	MLKTLIIATVLLPALAFAQQQPPQPRRPGEWCPVGWSASGNYCVPASDKAPQAVPKKGWC
Ga0066698_105909531	3300005558	Soil	MLKTLIIATVLLPMLAFAQQSQQLPQPRQTGQWCPAGWVASGSYCVPGSDKA
Ga0066693_100308473	3300005566	Soil	MLKTLIIATVLLPRLAIAQQSQQLPQPGGWMASGSYCVPGSDKAPAAIPKKDWCPAGRRESGSYCIR*
Ga0066708_102558664	3300005576	Soil	MLKTLIIATVLLPRLAIAQQSQQLPQPGGWMASGSYCVWGSDKAPSRSLKSCGDPRL*
Ga0066691_107816151	3300005586	Soil	MLKTLIIATVLLPTLAFAQQQLPQPRRPGEWCPVGWSASGNYCVPASDKAPSRPQ*
Ga0066905_1001771854	3300005713	Tropical Forest Soil	QRSQQLPQPRQPGQWCPVGWMASGSYCVPGSDKAPAAIPKNGWCPLGYCIR*
Ga0066905_1004925791	3300005713	Tropical Forest Soil	MLKTLIIATVLLPTLAIAQRSQQLPQPRQPGQWCPVGWMESGSYCVKAPAAIPKNGWCPAGWRESGRPMADSSGSAEQMFGAE*
Ga0066905_1005197591	3300005713	Tropical Forest Soil	MLKTLIIATVLLPRLTIAQQTLPQPGQWCPAGWMASGNNCVPGSDKAPAAGRALAGA*
Ga0066905_1009630533	3300005713	Tropical Forest Soil	MLKTLIIAIVLLPRLTIAQQSQQLPQPRQAGPVGWMASGSPCVPGSDKAPAAVPKNGW*
Ga0066905_1012677072	3300005713	Tropical Forest Soil	MQKTLIIATVLLPRLTIAQQPQPLLQPRQPGQWSPVSWMASGNYCVPGSGKAPAAISKKA
Ga0066905_1015518271	3300005713	Tropical Forest Soil	KTLIIATVLLPRLTIAQQFQQLPQSRHLVGWMASGSYYVPSDKAPATIAGSRESGNYCIH
Ga0066905_1019623221	3300005713	Tropical Forest Soil	MLKTLIIATVLLPTVVIAQRTQQLPQPRQPGQWCPVGWMASGSYCVPG
Ga0066905_1022952662	3300005713	Tropical Forest Soil	MLKTLIIATVLLPRLAITQQVQQLAQPRQPCPVGWMASGSYCVPG
Ga0066903_1002730077	3300005764	Tropical Forest Soil	VLKTLIIATMLLPKLAIAQQSHQLPQPRQPGQWCPVGWMASGSYCVPGSDKAPAAI
Ga0066903_1017460613	3300005764	Tropical Forest Soil	MLKTLIIAIVLLPRLTIVQQSHQLPQRGGWMASGSYCVSGSDKTPKAVQSRSLKSCGDPRL*
Ga0066903_1023647072	3300005764	Tropical Forest Soil	MLKTLIIATVLLPRLTIAQEFQQLPQPRHPVGWMASGSYCMPGSDKAPVAIPKNGWCLPRLARERQLLHLLRVRN*
Ga0066903_1024172773	3300005764	Tropical Forest Soil	MLKSLIIATVLLPTLAVAQRSQQLPQPRQPGQWCPVGWMASGSYCVPGSGKAPAAIPKNGWCPAG
Ga0066903_1024229831	3300005764	Tropical Forest Soil	KTLIIATMLLPRLAIAQQSQQLPQPREPGQWCPVGWMASGEYGVPGSDKAPAAITKKG*
Ga0066903_1036166692	3300005764	Tropical Forest Soil	MLKTLIIATLLLPTLAFGQRYQQLPQPRQPGQWCPVGWMASGSYCVPGSDKAPAAIPKNG
Ga0066903_1039221972	3300005764	Tropical Forest Soil	MLKALIIATVLLPRLTIAQQSQQLLQPRQPGQWCPVGWMASGSYCIPGSDKARVAIAGSREGGSYCIR*
Ga0066903_1051346412	3300005764	Tropical Forest Soil	MLKTLIVAIMLPPRLTIAEQSHQLPQPGGSMASGSYCVPGSDKAPKAVQSRSLKSCGDPRL*
Ga0066903_1057547672	3300005764	Tropical Forest Soil	MLKSLIIATVLLPTLTVAQRPQQLPQPRQPGQWCPVGWMASGSYCVPGSDKAPAAIPKNG
Ga0066903_1060512551	3300005764	Tropical Forest Soil	MLKTLIIATVLLPTLAIAQRSQQLPQPGQPGQWCPVGWMASGSYCVPGSDKAPAAIPKNGWCPAGWR
Ga0066903_1087430361	3300005764	Tropical Forest Soil	MLKTLIIATVRPPRLALMQQSQQLPQPRQPGQWCPVGWIASGNYGVPGSDKAPAAIPKNGWCPA
Ga0066696_106597133	3300006032	Soil	MLKTLIIATVLLPRLVIAQQFQQLPQPGGWMASGSYCVWGSDKAPSRSLKSCGDPRL*
Ga0070712_1003919234	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MLKTLIIATMLLPRMAIAQQSQQLPQPKQPGQWCPVGWVASGSYCVPGSEKAPQAV
Ga0066660_110465063	3300006800	Soil	MPKTLIIATVLLPRLAIAQQSQQLPQPGGWMASGSYCVWGSDKAPSRSLKSCGDPRL*
Ga0075428_1001155516	3300006844	Populus Rhizosphere	MLKTLIIATVLLPRLTIAQQSQQLPQPRQSGQWCPVGWMASGSYCVPGSD
Ga0075431_1010016683	3300006847	Populus Rhizosphere	MLKTLIIATVLLPRLVTTPQSQQLPPPRQLVPLGWTASGSYCVSSPDKARLH
Ga0075433_108795433	3300006852	Populus Rhizosphere	VLKTLIIATLLLPRLAFAQQSQQLPQPRQPGQWCPVGWVASGSYCMPGSDKAPQAVPKNG
Ga0075434_1020870801	3300006871	Populus Rhizosphere	MLKTLIIATVLLPTLAFAQQQLPQPRRPGEWCPVGWSASGNYCVPASDKAPQAVPKKGWC
Ga0075426_105027901	3300006903	Populus Rhizosphere	MLKTLIIATVLLPTLAFAQQQLPQPRRPGEWCPVGWSASGNYCVPTSIR
Ga0075419_114711752	3300006969	Populus Rhizosphere	MLKTLIIATVLLPRLTIAQQPQQLPQSRQPGQWCPVGWMASGSYCVPG
Ga0099828_106908321	3300009089	Vadose Zone Soil	MLKTLIIATVLLPTLAFAQQQLPQPRRPGEWCPVGWSASANYCVPTSDKAPQAVPKKGWCPAGWRESGSYCIR*
Ga0111539_132746761	3300009094	Populus Rhizosphere	MLTLIIATMLLPRLAIAQQFQQLPQPRQAGQWCPADWVASGSYCVPGS
Ga0075418_111141153	3300009100	Populus Rhizosphere	MLKTLIIATVLLPRLTIAQQPQQLPQSRQPGQWCPVGWMASGSYCVPGSDKAPAAIPKNGWCPAGWRA
Ga0066709_1023432913	3300009137	Grasslands Soil	MLKTLIIATVLLPRLVIAQQFQQLPQPGGWMASGSYCVPGSDKAPSRSLKSCGDPRL*
Ga0114129_118388401	3300009147	Populus Rhizosphere	MLKTLIIATMLLPRLAIAQQSQQLPQPIQPGQWCPTGWTASGNYCVPGSDKARPLFPRT
Ga0126374_103849011	3300009792	Tropical Forest Soil	MLKTLIIATVLLPTLAIAQQSQQLPQPRRPGQWCPVGWMASGSYCAPGSDKAPAA
Ga0126380_104982351	3300010043	Tropical Forest Soil	MLKTLIVATVLLPTLAIAQRSQQLPQPRQPGQWCPVGSMASGNYCVPGSDKAPSATPRTV
Ga0126380_110831442	3300010043	Tropical Forest Soil	MLKTLIIATVLLPTLAFAQRSQQLPQPRQPGQWCPVGWMASGSYCVPGSDKAPAAIPKNGWCPLGYCIR*
Ga0126380_117095712	3300010043	Tropical Forest Soil	MLKTLIIATVLLPTLAIAQRSQQLPQPRQPGQWCPTGWMASGSYCVPGSD
Ga0126384_112695512	3300010046	Tropical Forest Soil	MLKTLIIATLLLPTLALAQQQLPQPRRPGEWCPVGWSASGNYCVPASD
Ga0126382_120241581	3300010047	Tropical Forest Soil	LKTLIVATVLLPRLTIAQQPQQLPKPRQPCPVGWMASGSYYVPSDKAPAAIAGTRESGNYCIR*
Ga0126382_124242252	3300010047	Tropical Forest Soil	MLKTLIIATVLLPTLAFAQRSQQLPQPRQPGQWCPAGWMASGSYCVPASDKAPAAIP
Ga0126373_108754594	3300010048	Tropical Forest Soil	MLKSLIVATVLLPTPAAAQRSQQLPQPRQPGQWCPVGWMTSGSYCVPGSDKVPAAIPKNGWCPA
Ga0134084_104352973	3300010322	Grasslands Soil	MLKTLIIATVLLPRLAIAQQSQQLPQPGGWMASGSYCVPGSDKAPAAIPKKDWCPAG
Ga0126378_107696932	3300010361	Tropical Forest Soil	MLKTLIIATVLLPTLAFAQRPQQLPQPRQPGQWCPVGWIASGSYCVPGSDKPGAARGIPSA*
Ga0126378_122747372	3300010361	Tropical Forest Soil	MLKTLIIAIVLLPRLTIVQQSHQLPQRGGWMASGSYCVSGSDKAPKAVQSRSLKSCGDPRL*
Ga0126378_133789181	3300010361	Tropical Forest Soil	MKMLAIIGAIVLLPMLALAQQSQLPQPRKPGQWCPEGWSANGNYCVPASDKARLAIPKNGWCPVG*
Ga0126377_132260952	3300010362	Tropical Forest Soil	MLHRVAISMLKTLIIATLLLPTLALAQRSQQLPQPRQPGQWCPVGSMASGNHCLPGSDKAPAAIPKNGWCPAGWRDSYCIR*
Ga0126377_132839911	3300010362	Tropical Forest Soil	VLKSLIIATVLLPTLLLAQQSQQLPQPRQPGQWCPVGWMASGSYCVPGSDKAQCKWTANSSRCG
Ga0126377_136121101	3300010362	Tropical Forest Soil	MLKTLIIATVLLPRLAITQQQQLPQPRQPCPVGWMASGSYCIPGSDKAPVAIAGSREGGSYCIR*
Ga0126379_107581362	3300010366	Tropical Forest Soil	MLKTLIIATVLLPTLAFGQRTQQLPQPRQPGQWCPVGWMASGNYCVPGSDKAPA
Ga0126379_108417601	3300010366	Tropical Forest Soil	TITMLKTLIIATVLLPKLAIAQRSQHLPQPRQPGQWCPVGWMASGSYCVLGSDKAPAAISKNGW*
Ga0126379_113231081	3300010366	Tropical Forest Soil	VLKTLIIATVLLPTLALAQRSQQLPQPRRPGQWCPVGWMASGNYCVPGSDNTPAAIPKNGWCPAGWR
Ga0126379_118386361	3300010366	Tropical Forest Soil	MLKTLIIATVLLPTLAIAQRSQQLPQPRQPGQWCPVGWMASGNYCVPGSDKAPAAIPKNGWCPAGWR
Ga0126381_1006986271	3300010376	Tropical Forest Soil	VLKTLIIATMLLPRLAITQQSQQLPQPREPGQWCPVGWMASGEYGVPGSDKAPAAITKKG
Ga0126383_116672753	3300010398	Tropical Forest Soil	MLKTLIIATVLLPRLAIAQQSQQLPQPRQPGRWCPVGWVASGSYCVPGSDKAPAAIPK
Ga0126383_120382771	3300010398	Tropical Forest Soil	MLKTLIVATLLLPTLALAQRSQQLPQPRQPGQWCPVGWMASGNYCVADSDKAPAAIPKNGWCPAGWRE
Ga0137382_104382953	3300012200	Vadose Zone Soil	MLKSLILATALLPSLAFAQSQQLPQPRRPGQWCPEGWSASGSYCVPGSTKASPA
Ga0137382_109393061	3300012200	Vadose Zone Soil	MVKTLIIATVLLPTLAFAQQQLPQPRKPGQWCPMGWSASGNYCLPGSDKAPQAIPKNG
Ga0137370_102356861	3300012285	Vadose Zone Soil	MLKTLIIATVLLPRLAIAQQSQQLPQPGGWMASGSYCVPGSDKAPAAISKKDWCPAGRRESGSYCIR*
Ga0137407_107940083	3300012930	Vadose Zone Soil	MLKTLIIATVLLPTLAFAQQQLPQPRRPGEWCPVGWSASGSYCVPASDKAPQAVPKKGWCPAG
Ga0126369_107016302	3300012971	Tropical Forest Soil	MLKTLIIAIVLLPTVVIAQRSQHLPQPRQPGQWCPVGWMASGSYCVPGSDKAPAAIPKNGWCPAG*
Ga0126369_118732482	3300012971	Tropical Forest Soil	MLKTLIIATVLLPKLAIAEQSQPLPQPRQPGQWCPVGWIASGSYCVPGSDKAPAAIPK
Ga0126369_128094071	3300012971	Tropical Forest Soil	GRDGPQARTITVLKTLIIATMLLPRLAITQQSQQLPQPREPGQWCPVGWMASGEYSVPGSDKAPAAITKKG*
Ga0132255_1036100252	3300015374	Arabidopsis Rhizosphere	VLKTLIIATVLLPRLTIAQQFQQLPQSRHLVGWMESGSYYVPSDKAPATIAGSRESGNYCIH*
Ga0182036_101576602	3300016270	Soil	MLKTLIIATVLLPSLALAQRSQQLPRPRQPGQRCPVGWMASPSYCLPGSDEAPAAIAKNGWCPAGWRESGSYCIR
Ga0182036_110867262	3300016270	Soil	MLKTLIISTVLLPVLAFAQQSQQLPQPRQPGQWCPVGWTASGSYCVPGSDKA
Ga0182036_111798823	3300016270	Soil	MLKTLIIATVLLPKLAIAEQSQPLPQPRQPGQWCPVGWMASGSYCVLGSDKAPAAISKNG
Ga0182041_103096991	3300016294	Soil	MPKLQTIVMLKSLIIATVLLPTLAVAQRSQQLPQPRQPGQWCPVGWMASGSYCVPGSDKAPA
Ga0182041_108685221	3300016294	Soil	MLKTLITATVLLPKLAIAEQSQPLPQPRQPGQWCPVGWMASGSYCVLGSDKAPAAISKNG
Ga0182033_121240633	3300016319	Soil	MLKTLIIATVLLPKLALVQQSQQLPQPRQPGQWCPVGWMASGSYCVPGSDKAPAAIP
Ga0182035_110043811	3300016341	Soil	MLKSLIVATVLLPTLAAAQRSQQLPQPRQPGQWCPVGWMASGSYCVPGSDKVP
Ga0182035_110177392	3300016341	Soil	MLKTLIIATVLLPTLALAQRSQQLPQPRQPGQWCPVGWMASGSYCVLGSDKAPAAISKN
Ga0182035_121964481	3300016341	Soil	MLKTLIIATVPLPTLAFAQRSQQLPQPRQPGQWRPVGWMASGSYCVPASDK
Ga0182032_113097711	3300016357	Soil	MLKTLIIATVLLPTLAIAQRSQHLPQPRQPGQWCPVGWMASGNYCVPGSDKAPAAIPKNG
Ga0182032_114044822	3300016357	Soil	MLKTLIIATVLLPKLALAQQSQQLPQPRQPGQWCPVGWVASGSYCVPGSEKAPQAV
Ga0182034_102947961	3300016371	Soil	MPKLQTIVMLKSLIIATVLLPTLAVAQRSQQLPQPRQPGQWCPVGWMASGSYCVPGSDKAPAA
Ga0182034_109556751	3300016371	Soil	MLKTLIIATVLLPTLALAQRSQQLPQPRQPGQWCPVGWTASGSYCVPGSEKAPAAIPNGTLAMPVLGGLHHQYFRA
Ga0182034_113591323	3300016371	Soil	MLKSLIVATVLLPTLAAAQRSQQLPQPRQPGQWCPVGWMASGSYCVPGSDKVPPLF
Ga0182040_102118691	3300016387	Soil	VLKTLIIATVLLPMLAFAQQSQQLPQPRQLGQWCPVGWVASGRYCVLGSDKAPQAVPKNGWCPTGWRESGSYCIR
Ga0182040_107377334	3300016387	Soil	MLKTLIIATVLLPTLAFGQRSQQLPQPRQPGQWCPAGWMASGNYCVPGSDKAPAAIPKNGWCPAGW
Ga0066669_100267063	3300018482	Grasslands Soil	MLKTLIIATVLLPRLAIAQQSQQLPQPGGWMASGSYCVPGSDKAPAAIPKKDWCPACRRESGSYCIR
Ga0126371_101614666	3300021560	Tropical Forest Soil	MLKTLIIATVLLPTLAFAQRPQQLPQPRQPGQWCPVGWIASGSYCVPGSDKPGAARGIPS
Ga0126371_123952641	3300021560	Tropical Forest Soil	MLKTLIIATVLLPKLAIAQRSQHLPQPRQPGQWCPVGWMASGSYCVLGSDKAPAAISKNG
Ga0126371_123963832	3300021560	Tropical Forest Soil	MLKAVIIAIVLLPRLTIVQQSHQLPQRGGWMASGSYCVSGSDKAPSRSLKSCGDPRL
Ga0209237_11090753	3300026297	Grasslands Soil	MLKTLIIATVLLPTLAFAQQQLPQPRKPGEWCPVGWSASGSYCVPASDK
Ga0209577_104355502	3300026552	Soil	ARAAPACIDGPAAPGCFTMLKTLIIATVLLPRLAIAQQSQQLPQPGGWMASGSYCVPGSDKAPAAIPKKDWCPAGRRESGSYCIR
Ga0318541_100573386	3300031545	Soil	MLKTLIIATVLLPSLALAQRSQQLPRPRQPGQRCPVGWMASPTYCLPGSDEAPAAIAKNGWCPAGWRESGSYCIR
Ga0318541_107334491	3300031545	Soil	MLKSLIIATVLLPTLAVAQRSQQLPQPRQPGQWCPVGWMASGSYCVPGSDKAPAA
Ga0318571_102311412	3300031549	Soil	MPYLRTLTILKTLIIATVLLPTLAIAQRSQQLPQPRQPGQWCPVGWMASGSYCVP
Ga0318528_107082291	3300031561	Soil	MLKTLIIATVLLPTLAVAQRSQQLPQPRQPGQWCPVGWMASGNYCVPGSD
Ga0318573_102380302	3300031564	Soil	MLKTLIIATVLLPTLAIAQRSQHLPQPRQPGQWCPVGWMASGNYCVPGSD
Ga0310915_103404043	3300031573	Soil	MLKSLIVATVLLPTLAAAQRSQQLPQPRQPGQWCPVGWMASGSYCVPGSDKAPPLFRR
Ga0318542_102317763	3300031668	Soil	MPKLQTIVMLKSLIIATVLLPTLAVAQRSQQLPQPRQPGQWCPVGWMASGSY
Ga0318574_105392131	3300031680	Soil	MLKTLIISTVLLPVLAFAQQSQQLPQPRQPGQWCPVGWMASGSYCVPGSDKAPAAIPKNG
Ga0318572_102912361	3300031681	Soil	MLKSLIVATVLLPTLAAAQRSQQLPQPRQPGQWCPVGWMASGSYCVPGSDKVPPLFR
Ga0318496_101819112	3300031713	Soil	MLKTLIIATVLLPTLALAQRSQQLPQPRQPGQWCPVGWMASGNYCVPGSDKAPAAI
Ga0306917_104094554	3300031719	Soil	MFKTLIIATLLLPTLAIAQQSQQLPQPRQPGQWCPVGWMASGNYCVPGSDKAPAAISKNGWCSAGR
Ga0306917_108354862	3300031719	Soil	MLKTLIIATVLLPKLAIAEQSQPLPQPRQPGQWCPVGWMASGSYCVPGSDKAPAAIPKN
Ga0306917_111879261	3300031719	Soil	MLKTLIVATVLLPTLALAQRSHQLPQPRQPGQWCPVGWMASGSYCVPGSDKAPAAFPKNGWCPAGW
Ga0307469_118050921	3300031720	Hardwood Forest Soil	VLKTLIIATMLLPRLAFAQQSQQLPQPRQSGQWCAVSWVSSGNCCVPGSDKAPAAIPKKGWC
Ga0306918_103654844	3300031744	Soil	MLKTLIIATVLLPKLTLAQQSQQLPQPRQPGQWCPVGWVASGSYCVPASDK
Ga0306918_105359244	3300031744	Soil	MLKTLIIATVLLPTLAIGQRSQQLPQPRQPGQWCAVGWVASGSYCVPGSDKAPA
Ga0306918_106396273	3300031744	Soil	MLKTLIIATVLLPKLAIAEQSQPLPQPRQPGQWCPVGWMASGSYCVPGSDKAPAAIPKNGWCPAG
Ga0306918_109065862	3300031744	Soil	MLKTLIISTVLLPVLAFAQQSQQLPQPRQPGQWCPVGWTASGSYCVPGSDKAPAAIPKKG
Ga0318535_103871991	3300031764	Soil	MLKTLIIATVLLPTLAIAQRSQHLPQPRQPGQWCPVGWMASGNYCVPGSDKAPAAIPK
Ga0318554_107892751	3300031765	Soil	MLKTLIISTVLLPVLAFAQQSQQLPQPRQPGQWCPVGWTASGSYCVPGSD
Ga0318521_100723334	3300031770	Soil	MPYLRTLTILKTLIIATVLLPTLAIAQRSQQLPQPRQPGQWCPVGWMASGSYC
Ga0318546_102192561	3300031771	Soil	MPKLQTIVMLKSLIIATVLLPTLAVAQRSQQLPQPRQPGQWCPVGWMASGSYCVPGSD
Ga0318543_103433291	3300031777	Soil	MPKLQTIVMLKSLIIATVLLPTLAVAQRSQQLPQPRQPGQWCPVGWMASGSYCVPGSDKAPAAI
Ga0318543_103707193	3300031777	Soil	MLKTLIVATVLLPTLALAQRSHQLPQPRQPGQWCPVGWMASGSYCVPGSD
Ga0318508_11836371	3300031780	Soil	MLKTLIISTVLLPVLAFAQQSQQLPQPRQPGQWCPVGWTASGSYCVPGSDKAPAAIPK
Ga0318547_101866133	3300031781	Soil	MLKTLIIATVLLPTLALAQRSQQLPQPKQPGQWCPAGWMASGSYCVPGSDKAPAAIPKNG
Ga0318552_102503373	3300031782	Soil	MLKTLIISTVLLPVLAFAQQSQQLPQPRQPGQWCPVGWTASGSYCVPGS
Ga0318548_100484741	3300031793	Soil	MLKTLIIATVLLPTLAIAQRSQHLPQPRQPGQWCPVGWMASGNYCVPGSDKAPAAIPKNGWCPAGWRES
Ga0318550_100639001	3300031797	Soil	MLKTLIISTVLLPVLAFAQQSQQLPQPRQPGQWCPVGWTASGSYCVP
Ga0318523_102969361	3300031798	Soil	MLKSLIVATVLLPTLAAAQRSQQLPQPRQPGQWCPVGWMASGSYCVPGSDKVPPLFRRTV
Ga0318564_104057491	3300031831	Soil	MLKILVIATVLLPTLALAQRSQQLPQPRQPGQWCPVGWMASGNYCVPGSDKAPA
Ga0318499_103154442	3300031832	Soil	MLKTLIISTVLLPVLAFAQQSQQLPQPRQPGQWCPVGWTASGSYCVPGSDKAPAAIPKNGWCP
Ga0310917_105814182	3300031833	Soil	MLKTLIIATVLLPKLAIAEQSQPLPQPRQPGQWCPVGWMASGSYCVLGSDK
Ga0318511_102224952	3300031845	Soil	MLKTLIIATVLLPTLAIAQRSQHLPQPRQPGQWCPGGWMASGNYCVPGSDKAP
Ga0318495_100987732	3300031860	Soil	MLKTLIIATLLLPTLALAQQQLPQPRRPGEWCPVGWSASGNYCVPASDKAPQAVPKKGWC
Ga0306919_105629631	3300031879	Soil	VLKTLIIATVLLPKLAIAQQSQQLPQPTQPGQWYPMGWMASGSYCVPGSDKAPAAIPKKGLCP
Ga0306919_115005013	3300031879	Soil	MLKTLIVATVLLPTLALAQRSHQLPQPRQPGQWCPVGWMASGSYCVPGSDKAPAA
Ga0306925_105606253	3300031890	Soil	MLKTLIIATVLLPTLAIGQRSQQLPQPRQPGQWCAVGWVASGSYCVPGSDKAPAAIPKNGWCPAG
Ga0318551_103375921	3300031896	Soil	MLKTLIIATVLLPTLAIAQRSQHLPQPRQPGQWCPVGWMASSNYCVPG
Ga0318520_100307276	3300031897	Soil	MLKTLIISTVLLPVLAFAQQSQQLPQPRQPGQWCPVGWMASGSYCVPGSDK
Ga0318520_102833371	3300031897	Soil	MLKSLIVATVLLPTLAAAQRSQQLPQPRQPGQWCPVGWMASGSYCVPGS
Ga0318520_109885521	3300031897	Soil	MLKTLIVATVLLPTLALAQRSHQLPQPRQPGQWCPVGWMASGSYCVPGSDKAPAAFPKNGWCPAGWRESG
Ga0306921_108019931	3300031912	Soil	VLKTLIIATVLLPMLAFAQQSQQLPQSRQPGQWCPVGWVASGSYCVPGSDKAPQAVPKNG
Ga0306921_125971571	3300031912	Soil	MLKTLIIATVLLPRLAIAQQSQQLPQPRQPDQWCPVGWVASGSCCVPGSDKAPQTIPKNGWCPTGWRESGSYCIR
Ga0310912_102904753	3300031941	Soil	MLKSLIVATVLLPTLAAAQRSQQLPQPRQPGQWCPVGWMASGSYCVPG
Ga0310912_113789361	3300031941	Soil	LHPVLFLRTITMLKTLIIATVLLPKLAIAQRSQHLPQPRQPGQWCPVGWMASGSYCVLGSDKAPAAISKNGW
Ga0310913_102585431	3300031945	Soil	MLKTLIIATVLLPTLALAQRSQQLPQPKQPGQWCPAGWMASGSYCVPGSDKA
Ga0310910_108333781	3300031946	Soil	VLKTLIIATVLLPMLAFAQQSQQLPQSRQPGQWCPVGWVASGSYCVPGS
Ga0318531_102297541	3300031981	Soil	MLKTLIIATVLLPTLAIAQRSQHLPQPRQPGQWCPVGWMASGNYCVPGSDKAPAAIPKNGWCPAGW
Ga0318531_105551061	3300031981	Soil	MLKTLIIATVPLPTLAFAQRSQQLPQPRQPGQWRPVGWMASGSYCVPASDKEPAAIPKNGWCPIGWRE
Ga0306922_107649141	3300032001	Soil	VLKTLIIATVLLPMLAFAQQSQQLPQSRQPGQWCPVGWVASGSYCVPGSDKAP
Ga0306922_119199681	3300032001	Soil	MLKTLIIATVLLPTLAIGQRSQQLPQPRQPGQWCAVGWVASGSYCVP
Ga0318569_100542921	3300032010	Soil	MPYLRTLTILKTLIIATVLLPTLAIAQRSQQLPQPRQPGQWCPVGWMASGSYCVPG
Ga0318569_101571521	3300032010	Soil	MLKTLIIATVLLPTLALAQRSQQLPQPRQPSQWCPVGWMASGNYCVRGSDK
Ga0310911_107092061	3300032035	Soil	MLKTLIIATVLLPTLAIGQRSQQIPQPRQPGKWCPVGWMASGSYCVPGSDKAPAAIPKNGWCPA
Ga0310911_108658821	3300032035	Soil	MLKTLIIATVLLPTLALAQRSQQLPQPRQPGQWCPVGWTASGSYCVPGSEKA
Ga0318545_100790453	3300032042	Soil	MKVLVVIGVIALLPMLALAQQSQLPQPRKPGKWCPEGWSANGNYCVPGSDKARQAIPKNGWCPVGWRE
Ga0318558_103817982	3300032044	Soil	MLKTLIISTVLLPVLAFAQQSQQLPQPRQPGQWCPVGWTASGSYCVPGSDKAPAA
Ga0318506_105058742	3300032052	Soil	MLKTLIIATVLLPTLAIAQRSQQLPQPRQPGQWCPVGWTASGNYCVPGSDKAPAAIPKNGWCP
Ga0318575_103275871	3300032055	Soil	MPYLRTLTILKTLIIATVLLPTLAIAQRSQQLPQPRQPGQWCPVGWMASGSYCVPGSD
Ga0318505_101017355	3300032060	Soil	MPKLQTIVMLKSLIIATVLLPTLAVAQRSQQLPQPRQPGQWCPVGWMASGSYCVPGS
Ga0318504_102506831	3300032063	Soil	MLKSLIVATVLLPTLAAAQRSQQLPQPRQPGQWCPVGWMASGSYCVPGSDKAPFAIPK
Ga0318514_105269433	3300032066	Soil	MLKTLIIATVLLPSLALAQRSQQLPRPRQPGQRCPVGWMASPTYCLPGSDEAPAAIAKNGWC
Ga0318553_103070521	3300032068	Soil	MKVLAVFGAIALLPMLALAQQSQLPQPRKPGKWCPEGWSANGNYCVPGSDKARQAIPKNGWC
Ga0306924_116874612	3300032076	Soil	MLKTLIIATVLLPTLALAQRSQQLPQPRQPGQWCPVGWTASGSYCVPGSEKAPAAIPNGTLAMPVLGGLH
Ga0306924_122626811	3300032076	Soil	MPKTLIIATVLLPTFALEQRQLPEPSQPGKWCPEGWSATANYCVPGSDKAPAAIPKNGWCPVGWRES
Ga0318525_102468752	3300032089	Soil	MLKTLIIATLLLPTLALAQQQLPQPRRPGEWCPVGWSASGNYCVPASDK
Ga0318577_105703632	3300032091	Soil	MLKTLIVATVLLPTLALAQRSHQLPQPRQPGQWCPVGWMASGSYCVPGSDKAPF
Ga0306920_1014746793	3300032261	Soil	LKTLIFATVLLPKLAIAEQSQPLPQPRQPGQWCPVGWMASGSYCVLGSDKAPAAISKNGW
Ga0310914_105827503	3300033289	Soil	MLKTLIIATVLLPTLALAQRSQQLPQPRQPGQWCPVGWVASGSYCVPGSDKA
Ga0310914_112047832	3300033289	Soil	MLKTLIIATVLLPTLALAQRSQQLPQPRQPGQWCPVGWMASGNYCVPGSDKAPAAIPKNGWC
Ga0318519_108133031	3300033290	Soil	MLKTLIIATVLLPRLAIAQQAQQLPQPRQPGQWCPVGWMASGNYCVPGSDKALAAI

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F031185

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences