Metagenome / Metatranscriptome Family F031018

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F031018
Family Type	Metagenome / Metatranscriptome
Number of Sequences	183
Average Sequence Length	42 residues
Representative Sequence	MQGTAEFHHQIADALLPQADPVFHDATALDTAVDMLDPQPT
Number of Associated Samples	133
Number of Associated Scaffolds	183

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	88.89 %
% of genes near scaffold ends (potentially truncated)	69.95 %
% of genes from short scaffolds (< 2000 bps)	86.34 %
Associated GOLD sequencing projects	122
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Bacteria (77.596 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (38.251 % of family members)
Environment Ontology (ENVO)	Unclassified (49.180 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (64.481 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74 1JGI10213J12805_100122291 2JGI1027J12803_1023455532 3JGI1027J12803_1032975721 4JGI10216J12902_1232822162 5C688J18823_108459162 6JGIcombinedJ26739_1005033162 7Ga0066398_102236541 8Ga0066395_102985813 9Ga0066684_108993771 10Ga0066675_104096872 11Ga0065705_101580644 12Ga0065705_104443033 13Ga0070673_1019949302 14Ga0070708_1022148141 15Ga0070706_1009784391 16Ga0070698_1007846542 17Ga0070699_1001516511 18Ga0070699_1002032113 19Ga0070693_1014283941 20Ga0066905_1018006551 21Ga0075417_102107172 22Ga0075421_1023392032 23Ga0075425_1002080892 24Ga0075425_1010525243 25Ga0075425_1021607951 26Ga0075434_1002529871 27Ga0075419_111781042 28Ga0066710_1014804721 29Ga0099829_100457571 30Ga0099829_101298002 31Ga0099829_112225741 32Ga0099829_115355672 33Ga0099830_108145132 34Ga0099828_102175323 35Ga0099828_114672021 36Ga0099827_104521112 37Ga0099827_106388671 38Ga0099827_108477651 39Ga0099827_110308141 40Ga0099827_114258031 41Ga0099827_116891692 42Ga0111539_101270343 43Ga0111539_113493281 44Ga0111539_119991371 45Ga0105245_132705082 46Ga0075418_112228921 47Ga0075418_119416562 48Ga0075418_127075361 49Ga0075418_127616702 50Ga0075418_127995921 51Ga0105247_100214218 52Ga0099792_103539622 53Ga0099792_111177211 54Ga0114129_123588461 55Ga0075423_106811141 56Ga0105249_115440392 57Ga0105070_10064661 58Ga0105072_10961632 59Ga0105085_10788022 60Ga0105064_10382973 61Ga0105068_10119511 62Ga0126384_104966052 63Ga0126382_115309531 64Ga0126370_119699212 65Ga0126376_106891533 66Ga0126376_126133342 67Ga0126372_108582323 68Ga0126378_132076661 69Ga0126377_122785751 70Ga0134124_120710491 71Ga0126383_127647851 72Ga0134127_131727311 73Ga0105246_119624151 74Ga0137393_110672951 75Ga0137389_106013451 76Ga0137389_110517262 77Ga0137389_117032263 78Ga0137319_11162741 79Ga0137388_114159951 80Ga0137383_101137935 81Ga0137383_104664181 82Ga0137383_106395812 83Ga0137383_108047831 84Ga0137383_108105481 85Ga0137365_104972582 86Ga0137365_105009221 87Ga0137374_106840483 88Ga0137380_115449552 89Ga0137381_101588323 90Ga0137381_102955731 91Ga0137379_108504391 92Ga0137378_109553131 93Ga0150985_1094586711 94Ga0150985_1202163931 95Ga0137387_105843991 96Ga0137367_110532421 97Ga0137366_104203952 98Ga0137371_106910162 99Ga0137384_108490371 100Ga0137384_108826551 101Ga0137368_105379363 102Ga0137385_113475691 103Ga0137375_106204201 104Ga0137360_100786424 105Ga0137361_101406172 106Ga0137361_108903641 107Ga0137361_113890461 108Ga0137361_114299511 109Ga0137390_104277473 110Ga0150984_1121969691 111Ga0150984_1162518192 112Ga0157337_10020161 113Ga0137373_109751491 114Ga0157306_103896733 115Ga0157297_104172533 116Ga0137396_104236413 117Ga0137404_109971092 118Ga0137407_109195432 119Ga0137410_101027723 120Ga0137410_103604771 121Ga0126375_102314901 122Ga0164307_101111501 123Ga0137405_13303221 124Ga0137405_13970295 125Ga0137409_102432133 126Ga0137409_108602693 127Ga0137403_114080761 128Ga0134089_103510992 129Ga0182032_105664262 130Ga0187853_104234062 131Ga0184623_103772951 132Ga0190268_107072242 133Ga0190268_113211132 134Ga0190271_128056352 135Ga0184643_10353771 136Ga0179596_106264341 137Ga0210386_114504481 138Ga0207684_100674343 139Ga0207684_106226261 140Ga0207684_111601832 141Ga0207646_116684061 142Ga0207665_108103762 143Ga0207639_109602292 144Ga0207708_107205682 145Ga0209877_10032683 146Ga0209466_10838071 147Ga0209588_11534383 148Ga0209180_104228582 149Ga0209180_105534492 150Ga0209814_102716242 151Ga0209465_104128662 152Ga0209283_105125641 153Ga0209283_106219551 154Ga0209481_101732482 155Ga0209590_100849831 156Ga0209590_104153252 157Ga0209590_106521461 158Ga0209590_107318472 159Ga0209590_108206372 160Ga0207428_107543032 161Ga0247820_109638981 162Ga0311371_109568803 163Ga0308203_10378331 164Ga0308198_10907381 165Ga0308197_103475052 166Ga0308199_10006554 167Ga0308187_100390831 168Ga0308182_10027253 169Ga0318560_103233793 170Ga0307413_106329511 171Ga0307410_108336842 172Ga0306919_106847852 173Ga0307406_109180273 174Ga0307406_113950981 175Ga0307409_1029165932 176Ga0307416_1005917731 177Ga0307414_120127281 178Ga0307411_121083741 179Ga0310906_100529021 180Ga0326721_101878831 181Ga0326721_107465401 182Ga0307471_1007537763 183Ga0307472_1013467772
