NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F031022

Metagenome / Metatranscriptome Family F031022

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F031022
Family Type Metagenome / Metatranscriptome
Number of Sequences 183
Average Sequence Length 66 residues
Representative Sequence VAVRTPDSGFENLERRYESVARLVPYLLLVVPFIPYVLSQAPSAGAIGITVGVAAAAGAWVAWM
Number of Associated Samples 162
Number of Associated Scaffolds 183

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 98.90 %
% of genes near scaffold ends (potentially truncated) 98.36 %
% of genes from short scaffolds (< 2000 bps) 92.35 %
Associated GOLD sequencing projects 157
AlphaFold2 3D model prediction Yes
3D model pTM-score0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (62.295 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(36.612 % of family members)
Environment Ontology (ENVO) Unclassified
(31.694 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(44.809 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.
1INPhiseqgaiiFebDRAFT_1053868202
2JGI12627J18819_103392361
3JGI24740J21852_100550891
4Ga0062385_100508163
5Ga0062389_1001344425
6Ga0058882_15066831
7Ga0066869_100172812
8Ga0070661_1000842683
9Ga0008090_144222001
10Ga0070714_1011335862
11Ga0070711_1014332612
12Ga0070678_1002175283
13Ga0070730_100706271
14Ga0070730_102229921
15Ga0070730_107317662
16Ga0070733_110471812
17Ga0068855_1017891531
18Ga0066708_110257002
19Ga0066903_1011730223
20Ga0068851_100735841
21Ga0070766_100668881
22Ga0070766_101383731
23Ga0079220_117066022
24Ga0075434_1014902902
25Ga0079219_109350771
26Ga0105240_119387141
27Ga0116218_13567011
28Ga0116221_11471711
29Ga0126373_131416201
30Ga0126370_105993071
31Ga0126370_110870861
32Ga0134125_107975691
33Ga0105239_124133691
34Ga0126381_1003898391
35Ga0134124_114938932
36Ga0126346_12232623
37Ga0126361_108738862
38Ga0126356_101786702
39Ga0137388_120395561
40Ga0137370_101042961
41Ga0157324_10490691
42Ga0157338_10638151
43Ga0137416_113213222
44Ga0164299_100586183
45Ga0126369_125426881
46Ga0164309_104740861
47Ga0164304_100120341
48Ga0164307_105532152
49Ga0163162_108680811
50Ga0181523_100982773
51Ga0157379_111748481
52Ga0134072_101292032
53Ga0182041_104393533
54Ga0163161_101101661
55Ga0187820_10420193
56Ga0187807_10387701
57Ga0187777_112117181
58Ga0187822_101743461
59Ga0187815_101870411
60Ga0187883_102516901
61Ga0187766_101773073
62Ga0187772_102570621
63Ga0187774_108445782
64Ga0173479_108665252
65Ga0210404_101057363
66Ga0210408_109902572
67Ga0210388_104022311
68Ga0210388_113155932
69Ga0193719_101622962
70Ga0213881_100964143
71Ga0213881_103495152
72Ga0210393_106628881
73Ga0210385_110862461
74Ga0210397_115049712
75Ga0210386_108299261
76Ga0210383_114604431
77Ga0210383_115149212
78Ga0210394_105056542
79Ga0210390_107572502
80Ga0210402_118099102
81Ga0210410_112059911
82Ga0210410_115335621
83Ga0247693_10300172
84Ga0247661_10146833
85Ga0207656_101282491
86Ga0207692_103938751
87Ga0207685_104196711
88Ga0207664_102350833
89Ga0207664_104546611
90Ga0207711_102205873
91Ga0207679_101323751
92Ga0207651_104111503
93Ga0207639_101257513
94Ga0207675_1002960241
95Ga0209863_101354851
96Ga0209156_103293882
97Ga0209621_10041151
98Ga0208575_10275431
99Ga0208369_10047273
100Ga0209111_10066793
101Ga0207948_10146512
102Ga0209221_10856851
103Ga0209274_105528041
104Ga0209465_106320642
105Ga0209275_107724691
106Ga0209380_102346183
107Ga0209069_107057151
108Ga0247689_10647771
109Ga0137415_106768611
110Ga0307284_103982901
111Ga0302235_102428422
112Ga0308309_106187391
113Ga0302307_103571272
114Ga0302324_1030067732
115Ga0318516_100758781
116Ga0318516_103197522
117Ga0318516_104212922
118Ga0318534_101508193
119Ga0318534_102295011
120Ga0318528_101611301
121Ga0318573_101822433
122Ga0318515_100612213
123Ga0318555_107954861
124Ga0318561_102070303
125Ga0318561_106126962
126Ga0318561_107603661
127Ga0318574_100941581
128Ga0318574_109504632
129Ga0318572_101726401
130Ga0310686_1087471311
131Ga0307476_110406811
132Ga0307469_102743563
133Ga0318500_103232331
134Ga0318501_106318422
135Ga0307475_111616431
136Ga0318535_104249372
137Ga0318554_107041882
138Ga0318509_104354742
139Ga0318546_113284291
140Ga0318543_102307581
141Ga0318543_105745611
142Ga0318566_102101232
143Ga0318548_100520651
144Ga0318503_101439442
145Ga0318523_104828502
146Ga0318567_102540151
147Ga0318564_101258351
148Ga0318517_101811432
149Ga0318511_100689531
150Ga0318512_103358491
151Ga0318495_101372863
152Ga0306919_109425512
153Ga0306919_112147072
154Ga0306925_110185511
155Ga0318536_105801062
156Ga0310912_112532752
157Ga0310913_102973073
158Ga0310909_113373212
159Ga0306926_102833113
160Ga0306922_106442723
161Ga0306922_109357772
162Ga0306922_113162182
163Ga0318569_101390811
164Ga0318569_105881392
165Ga0318507_104586852
166Ga0310911_108215392
167Ga0318559_104548262
168Ga0318532_102752331
169Ga0318510_103495111
170Ga0318524_101082723
171Ga0308173_115983712
172Ga0306924_119907512
173Ga0318525_104695431
174Ga0307470_102161591
175Ga0307471_1037324182
176Ga0335085_107274651
177Ga0335081_103061161
178Ga0335075_107130121
179Ga0335071_105257423
180Ga0335077_101714831
181Ga0310914_102138903
182Ga0318519_100501793
183Ga0318519_101642083
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 57.61%    β-sheet: 0.00%    Coil/Unstructured: 42.39%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

51015202530354045505560VAVRTPDSGFENLERRYESVARLVPYLLLVVPFIPYVLSQAPSAGAIGITVGVAAAAGAWVAWMCytopl.Sequenceα-helicesβ-strandsCoilSS Conf. scoreTM segmentsTopol. domains
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.52
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
62.3%37.7%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Peatland
Bog Forest Soil
Bog
Freshwater Sediment
Watersheds
Soil
Soil
Vadose Zone Soil
Terrestrial Soil
Tropical Forest Soil
Grasslands Soil
Surface Soil
Peatlands Soil
Agricultural Soil
Soil
Soil
Soil
Hardwood Forest Soil
Soil
Soil
Tropical Peatland
Prmafrost Soil
Tropical Forest Soil
Forest Soil
Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Agricultural Soil
Palsa
Exposed Rock
Corn Rhizosphere
Switchgrass Rhizosphere
Arabidopsis Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Populus Rhizosphere
Switchgrass Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Switchgrass Rhizosphere
Corn Rhizosphere
Boreal Forest Soil
Tropical Rainforest Soil
4.4%36.6%4.9%3.8%3.8%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
INPhiseqgaiiFebDRAFT_10538682023300000364SoilVAVRTPDSGFENLERRYESVARLVPYLLLVVPFIPYVLSQAPSAGAIGITVGVAAA
JGI12627J18819_1033923613300001867Forest SoilVTVRTPDSGFENLERRYETVARLVPYLLLVVPFIPYVLSQSPTAGAIGITAGVAAAAGAWVAWMVILHPGPL
JGI24740J21852_1005508913300001979Corn RhizosphereVAVRTPDSGFENLERRYESVARLVPYLLLVVPFIPYVLSQAPSAGAIGITVGVAAAA
Ga0062385_1005081633300004080Bog Forest SoilVRTPDSSLESMEQRYDSLLRLLPFLLLTVPLLPYFLSQRPTAGAFGITAGVAVAAGAWITWMVILHPGWAER
Ga0062389_10013444253300004092Bog Forest SoilVKLRTPDSDFEVLERRFDSMIRVIVYLLLAVPLIPYVLSQRPSPGALGITVGVAMAAAAWYTWMVILHPGWTRRPWLMR
Ga0058882_150668313300004121Forest SoilVTVKTPDSGFEVLERRYQRLAHVIVYVLLAVPLLPYALSQNPSAGAIGIT
Ga0066869_1001728123300005165SoilVAVRTPDSGFENLERRYESVARLVPYLLLVVPLIPYALSQAPSAGAFGITLGVAAAAGAWVAWMV
Ga0070661_10008426833300005344Corn RhizosphereVVAVRTPDSGFENLERRYESVARLVPYLLLVVPFIPYVLSQAPSAGAIGITVGVAAAAGAWVAWMVVL
Ga0008090_1442220013300005363Tropical Rainforest SoilVTVRTPDSGFENLERRYESVARWVPFLLLVVPFIPYVLSQAPSAGAVGITVAVAAGAWVAWMV
Ga0070714_10113358623300005435Agricultural SoilMSAVTVRTPDSGFENLDRRYESAGRLVPFLLLVVPLIPYVLTQAPSAGAVSITLTVATAAGAWVTWRVVLHPGPPRR
Ga0070711_10143326123300005439Corn, Switchgrass And Miscanthus RhizosphereVRTPDSGFEPLELRFERIQRLVPYLLLTFPLIPYVLSQNPSAGAVGITVGVAVAAAAWITWWISLHPAWADRRWLMGIY
Ga0070678_10021752833300005456Miscanthus RhizosphereVAVRTPDSGFENLERRYESVARLVPYLLLVVPFIPYVLSQAPSAGAIGITV
Ga0070730_1007062713300005537Surface SoilVTVRTPDSGLESLERRYQSLLRWVPYLVLAVPLLPYALTQGPTAGAVGITVGVAAAAGAWITWFTILHPGWEERRWLMRLYCVGLLAFIAALTAR
Ga0070730_1022299213300005537Surface SoilVTVRTPDSGLESLERRYESIMRWVPYLVLVVPLLPYALTQGPTAGAVGITVGVA
Ga0070730_1073176623300005537Surface SoilVTVRTPDSGLESLEQRYDSIMRMAPFLVLATPLLPYILSQSPSAGAAGITVGIAVAAGAWITWMTILHPAWTER
Ga0070733_1104718123300005541Surface SoilVTVSTPDSGFEALERRYERLAHVIVYVLLAVPLLPYALSQNPSAGAIGITA
Ga0068855_10178915313300005563Corn RhizosphereVAVRTPDSGFENLERRYESVARLVPYLLLVVPFIPYVLSQAPSAGAIGITVGVAA
Ga0066708_1102570023300005576SoilVRTPDSGFEPLELRFERLQRFVPYLLLTFPLIPYVLSQNPSAGAVGITVGVAVAAAAW
Ga0066903_10117302233300005764Tropical Forest SoilVTVRTPDSGFEAVEQRYETLSRVIPYLMLVVPLIPYVLSQSPTAGAFGITVGVAVAA
Ga0068851_1007358413300005834Corn RhizosphereVAVRTPDSGFENLERRYESVARLVPYLLLVVPFIPYVLSQAPSAGAIGITVGVAAAAGAWVAWM
Ga0070766_1006688813300005921SoilVTVRTPDSGIESMEQRYDSLLRLLPFLLLTVPLLPYFLSQRPTAGAFGITAGVAVAAGAWITWMVILHPGWAERPW
Ga0070766_1013837313300005921SoilVTVRTPDSGLESLERRYESIVRWVPYLVLVVPLLPYALTQGPTAGAVGITVGVAVA
Ga0079220_1170660223300006806Agricultural SoilVSAVTVRTPDSGFENLERRYESVARLVPYLLLVVPFIPYVLSQAPTAGAIGITAGVAAAAGIWVAWMVVLHPGPPRRPWQGYVYFAGLLVFIAVLTFR
Ga0075434_10149029023300006871Populus RhizosphereVRTPDSGFENLDRRYESAGRLVPFLLLVVPLAPYVLTQTPSAGAAGITVAVAAAAGAWVTWRVV
Ga0079219_1093507713300006954Agricultural SoilVSAVTVRTPDSGFESLEKRYESLSRIIPYLLLAIPLVPYALSQSPTAGAFGITAGIAVAAGAWVTWLVVLK
Ga0105240_1193871413300009093Corn RhizosphereVNAVTVRTPDSGFEPLELRFERIQRLVPYLLLTFPLIPYVLSQNPSAGAVGITVG
Ga0116218_135670113300009522Peatlands SoilVTVRTPDSSFESIEHRYERLERFLPLLLLAVPLVPYVLSQSPTAGAFGITAGIAVAAGAWITWM
Ga0116221_114717113300009523Peatlands SoilMTVSTPDSGLELLEQRYERLAHVIVYVLLAVPLIPYVLSENPSAGAIGITAGVAAVA
Ga0126373_1314162013300010048Tropical Forest SoilVSTVTVRTPDSGFESLEKRYESLSRIIPYLLLAIPLVPYALSQSPTAGAFGITAGIAVAAGAWVTWLV
Ga0126370_1059930713300010358Tropical Forest SoilVSAVTVRTPDSGFENLDRRYESVARWVPFLLLVVPFIPYVLSQAPSAGAVAITVGVAVAAGAWVAWMVLLHPGPPRRPW
Ga0126370_1108708613300010358Tropical Forest SoilVTVRTPDSGFESLEKRYESLSRIIPYLLLAIPLVPYALSQSPTAGAFGITAGIAVAAGAWVTWL
Ga0134125_1079756913300010371Terrestrial SoilVNAVTVRTPDSGFENLERRYESVARLVPYLLLVVPFIPYVLSQAPSAGAIGITVGVAAA
Ga0105239_1241336913300010375Corn RhizosphereVNAVTVRTPDSGFENLERRYESVARLVPYLLLVVPFIPYVLSQAPSAGAIGITVAVAAAAGAWVAWMVVLHPGPPRRP
Ga0126381_10038983913300010376Tropical Forest SoilVTVRTPDSGFESLERRYESLLRIVPYVVLAIPLLPYVLSQSPTAGAVGITVAIAVAAGAWITWFTLLH
Ga0134124_1149389323300010397Terrestrial SoilVSAVAVRTPDSGFENLERRYESVARLVPYLLLVVPFIPYVLSQAPSAGAIGITVGVAA
Ga0126346_122326233300010865Boreal Forest SoilVTVSRPDSGLESVERQYEKAARVVPYVLLVVPLVPYLLSQNPSAGAF
Ga0126361_1087388623300010876Boreal Forest SoilVTVRTPDSGFESIDQRFDRLERFIPFLLLAVPLIPYVLSQSPTAGAVGITAGVAVAA
Ga0126356_1017867023300010877Boreal Forest SoilVTVSRPDSGLESVERQYETVARIVPYILLVVPLVPYMLSQKPTAGAFGITAGIAVAA
Ga0137388_1203955613300012189Vadose Zone SoilVTVRTPDSGFESIEHRYERLERFLPFLLLVVPLIPYVLSQSPTAGALGITVGVAVAAGAWIMWM
Ga0137370_1010429613300012285Vadose Zone SoilMTVRTPDSGFESLELRYERIQRFLPYLLLTVPLIPYVLSQSPTAGAVGITAGVAVA
Ga0157324_104906913300012506Arabidopsis RhizosphereVSAVAVRTPDSGFENLERRYESVARLVPYLLLVVPFIPYVLSQAPSAGAIGITV
Ga0157338_106381513300012515Arabidopsis RhizosphereVSAVAVRTPDSGFENLERRYESVARLVPYLLLVVPFIPYVLSQAPSSGAIGITVGVAAGAGAWVAW
Ga0137416_1132132223300012927Vadose Zone SoilVSAVAVRTPDSGFESLEQRYETLSRVVPYLLLAVPLVPYVVSQSPSAGAFGITVAIAVAA
Ga0164299_1005861833300012958SoilVSAVAVRTPDSGFENLERRYESVARLVPYLLLVVPFIPYVLSQAPSAGAIGITVGVAAA
Ga0126369_1254268813300012971Tropical Forest SoilVSAVTVRTPDSGFENLDRRYESVARWVPYLLLVAPFIPYLLSQAPSAGAFGITVGVAVAAAAWVAW
Ga0164309_1047408613300012984SoilVSAVAVRTPDSGFENLERRYESVARLVPYLLLVVPFIPYVLSQAPSAGAIGITVGVAAAAGAWVAWMVVLHPGPP
Ga0164304_1001203413300012986SoilVSVVAVRTPDSGFENLERRYESVARLVPYLLLVVPFIPYVLSQAPSAGAIGITVGVAAAAGAWVAWMVVLHPGPPRR
Ga0164307_1055321523300012987SoilVSTVTVRTPDSGFESLEQRYESLSRIIPYLLLAIPLVPYALSQSPTAGAFGITAGIAAAAGAWVTWLVVLKPESTQRTWQKRVY
Ga0163162_1086808113300013306Switchgrass RhizosphereVNAVTVRTPDSGFENLERRYESVARLVPYLLLVVPFIPYVLSQAPSAGAIGITVGVAA
Ga0181523_1009827733300014165BogVTVRTPDGGFESIEHRFERLERIIPFLLLAVPLIPYVLSQSPTAGAVGITV
Ga0157379_1117484813300014968Switchgrass RhizosphereVSAVAVRTPDSGFENLERRYESVARLVPYLLLVVPFIPYVLSQAPSAGAIGITVGVAAAAGAWVAWMVV
Ga0134072_1012920323300015357Grasslands SoilVSAVTVRTPDSGFESLALRYDRVQRFLPYLLLTVPLIPYVLSQNPSAGAVGITVGTAVAAGAWSM
Ga0182041_1043935333300016294SoilVSVRTPDSGFDSLERYDSLLLLAPYLLLAVPLIPYALSQSPTAGAFGITAGVAAAAAAWI
Ga0163161_1011016613300017792Switchgrass RhizosphereVAVRTPDSGFENLERRYESVARLVPYLLLVVPFIPYVLSQAPSAGAIGITVGVAAAAGAWVAWMVV
Ga0187820_104201933300017924Freshwater SedimentVTVRTPDSGFEALEQRYEKMARMLPYVLLAVPLIPYVLSQNPTIGAFLITLG
Ga0187807_103877013300017926Freshwater SedimentVTVRTPDSGLESLERRYESLARVIQYVLLAIPLIPYVLVFRPSAGAFAITVG
Ga0187777_1121171813300017974Tropical PeatlandVTVRTPDSGFESLDRRYESIMRWLRYLLLAVPLVLYVLTQSPSAGAFGITMGIAVAAGAWITWMIILHPGWAQRPGLM
Ga0187822_1017434613300017994Freshwater SedimentVTVNTPDSGLESLERRYETILRVLPYPLLAVPLIPYALSQDPTAGAFAITAGIAVAAGAWIAWFLNL
Ga0187815_1018704113300018001Freshwater SedimentVTVRTPDSGFESVEQRFERLERFIPFLLLAVPLIPYVLSQRPTAGAVGITAGVAVAAGAWIMWM
Ga0187883_1025169013300018037PeatlandVTVRTPDGGFESIEHRFERLERIIPFLLLAVPLIPYVLSQSPTAGAVGITVGVAVAAGAWIMWMVILHPGGTERRWVM
Ga0187766_1017730733300018058Tropical PeatlandVTVRTPDSGFEALERRYKSAGRVAPYVLLTVPLIPYVLSQHPTSGALLIT
Ga0187772_1025706213300018085Tropical PeatlandVTVRTPDSGLESVEQRYDTLLQLMPYLLLAVPLIPYVLSEGPTAGASGITVGAV
Ga0187774_1084457823300018089Tropical PeatlandVTVRTPDSGFENLERRYESVARLVPFLLLVVPFIPYVLSQSPTAGAIGITVGIAAAAGAWVAWMVILHPGPPR
Ga0173479_1086652523300019362SoilVTVRTPDSGFEALEQRYESLTRIIPYLLIVVPLIPYVLSQSPTAGALGITV
Ga0210404_1010573633300021088SoilVRTPDSGFEPLELRFERIQRFVPYLLLTFPLIPYVLSQNPSAGAAGITVGVAVAAAAWITWWISLHPAWADRRWLMGIY
Ga0210408_1099025723300021178SoilVTVRTPDSGFESIEHRYERLERFLPLLLLAVPLAPYVLSQSPSAGAFGITAGVAVAAGAWITWMIHLHPRWTENRWLMR
Ga0210388_1040223113300021181SoilVTVRTPDSGFESIEHRYERLERFLPLLLLAVPLAPYVLSQSPSAGAFGITAGVAVAAGAWITWMIHLHPRWTENRWLMRV
Ga0210388_1131559323300021181SoilVRTPDSGFESIEHRYERLERFLPLLLLAVPLVPYVLSQSPTAGAFGITAGVAVAAGAWITWMIHLHPRWTENRWLMR
Ga0193719_1016229623300021344SoilVSAVTVRTPDSGFENLERRYETVARLVPYLLLVVPFIPYVLSQAPSAGAIGITVGVAAA
Ga0213881_1009641433300021374Exposed RockVTVRTPDSGFEAVEQRYQFLARVIPYLLLAVPLVPYVLSQSPTAGAFGITVGIAAA
Ga0213881_1034951523300021374Exposed RockVTVQPPDSGLESLERRYESLLRVAPYLVLAFPLLPYILTQGPTAGAVGITVGIAV
Ga0210393_1066288813300021401SoilVRTPDSGFESIEHRYERLERFLPLLLLAVPLVPYVLSQSPTAGAFGITAGVAVAA
Ga0210385_1108624613300021402SoilVTVRTPDSGFESIEHRYERLERFLPLLLLAVPLVPYVISQSPTAGAFGITAGVAVA
Ga0210397_1150497123300021403SoilVTVRTPDSGLESLERRYESIMQVVPYLVLAVPILPYVLSQSPSAGAAGITAGVAVAAGAWITWFTV
Ga0210386_1082992613300021406SoilVTARTPDSSLESMEQRYDLLLRLLPFLLLTVPLLPYFLAQSPTAGAFGITVGIAAAAGAWITWM
Ga0210383_1146044313300021407SoilVTVRTPDSGFEALELRFERIQRFVPYLLLTFPLIPYVLSQNPSAGAAGITVGVAVA
Ga0210383_1151492123300021407SoilVRTPDSGFESIEHRYERLERFLPLLLLAVPLVPYVLSQSPTAGAFGITAGVAVAAGA
Ga0210394_1050565423300021420SoilVRTPDSGFEPLELRFERIQRFVPYLLLTFPLIPYVLSQNPSAGAVGITVGVAVAAAAWITWWISLHPAWADRRWLM
Ga0210390_1075725023300021474SoilVTVRTPDSGFESIEHRYERLERFLPLLLLAVPLVPYVISQSPTAGAFGITAGVAVAAGAWITWMIHLHPRWTENRWLM
Ga0210402_1180991023300021478SoilVVAVRTPDSGFENLERRYESVARLVPYLLLVVPFIPYVLSQAPSAGAVGITVGVAAAAGA
Ga0210410_1120599113300021479SoilVRTPDSGFEPLELRFERLQRFVPYLLLTFPLIPYVLSQNPSAGAVGITVGVAVAAAAWITWWISLHPAWADRRWLMGIY
Ga0210410_1153356213300021479SoilVTVRTPDSGFENLDRRYESVTRLVPYLLLVVPLVPYALSQAPSAGAFGITVGVAVAAGAWVAWMVVLHPGPPRRPWQGYV
Ga0247693_103001723300024181SoilVAVRTPDSGFENLERRYESVARLVPYLLLVVPFIPYVLSQAPSAGAVGITVGVAAAAGAWVAWMVVL
Ga0247661_101468333300024254SoilVVAVRTPDSGFENLERRYESVARLVPYLLLVVPFIPYVLSQAPSAGAIGITVGVAAAA
Ga0207656_1012824913300025321Corn RhizosphereVAVRTPDSGFENLERRYESVARLVPYLLLVVPFIPYVLSQAPSAGAIGITVGVAAAAGAWVAWMVVLHP
Ga0207692_1039387513300025898Corn, Switchgrass And Miscanthus RhizosphereVRTPDSSFEPLELRFERIQRFVPYLLLTFPLIPYVLSQNPSAGAVGITVGVAVAAGVWITWWI
Ga0207685_1041967113300025905Corn, Switchgrass And Miscanthus RhizosphereVSAVAVRTPDSGFENLERRYESVARLVPYLLLVVPFIPYVLSQAPSAGAIGITVGVAAAAGAWVA
Ga0207664_1023508333300025929Agricultural SoilVRTPDSGFEPLELRFERLQRFVPYLLLTFPLIPYVLSQNPSAGAVGITVGVAVAAGAWITWWISLHPAWADRRW
Ga0207664_1045466113300025929Agricultural SoilVRTPDSGFEPLELRFERIQRLVPYLLLTFPLIPYVLSQNPSAGAVGITVGVAVAAGAWITWWISLHPAWADRR
Ga0207711_1022058733300025941Switchgrass RhizosphereVAVRTPDSGFENLERRYESVARLVPYLLLVVPFIPYVLSQAPSAGAIGITVGVAAAAG
Ga0207679_1013237513300025945Corn RhizosphereVAVRTPDSGFENLERRYESVARLVPYLLLVVPFIPYVLSQAPSAGAIGITVVVAAA
Ga0207651_1041115033300025960Switchgrass RhizosphereVAVRTPDSGFENLERRYESVARLVPYLLLVVPFIPYVLSQAPSAGAIGITVGVAAAAGAWVAWMVVLHPGPPRRPWQ
Ga0207639_1012575133300026041Corn RhizosphereVAVRTPDSGFENLERRYESVARLVPYLLLVVPFIPYVLSQAPSAGAIGITVG
Ga0207675_10029602413300026118Switchgrass RhizosphereVAVRTPDSGFENLERRYESVARLVPYLLLVVPFIPYVLSQAPSAGAIGITVGVAAAAGAWVAWMVVLHPGPPRRPWQGYVY
Ga0209863_1013548513300026281Prmafrost SoilVALRTPDSGFESLESRYLTIERFLPVLLLAVPLLPYALSQNPSAGALGITVGLAVAAGAWILGMVTLRPGWADRTWARWVYFPG
Ga0209156_1032938823300026547SoilVGAVTVRTPDSGFESLALRYDRVQRFLPYLLLTVPLIPYVLSQNPSAGAVGITVGTAAAGAWSMWMINLHPAWADRRWIMGIYFTGL
Ga0209621_100411513300026864Forest SoilVSAVTVRTPDSGFENLERRYETVARLVPYLLLVVPFIPYVLSQSPTAGAIGITA
Ga0208575_102754313300026920SoilVAVRTPDSGFENLERRYESVARWVPYLLLVAPFIPYVLSQAPSAGAISITVGVALAAGAWVAWMVVLHPGPPR
Ga0208369_100472733300026998Forest SoilVTVRTPDSGIESMEQRYDSLLRLLPFLLLTVPLLPYFLSQRPTAGAFGITAGVA
Ga0209111_100667933300027058Forest SoilVAVPTPDSGFENLERRYESVSRLVPYLLLVVPFIPYVLSQAPSAGAIGI
Ga0207948_101465123300027174Forest SoilVTVRTPDSGFESIEHRFERLERVIPFLLLAVPLIPYVLSQSPTAGAVGITAGVAVAAGAWIWWMTILHP
Ga0209221_108568513300027609Forest SoilVTVRTPDSGFESLERRYESVGRIAPYLLLAVPLVPYLLSERPDSGAFLITLGLVALA
Ga0209274_1055280413300027853SoilVTVRTPDSGLESLERRYESIMQVVPYLVLAVPILPYVLSQSPSAGAAGITAGVAVAAGAWITWFTVLRPGWADRCWLMR
Ga0209465_1063206423300027874Tropical Forest SoilVSTVTVRTPDSGFESLEKRYESLSRIIPYLLLAIPLVPYALSQSPTAGAFGITAGIA
Ga0209275_1077246913300027884SoilVALRTPDSGFESLFIRYEKFERLLPLLLLVLPLLPYVLSQSPSAAAAGITA
Ga0209380_1023461833300027889SoilVRTPDSGFESIEHRYERLERFLPLLLLAVPLVPYVISQSPTAGAFGITAGVALAAGAWIS
Ga0209069_1070571513300027915WatershedsVSAVAVRTPDSGFENLERRYESVARLVPYLLLVVPFIPYVLSQAPSAGAIGITAGVAAAAGAWVAWMVVLNPGPPRRPWQGYVYFA
Ga0247689_106477713300028281SoilVAVRTPDSGFENLERRYESVARLVPYLLLVVPFIPYVLSQAPSAGAVGITVGVAAAAGAWVAWMVVLHPGP
Ga0137415_1067686113300028536Vadose Zone SoilVAVRTPDSGFESLEQRYETLSRVVPYLLLAVPLVPYVVSQSPSAGAFGITVAIAVAAG
Ga0307284_1039829013300028799SoilVSAVTVRTPDSGFENLERRYETVARLVPYLLLVVPFIPYVLSQAPSAGAIGITVGVAAAAGAWVASM
Ga0302235_1024284223300028877PalsaVALRTPDSGFESLESRYLTIERFLPFLLLTVPLLPYVLSQNPSAGALGITAGIAVAAGAWIMVMVTLHPGWA
Ga0308309_1061873913300028906SoilVTVRTPDSGFESIEHRYERLERFLPLLLLAVPLMPYLLSQSPTAGAFGITAGVAVAAGAWITWMIHLHPRWTEHRWLMRV
Ga0302307_1035712723300031233PalsaVALRTPDSGFESLESRYLTIERFLPFLLLTVPLLPYVLSQNPSAGALGITAGIAVAAGA
Ga0302324_10300677323300031236PalsaVTVRTPDSGFEALESQADRLARVAPYLLLAVPLLPYALSQDPAAGAFGITV
Ga0318516_1007587813300031543SoilVSVRTPDSGFDSLERYDSLLLLAPYLLLAVPLIPYALSQSPTAGAFGITAGVAAAAAAWITWM
Ga0318516_1031975223300031543SoilVTVRTPDSGFENLERRYESVARWVPYLLLVAPFIPYVLSQAPSAGAFGITVGVAAGAGVWVA
Ga0318516_1042129223300031543SoilVTVRTPDSGFENLDRRYESVARWVPFLLLVVPFIPYVLSQAPSAGAVGIT
Ga0318534_1015081933300031544SoilVSPVTVRTPDSGFEAVEQRYQSLTRVIPYLLLAVPLVPYALSQSPTAGAFGITVGIAVAAGAWATWVVVLHPDGTQRPWQGQVYFAGLLGFIAALTF
Ga0318534_1022950113300031544SoilVTVNTPDSGLESLERRYESIMRVLAYPLLAVPLIPYVLTQNPSAGAFAITAGIAAGAGAWVLWFH
Ga0318528_1016113013300031561SoilVSVRTPDSGFDSLERYDSLLLRAPYLLLAVPLIPYALSQSPTAGAFGITAGVAAAAAAWI
Ga0318573_1018224333300031564SoilVTVRTPDSSLESLDRRYESMMRVVPYLVLSVPLLPYLVSQSPTAGAFGITVGLAVAAGARMQDGK
Ga0318515_1006122133300031572SoilVRTPDSGFENLERRYESVARWAPYLLLVAPFIPYLLSQAPSAGAIGITAGVAAAAGAWVAWMVVLHPGPPGRP
Ga0318555_1079548613300031640SoilVTVRTPDSGFENLERRYESVARWVPYLLLVAPFIPYVLSQAPSAGAFGITVGVAAGAGVWVAWMVVLHPGPPRRPWQGYVYFAGLLVF
Ga0318561_1020703033300031679SoilVSVRTPDSGFDSLERYDSLLLLAPYLLLAVPLIPYALSQSPTAGAFGITAGVAAAAAA
Ga0318561_1061269623300031679SoilVTVRTPDSGFENLERRYESVARWVPYLLLVAPFIPYILSQSPSAGALGITVGVAAGAGVWVAWMVVLHPGPPRRPWQGYVYFAGLLVFIAVL
Ga0318561_1076036613300031679SoilVTVRTPDSGFESLERRFQRIDRFIPYLLLAFPLLPYVLSQNPSAGAVGITVGIAVAAGAWIMWMVFLHPGWAERRW
Ga0318574_1009415813300031680SoilVSVRTPDSGFDSLERYDSLLLLAPYLLLAVPLIPYALSQSPTAGAFGITAGVAAAAAAWITWTIRLHRDWME
Ga0318574_1095046323300031680SoilVTVRTPDSGFENLERRYESVARWVPYMLLVAPFIPYILSQAPSAGALGITVG
Ga0318572_1017264013300031681SoilVTVRTPDSSLESLDRRYESMMRVVPYLVLSVPLLPYLVSQSPTAGAFGIT
Ga0310686_10874713113300031708SoilVKLRTPDSDFEVLERRFDSMIRLIVYLLLVVPLIPYVLSQSPSPGALGITVGVAVAAGAWYTWMVILHQAPAATATPTVMPSA
Ga0307476_1104068113300031715Hardwood Forest SoilVTVRTPDSGFESIEHRYERLERFLPLLLLAVPLVPYVISQSPTAGAFGITAGVAVAAG
Ga0307469_1027435633300031720Hardwood Forest SoilVRTPDSGFEPLELRFERLQRLVPYLLLTFPLIPYVLSQNPSAGAVGITVGVAVAAGAWITWWISLHPAWGD
Ga0318500_1032323313300031724SoilVSVRTPDSGFDSLERYDSLLLLAPYLLLAVPLIPYALSQSPTAGAFGITAGVAAAAAAWITWTIRLHRGWME
Ga0318501_1063184223300031736SoilVTVRTPDSGFENIERRHESVARVVPYLVLVVPLIPYVLSQNPSAGALGITVGTAVAAGAWYTGMVILRPGWVQRPWLMRFYFAVLVVLIALLTFRTP
Ga0307475_1116164313300031754Hardwood Forest SoilVTVRTPDSSLESMEQRYDSLLRLLPFLLLTVPLLPYFLAQSPTAGAFGITAGVAAAAGAWITWMVILHPGWAERPWP
Ga0318535_1042493723300031764SoilVSAVTVRTPDSGFEAVEQRYESLSRVIPFLLLAFPLIPYVISQNPSAGAVGITVGIAAAAGAWVTWMVVLEPGWMQGPWPRR
Ga0318554_1070418823300031765SoilVTVRTPDSGFENLERRYESVARWVPYLLLVAPFIPYVLSQAPSAGAFGITVGVAAGAGVW
Ga0318509_1043547423300031768SoilVTVRTPDSGFENLERRYESVARWVPYLLLVAPFIPYVLSQAPSAGAFGITVGVAAGARVWVAWMVVMHPGPPRRPWQGYVYFTGLLVFIAVLTFRSPW
Ga0318546_1132842913300031771SoilVTVRTPDSGFESLERRFQRIVRFIPYLLLAFPLLPYVLSQNPSAGAVGITVGIAVAAGAWIMWMVFLHPGWAERRWLM
Ga0318543_1023075813300031777SoilVTVRTPDSSLESLDRRYESMMRVVPYLVLSVPLLPYLVSQSPTAGAFGITVGLAVAAGAWITWFTVLHPGWANRR
Ga0318543_1057456113300031777SoilVTVRTPDSGLESLERRYESIMRVLPYPLLAVPLVPYALTQNPTAGAFAITAGIAVAAGAWIIWFLNLHPTWRDRPW
Ga0318566_1021012323300031779SoilVSVRTPDSGFDSLERYDSLLLLAPYLLLAVPLIPYALSQSPTAGAFGITAGVAAAAAAWMTW
Ga0318548_1005206513300031793SoilVSVRTPDSGFDSLERYDSLLLLAPYLLLAVPLIPYALSQSPTAGAFGITAGVAAAAAAWMTWT
Ga0318503_1014394423300031794SoilVTVRTPDSGFENLDRRYESVARWVPFLLLVVPFIPYVLSQAPSAGAVGI
Ga0318523_1048285023300031798SoilVTVRTPDSSLESLDRRYESMMRVVPYLVLSVPLLPYLVSQSPTAGAFGITVGLAVAAGAWITWFTVLHPGGANRRWLMRLYCA
Ga0318567_1025401513300031821SoilVTVRTPDSGLESLERRYESIMRVLPYPLLAVPLVPYALTQNPTAGAFAITAGIAVAAGAWIIWFLNL
Ga0318564_1012583513300031831SoilVTVRTPDSGFENLERRYESVARWVPYLLLVAPFIPYVLSQAPSAGAFGITVGVAAGARVW
Ga0318517_1018114323300031835SoilVTVRTPDSGFENLERRYESVARWVPYLLLVAPFIPYVLSQAPSAGAFGITVGVAAGAGVWVAWMVVLHPGPPRR
Ga0318511_1006895313300031845SoilVSVRTPDSGFDSLERYDSLLLLAPYLLLAVPLIPYALSQSPTAGAFGITAGVAAAAAAWMTWTIRLHRGWMERPWPRRVFFIGLIA
Ga0318512_1033584913300031846SoilVTVRTPDSGLESLERRYESIMRVLPYPLLAVPLVPYALTQNPTAGAFAITAGIAVAAGAWIIWFLN
Ga0318495_1013728633300031860SoilVSPVTVRTPDSGFEAVEQRYQSLTRVIPYLLLAVPLVPYALSQSPTAGAFGITVGIAVAAGAWATWVVVLHPDGTQRPW
Ga0306919_1094255123300031879SoilVTVRTPDSNLESVERRYELLLRLVPFLLLVFPLLPYALTQSPSAGALGITVGLA
Ga0306919_1121470723300031879SoilVSVRTPDSGFDSLERYDSLLLLAPYLLLAVPLIPYALSQSPTAGAFGITAGVAAAA
Ga0306925_1101855113300031890SoilVTVRTPDSGLESLERRYESIMRVLPYPLLAVPLVPYALTQNPTAGAFVITAGIA
Ga0318536_1058010623300031893SoilVTVRTPDSGFENLDRRYESVARWVPFLLLVVPFIPYVLSQAPSAGAVGITV
Ga0310912_1125327523300031941SoilVSPVTVRTPDSGFEAVEQRYQSLTRVIPYLLLAVPLVPYALSQSPTAGAFGITVGIAVAAGAWATWVVVLHPDGTQ
Ga0310913_1029730733300031945SoilVTVNTPDSGLESLERRYESIMRVLAYPLLAVPLIPYVLTQNPSAGAFAITAGIAAGAGAWVLWFHNLHP
Ga0310909_1133732123300031947SoilVTVRTPDSGFENLERRYESVARWVPYLLLVAPFIPYILSQAPSAGALGITVGVAAGAGVWVAWMVVLHPGPPRRPW
Ga0306926_1028331133300031954SoilVSVRTPDSGFDSLERYDSLLLLAPYLLLAVPLIPYALSQSPTAGAFGITAGVAAAAAAWITWTIRLHR
Ga0306922_1064427233300032001SoilVTVRTPDSGFENLERRYESVARWVPYLLLVAPFIPYVLSQAPSAGAFGITVGVAAGAGVWVAWMVVLHP
Ga0306922_1093577723300032001SoilVTVRTPDSSLESLDRRYESMMRVVPYLVLSVPLLPYLVSQSPTAGAFGITVGLAVAAGAWITWFTV
Ga0306922_1131621823300032001SoilVTVNTPDSGLESLEQRYESLLRVLPYVLLAVPLIPYGLAQSPAGGAFGITAGIAVAAAAWITWFIILH
Ga0318569_1013908113300032010SoilVTVRTPDSGFENLERRYESVARWVPYLLLVAPFIPYVLSQAPSAGALGITVGVAAGAGVWVAW
Ga0318569_1058813923300032010SoilVTVRTPDSGLESLERRYESIMRVLPYPLLAVPLVPYALTQNPTAGAFVITAGIAVAAGAWITWFLNLHPAW
Ga0318507_1045868523300032025SoilVTVRTPDSNLESVERRYELLLRLVPFLLLVFPLLPYALTQSPSAGALGITVGLAAAAGAWITWIM
Ga0310911_1082153923300032035SoilVTVRTPDSGFENLERRYESVARWVPYLLLVAPFIPYVLSQAPSAGAFGITVGVAAGAGVWVAWMVVLHPGP
Ga0318559_1045482623300032039SoilVTVRTPDSGFENLERRYESVARWVPYLLLVAPFIPYILSQAPSAGALGITVGVAAGAGVWVAWMVVLHPGPPRRPWQGYVYFAGLLVFIAVLTFRS
Ga0318532_1027523313300032051SoilVTVRTPDSGFENLERRYESVARWVPYLLLVAPFIPYVLSQAPSAGAFGITVGVAAGAGVWVAWMVV
Ga0318510_1034951113300032064SoilVTVRTPDSSLESLDRRYESMMRVVPYLVLSVPLLPYLVSQSPTAGAFGITVGLAVAAGAWITWFTVLHPGWAN
Ga0318524_1010827233300032067SoilVTVRTPDSGFENLERRYESVARWVPYLLLVAPFIPYILSQSPSAGALGITVGVAAGAGVWVAWM
Ga0308173_1159837123300032074SoilVSAVTVRTPDSGFESLEQRYESLSRIIPYLLLTIPLIPYALSQSPTAGAFGITAGIAAAAGA
Ga0306924_1199075123300032076SoilVSAVTVRTPDSGFEAVEQRYESLSRVIPFLLLAFPLIPYVISQNPSAGAVGITVGIAAAAGAWVTWMVVLEPGWMQG
Ga0318525_1046954313300032089SoilVTVNTPDSGLESLERRYESIMRVLPYPLLAVPLVPYVLTQGPGAGAFAITAGIAAAAGAWILWFH
Ga0307470_1021615913300032174Hardwood Forest SoilVNAVTVRTPDSGFENLERRYESVARLVPYLLLVVPFIPYVLSQAPSAGAIGITVGVAAAAGAWVAWM
Ga0307471_10373241823300032180Hardwood Forest SoilVTVRTPDSGLESLERRYESIMQWIPYLVLAVPLLPYALTQGPSAGAAGITVGVAVAAAAWITWFTVL
Ga0335085_1072746513300032770SoilVTVRTPDSGFENLERRYESVARWVPYLLLVAPFLPYVISQAPSAGAFGITVGVAAAAGAWVAWMVFLHP
Ga0335081_1030611613300032892SoilVTVRTPDSGFENLERRYESVARWVPYLLLVAPFIPYVLSQAPSAGAFGITVGVAAGAGVWVAWMVVLHPGPPRRPWQGYVYFA
Ga0335075_1071301213300032896SoilMTVRTPDSGIESMEQRYDTLLRLLPFLLLTVPLLPYFLSQRPTVGAFGITVGVAVAAGAWITWMVILHPGWAKRPW
Ga0335071_1052574233300032897SoilVSAVTVRTPDSGFENLERRYESVARWVPYLLLVAPFIPYVLSQAPSAGAFGITA
Ga0335077_1017148313300033158SoilVTVRTPDSGFENLERRYESVARWVPYLLLVAPFIPYVLSQAPSAGAFGITV
Ga0310914_1021389033300033289SoilVTVRTPDSGFENIERRHESVARVVPYLVLVVPLIPYVLSQNPSAGALGITVGT
Ga0318519_1005017933300033290SoilVSVRTPDSGFDSLERYDSLLLLAPYLLLAVPLIPYALSQSPTAGAFGITAGVAAAAAAWMTWTI
Ga0318519_1016420833300033290SoilVTVRTPDSGFENLERRYESVARWVPYLLLVAPFIPYVLSQAPSAGAFGITVGV


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.