NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F030515

Metagenome / Metatranscriptome Family F030515

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F030515
Family Type Metagenome / Metatranscriptome
Number of Sequences 185
Average Sequence Length 62 residues
Representative Sequence MSADTHKHLAMLRILYGACAAALDAFRAADNPVDEELVADLEAMVERTKEEIERLSAHLANPS
Number of Associated Samples 132
Number of Associated Scaffolds 185

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 36.87 %
% of genes near scaffold ends (potentially truncated) 24.32 %
% of genes from short scaffolds (< 2000 bps) 80.54 %
Associated GOLD sequencing projects 119
AlphaFold2 3D model prediction Yes
3D model pTM-score0.76

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (57.297 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere
(7.568 % of family members)
Environment Ontology (ENVO) Unclassified
(30.270 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(47.027 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.
1deeps_01901540
2deeps_03272150
3INPhiseqgaiiFebDRAFT_1056908922
4F24TB_180462671
5AP72_2010_repI_A10DRAFT_10539101
6JGI11615J12901_100150733
7JGI11615J12901_101579393
8JGI10216J12902_1165474842
9soilH1_102023181
10soilH2_100921824
11soilH2_101526692
12Ga0062593_1016182961
13Ga0062593_1028553172
14Ga0062590_1008079992
15Ga0062590_1015665572
16Ga0063356_1018687692
17Ga0062595_1000387353
18Ga0062595_1000763414
19Ga0062595_1001338692
20Ga0062595_1012283081
21Ga0062591_1001911433
22Ga0062591_1007658392
23Ga0062591_1008555711
24Ga0062591_1010248711
25Ga0062591_1015972721
26Ga0070658_101697281
27Ga0070683_1000324966
28Ga0070683_1000364876
29Ga0070690_1006921622
30Ga0070680_1004905853
31Ga0070682_1002954221
32Ga0070660_1000960101
33Ga0070661_1000221653
34Ga0070661_1008153891
35Ga0070661_1017584672
36Ga0070692_105630542
37Ga0070673_1002718734
38Ga0070673_1009051052
39Ga0070714_1000853852
40Ga0070714_1002898172
41Ga0070714_1008053772
42Ga0070714_1014970351
43Ga0070714_1016202912
44Ga0070714_1016548272
45Ga0070713_1005127883
46Ga0070710_114632152
47Ga0070711_1014213701
48Ga0070711_1020700722
49Ga0070662_1003209592
50Ga0070741_101772683
51Ga0070741_102780021
52Ga0070741_110799821
53Ga0070741_115930381
54Ga0070739_100085108
55Ga0070739_100920734
56Ga0070684_1000534236
57Ga0070684_1001610163
58Ga0070730_107308732
59Ga0070731_101517372
60Ga0070732_105311692
61Ga0070686_1011697492
62Ga0070686_1014733491
63Ga0070696_1003373041
64Ga0066670_104130972
65Ga0068855_1017301001
66Ga0066708_106834361
67Ga0068857_1002547053
68Ga0066654_100786812
69Ga0068856_1017894471
70Ga0070702_1007411822
71Ga0068864_1024293611
72Ga0066903_1018100743
73Ga0075284_10757521
74Ga0070717_100537623
75Ga0070717_118392642
76Ga0070717_119664862
77Ga0070712_1012584552
78Ga0097621_1017394451
79Ga0079222_101708773
80Ga0079222_107100831
81Ga0079222_109839152
82Ga0079222_122559052
83Ga0079221_111155592
84Ga0079221_114942992
85Ga0079221_115670682
86Ga0079220_101649114
87Ga0079220_109718881
88Ga0079220_116966632
89Ga0075434_1008883082
90Ga0073928_106866032
91Ga0074063_129383252
92Ga0105240_104173782
93Ga0105245_100451832
94Ga0105242_111138311
95Ga0105248_106074791
96Ga0105248_108063582
97Ga0105237_109156773
98Ga0105238_114576492
99Ga0126309_104928932
100Ga0126318_101457351
101Ga0126318_110395462
102Ga0126379_129113901
103Ga0134128_1000474014
104Ga0134128_100631773
105Ga0134128_105723014
106Ga0105239_102609752
107Ga0134126_118258682
108Ga0134127_103643084
109Ga0134121_109560532
110Ga0105246_109613612
111Ga0157303_100346062
112Ga0164300_101160072
113Ga0164298_114735832
114Ga0164299_101894103
115Ga0164299_115939621
116Ga0164301_107660321
117Ga0164308_102326302
118Ga0164304_110185322
119Ga0157369_119743711
120Ga0157374_101367376
121Ga0163162_101312746
122Ga0182008_101885663
123Ga0182008_107515732
124Ga0157377_117679011
125Ga0157376_116269372
126Ga0157376_130622891
127Ga0167652_100035313
128Ga0182007_103740811
129Ga0132258_105855185
130Ga0190268_103791222
131Ga0173482_100356443
132Ga0197907_113162781
133Ga0206356_110163712
134Ga0206355_12320662
135Ga0206350_100767262
136Ga0206350_108804882
137Ga0206353_118748452
138Ga0182009_102106691
139Ga0182009_105390141
140Ga0224712_100066445
141Ga0224712_102539642
142Ga0212123_105902111
143Ga0247794_101886691
144Ga0247693_10353233
145Ga0247672_10123073
146Ga0247664_10760102
147Ga0247677_10187851
148Ga0247676_10855682
149Ga0247661_10420721
150Ga0247681_10765792
151Ga0247668_11006272
152Ga0207707_103421773
153Ga0207695_104961883
154Ga0207693_114742561
155Ga0207694_111944652
156Ga0207687_100741525
157Ga0207700_104887902
158Ga0207664_105956402
159Ga0207711_101350481
160Ga0207677_109352931
161Ga0207678_110159192
162Ga0207708_104707612
163Ga0207702_107773571
164Ga0207674_102934602
165Ga0209810_10066657
166Ga0209580_106641342
167Ga0209579_102836343
168Ga0265326_100600272
169Ga0307317_103362702
170Ga0265338_1000236430
171Ga0265338_100538526
172Ga0307305_101440102
173Ga0307277_101389572
174Ga0268241_100013122
175Ga0268241_100729011
176Ga0308175_1001063025
177Ga0308175_1001669632
178Ga0308175_1009573852
179Ga0308175_1023805501
180Ga0308174_102575441
181Ga0308176_108948881
182Ga0308176_115074312
183Ga0335085_1000564313
184Ga0335075_100430822
185Ga0310810_103375402
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 58.24%    β-sheet: 0.00%    Coil/Unstructured: 41.76%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

51015202530354045505560MSADTHKHLAMLRILYGACAAALDAFRAADNPVDEELVADLEAMVERTKEEIERLSAHLANPSSequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.76
Powered by PDBe Molstar

Structural matches with SCOPe domains



 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
57.3%42.7%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Soil
Iron-Sulfur Acid Spring
Soil
Soil
Terrestrial Soil
Tropical Forest Soil
Serpentine Soil
Glacier Forefield Soil
Surface Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Soil
Soil
Agricultural Soil
Sugarcane Root And Bulk Soil
Soil
Soil
Forest Soil
Soil
Soil
Rice Paddy Soil
Soil
Tropical Forest Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Agricultural Soil
Arabidopsis Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Arabidopsis Thaliana Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Populus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Corn Rhizosphere
Rhizosphere
Miscanthus Rhizosphere
Rhizosphere
Switchgrass Rhizosphere
Corn Rhizosphere
7.6%3.8%3.2%6.5%4.3%7.0%5.4%3.8%4.3%3.8%7.6%3.8%3.8%3.2%3.8%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
deeps_019015402199352024SoilMATDTHKHLAMLRILYGACAAALDAFRAADNPVDEHLVGDLETMVERTKSEIERLSAHLAKPS
deeps_032721502199352024SoilMAADTYKNLSMLRILYGACVAALDAFRAADNPVDEKLVVDLEAMVTRTLSEIERLSALLAKPS
INPhiseqgaiiFebDRAFT_10569089223300000364SoilLRILYGSCAAARDAFRGADTPVDEELVSDLEAMVERTKGEIERLSAHRANPE*
F24TB_1804626713300000550SoilQHLSMLRILYAASAAALDVFRAADNPVDERLVEDLEKMVDRTRQEIGRLAATVGEPS*
AP72_2010_repI_A10DRAFT_105391013300000651Forest SoilSMLHILYGACSAALTAFRAADNPIDEQLVLDLETMVVRTQGEIERLSARLAGDAA*
JGI11615J12901_1001507333300000953SoilVAVDTHPHLAMLRILYGACAAAHDAFRARDNPVDGKLVADLDAMLERTKGEIERLDADFAAPN*
JGI11615J12901_1015793933300000953SoilMEADTHRHLAMLRILYGSCMTALDAFRAADNPVDEELVLELESMVERTKSEIERLSAHLAKPF*
JGI10216J12902_11654748423300000956SoilVEAKSNEQQLAMLHILYGASTTALNAFRAADNPVDEQLVADLEAMVVRTRGEIDRLAALVAGDAA*
soilH1_1020231813300003321Sugarcane Root And Bulk SoilMPADTHQHLAMLRILYGACSAALDAFRAADNPVDSQLVADLETMMMRTHGEIERLTALLAEGATG*
soilH2_1009218243300003324Sugarcane Root And Bulk SoilMATDTHQHLAMLRILYGACAAALDAFRAADNPVDGQLVADLEAMVERTSGEIERLSAHLARPPE*
soilH2_1015266923300003324Sugarcane Root And Bulk SoilMASDTHQHLAMLRILYGACSAALDAFRAADNPVDAQLVADLETMMSRTRDEIERLTALLQEAS*
Ga0062593_10161829613300004114SoilMLRILYGSCAAARDAFRGADTPVDEELVSDLEAMVERTKGEIERLSAHRANPE*
Ga0062593_10285531723300004114SoilMETESRRHLSLLRILYGACATALEAFRAADNPVDEELVADLEKMVERTKLEIERLAARLANAS*
Ga0062590_10080799923300004157SoilMSADTHKHLAMLRILYGACAAALDAFRAADDPVDEELVADLEAMVERTKEEIERLSAHLANPSS*
Ga0062590_10156655723300004157SoilMDATTPQELGMLRILHGACSAALDAFRAADNPVDERLVADLETMVERTTGEIERLSARLAAEAAS*
Ga0063356_10186876923300004463Arabidopsis Thaliana RhizosphereMLRILYGACATALEAFRAADNPVDEELVADLEKMVERTQLEIERLAARLANAS*
Ga0062595_10003873533300004479SoilMLRILYGACAAALDAFHAADNPVDEQLVADLEDMVERTQGEIERLAALLARPSG*
Ga0062595_10007634143300004479SoilMTADTPQHLAMLRILYGACAAALDAFRAADNPVDAQLVADLEVMMARTHDEIERLTTLLARTP*
Ga0062595_10013386923300004479SoilMLRILYGACAAALDAFRAADNPVDEQLVIDLETMVTRTQAEIERLTLRFANPS*
Ga0062595_10122830813300004479SoilMAADANKHLSMLRILYGACAAALDAFRAADNPVDEQLVVDLETMATRTRSEIERLSALLANPS*
Ga0062591_10019114333300004643SoilMLRILYGACSAALDAFRAADNPVDDQLVADLETMVERTRAEIERLAAHLAKAPQDPRLTS
Ga0062591_10076583923300004643SoilMATGTHQHLAMLRILYGACAAALDAFRAADNPADEELVADLEAMIERTKDEIERLSAHLA
Ga0062591_10085557113300004643SoilNRWGGHSAFMEADTHRHLAMLRILYGSCMTALDAFRAADNPVDEELVLELESMVERTKSEIERLSAHLAKPF*
Ga0062591_10102487113300004643SoilVDTHPHLAMLRILYGACAAAHDAFRARDNPVDGKLVADLDAMLERTKGEIERLDADFAAPN*
Ga0062591_10159727213300004643SoilMSADTHKHLAMLRILYGACAAALDAFRAADNPVDEELVADLEAMVERTKEEIERLSAHLANPS
Ga0070658_1016972813300005327Corn RhizosphereMAADTPQHLAMLRILYGACSAALDAFRAADNPVDRQLVADLESMMDRTEDEIGRLTSLLQGGALAP*
Ga0070683_10003249663300005329Corn RhizosphereMAADTPQHLAMLRILYGACSAALDAFRAADNPVDRQLVADLESMMDRTEDEIGRLTLLLQGGALAP*
Ga0070683_10003648763300005329Corn RhizosphereMSVDTHKHLAMLRILYGACAAALDAFRAADNPVDEELVADLEAMVERTKEEIERLSAHLANPSS*
Ga0070690_10069216223300005330Switchgrass RhizosphereMLRILYGSCAAARDAFRGADTPVDEELVSDLEAMVERTKGEIERLSVHRANPE*
Ga0070680_10049058533300005336Corn RhizosphereMSADTHKHLAMLRILYGACAAALDAFRAADNPVDEELVADLEAMVERTKDEIERLSAHLANPSS*
Ga0070682_10029542213300005337Corn RhizosphereCPPRPSLRRLMAADTPQHLAMLRILYGACSAALDAFRAADNPVDRQLVADLESMMDRTEDEIGRLTSLLQGGALAP*
Ga0070660_10009601013300005339Corn RhizosphereMSADTHKHLAMLRILYGACAAALDSFRAADNPVDEELVADLEAMVERTKDEIERLSAHLANPSS*
Ga0070661_10002216533300005344Corn RhizosphereMSADTHKHLAMLRILYGACAAALDAFRAADNPVDEELVADLEAMVERTKEEIERLSAHLANPSS*
Ga0070661_10081538913300005344Corn RhizosphereMAADTPQHLAMLRILYGACSAALDAFRAADNPVDRQLVADLESMMDRTEDEIGRLTSLLQGGA
Ga0070661_10175846723300005344Corn RhizosphereMDATTPQELAMLRILYGACPAALDAFRAADNPVDEQLVADLERMVERTRGEIE
Ga0070692_1056305423300005345Corn, Switchgrass And Miscanthus RhizosphereMAADTPQHLAMLRILYGACSAALDAFRAADNPVDRQLVADLESMMDRTEDEIGRVTSLLQGGALAP*
Ga0070673_10027187343300005364Switchgrass RhizosphereMDATTPQELAMLRILYGACPAALDAFRAADNPVDEQLVADLERMVERTRGEIERLSARLAAEAAS*
Ga0070673_10090510523300005364Switchgrass RhizosphereMDPDGHQHLSMPRILYGASAAALDAFRAADNPVDRELVGDLERMVERTRGEIDRLAARHATPS*
Ga0070714_10008538523300005435Agricultural SoilMLHILYGACSAALNAFRAADNPIDEQLVRDLETMVTRTQGEIEKLAARLASDAT*
Ga0070714_10028981723300005435Agricultural SoilMGSPEPDAQQQLAMLRILYGACATALDAFRAANNAVDAQLVLDLEAMVERTQGEIERLAARAAQAS*
Ga0070714_10080537723300005435Agricultural SoilMPADTHKHLAMLRILYGACAAALDAFRAADNPVDEQLVVDLETMVERTKDEIERLSAKLANPA*
Ga0070714_10149703513300005435Agricultural SoilMPTDSHKHLAMLRILYGACAAALEAFRAADNPVDELLVGDLATMVERTKDEIARLSATLASP*
Ga0070714_10162029123300005435Agricultural SoilMSAHNHKQLAMLRILYGACATALDAFQAADNPVDEQLVLDLETMVERTKGEIERLSARLANPA*
Ga0070714_10165482723300005435Agricultural SoilARFDSDARREMVEMGSPAPDAAQHLAMLRILYGACATALDAFRAANNAVDARLVLDLEAMVERTRGEIDRLSAHLAQPS*
Ga0070713_10051278833300005436Corn, Switchgrass And Miscanthus RhizosphereMLRILYGACTAALDAFHAADNPVDEELVADLETMVERTKGEIERLATRDAAPPG*
Ga0070710_1146321523300005437Corn, Switchgrass And Miscanthus RhizosphereDPPHGTRGLMAADSHQHLAMLRILYGACAAALDAFRAADNPVDTQLVADLEAMMTRTHGEIERLTALLAQRA*
Ga0070711_10142137013300005439Corn, Switchgrass And Miscanthus RhizosphereMAADTHQHLAMLRILYGACAAALDAFRAADNPVDTQLVADLETMMTRTHGEIDRLTVLLADDS*
Ga0070711_10207007223300005439Corn, Switchgrass And Miscanthus RhizosphereMLRILYGACTAALDAFHAAGNPVDEELVADLETMVERTKGEIERLATRDAAPPG*
Ga0070662_10032095923300005457Corn RhizosphereMSVDTHKHLAMLRILYGACAAALDAFRAADDPVDEELVADLEAMVERTKEEIERLSAHLANPSS*
Ga0070741_1017726833300005529Surface SoilMSRPAPDLSQQLAMLRILYGACAAALDAFQAADNALDEQLVRDLQAMVERTHGEIERLTATIANSRPD*
Ga0070741_1027800213300005529Surface SoilMLYILYGACSAALDAFRAADNPIDKQLLVDLETMVTRTRGEIERLAASLAAPS*
Ga0070741_1107998213300005529Surface SoilQRDDPKPETLKHLAMLRILYGACSTALDAFRAADNPVDDELVADLETMVGRTQGEIERLSALLAQP*
Ga0070741_1159303813300005529Surface SoilMSADTHKHLAMLRILYGASAAALDAFRAADNPVDEQLVVDLETMVERTKGEIERLSAALASPS*
Ga0070739_1000851083300005532Surface SoilMASDPRQQLAMLRILYGACSAALDAFRAADNPVDEQLVADLESMVERTQGEIERLAANLAKAP*
Ga0070739_1009207343300005532Surface SoilMQRDDPKPETLKHLAMLRILYGACSTALDAFRAADNPVDDELVADLETMVGRTQGEIERLSALLAQP*
Ga0070684_10005342363300005535Corn RhizosphereMSADTHKHLAMLRILYGACGAALDAFRAADNPVDEELVADLEAMVERTKDEIERLSAHLANPSS*
Ga0070684_10016101633300005535Corn RhizosphereMLRILYGACPAALDAFRAADNPVDEQLVADLERMVERTRGEIERLSARLAAEAAS*
Ga0070730_1073087323300005537Surface SoilMSPEREQLAMLRILYGACVTALDAFRAADNPVDQQLVADLETMVERTKGEIERLTAQLARTAPAT*
Ga0070731_1015173723300005538Surface SoilMLHILYGACSAALNAFRAANNPVDEQLVRDLETMIVRTQSEIDRLVAQLASGAA*
Ga0070732_1053116923300005542Surface SoilMGRPEPDVQQELAMLRILYGTSAAALDAFRAADNALDAQLMADLESMVQRTQVEIERLTAQVARAT*
Ga0070686_10116974923300005544Switchgrass RhizosphereMDATTPQELAMLRILYGACSAALDAFRAADNPVDEHLVADLERMVERTRGEIERLSARLAAEAAS*
Ga0070686_10147334913300005544Switchgrass RhizosphereMSADTHKHLAMLRILYGACAAALDAFRAADDPVDEELVADLEAMVERTKDEIERLSAH
Ga0070696_10033730413300005546Corn, Switchgrass And Miscanthus RhizosphereLRRLMAADTPQHLAMLRILYGACSAALDAFRAADNPVDRQLVADLESMMDRTEDEIGRLTSLLQGGALAP*
Ga0066670_1041309723300005560SoilMLRILYGACATALDAFRAADDPIDEQLVADLEVMVERTQGEIERLTGRLANPS*
Ga0068855_10173010013300005563Corn RhizosphereMLRILYGSCAAARDAFRGADTPVDEELVSDLEAMVERTKGEIERLSAHRA
Ga0066708_1068343613300005576SoilMLRILYGACATALDAFRAADDPIDEQLVADLEVMVERTQGEIERLTARLAHPS*
Ga0068857_10025470533300005577Corn RhizosphereMSADTHKHLAMLRILYGACGAALDAFRAADNPVDEELVADLEAMVERTKEEIERLSAHLANPSS*
Ga0066654_1007868123300005587SoilVEAKSREQQLAMLHILYGACSSALNAFRAADNPVDEELVRDLEAMVVRTQGEIDRLAALLAGDAA*
Ga0068856_10178944713300005614Corn RhizosphereMRWGSWCSVEARSSEQQLAMLHILYGACSAALTAFQAADNPIDEQLVLDLEAMIVRTRGEIERLAALVAGDAA*
Ga0070702_10074118223300005615Corn, Switchgrass And Miscanthus RhizosphereMSADTHKHLAMLRILYGACAAALDAFRAADDPVDEELVADLEAMVERTKDEIERLSAHLANPSS*
Ga0068864_10242936113300005618Switchgrass RhizosphereMLRILYGSCAAARDAFRGADTPVDEELVSDLEAMVERTKGEIERLSVHRAN
Ga0066903_10181007433300005764Tropical Forest SoilVESKSGDQQLAMLHILYGACSAALNAFRAADNPVDEELVRDLEMMVTRTQGEIEKLAAHLARVAA*
Ga0075284_107575213300005885Rice Paddy SoilATTAKELAMLRILYGACATALDAFRAADNPVDDQLVADLETMVERTKDEIERLSAHLANRPSD*
Ga0070717_1005376233300006028Corn, Switchgrass And Miscanthus RhizosphereMLHILYGACSAALNAFRAANNPVDEELVLELDRMIVRTQGEIERLVAELASEAS*
Ga0070717_1183926423300006028Corn, Switchgrass And Miscanthus RhizosphereACSAALNAFRAADNPIDDQLVSDLEAMVARTQNEIERLSAEVASGNA*
Ga0070717_1196648623300006028Corn, Switchgrass And Miscanthus RhizosphereTSRHLAMLRILYGACSAALEAFHAADNPVDESLVADLETMVERTKGEIDRLAAQLDGRPR
Ga0070712_10125845523300006175Corn, Switchgrass And Miscanthus RhizosphereMAADSHQHLAMLRILYGACAAALDAFRAADNPVDTQLVADLEAMMTRTHGEIERLTALLAQRA*
Ga0097621_10173944513300006237Miscanthus RhizosphereMLRILYGSCAAARDAFRGADTPVDEELVSDLEAMVERTKGEIERLSAHRANP
Ga0079222_1017087733300006755Agricultural SoilMRWGSWCSVEARSNEQQLAMLHILYGACSAALTAFQAADNPIDEQLVLDLEAMIVRTRGEIERLAALVAGDAA*
Ga0079222_1071008313300006755Agricultural SoilMAADNRQHLAMLRILYGACLAALDAFRAADNPVDSQLVADLESMMHRTKDEI
Ga0079222_1098391523300006755Agricultural SoilRILYGACSAALDAFRAADNPVDGQLVVDLETMVERTKDEIERLSALLAKPSS*
Ga0079222_1225590523300006755Agricultural SoilHLAMLRILYGACSAALDAFRAADNPVDQQLAADLESMVERTRAEIERLTAHLARAPESA*
Ga0079221_1111555923300006804Agricultural SoilVLRILYGACAAALDAFHAADNPVDEQLVVDLEHRSSERRVKIERLAAQLAKPLARARSR
Ga0079221_1149429923300006804Agricultural SoilMPADTHKQLAMLRILYGACGAALDAFRAADNPVDEQLVRDLETMVERTKGEIERLSASLAAPS*
Ga0079221_1156706823300006804Agricultural SoilMAADNRQHLAMLRILYGACLAALDAFRAADNPVDSQLVADLESMMHRTKDEIGRLTALLESTA*
Ga0079220_1016491143300006806Agricultural SoilMSADTPQHLAMLRILYGACSAALDAFRAADNPVDSRLVADLETMMTRTQGEIERLTALLRETG*
Ga0079220_1097188813300006806Agricultural SoilDARQHLAMLRILYGACATALDAFRAANNAVDAQLVLDLEAMVERTQGEIERLAASIAQTT
Ga0079220_1169666323300006806Agricultural SoilVETKSSEQQLAMLHILYGACSAALNAFRAADNPIDEQLVRDLETMVTRTQGEIERLATHLASHAE*
Ga0075434_10088830823300006871Populus RhizosphereMGHPRGMEANGHQHLSMLRILYGASAAALDAFRAADGPVDRELVGDLERMVARTRAEIDRLAARHAIPS*
Ga0073928_1068660323300006893Iron-Sulfur Acid SpringMAQDTQTLAMLRILYGACSTALDAFRAADNRIDDQLVADLETMVERTAGEIERLTAVLADAP*
Ga0074063_1293832523300006953SoilMPPEATPSTHQQLAMLRILYGSCVTALEAFRAADNPLDERLVTDLEAMVERTVGEIERLTAHLARPRP*
Ga0105240_1041737823300009093Corn RhizosphereMSVDTHKHLAMLRILYGACAAALDAFRAADNPVDEELVADLEAMVERTKDEIERLSAHLANPSS*
Ga0105245_1004518323300009098Miscanthus RhizosphereMSADTHKHLAMLRILYGACAAALDAFRAADDPVDEELVADLEAMVERTKDEIERLSAYLANPSS*
Ga0105242_1111383113300009176Miscanthus RhizosphereMLRILYGSCAAARDAFRGADTPVDEELGSDLEAMVERTKGEIERLSAHRANPE*
Ga0105248_1060747913300009177Switchgrass RhizosphereMATHTHQHLSMLRILYGSCATALEAFRAADNPVDDQLVADLETMVERAKGEIERLTAHLAKPA*
Ga0105248_1080635823300009177Switchgrass RhizosphereMLRILYGSCAAARDAFRGADTPVDEELVSDLEAMVERTKGEIERLSAHRAHPE*
Ga0105237_1091567733300009545Corn RhizosphereMSADTHKHLAMLRILYGACAAALDAFRAADDPVDEELVADLEAMVERTKEEIERLS
Ga0105238_1145764923300009551Corn RhizosphereMLRILYGACATAIEAFRAADNPVDDQLVSDLETMLERTKGEIERLTAHLAKSGS*
Ga0126309_1049289323300010039Serpentine SoilMLRILYGACAAALDAFHAADNPVDEQLVADLETMVERTRGELERLSVQTVGA*
Ga0126318_1014573513300010152SoilLAMLRILYGACATALDAFRAADNPVDEQLVADLETMVERTKGEIERLSAYLAKPPGS*
Ga0126318_1103954623300010152SoilSRQLAMLRILYGACAAALDAFHAADNPVDEQLVADLEDMVERTQGEIERLAALLARPSG*
Ga0126379_1291139013300010366Tropical Forest SoilVESKSGDQQLAMLHILYGACSAALNAVRAADNPVDEELVRDLEMMVTRTQGEIEKLAAHLARVAA*
Ga0134128_10004740143300010373Terrestrial SoilMLRILYGACLAALDAFRAADNPIDDQLVTDLETMVERTKHEIERLSAQLAQPS*
Ga0134128_1006317733300010373Terrestrial SoilMLRILYGACSAALDAFRAADNPVDEELVADLEVMVERTKDEIERLSTHLAKPSE*
Ga0134128_1057230143300010373Terrestrial SoilMLRILYGSCAAARDAFRGADTPVDEELVSDLEAMVERTKGEIERLSAHSANPE*
Ga0105239_1026097523300010375Corn RhizosphereMLRILYGSCAAARDAFRGADTPVDEELVSDLEAMVERTKGEIERLSVHRANNE*
Ga0134126_1182586823300010396Terrestrial SoilMTTPDTPQHLAMLRILYGACLAALDAFRAADNPIDDQLVTDLETMVERTKHEIERLSAQLAQPS*
Ga0134127_1036430843300010399Terrestrial SoilMDPDVQRHLSMLRILYGASAAALDAFRAADNPVDQELVGDLERMVERTGAEIDRQAARLATPP*
Ga0134121_1095605323300010401Terrestrial SoilMATDTHQHLAMLRILYGACFTALEAFRAADNPVDDQLVVDLESMVERTKGEIGRLTSHLTKTES*
Ga0105246_1096136123300011119Miscanthus RhizosphereMATHTHQHLSMLRILYGSCATALEAFRAADNPVDDQLVADLETMVERTKGEIERLTAHLAKSAS*
Ga0157303_1003460623300012896SoilMAADANTHLSMLRILYGACAAALDAFRAADNPVDEQLVVDLETMATRTRSEIERLSALLANPS*
Ga0164300_1011600723300012951SoilMDPDGQRNLSMLRILYGASAAALDAFRAADNPVDHELVGDLERMVERTRVEIDRLARHATPS*
Ga0164298_1147358323300012955SoilMLRILYGACSATLDAFRAADNPVDEQLVIDLETMVERTKGEIERLSGGLATPS*
Ga0164299_1018941033300012958SoilMPADSSPQHLAMLRILYGACSAALDAFRAADNPVDAQLVNDLEAMMVRTKDEIERLTARLREAP*
Ga0164299_1159396213300012958SoilMATDTHRHLAMLRILYGSCVTALEAFRAAGNPVDDQLVADLETMVERTKGEIERLTAHLAKPQT*
Ga0164301_1076603213300012960SoilMPAESSPQHLAMLRILYGACSAALDAFRAADNPVDAQLVNDLEAMMVRTKDEIERLTARLREAP*
Ga0164308_1023263023300012985SoilMDPDGQRNLSMLRILYGASAAALDAFRAADNPVDHELVGDLERMVERTRAEIDRLARHATPS*
Ga0164304_1101853223300012986SoilMPADSSPQHLAMLRILYGACSAALDAFRAADNPVDAQLVNDLEAMMVRTKDEIARLTARLREAP*
Ga0157369_1197437113300013105Corn RhizosphereRRLMAADNRQHLAMLRILYGACLAALDAFRAADNPVDSQLVADLESMMHRTKDEIGRLTALLESTA*
Ga0157374_1013673763300013296Miscanthus RhizosphereSTGTQRPMSADTHKHLAMLRILYGACAAALDAFRAADNPVDEELVADLEAMVERTKEEIERLSAHLANPSS*
Ga0163162_1013127463300013306Switchgrass RhizosphereDRGHARCIEASSHQHVAMLRILYGSCAAARDAFRGADTPVDEELVSDLEAMVERTKGEIERLSVHRANPE*
Ga0182008_1018856633300014497RhizosphereMATENHQHLAMLRILYGACSAALDAFRAADNPVDATLVTDLETMVERTKDEIERLTAHLAGPA*
Ga0182008_1075157323300014497RhizosphereMATGTHQHLAMLRILYGACAAALDAFRAADNPADEELVADLEAMIERTKDEIERL
Ga0157377_1176790113300014745Miscanthus RhizosphereTGTQGPMSADTHKHLAMLRILYGACAAALDAFRAADDPVDEELVADLEAMVERTKEEIERLSAHLANPSS*
Ga0157376_1162693723300014969Miscanthus RhizosphereMATHTHQHLSMLRILYGSCATALEAFRAADNPVDDQLVADLETMVERTKGEIERLTAHLAKPTP*
Ga0157376_1306228913300014969Miscanthus RhizosphereMSADTHKHLAMLRILYGACAAALDAFRAADDPVDEELVADLEAMVERTKEEIERLIAHLANPSS*
Ga0167652_1000353133300015164Glacier Forefield SoilMTPDITPQTPQTPKHLAMLRILYGACSAALDAFRAADNPVDQQLVADLESMVTRTYLEIERLTAQLAKSA*
Ga0182007_1037408113300015262RhizosphereMAADTHQHLAMLRILYGACSAALDAFRAADNPVDRQLVADLESVMDRTEDEIGRLTSLLQGGA
Ga0132258_1058551853300015371Arabidopsis RhizosphereMLRILYGSCAAARDAFRGADTPVDEELVSDLEAMVERTKGEIERLSAHPANPE*
Ga0190268_1037912223300018466SoilMAEDTHQHLSMLRILYAASATALDTFRAADNPVDVELLADLEKMVERTRLEIERLAALLADPS
Ga0173482_1003564433300019361SoilMAADANTHLSMLRILYGACAAALDAFRAADNPVDEQLVVDLETMATRTRSEIERLSALLANPS
Ga0197907_1131627813300020069Corn, Switchgrass And Miscanthus RhizosphereTQRPMSADTHKHLAMLRILYGACAAALDAFRAADNPVDEELVADLEAMVERTKEEIERLSAHLANPSS
Ga0206356_1101637123300020070Corn, Switchgrass And Miscanthus RhizosphereMSADTHKHLAMLRILYGACAAALDAFRAADDPVDEELVADLEAMVERTKEEIERLSAHLANPSS
Ga0206355_123206623300020076Corn, Switchgrass And Miscanthus RhizosphereMAADTPQHLAMLRILYGACSAALDAFRAADNPVDRQLVADLESMMDRTEDEIGRLTLLLQGGALAP
Ga0206350_1007672623300020080Corn, Switchgrass And Miscanthus RhizosphereMTTPDTPQHLAMLRILYGACLAALDAFRAADNPIDDQLVTDLETMVERTKHEIERLSAQLAQPS
Ga0206350_1088048823300020080Corn, Switchgrass And Miscanthus RhizosphereMAADTPQHLAMLRILYGACSAALDAFRAADNPVDRQLVADLESVMDRTEDEIGRLTSLLQGGALAP
Ga0206353_1187484523300020082Corn, Switchgrass And Miscanthus RhizosphereMSVDTHKHLAMLRILYGACAAALDAFRAADDPVDEKLVADLEAMVERTKEEIERLSAHLANPSS
Ga0182009_1021066913300021445SoilMSADTHKHLAMLRILYGACGAALDAFRAADNPVDEELVADLEAMVERTKEEIERLSAYIA
Ga0182009_1053901413300021445SoilMATGTHQHLAMLRILYGACAAALDAFRAADNPVDEELVADLEAMIERTKDEIERLSAHLA
Ga0224712_1000664453300022467Corn, Switchgrass And Miscanthus RhizosphereMAADTPQHLAMLRILYGACSAALDAFRAADNPVDRQLVADLESMMDRTEDEIGRLTSLLQGGALAP
Ga0224712_1025396423300022467Corn, Switchgrass And Miscanthus RhizosphereMAADNRQHLAMLRILYGACLAALDAFRAADNPVDSQLVADLESMMHRTKDEIGRLTALLESTA
Ga0212123_1059021113300022557Iron-Sulfur Acid SpringMAQDTQTLAMLRILYGACSTALDAFRAADNRIDDQLVADLETMVERTAGEIERLTAVLADAP
Ga0247794_1018866913300024055SoilVAVDTHPHLAMLRILYGACAAAHDAFRARDNPVDGKLVADLDAMLERTKGEIERLDADFAAPN
Ga0247693_103532333300024181SoilMTADTPQHLAMLRILYGACAAALDAFRAADNPVDAELVADLETMMTRTHDEIERLTALLRETG
Ga0247672_101230733300024187SoilMSVDTHKHLAMLRILYGACAAALDAFRAADNPVDEELVADLEAMVERTKEEIERLSAHLANPSS
Ga0247664_107601023300024232SoilHLAMLRILYGACGAALDAFRAADNPVDEELVADLEAMVERTKEEIERLSAHLANPSS
Ga0247677_101878513300024245SoilMAADDTYQHLSMLRILYGACTAALDAFRAADNPVDEQLVVDLEAMVTRTQSEIERLSALLANAEGAERILRRAHDAH
Ga0247676_108556823300024249SoilMAADDTYQHLSMLRILYGACTAALDAFRAADNPVDEQLVVDLEAMVTRTQSEIERLSALLANAEGAERILRRAHDA
Ga0247661_104207213300024254SoilMLRILYGACSAALDAFRAADNPVDRQLVADLESMMDRTEDEIGRLTSLLQGGALAP
Ga0247681_107657923300024310SoilMDPDGHQHLSMPRILYGASAAALDAFRAADNPVDRELMGDLERMVERTRGEIDRLAARHATPS
Ga0247668_110062723300024331SoilMSPERQQLAMLRILYGACVTALDAFRAADNPVDEQLVADLETMVERTKGEIERLTAQLAKTAS
Ga0207707_1034217733300025912Corn RhizosphereMSADTHKHLAMLRILYGACAAALDAFRAADNPVDEELVADLEAMVERTKEEIERLSAHLANPSS
Ga0207695_1049618833300025913Corn RhizosphereMSADTHKHLAMLRILYGACAAALDAFRAADNPVDEELVADLEAMVERTKDEIERLSAHLANPSS
Ga0207693_1147425613300025915Corn, Switchgrass And Miscanthus RhizosphereVLAASPDPPHGTRGLMAADSHQHLAMLRILYGACAAALDAFRAADNPVDTQLVADLEAMMTRTHGEIERLTALLAQRA
Ga0207694_1119446523300025924Corn RhizosphereMSTEATPNAHQHLAMLRILYGACATAIEAFRAADNPVDDQLVSDLETMLERTKGEIERLTAHLAKSGS
Ga0207687_1007415253300025927Miscanthus RhizosphereMLRILYGSCAAARDAFRGADTPVDEELVSDLEAMVERTKGEIERLSAHRANPE
Ga0207700_1048879023300025928Corn, Switchgrass And Miscanthus RhizosphereVEVKSTDQQLAMLHILYGACSAALNAFRAADNPIDEQLVRDLETMVTRTQGEIEKLAARLASDAT
Ga0207664_1059564023300025929Agricultural SoilMPTDSHKHLAMLRILYGACAAALEAFRAADNPVDELLVGDLATMVERTKDEIARLSATLASP
Ga0207711_1013504813300025941Switchgrass RhizosphereMDATTPQELAMLRILYGACSAALDAFRAADNPVDEHLVADLERMVERTRGEIERLSARLAAQAAS
Ga0207677_1093529313300026023Miscanthus RhizosphereMLRILYGSCAAARDAFRGADTPVDEELVSDLEAMVERTKGEIERLSVHRANPE
Ga0207678_1101591923300026067Corn RhizosphereMDATTPQELAMLRILYGACSAALDAFRAADNPVDEQLVADLERMVERTRGEIERLSARLAAEAAS
Ga0207708_1047076123300026075Corn, Switchgrass And Miscanthus RhizosphereMDATTPQELAMLRILYGACPAALDAFRAADNPVDEQLVADLERMVERTRGEIERLSARLAAEAAS
Ga0207702_1077735713300026078Corn RhizosphereMRWGSWCSVEARSSEQQLAMLHILYGACSAALTAFQAADNPIDEQLVLDLEAMIVRTRGEIERLAALVAGDAA
Ga0207674_1029346023300026116Corn RhizosphereMSVDTHKHLAMLRILYGACGAALDAFRAADNPVDEELVADLEAMVERTKEEIERLSAHLANPSS
Ga0209810_100666573300027773Surface SoilMASDPRQQLAMLRILYGACSAALDAFRAADNPVDEQLVADLESMVERTQGEIERLAANLAKAP
Ga0209580_1066413423300027842Surface SoilMGRPEPDVQQELAMLRILYGTSAAALDAFRAADNALDAQLMADLESMVQRTQVEIERLTAQVARAT
Ga0209579_1028363433300027869Surface SoilMNDESGQQHLAMLHILYGACSAALNAFRAANNPVDEQLVRDLETMIVRTQSEIDRLVAQLASGAA
Ga0265326_1006002723300028558RhizosphereMRPEPAHTPQHLAMLRILYGACSTALDAFRAADNPVDMQLVADLESMVSRTYLEIERLNAQLAKSA
Ga0307317_1033627023300028720SoilMEASTQQHLSMLKILYAACSTAVDAFRAADNPVDRELIADLEKMVERTHREIERLAADMNSS
Ga0265338_10002364303300028800RhizosphereMLRILYGACSTALDAFRAADNPVDMQLVADLESMVSRTYLEIERLNAQLAKSA
Ga0265338_1005385263300028800RhizosphereMTPKHAQTPQHLAMLRILYGACTAALDAFRAADNPVDTQLIADLESMVSRTYLEIERLTARLAKSA
Ga0307305_1014401023300028807SoilMGHPRGMEPDGHQHLSMLRILYGASSAALDAFRATDNLVDRELVGDLERMVARTRAEIDRLAARHATPS
Ga0307277_1013895723300028881SoilMGHPRGMEPDGHQDLSMLRILYGASSAALDAFRAADNPVDRELVGDLERMVVRTRAEIDRLAARHATPS
Ga0268241_1000131223300030511SoilMEATTPQELAMLRILYGACSAALDAFRAADNPIDEQLVADLETMVERTQGEIERLSARLAQPS
Ga0268241_1007290113300030511SoilVFIDGSTPQELAMLRILYGASAAALDAFRAADNPVDEQLVADLEAMVERTKGEIERLSAHLARPA
Ga0308175_10010630253300031938SoilMAGDTHKHLSMLRILYGACVAALDAFRAADNPVDEKLVVDLEAMVTRTRSEIERLSALLAKPS
Ga0308175_10016696323300031938SoilMASDTYQHLAMLRILYGACAAALDAFRAADNPVDERLVADLETMVVRTQAEIERLAARLT
Ga0308175_10095738523300031938SoilMLRILYGACSAALDAFRAADNPVDSQLVADLETMMMRTHDEIERLTALLGDGAAG
Ga0308175_10238055013300031938SoilMAADTHKHLAMLRILYGACATALDAFRTPDNPVDEKLVVDLETMVTRTYGEI
Ga0308174_1025754413300031939SoilPDTPQHLAMLRILYGACLAALDAFRAADNPIDDQLVTDLETMVERTKHEIERLSAQLAQPTSSADAVEST
Ga0308176_1089488813300031996SoilPPCPPRRSSRQAMATETHQHLAMLRILYGACSAALDAFRAADNPVDVKLVTDLEAMMTRTKDEIGRLTALLQQAP
Ga0308176_1150743123300031996SoilMAADTHKHLAMLRILYGACATALDAFRTPDNPVDEKLVVDLETMVTRTYGEIERLSARLAKDA
Ga0335085_10005643133300032770SoilMEAKSSEQQLAMLRILYAACSTALDTFRAADNPVDEQLVLDLGAMVARTRDEIERIAASLASGAL
Ga0335075_1004308223300032896SoilMAAPDPNLQQHLAILRILYGACAAALDAFRAANNALDAQLMADLEAVVERTQGEIERLTALVAGST
Ga0310810_1033754023300033412SoilMSADTHKHLAMLRILYGACGAALDAFRAADNPVDEELVADLEAMVERTKEEIERLSAHLANPSS


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.