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74 1JGI10213J12805_100122291 2JGI1027J12803_1023455532 3JGI1027J12803_1032975721 4JGI10216J12902_1232822162 5C688J18823_108459162 6JGIcombinedJ26739_1005033162 7Ga0066398_102236541 8Ga0066395_102985813 9Ga0066684_108993771 10Ga0066675_104096872 11Ga0065705_101580644 12Ga0070673_1019949302 13Ga0070708_1022148141 14Ga0070706_1009784391 15Ga0070698_1007846542 16Ga0070699_1001516511 17Ga0070699_1002032113 18Ga0070693_1014283941 19Ga0075425_1002080892 20Ga0075425_1021607951 21Ga0075434_1002529871 22Ga0075419_111781042 23Ga0066710_1014804721 24Ga0099829_100457571 25Ga0099829_112225741 26Ga0099829_115355672 27Ga0099828_102175323 28Ga0099828_114672021 29Ga0099827_104521112 30Ga0099827_106388671 31Ga0099827_108477651 32Ga0099827_110308141 33Ga0099827_114258031 34Ga0099827_116891692 35Ga0111539_101270343 36Ga0111539_113493281 37Ga0111539_119991371 38Ga0075418_112228921 39Ga0075418_119416562 40Ga0075418_127075361 41Ga0075418_127616702 42Ga0075418_127995921 43Ga0099792_103539622 44Ga0099792_111177211 45Ga0114129_123588461 46Ga0075423_106811141 47Ga0105249_115440392 48Ga0105070_10064661 49Ga0105072_10961632 50Ga0105085_10788022 51Ga0105064_10382973 52Ga0105068_10119511 53Ga0126384_104966052 54Ga0126382_115309531 55Ga0126370_119699212 56Ga0126376_106891533 57Ga0126376_126133342 58Ga0126372_108582323 59Ga0134127_131727311 60Ga0105246_119624151 61Ga0137389_110517262 62Ga0137389_117032263 63Ga0137319_11162741 64Ga0137383_101137935 65Ga0137383_106395812 66Ga0137383_108047831 67Ga0137365_104972582 68Ga0137368_105379363 69Ga0137375_106204201 70Ga0137360_100786424 71Ga0137361_108903641 72Ga0157337_10020161 73Ga0137373_109751491 74Ga0157297_104172533 75Ga0137410_101027723 76Ga0137409_108602693 77Ga0137403_114080761 78Ga0182032_105664262 79Ga0190268_107072242 80Ga0190268_113211132 81Ga0179596_106264341 82Ga0207665_108103762 83Ga0209466_10838071 84Ga0209283_106219551 85Ga0209481_101732482 86Ga0209590_107318472 87Ga0311371_109568803 88Ga0308187_100390831 89Ga0318560_103233793 90Ga0306919_106847852 91Ga0307416_1005917731 92Ga0307471_1007537763 93Ga0307472_1013467772
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40. 1Ga0066905_1018006551 2JGI10213J12805_100122291 3JGI1027J12803_1023455532 4JGI1027J12803_1032975721 5JGI10216J12902_1232822162 6C688J18823_108459162 7Ga0066398_102236541 8Ga0066395_102985813 9Ga0066684_108993771 10Ga0066675_104096872 11Ga0065705_101580644 12Ga0070673_1019949302 13Ga0070708_1022148141 14Ga0070706_1009784391 15Ga0070698_1007846542 16Ga0070699_1001516511 17Ga0070699_1002032113 18Ga0070693_1014283941 19Ga0075417_102107172 20Ga0075425_1002080892 21Ga0075425_1010525243 22Ga0075425_1021607951 23Ga0075434_1002529871 24Ga0075419_111781042 25Ga0099829_100457571 26Ga0099829_101298002 27Ga0099829_115355672 28Ga0099830_108145132 29Ga0099828_102175323 30Ga0099827_106388671 31Ga0099827_108477651 32Ga0099827_114258031 33Ga0099827_116891692 34Ga0111539_101270343 35Ga0111539_113493281 36Ga0111539_119991371 37Ga0075418_112228921 38Ga0075418_119416562 39Ga0075418_127075361 40Ga0075418_127616702 41Ga0075418_127995921 42Ga0105247_100214218 43Ga0099792_103539622 44Ga0099792_111177211 45Ga0114129_123588461 46Ga0075423_106811141 47Ga0105249_115440392 48Ga0105072_10961632 49Ga0105085_10788022 50Ga0105064_10382973 51Ga0105068_10119511 52Ga0126384_104966052 53Ga0126382_115309531 54Ga0126370_119699212 55Ga0126376_106891533 56Ga0126376_126133342 57Ga0126372_108582323 58Ga0126378_132076661 59Ga0126377_122785751 60Ga0126383_127647851 61Ga0134127_131727311 62Ga0105246_119624151 63Ga0137393_110672951 64Ga0137389_110517262 65Ga0137389_117032263 66Ga0137319_11162741 67Ga0137383_101137935 68Ga0137383_104664181 69Ga0137383_106395812 70Ga0137383_108047831 71Ga0137365_104972582 72Ga0137365_105009221 73Ga0137374_106840483 74Ga0137380_115449552 75Ga0137381_101588323 76Ga0137381_102955731 77Ga0137379_108504391 78Ga0137378_109553131 79Ga0150985_1094586711 80Ga0150985_1202163931 81Ga0137367_110532421 82Ga0137366_104203952 83Ga0137384_108490371 84Ga0137368_105379363 85Ga0137375_106204201 86Ga0137360_100786424 87Ga0137361_101406172 88Ga0137361_108903641 89Ga0137361_113890461 90Ga0137361_114299511 91Ga0157337_10020161 92Ga0137373_109751491 93Ga0157306_103896733 94Ga0157297_104172533 95Ga0137396_104236413 96Ga0137404_109971092 97Ga0137410_101027723 98Ga0137405_13303221 99Ga0137405_13970295 100Ga0137403_114080761 101Ga0134089_103510992 102Ga0182032_105664262 103Ga0187853_104234062 104Ga0184623_103772951 105Ga0190268_107072242 106Ga0190268_113211132 107Ga0184643_10353771 108Ga0179596_106264341 109Ga0210386_114504481 110Ga0207684_100674343 111Ga0207684_106226261 112Ga0207684_111601832 113Ga0207665_108103762 114Ga0207639_109602292 115Ga0209877_10032683 116Ga0209466_10838071 117Ga0209283_105125641 118Ga0209283_106219551 119Ga0209481_101732482 120Ga0209590_104153252 121Ga0209590_106521461 122Ga0209590_107318472 123Ga0209590_108206372 124Ga0247820_109638981 125Ga0311371_109568803 126Ga0308198_10907381 127Ga0308197_103475052 128Ga0308187_100390831 129Ga0308182_10027253 130Ga0318560_103233793 131Ga0307410_108336842 132Ga0306919_106847852 133Ga0307416_1005917731 134Ga0307411_121083741 135Ga0307471_1007537763 136Ga0307472_1013467772
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 33.33% β-sheet: 0.00% Coil/Unstructured: 66.67%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 183 Family Scaffolds
PF13561	adh_short_C2	2.73
PF12759	HTH_Tnp_IS1	2.19
PF00496	SBP_bac_5	1.64
PF13610	DDE_Tnp_IS240	1.09
PF16868	NMT1_3	1.09
PF01850	PIN	1.09
PF13613	HTH_Tnp_4	1.09
PF13546	DDE_5	1.09
PF13358	DDE_3	1.09
PF03400	DDE_Tnp_IS1	1.09

Showing 1 to 10 of 59 entries

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COG ID	Name	Functional Category	% Frequency in 183 Family Scaffolds
COG1662	Transposase and inactivated derivatives, IS1 family	Mobilome: prophages, transposons [X]	1.09
COG1940	Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain	Transcription [K]	1.09
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	1.09
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.55
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.55
COG5588	Uncharacterized conserved protein, DUF1326 domain	Function unknown [S]	0.55
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.55
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.55
COG4826	Serine protease inhibitor	Posttranslational modification, protein turnover, chaperones [O]	0.55
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.55

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	77.60 %
Unclassified	root	N/A	22.40 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	77.60 %
Unclassified	root	N/A	22.40 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	77.60 %
Unclassified	root	N/A	22.40 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.19 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	9.84 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.64 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	7.10 %
Unclassified	root	N/A	22.40 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	1.09 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.64 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.83 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.09 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.55 %
Candidatus Omnitrophica	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica	1.09 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.09 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	6.01 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	2.19 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.09 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.55 %
Unclassified	root	N/A	22.40 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.55 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.55 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.09 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.55 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	1.64 %
Chloroflexi incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis	0.55 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	6.01 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.19 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.09 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	1.09 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.55 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.09 %
Unclassified	root	N/A	22.40 %
unclassified Candidatus Omnitrophica	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → unclassified Candidatus Omnitrophica	1.09 %

Name	Rank	Taxonomy	Distribution
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.55 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.55 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.55 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.09 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.55 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.55 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	1.64 %
Candidatus Omnitrophica bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → unclassified Candidatus Omnitrophica → Candidatus Omnitrophica bacterium	1.09 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	0.55 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.55 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	1.09 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.55 %
SAR202 cluster	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster	0.55 %
Unclassified	root	N/A	22.40 %
unclassified Cyanobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria	4.92 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	1.09 %

Name	Rank	Taxonomy	Distribution
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.55 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.55 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.55 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.09 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.55 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1.64 %
Candidatus Omnitrophica bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → unclassified Candidatus Omnitrophica → Candidatus Omnitrophica bacterium	1.09 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	0.55 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	4.37 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.09 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	0.55 %
Methylocaldum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylocaldum	1.09 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	0.55 %
SAR202 cluster bacterium AC-409-J13_OGT_754m	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium AC-409-J13_OGT_754m	0.55 %
Skermanella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella	0.55 %
Unclassified	root	N/A	22.40 %
unclassified Hyphomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae	0.55 %

Name	Rank	Taxonomy	Distribution
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.55 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.55 %
Afipia carboxidovorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia carboxidovorans	0.55 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.09 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.55 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1.64 %
Candidatus Omnitrophica bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → unclassified Candidatus Omnitrophica → Candidatus Omnitrophica bacterium	1.09 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	0.55 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	4.37 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.09 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	0.55 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.55 %
Methylocaldum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylocaldum	1.09 %
Planctomyces	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Planctomyces	0.55 %
SAR202 cluster bacterium AC-409-J13_OGT_754m	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium AC-409-J13_OGT_754m	0.55 %
Skermanella aerolata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella aerolata	0.55 %
Unclassified	root	N/A	22.40 %

Name	Rank	Taxonomy	Distribution
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.55 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.55 %
Afipia carboxidovorans OM5	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia carboxidovorans → Afipia carboxidovorans OM5	0.55 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.09 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.55 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1.64 %
Candidatus Omnitrophica bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → unclassified Candidatus Omnitrophica → Candidatus Omnitrophica bacterium	1.09 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	0.55 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	4.37 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.09 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	0.55 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.55 %
Methylocaldum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylocaldum	1.09 %
SAR202 cluster bacterium AC-409-J13_OGT_754m	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium AC-409-J13_OGT_754m	0.55 %
Skermanella aerolata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella aerolata	0.55 %
Unclassified	root	N/A	22.40 %
unclassified Planctomyces	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Planctomyces → unclassified Planctomyces	0.55 %

Name	Rank	Taxonomy	Distribution
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.55 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.55 %
Afipia carboxidovorans OM5	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia carboxidovorans → Afipia carboxidovorans OM5	0.55 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.09 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.55 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1.64 %
Candidatus Omnitrophica bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → unclassified Candidatus Omnitrophica → Candidatus Omnitrophica bacterium	1.09 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	0.55 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	4.37 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.09 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	0.55 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.55 %
Methylocaldum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylocaldum	1.09 %
Planctomyces sp.	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Planctomyces → unclassified Planctomyces → Planctomyces sp.	0.55 %
SAR202 cluster bacterium AC-409-J13_OGT_754m	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium AC-409-J13_OGT_754m	0.55 %
Skermanella aerolata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella aerolata	0.55 %
Unclassified	root	N/A	22.40 %

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000858\|JGI10213J12805_10012229	All Organisms → cellular organisms → Bacteria	876	Open in IMG/M
3300000955\|JGI1027J12803_102345553	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300000955\|JGI1027J12803_103297572	All Organisms → cellular organisms → Bacteria	781	Open in IMG/M
3300000956\|JGI10216J12902_123282216	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300001686\|C688J18823_10845916	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300002245\|JGIcombinedJ26739_100503316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	1088	Open in IMG/M
3300004268\|Ga0066398_10223654	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300004633\|Ga0066395_10298581	All Organisms → cellular organisms → Bacteria	880	Open in IMG/M
3300005179\|Ga0066684_10899377	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300005187\|Ga0066675_10409687	All Organisms → cellular organisms → Bacteria	1002	Open in IMG/M

Showing 1 to 10 of 171 entries

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	78.69%
Host-Associated	Host-Associated	21.31%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	2.19%
Plants	Host-Associated → Plants	21.31%
Terrestrial	Environmental → Terrestrial	76.50%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	1.09%
Peat	Environmental → Terrestrial → Peat	0.55%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.19%
Rhizosphere	Host-Associated → Plants → Rhizosphere	19.13%
Sediment	Environmental → Aquatic → Sediment	1.09%
Soil	Environmental → Terrestrial → Soil	75.96%

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.09%
Loam	Environmental → Terrestrial → Soil → Loam	10.38%
Sand	Environmental → Terrestrial → Soil → Sand	3.28%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.55%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.64%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.30%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	17.49%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.09%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.09%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.55%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.55%

Habitat	Taxonomy	Distribution
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.09%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.56%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.55%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.28%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.28%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.83%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.55%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	54.10%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	17.49%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	3.28%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.64%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.09%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.09%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.09%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.55%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.55%

Habitat	Taxonomy	Distribution
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.55%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.09%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.09%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.55%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.56%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.55%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.55%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.55%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	3.28%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.55%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.55%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.09%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.09%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.55%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.55%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	10.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	4.37%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.28%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.09%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.55%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.55%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.09%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.09%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.55%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.09%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.46%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.73%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	38.25%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000858	Soil microbial communities from Great Prairies - Wisconsin Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10213J12805_100122291	3300000858	Soil	MQGTAQFHHEITDARLPQPDPVFHNAAALDAAVDMLNPQPAV
JGI1027J12803_1023455532	3300000955	Soil	MQGTADFHNDIADALLPQPDPIFDDAATLDTAVDMLDPEPAIVQCLVGELLLQQ*
JGI1027J12803_1032975721	3300000955	Soil	MVQGTTACQDEITDALLPQADPVLHDAAALDTAVDMLDPQ
JGI10216J12902_1232822162	3300000956	Soil	MQGTADLHHQIADALLPQPDPVFDKATALHTAVHMLA
C688J18823_108459162	3300001686	Soil	MQGTADFHHDITDALLPQVDPVFDDAATLDTAVDMLDPQSAGVEGLVGSLLRQWQLVVSWSA*
JGIcombinedJ26739_1005033162	3300002245	Forest Soil	MQXTADFHHQITDAPLPQPNPIFDDATALDTTIDMLNSKTAVMQ*
Ga0066398_102236541	3300004268	Tropical Forest Soil	VQGTAQFHHEIADTLLPQAHAVFDDATALDTAVDMLDPEPPLVER
Ga0066395_102985813	3300004633	Tropical Forest Soil	MMQITAEFHHQSADTLLPQAEPVFDNATALHTAVDMLDP*
Ga0066684_108993771	3300005179	Soil	MERTTEFHHEITDAVLPQPEPVFRDAAALDTAVDRLDPQPTLV
Ga0066675_104096872	3300005187	Soil	MQATADFHHEIADTRLPQADPVLHDPTVLDTAVDMLDPQPTLVQ
Ga0065705_101580644	3300005294	Switchgrass Rhizosphere	MQGTADLHHQSADTLLPQADAVFDDATALDTAIDMLDPQP
Ga0065705_104443033	3300005294	Switchgrass Rhizosphere	MQGTADFHNDIADALLPQPDPIFDDAATLDTAVDMLDPEPAIVQCLVGELLLQQ
Ga0070673_1019949302	3300005364	Switchgrass Rhizosphere	MQGTADFHHDITNALFPQADPIFDDATTLDTAVDMLDPQSA
Ga0070708_1022148141	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MQGTTEFHDQIADTLLPQADPVLHDAAALDTAIDVLDAQPTL
Ga0070706_1009784391	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MQGTAEFHHEIAHAVLPQPDPVFDDATTLHATVDMLDPQPT
Ga0070698_1007846542	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MQGTADLHHHIADALLPEADPIFHNATTLHATVDMLDAERVSISD*
Ga0070699_1001516511	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MQGTTDFHHEIADALLPQAEPVFDHAATLDTTVDMLDPQP
Ga0070699_1002032113	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MQGTTEFHHQITDPLFPQADPVFHDATALHTTIDMLDPEPPL
Ga0070693_1014283941	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MVQGTTARQDEITDALLPQADPVFDDATALDTAVDMLDPQSAGVERLVGSLLRR*
Ga0066905_1018006551	3300005713	Tropical Forest Soil	MQGTAEFHHQIADALLPQADPVFHDATALDTAVDMLDPQPT
Ga0075417_102107172	3300006049	Populus Rhizosphere	MQGTADLHHHIADALLPQADPVFDDATALDTAVDRLDP*
Ga0075421_1023392032	3300006845	Populus Rhizosphere	MQGTADFHHDIPDALLPQADPVFDDATALDAAVDMLDPQSAGVERLVGSLL
Ga0075425_1002080892	3300006854	Populus Rhizosphere	MQGTVEFHPEIADTVHPQPDPVFDDTTALDAAVDMLDP*
Ga0075425_1010525243	3300006854	Populus Rhizosphere	MQGAADFHHQIADTRLPQADPVFDDAAALDTAVDMLD
Ga0075425_1021607951	3300006854	Populus Rhizosphere	QGTAQFHHYITDTCFPQADPVFHDATALHATVDMLN*
Ga0075434_1002529871	3300006871	Populus Rhizosphere	MQRTADFHDEIADALLPQTDPVFDDATTFHTAVDMLNPQP
Ga0075419_111781042	3300006969	Populus Rhizosphere	MQGTAEFHHQITNPLLPQAEPVLHNATTLDAAVHMLDPE
Ga0066710_1014804721	3300009012	Grasslands Soil	MQGTADFHHDIADTFLPQAEPIFHDTAALDTAVDMLDPQ
Ga0099829_100457571	3300009038	Vadose Zone Soil	MQGTTDLHDQIADVLFPQADPVFHNATALDTPVDMLNAQSAIVQGL
Ga0099829_101298002	3300009038	Vadose Zone Soil	MQGTADVHHQIADTLLPQAESVFDDATALHTPVDMLDPQPT
Ga0099829_112225741	3300009038	Vadose Zone Soil	MQSTTDLHHQIADALLPQADPVFDDATALDTTIDMLNPQPAVGERLIGPE*
Ga0099829_115355672	3300009038	Vadose Zone Soil	VQGTTEFHHEITDAILPQADPVFDNATTLHAAVDMLDP
Ga0099830_108145132	3300009088	Vadose Zone Soil	VQGTTEFHHEIADALLPQADPVLDDAATLDTPVDMLNPQPTLV
Ga0099828_102175323	3300009089	Vadose Zone Soil	MERTAAFHHESADALLPEADPVFDEATALDTAVDLLDP*
Ga0099828_114672021	3300009089	Vadose Zone Soil	MQGTTECHHEIADAVLPQPDAVFHNAAALDAAIDMLD
Ga0099827_104521112	3300009090	Vadose Zone Soil	MQGTADFHYDIADTLFPQPDPIFHDAATFDTAVHMLDPEPAIV*
Ga0099827_106388671	3300009090	Vadose Zone Soil	MQGTTAFHHQIADTRLPEADSVFDDATALDTAVHVLDSVTGG
Ga0099827_108477651	3300009090	Vadose Zone Soil	TAEFHHQIADALLPQADAVFDNPTVLHTAVDMLDPHRR*
Ga0099827_110308141	3300009090	Vadose Zone Soil	MQGTAQFHHEITDALLPEPDPVFHNATTLHATVDM
Ga0099827_114258031	3300009090	Vadose Zone Soil	MQGTAQFHDEIANAGLPQADAVFDDATTLHAAVDMLDPEPAIV*
Ga0099827_116891692	3300009090	Vadose Zone Soil	MQGTADVHHDITEALLPQTNPVFDKATALDTAVARLAPQPA
Ga0111539_101270343	3300009094	Populus Rhizosphere	MLGTADFHHEIAAAVLPQPHPVFDDPTALDAAVDMLDSAADAD*
Ga0111539_113493281	3300009094	Populus Rhizosphere	MQGTAQFHHELSDTRLPQPNPVFDDPTTLDTAIHMLDA
Ga0111539_119991371	3300009094	Populus Rhizosphere	MQGTAAFHHEIAAPGLPPAAPVFDDAAARDADVDRLAPPPTVV
Ga0105245_132705082	3300009098	Miscanthus Rhizosphere	MVQGTTARQDEITDALLPQADPVFDDATALDTAVDMLDPQSAGVE
Ga0075418_112228921	3300009100	Populus Rhizosphere	MQGAAEFHHQIADALFPQADAVFDNATALDTAGDMRDPQPAAEQFYALAA*
Ga0075418_119416562	3300009100	Populus Rhizosphere	MQCTAEFHHQIAYALVPEADPVFDTATALDTAIDMLNPQPALVQRLVRHVLLQC*
Ga0075418_127075361	3300009100	Populus Rhizosphere	MESTTEFHHEITDALLPQADPVFDDATALHTAVDMLNAQSTIVQGLIGQLL
Ga0075418_127616702	3300009100	Populus Rhizosphere	TTELHDEITNPHFPQADPIFDDATALHTAIDVLDPPSAMV*
Ga0075418_127995921	3300009100	Populus Rhizosphere	RSQPHPDVMQGTATCHHQSTDAVLPQADPVFHNPTALDAAVDMLDS*
Ga0105247_100214218	3300009101	Switchgrass Rhizosphere	MQGTADFHYDIADTLFPQPDPIFHDAATLDTAVNMLDPEPTIV*
Ga0099792_103539622	3300009143	Vadose Zone Soil	MQGTTEFHHQIADARLSQADPVFDDAAALDTALDRLDPQ
Ga0099792_111177211	3300009143	Vadose Zone Soil	VQGTAEFHHQITNARLPQTDPVFDDATAFDATVHMLDAEPALV*
Ga0114129_123588461	3300009147	Populus Rhizosphere	MQGTAELHHQITNALLPQADPVFHQTTALDTAIDMLDPQPTLVQGL
Ga0075423_106811141	3300009162	Populus Rhizosphere	MQGTTDVHHDIADALLPEADPVFDNATALHATIHVL
Ga0105249_115440392	3300009553	Switchgrass Rhizosphere	MVQGTAELHHEIADALLPQADPVLHDATTLDAAVDM
Ga0105070_10064661	3300009815	Groundwater Sand	MQSTADLHHNIPHARLPQPDPVFDDATALDTAEGGRP
Ga0105072_10961632	3300009818	Groundwater Sand	MQGTTDFHYQIADALLPQTDPVFDDATALDAAVDMLNPQPTAVQ
Ga0105085_10788022	3300009820	Groundwater Sand	VQGTAYFHHNITDTLLPQTDPVFDDATTLDTTIDMLDPQPAVVQRLVGHLL
Ga0105064_10382973	3300009821	Groundwater Sand	MQSTADLHHNIPDIRLPQPDPVFDDATALDTAVDMLNAEPTLVQCL
Ga0105068_10119511	3300009836	Groundwater Sand	MQGTADLHHHIADTRLPQAQPVFDNATALDTTVDMLDA
Ga0126384_104966052	3300010046	Tropical Forest Soil	QRATECHHQITDALLPQADTVFHDATAFDTAVDVLDP*
Ga0126382_115309531	3300010047	Tropical Forest Soil	MQSTAEFHDQITDAFFPQADAVFDDATPLDTTIDMLDP
Ga0126370_119699212	3300010358	Tropical Forest Soil	MEGTAEFHHEITDALFPQAEPVFHNATTLDAAVDMLDPEPPLV
Ga0126376_106891533	3300010359	Tropical Forest Soil	VQGAAEFHHESADALFPQADPVFDDTTTLDTAVDMLDPQPAIVQSLVG*
Ga0126376_126133342	3300010359	Tropical Forest Soil	MVQGTAACHHESADALLPQADPVLHHATPFDAAADMLDPQ
Ga0126372_108582323	3300010360	Tropical Forest Soil	VEGTAAFHQQIADARLLQAEPVFHDTTALHTAVDMLDPEP
Ga0126378_132076661	3300010361	Tropical Forest Soil	MQGATEFHHEITDALLPQPHPVFDNTTTLDTTVDMLDPQ
Ga0126377_122785751	3300010362	Tropical Forest Soil	VQGTTEFHHQITDSLLPQADAVFDDATPLDTTIDMLDPQSTL
Ga0134124_120710491	3300010397	Terrestrial Soil	MVQGTTARQDEITDALLPQADPVLHDAAALDTAVDMRDPQ
Ga0126383_127647851	3300010398	Tropical Forest Soil	MQGTAQFHHEITDALLPQTDPVFDNAAALDTTVDM
Ga0134127_131727311	3300010399	Terrestrial Soil	MQGTAAFHHQITDALLPQADAVFHNAIAFDTAVDVLDPSSAIVQ
Ga0105246_119624151	3300011119	Miscanthus Rhizosphere	MQGTADFHHDITDILLPQADAVFDDTATLDAAVDMLDPQSAGVERLVGSLLRR
Ga0137393_110672951	3300011271	Vadose Zone Soil	MQGTTDFHHQIADALLPQADPVFDDATALDTTIDMLNPQPAVGERLIGPE*
Ga0137389_106013451	3300012096	Vadose Zone Soil	MQGTTDFHHQIADALLPQADPVFDDATALDTSIDMLNPQPAVGERLIGPE*
Ga0137389_110517262	3300012096	Vadose Zone Soil	MQGTADFHHQIADALLPQAKPVFDDATTLDTPVDMLDAQPTLVQRLVG
Ga0137389_117032263	3300012096	Vadose Zone Soil	MQGTTDVHHEIADAVLPQAEPVFPNATALDAPVDLLDPQPTVMQGLV
Ga0137319_11162741	3300012167	Soil	VHPEVVQGAAAFHRQIADAFFPEASAVFDNATPLDTAVHVL
Ga0137388_114159951	3300012189	Vadose Zone Soil	MQGTAKFHHEIADAVLPQPDPVFDDAAALDAPVDML
Ga0137383_101137935	3300012199	Vadose Zone Soil	MQRTAQFHHNIPDPLLPQTDPVFDDATPLDTTIDML
Ga0137383_104664181	3300012199	Vadose Zone Soil	MQGTAAFHHEIADALLPQPDPVFDDAAALDAAFDML
Ga0137383_106395812	3300012199	Vadose Zone Soil	MQRPAEFHHEIADALLLQAAPVFDDATAFDPAVDMLDP*
Ga0137383_108047831	3300012199	Vadose Zone Soil	MQRTTDGHHQIANTLLPQADAVFDDATALATPVAMLDS
Ga0137383_108105481	3300012199	Vadose Zone Soil	MQGTADFHHQIADTLLPQADPVFHDATAFDTAVDMLDP*
Ga0137365_104972582	3300012201	Vadose Zone Soil	MERTAEFHHNIPDPFLPEADPVFDNATALDTPVDMLNA*
Ga0137365_105009221	3300012201	Vadose Zone Soil	MQGTTDFHHEIADALLPQAEPVFDNATTLDTAIDMLDPQ
Ga0137374_106840483	3300012204	Vadose Zone Soil	VQGTAQFHHEITDALLPQADPVFHNATALDTAVDMLDPQPTLV
Ga0137380_115449552	3300012206	Vadose Zone Soil	MQGTAEFHHEIADTLLPQAEPVLHNTAALDTAIDVLDAQPT
Ga0137381_101588323	3300012207	Vadose Zone Soil	MQGTAEFHHEIADAVLPQPDPVFDDTAALDAAVDMLDPEPTVVQ
Ga0137381_102955731	3300012207	Vadose Zone Soil	MQGTAQFPHEITDAVLPQPAAVFDDAAAFDAAVDMLDPQPSL
Ga0137379_108504391	3300012209	Vadose Zone Soil	MQGTTECQHEIADAVLPQPDAVFHNAAALDAAIDMLDP*
Ga0137378_109553131	3300012210	Vadose Zone Soil	MQGTADFHHEIADTGLPQADPVFDDTTALDAAVDMLDPQPTVV
Ga0150985_1094586711	3300012212	Avena Fatua Rhizosphere	MQGTADFHHDITNTLLPQADPVFDDATALDTTVDMLDPQSAIVEQ*
Ga0150985_1202163931	3300012212	Avena Fatua Rhizosphere	MQGTADFHHAIPDTLLPQADPVFDDATALDAAVDMLDPQSA
Ga0137387_105843991	3300012349	Vadose Zone Soil	MQGTAEFHHEIADAVLPQPDPVFDDAAALDAAVDMLDPQPTVV
Ga0137367_110532421	3300012353	Vadose Zone Soil	MQGTAEFHHQITNALLPQAEPVLHDAAALDTAVDMLDPQPTVMQGMVG
Ga0137366_104203952	3300012354	Vadose Zone Soil	MQGTAEFHHQIANALLPQTDPVFDDATALDATVDMLDAQPTLVQGAA*
Ga0137371_106910162	3300012356	Vadose Zone Soil	MQGTTEFHHEIADAVLPQPDAVFHNAAALDAAIDMLDP*
Ga0137384_108490371	3300012357	Vadose Zone Soil	MQGTTDFHHEIAYALLPQTDPVFDDATALDTTVHVLDPQPT
Ga0137384_108826551	3300012357	Vadose Zone Soil	MQGTADLHHHIADALLPEADPIFHNATALHATVDMLDAEPTLVQ
Ga0137368_105379363	3300012358	Vadose Zone Soil	MQGTTEFHHDIADAVLPQPNAVFHDAAALDAAVDMLDAESAMVQ
Ga0137385_113475691	3300012359	Vadose Zone Soil	MQGTAAFHHEIADALLPQPDPVFDDAAALDAAVDMLDPQPTV
Ga0137375_106204201	3300012360	Vadose Zone Soil	VEGTTDFHHDIADALLPEADPGFDTATALDTAVDMFD
Ga0137360_100786424	3300012361	Vadose Zone Soil	MQGTTDFHHEIAGAFLLQAKPVFDDATALHTAVHMLDPQPT
Ga0137361_101406172	3300012362	Vadose Zone Soil	MQGTAQFHHDIADALLPQPDPVFDNATALDTAVDMLDP
Ga0137361_108903641	3300012362	Vadose Zone Soil	MQDTAEFHHDIADALLPEADPVFDDPTALHTAVDMLDPEPAVVQCLV
Ga0137361_113890461	3300012362	Vadose Zone Soil	MERTTDFHHEIADALLPQSDPAFDDATALDTTVDMLDPQPTL
Ga0137361_114299511	3300012362	Vadose Zone Soil	VQGTAEFHHQIADILLPQAEPVFDDAATLDTTVATLDPQ
Ga0137390_104277473	3300012363	Vadose Zone Soil	MQGTTEFHHEIADAILPQPDPVFHDAAALDAAVDM
Ga0150984_1121969691	3300012469	Avena Fatua Rhizosphere	MQGTADFHHDISNALLPQADPVFDDATALDAAVDMLDPQSAGVERLVG
Ga0150984_1162518192	3300012469	Avena Fatua Rhizosphere	MQGTADFHHDITDALLPQADFDDATALDTAVDMLDPQSAVVERLVDSLLCQWQLVVSWSA
Ga0157337_10020161	3300012483	Arabidopsis Rhizosphere	GTAEFHHQIADACLPQADAVVHDAATLDTTIDMLNP*
Ga0137373_109751491	3300012532	Vadose Zone Soil	VQGTAAFHHQITDPLLPQADPVLHYAAALDAPVDRLDPQPTL
Ga0157306_103896733	3300012912	Soil	MQGTTDFHHDIPDALFPQADPVFDDTATLDAAVDMLDPQ
Ga0157297_104172533	3300012914	Soil	MQGTADFHYDIPDALLPQADAVFDDTATLDAAVDMLDPRAA
Ga0137396_104236413	3300012918	Vadose Zone Soil	MQGAAEFHHDITDTLLPQTEAVFDNATTLHAAVDMLDP*
Ga0137404_109971092	3300012929	Vadose Zone Soil	MQGTADFHHDIADTFLPQAEPIFHDTAALDTAVDMLDPQPTLV*
Ga0137407_109195432	3300012930	Vadose Zone Soil	MQGTAEFHHEIADTVLPQPDPVFDDAAALDAAVDM
Ga0137410_101027723	3300012944	Vadose Zone Soil	MQGTVDFYHDIADTLLPQTDPVFDDTTALHAAVDMLDPQPAIVAQI*
Ga0137410_103604771	3300012944	Vadose Zone Soil	MQGTAQFHHEIADAVLPQPDPVFDDAAALDATVDM
Ga0126375_102314901	3300012948	Tropical Forest Soil	MERTTEFHHEIADTLLPQADPVFDDATALHTAVDMLNA
Ga0164307_101111501	3300012987	Soil	MQGTADFHHDITDALLPQADPVFDDATTLDTAVDMLDPQSAIVEHL
Ga0137405_13303221	3300015053	Vadose Zone Soil	VQGTAAFHHQITDARLPQADPVFHDATALHTTIDMLDPDIS
Ga0137405_13970295	3300015053	Vadose Zone Soil	MQGTTDFHHQIANTLLPQADPVFDDATALHTAVDMLDP*
Ga0137409_102432133	3300015245	Vadose Zone Soil	FYHDIADTLLPQTDPVFDDTTALHAAVDMLDPQPAIVAQI*
Ga0137409_108602693	3300015245	Vadose Zone Soil	MQGAAEFHHDITDTLLPQTDAVFDNATTLHAAVDML
Ga0137403_114080761	3300015264	Vadose Zone Soil	MMQSTTDGHHQTANTLLPQADAVFDEATARDTPVDMLDPPPAV*
Ga0134089_103510992	3300015358	Grasslands Soil	VQGATYFHHQIADALLPQANPVFDDATTLDTAVDMLDPQP
Ga0182032_105664262	3300016357	Soil	MWGTADLHHQVTDTLLPQANAVFDDPTAFDDTVDMLDLQPTLVELLV
Ga0187853_104234062	3300017940	Peatland	MQCAADFHHQISDALLPQPNPIFDDATALDTTIDMLNPKTA
Ga0184623_103772951	3300018056	Groundwater Sediment	MERPAEFHHEIADTCLPQADPVFDDATALDTAVDVLDP
Ga0190268_107072242	3300018466	Soil	MQGTAEFHHQITDALLPQAYPVLHDAAALDAAVDVL
Ga0190268_113211132	3300018466	Soil	VQGTAEFHEQIADALFPQPEAIFDDAAALDTAIDVLD
Ga0190271_128056352	3300018481	Soil	MQGTADFHHDIADALLPQADPVFDDAATLDAAVDMLDPQPAGVERLAGSLLRR
Ga0184643_10353771	3300019255	Groundwater Sediment	MQGTAEFHDQIADTLLPQADPVFHDATALDATVDML
Ga0179596_106264341	3300021086	Vadose Zone Soil	MVQGTAELPHEIADARLPQADPVFDDATALHTAVDMLDPQPTLVERQV
Ga0210386_114504481	3300021406	Soil	MQSTADFHHQITDAPLPQPNPIFDDATALDTTIDMLNAKTAVMQ
Ga0207684_100674343	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MQGTAEFHHDIADALLPQADPVFDDATALHTTVDMLDP
Ga0207684_106226261	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	KVMERTAEFHHEIADALLPEADPVFDDATALDTAVHMLDP
Ga0207684_111601832	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MQGTAEFHHEITDALLPQADPVFDDATALHTAVDVLDP
Ga0207646_116684061	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MQGTADLHHHIADALLPEADPIFHNATTLHATVDMLDAERVSISD
Ga0207665_108103762	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MEDVQGTAECQHDITDSLFPQMEPVFDDAAALDTTVDMLDA
Ga0207639_109602292	3300026041	Corn Rhizosphere	MQGTTEFHHEIADAVLPQPDPVFHDTAALDTAVDMLIRS
Ga0207708_107205682	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MQGTADFHYDIADTLFPQPEPIFHDAATLDTAVNMLDPEPTIV
Ga0209877_10032683	3300027032	Groundwater Sand	MQGTTEFHHKIADAFLPQPDPVLHDAAALDAAVDMLDPQ
Ga0209466_10838071	3300027646	Tropical Forest Soil	MQRAADFHHQIADARLPQAAGIVDDATALDTAVDMLDA
Ga0209588_11534383	3300027671	Vadose Zone Soil	MQGTADFHHDIADTFLPQAEPIFHDTAALDTAVDMLDPQP
Ga0209180_104228582	3300027846	Vadose Zone Soil	MQGTTEFHHQIADARLPQADPVFDDAAALDTALDRLDP
Ga0209180_105534492	3300027846	Vadose Zone Soil	MQGTAEFHHQIADARLPQADPVFHDATALDTAVDMLDP
Ga0209814_102716242	3300027873	Populus Rhizosphere	MQGTADLHHHIADALLPQADPVFDDATALDTAVDRLDP
Ga0209465_104128662	3300027874	Tropical Forest Soil	MMQITAEFHHQSADTLLPQAEPVFDNATALHTAVDMLDP
Ga0209283_105125641	3300027875	Vadose Zone Soil	MQSTTDFHHEITDTLLPQPDPVFDDATALDTTVDMLDP
Ga0209283_106219551	3300027875	Vadose Zone Soil	MQGTAEFHHQIADTLLPQADPVFDDAATLDTTVDM
Ga0209481_101732482	3300027880	Populus Rhizosphere	MWGTTDFHHQITDARLPQTDSVFHDAAALDTTVDMLDPQPTLV
Ga0209590_100849831	3300027882	Vadose Zone Soil	MQGTAEFHHEIADAVLPQPDPVFDDAAALDATVDML
Ga0209590_104153252	3300027882	Vadose Zone Soil	MQRTADFHHEIADALLPQTDPVFDDATTLHTAVHMLDP
Ga0209590_106521461	3300027882	Vadose Zone Soil	MQGTAQFHHEITDALLPEPDPVFHNATTLHATVDMLD
Ga0209590_107318472	3300027882	Vadose Zone Soil	VQGTTEFHHQIADALLPEAKAVFDDATALDTTINMLDAQPSVVQRL
Ga0209590_108206372	3300027882	Vadose Zone Soil	MQGTTDFHHQITDARLPQADPVFHDATALHTTVDMLD
Ga0207428_107543032	3300027907	Populus Rhizosphere	MLGTADFHHEIAAAVLPQPHPVFDDPTALDAAVDMLDSAADAD
Ga0247820_109638981	3300028597	Soil	MQRTADFHYDITDTLLPQADAVFDDATALDTAVDMLDPQSARVERLVGSLLRR
Ga0311371_109568803	3300029951	Palsa	MKSTAEFHHQIADALPPQADTVFDDPTTFDTTVDMFDPQPAVMQRPD
Ga0308203_10378331	3300030829	Soil	MQGTTEFHHEIADAVLPQPDPVFDDTAALDAAVDMLDP
Ga0308198_10907381	3300030904	Soil	MQGTAEFHHQITDALFPQAHPVFDDATALDTAVDVLDA
Ga0308197_103475052	3300031093	Soil	MQGTTKFHHEIADAVLPQPDPVFHDAAALDAAVHMLDP
Ga0308199_10006554	3300031094	Soil	MQGTAEFHHQITDALFPQAHPVFDDATALDTAVDVLD
Ga0308187_100390831	3300031114	Soil	MQGTADFHHEIADTFLPQTDPIFNDATALDTTVGMLDPKPMLVQRLV
Ga0308182_10027253	3300031125	Soil	MELTAEFHHEIADALLPQANPVFDDAAALDTTVDMLDPQ
Ga0318560_103233793	3300031682	Soil	QRVMQGTAEFHHEIADPLLPQADTVFDDAAALDVE
Ga0307413_106329511	3300031824	Rhizosphere	MQGTADFHHDITDTLLPQADPVFDDATTLDAAVDMLDPQSAGMERLVGSLLRQW
Ga0307410_108336842	3300031852	Rhizosphere	MQGTADFHHDIADALLPQADPVLDDATALDTAVDMLDPQPAG
Ga0306919_106847852	3300031879	Soil	MQGTAELHREIADALLPQADPVFHHATTEDVSEVL
Ga0307406_109180273	3300031901	Rhizosphere	HHAITDALLPQADPVFDDATALDTAVDRLDPQSAGVERLVGSLLRP
Ga0307406_113950981	3300031901	Rhizosphere	MQGTAEFHHQIADARLPQADPVFHNAAALDTAVDML
Ga0307409_1029165932	3300031995	Rhizosphere	MQGTADFHHDIPDALLPQADPVLDDATALDTAVDMLDPQSARVER
Ga0307416_1005917731	3300032002	Rhizosphere	MQGTAEFHHQIADARHPQAEPVCDDTTALATPVDRLDPQPAVREGLI
Ga0307414_120127281	3300032004	Rhizosphere	MQGTADFHHDITDTLLPQVDPVFDDATALDAAVDVLDPQSAGVERLGGSLL
Ga0307411_121083741	3300032005	Rhizosphere	MQGTADFHYDIPDALLPQADPVFDDATALDTAVDRLD
Ga0310906_100529021	3300032013	Soil	MQGAAEFHHQIADALFPQADAVFDNATALDTAGDMRDPQPAAEQFY
Ga0326721_101878831	3300032080	Soil	MQGTADFHHAITDAPLPQADPVFDDATALDAAVDMLDPQSAGVERLVGS
Ga0326721_107465401	3300032080	Soil	MQGTADFHHDIPDALLPQADPVLDDAATLDTAVDMLDP
Ga0307471_1007537763	3300032180	Hardwood Forest Soil	MEGTAEFHYQIADALLPQANPVFHDATTLDTAVDVLDP
Ga0307472_1013467772	3300032205	Hardwood Forest Soil	HPEVVQGTTEFHHEITDAVLPQSDPVFDDTTALHAAIDMLDA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters