NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F030486

Metagenome / Metatranscriptome Family F030486

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F030486
Family Type Metagenome / Metatranscriptome
Number of Sequences 185
Average Sequence Length 41 residues
Representative Sequence NVRRYVALAQSRGGARFCTRGAMQDYAVITLFSRWQKP
Number of Associated Samples 102
Number of Associated Scaffolds 185

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 7.73 %
% of genes near scaffold ends (potentially truncated) 81.08 %
% of genes from short scaffolds (< 2000 bps) 84.32 %
Associated GOLD sequencing projects 81
AlphaFold2 3D model prediction Yes
3D model pTM-score0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (72.432 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge
(47.027 % of family members)
Environment Ontology (ENVO) Unclassified
(71.892 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(63.784 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.
1Draft_1049064
2Draft_101301771
3Draft_101590932
4Draft_107599991
5Draft_100266521
6Draft_101096543
7Draft_101590501
8Draft_101619891
9CSTR_10190648
10JGI24708J26588_100623452
11JGI24712J26585_100531932
12MLSBCLC_100272203
13TOLCLC_100031331
14Ga0066604_101474931
15Ga0066601_101897491
16Ga0066599_1001635541
17Ga0074471_109848601
18Ga0079037_1001076642
19Ga0079102_10310943
20Ga0075525_100448831
21Ga0101727_1156151
22Ga0101756_1071864
23Ga0101935_10397111
24Ga0102489_1042155
25Ga0102492_1062721
26Ga0102492_1420242
27Ga0079303_101683043
28Ga0075524_101317591
29Ga0075524_102536721
30Ga0111484_10077773
31Ga0105099_109128841
32Ga0079224_1046013152
33Ga0115027_109383802
34Ga0116012_10421632
35Ga0116587_10400031
36Ga0116232_11818642
37Ga0116232_12037433
38Ga0116233_11970381
39Ga0123334_12506751
40Ga0116173_11534603
41Ga0123335_10205996
42Ga0123335_14757171
43Ga0116142_102423352
44Ga0116144_103070402
45Ga0116144_105480211
46Ga0116176_100843102
47Ga0116176_105607061
48Ga0116171_101106633
49Ga0116171_102263771
50Ga0116171_103955273
51Ga0116171_104244481
52Ga0116171_104736072
53Ga0116171_105930401
54Ga0116171_107293871
55Ga0116141_104360731
56Ga0116170_102501654
57Ga0116170_106927432
58Ga0116163_10578481
59Ga0116163_10773651
60Ga0116163_10826611
61Ga0116163_11055813
62Ga0116163_11065741
63Ga0116163_12327561
64Ga0116155_101188092
65Ga0116155_101327433
66Ga0116155_101495833
67Ga0116155_101806041
68Ga0116155_101850232
69Ga0116155_102103541
70Ga0116155_102201282
71Ga0116155_103156722
72Ga0116155_104117952
73Ga0116164_100471983
74Ga0116164_101614832
75Ga0116154_100216651
76Ga0116154_101578131
77Ga0116154_101634924
78Ga0116154_102147901
79Ga0116154_102636981
80Ga0116154_104841072
81Ga0116151_103891322
82Ga0116178_104508212
83Ga0116153_101487441
84Ga0116153_102341561
85Ga0130016_101446732
86Ga0130016_103934871
87Ga0116235_10555771
88Ga0116239_103751672
89Ga0116240_101246334
90Ga0116240_103540332
91Ga0116244_100997814
92Ga0116248_102956161
93Ga0116247_101103243
94Ga0116247_103407301
95Ga0116236_101570712
96Ga0116236_102203902
97Ga0116236_105172013
98Ga0116249_107608323
99Ga0116241_101200701
100Ga0116241_101570775
101Ga0116241_102192991
102Ga0116241_102505374
103Ga0116241_104370231
104Ga0116241_106651621
105Ga0172365_102542711
106Ga0172364_106262391
107Ga0075324_11401271
108Ga0075317_10746171
109Ga0179938_11915972
110Ga0179937_10259412
111Ga0214088_11560832
112Ga0214088_12073911
113Ga0214088_12657031
114Ga0214088_15491211
115Ga0214088_16855544
116Ga0226659_101630422
117Ga0255812_104618401
118Ga0255811_105773312
119Ga0255811_109285391
120Ga0209408_10252874
121Ga0209408_10557172
122Ga0209744_10552444
123Ga0209203_10674673
124Ga0209203_10801471
125Ga0209203_11501551
126Ga0209507_10294992
127Ga0209507_10603361
128Ga0209507_11197181
129Ga0209310_10126091
130Ga0209310_11075431
131Ga0209310_11249442
132Ga0209745_10311703
133Ga0209745_10601611
134Ga0208459_10066568
135Ga0209607_10322672
136Ga0209099_10396674
137Ga0209099_10656263
138Ga0209605_11449243
139Ga0208460_101764243
140Ga0209202_10526391
141Ga0209202_10607612
142Ga0209202_10952043
143Ga0209202_11146372
144Ga0209202_11230911
145Ga0208290_10004553
146Ga0209723_10849451
147Ga0209164_10466392
148Ga0209467_10202284
149Ga0209467_10760541
150Ga0209467_10941952
151Ga0209467_11069531
152Ga0209467_11479641
153Ga0209467_12191481
154Ga0209575_101792021
155Ga0209575_102035172
156Ga0209575_102422373
157Ga0209575_102975101
158Ga0209373_101876771
159Ga0209373_101948521
160Ga0209373_102134941
161Ga0209800_100058731
162Ga0209800_100074601
163Ga0209800_101116871
164Ga0209800_102624711
165Ga0209800_103367682
166Ga0209262_100433653
167Ga0209262_101440941
168Ga0209262_103387782
169Ga0209450_106784752
170Ga0255347_11216451
171Ga0255347_11329291
172Ga0302242_11277781
173Ga0307326_1054133
174Ga0167331_10471021
175Ga0311022_101397052
176Ga0311022_126346001
177Ga0134835_10101391
178Ga0134835_10836951
179Ga0307348_1040141
180Ga0316601_1011846293
181Ga0316613_106795771
182Ga0316600_111634331
183Ga0316629_102962511
184Ga0316616_1007374562
185Ga0370507_0147830_2_124
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 50.00%    β-sheet: 0.00%    Coil/Unstructured: 50.00%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

5101520253035NVRRYVALAQSRGGARFCTRGAMQDYAVITLFSRWQKPSequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.30
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
72.4%27.6%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds



Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Freshwater Sediment
Wetland
Freshwater Lake Sediment
Sediment
Freshwater Wetlands
Freshwater
Sediment (Intertidal)
Sediment
Sediment
Agricultural Soil
Arctic Peat Soil
Soil
Untreated Peat Soil
Natural And Restored Wetlands
Deep Subsurface
Wastewater
Anaerobic Digestor Sludge
Activated Sludge
Hydrocarbon Resource Environments
Biosolids
Wastewater Treatment Plant
Enrichment Culture
Anaerobic Biogas Reactor
Anaerobic Digester Digestate
Granular Sludge
Fermentation Pit Mud
Wastewater
Biogas Fermentantion
13.0%3.8%3.2%47.0%5.4%4.3%3.2%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
Draft_10490643300000507Hydrocarbon Resource EnvironmentsMLAANVRRYVALPQSRGGACFCTRGAVQDYAVISYFSR
Draft_1013017713300000558Hydrocarbon Resource EnvironmentsMAHNVRRYVALAQSRGGACFFTRGAMQDYAVIIFFSRWQKP*HQEGVPG
Draft_1015909323300000558Hydrocarbon Resource EnvironmentsRYVQLAQSRGGACFCTRGAMQGYAVISLFSRWQKP*
Draft_1075999913300000568Hydrocarbon Resource EnvironmentsMAHNVRRYVALAQSRGGACFFTRGAMQDYAVIIFFSRWQKP*
Draft_1002665213300001567Hydrocarbon Resource EnvironmentsMWAGFYYMNANVRRYVALPQSRGGARFCTRGAVQGYDVICLLSRWQKP*
Draft_1010965433300001580Hydrocarbon Resource EnvironmentsNVRRYVQLAQSRGGACFCTRGAMQDHADITLFSRWQKP*
Draft_1015905013300001580Hydrocarbon Resource EnvironmentsLIGIILGIGSNVRRYVALAQSRGGARFCTCGAMQCYDVICLFSRWQKP*
Draft_1016198913300001580Hydrocarbon Resource EnvironmentsNVRRYVALAQSRGGACFCTRGAIQDYAVITLFSRWQKP*
CSTR_101906483300002079Wastewater Treatment PlantRYVALAQSRGGACFCTRGAVQDYAVITLFSRWQKP*
JGI24708J26588_1006234523300002164Biogas FermentantionMPVKLVCLVANVRRYVALAQSRGGACFCTRGAVQDYAVITLFSRWQKP*
JGI24712J26585_1005319323300002168Biogas FermentantionLAAVLFTLAGNVRRYVALAQSRGGACFCTRGAVQDYAVITLFSRWQKP*
MLSBCLC_1002722033300002220Hydrocarbon Resource EnvironmentsMCANVRRYVQLPQSRGGACFCTRGAMQDYAVITLFSRWQ
TOLCLC_1000313313300002498Hydrocarbon Resource EnvironmentsANVRRYVQLAQSRGGACFCTRGAMQDHADITLFSRWQKP*
Ga0066604_1014749313300004241FreshwaterMSHSVIIAHNVRRYVALPQCRGGACFCTRGAVQDYDVIGLFSRWQKP*
Ga0066601_1018974913300004242FreshwaterMLVPNVRRYVLLAQSRGGTRFCSRGAVQDYAVITLFSRWQKP
Ga0066599_10016355413300004282FreshwaterMVHNVRRYVQLAQSRGGAHFCIRGAMQDYDVVRLFSRWQKP*
Ga0074471_1098486013300005831Sediment (Intertidal)LPKTICANVRRYVQLAQLRGGTRFCTRDAMQGYAVITLFSRWQKP*
Ga0079037_10010766423300006224Freshwater WetlandsMIAGKVQINHNVWRYVQLAQLRGGECFCTRGAMQDYTVISLLSRWQKP*
Ga0079102_103109433300006381Anaerobic Digestor SludgeRYVALAQSRGGACFCTRGAMQDYDVICLFSRWQKP*
Ga0075525_1004488313300006636Arctic Peat SoilMGLLPQSRGGTRFCTRGAMQDYAVISLFSRWQKP*
Ga0101727_11561513300006653SedimentRYVALPQSRGGACFCTRGAVQDYAVNSLFSRWQKP*
Ga0101756_10718643300006668SedimentNVRRYVALAQSRGDARFYTRGAMCDYDVITLFSRWQKP*
Ga0101935_103971113300006835SedimentYVALAQSRGGACFCTRGVMQDYDVVCLFSRWQKP*
Ga0102489_10421553300006882SedimentVRRYVALAQSRGGACFCTRGAMQDYAVITLFSRWQKP*
Ga0102492_10627213300006888SedimentPNVRRYVALPQSRGGACFCTRGAVQDYAVNSLFSRWQKP*
Ga0102492_14202423300006888SedimentPITIMLAAIVTNVRRYVALAQSRGGARFCTRGEMQDYATITLFLRWQKP*
Ga0079303_1016830433300006930Deep SubsurfacePNVRRYVQLAQSRGGARFCTRGAVQDYAVITLFSRWQKP*
Ga0075524_1013175913300006950Arctic Peat SoilMGLLPQIRGGTRFCTRGAMQDYAVITLFSRWQKP*
Ga0075524_1025367213300006950Arctic Peat SoilMHVSTCLIMHPNVRRYVQLAQSRGGARFCTRDAMRDYAVITLFS
Ga0111484_100777733300007896SedimentVKLGLNITARRYVQLAQLRGGTRFCTRGAMKDYAVSSLLSRWQKP*
Ga0105099_1091288413300009082Freshwater SedimentRYVALAQSRGGACFCTRGAMQDYAVITLFSRWQKP*
Ga0079224_10460131523300009095Agricultural SoilRRYVALAQSRGGACFCTRGAVQDYEVISLFSRWQKP*
Ga0115027_1093838023300009131WetlandFWEVTYCCVVKMAGNVRRYVALAQSRGGARFCTRGAMQDYDVICLFSRWQKP*
Ga0116012_104216323300009302SedimentYVALAQSRGGACFCTRGAVQDYAVITLFSRWQKP*
Ga0116587_104000313300009406SedimentPCMQHNVRRYVALVRQLADGGACFCTRGAIQGYAVICLLSRWQKP*
Ga0116232_118186423300009588Anaerobic Biogas ReactorANVRRYVALAQSRGGACFCTRGAVQDYAVITLFSRWQKP*
Ga0116232_120374333300009588Anaerobic Biogas ReactorRYVALAQSRGGACFCTRGAMQGYAFITLFSRWQKP*
Ga0116233_119703813300009589Anaerobic Biogas ReactorYVALAQSRGGACFCTRGAIQGYDAICLFSRWQKP*
Ga0123334_125067513300009671Anaerobic Biogas ReactorMNSFSLVGNVRRYVALAQSRGGACFCTRGAVQDYAVITLFS
Ga0116173_115346033300009674Anaerobic Digestor SludgeMLPNVRRYVQLAQSRGGARFCTRGAMQGKAVITLFSRWQKP*
Ga0123335_102059963300009680Anaerobic Biogas ReactorNARRYVALAQSRGGACFCTRGAMQDYKVICLFSRWQKP*
Ga0123335_147571713300009680Anaerobic Biogas ReactorMLPNVRRYVQLAQSRGGTRFCTRGAMQGYAVITLFSR
Ga0116142_1024233523300009685Anaerobic Digestor SludgeNVRRYVALAQSRGGARFCTRGAMQDYDVIWLFSRWQKP*
Ga0116144_1030704023300009687Anaerobic Digestor SludgeRRYVQLAQSRGGACFCTRGAMQGYAVITLFSRWQKP*
Ga0116144_1054802113300009687Anaerobic Digestor SludgeRYVALAQSRGGACFCTRGAMRDYDVVCLFSRWQKP*
Ga0116176_1008431023300009688Anaerobic Digestor SludgeMCDVFFKMCGNVRRYVALAQLRGGACFCTRGAIQGYAVITLFSRWQKP*
Ga0116176_1056070613300009688Anaerobic Digestor SludgeQLPGMLPNVRRYVALAQSRGGTRFCSRGAVQDYPVNTLFSRWQKP*
Ga0116171_1011066333300009692Anaerobic Digestor SludgeRYVALAQSRGGACFCTRGAMQGYAVITLFSRWQKP*
Ga0116171_1022637713300009692Anaerobic Digestor SludgeLAANVRRYVALAQSRGGACFCTRGAMQVYAVSSLFSRWQKP*
Ga0116171_1039552733300009692Anaerobic Digestor SludgeRRYVALAQSRGGACFCTRGAMQDYAVITLLSRWQKP*
Ga0116171_1042444813300009692Anaerobic Digestor SludgeLSIGYNVRRYVALAQSRGGARFCTRGAMQDYAFITLFSRWQKP*
Ga0116171_1047360723300009692Anaerobic Digestor SludgeNVRRYVALAQSRGGARFCTRGAMQDYGVICLFSRWQKP*
Ga0116171_1059304013300009692Anaerobic Digestor SludgeMKIGHNVRRYVALAQSRGGARFCTRGAMQDYGVICLFSR
Ga0116171_1072938713300009692Anaerobic Digestor SludgeMHANVRRYVQLAQSRGGACFCTRGAMQGNAVITLFSRWQKP*
Ga0116141_1043607313300009693Anaerobic Digestor SludgeNVRRYVALAQSRGGARFCTRGAMQDYAFITLFSRWQKP*
Ga0116170_1025016543300009694Anaerobic Digestor SludgeYVALAQSRGGACFCTRGAMQDYDVICLFSRWQKP*
Ga0116170_1069274323300009694Anaerobic Digestor SludgeNVRRYVALAQSRGGARFCTRGAMQDYAVITLFSRWQKP*
Ga0116163_105784813300009713Anaerobic Digestor SludgeVRRYVQLAQSRGGACFCTRGAMQDYAVITLFSRWQKP*
Ga0116163_107736513300009713Anaerobic Digestor SludgeMLMLPNVRRYVALAQSRGGARFCTRGAMQDYPVITLFSRWQKP*
Ga0116163_108266113300009713Anaerobic Digestor SludgeRRYVQLAQSRGGACFCTRGAMQDYAVITLFSRWQKP*
Ga0116163_110558133300009713Anaerobic Digestor SludgeRRYVALAQSRGGACFCTRGAMQGYAVITLFSRWQKP*
Ga0116163_110657413300009713Anaerobic Digestor SludgeNVRRYVALAQSRGGACFCTRGAVQDYAVITLFSRWQKP*
Ga0116163_123275613300009713Anaerobic Digestor SludgeNVRRYVALAQSRGGACFCNRGAMQDYAVISLFSRWQKP*
Ga0116155_1011880923300009771Anaerobic Digestor SludgeRRYVALAQSRGGACFCTRGAMQDYAVITLFSRWQKP*
Ga0116155_1013274333300009771Anaerobic Digestor SludgeRYVQLAQSRGGACFCTRGAMQGYAVITLFSRWQKP*
Ga0116155_1014958333300009771Anaerobic Digestor SludgeMLTQLSLAGNVRRYVQLVRQLADGGARFCTRGAVQDYTVITLFSRWQKP*
Ga0116155_1018060413300009771Anaerobic Digestor SludgeRYVALAQSRGGACFCTRGAMQGYAVSILFSRWQKP*
Ga0116155_1018502323300009771Anaerobic Digestor SludgeVHNVRRYVQLAQSRGGACFCTRGAMQDLAGITLFSRWQKP*
Ga0116155_1021035413300009771Anaerobic Digestor SludgeRYVALPQSRGGARFCTRGAMQGYDVITLFSRWQKP*
Ga0116155_1022012823300009771Anaerobic Digestor SludgeTANVRRYVQLAQSRGGACFCTRGAMKDYAVITLFSRWQKP*
Ga0116155_1031567223300009771Anaerobic Digestor SludgeFLQIYNTKAYIMLTQLSLAGNVRRYVALAQSRGGARFCTRGAVQDYTVITLFSRWQKP*
Ga0116155_1041179523300009771Anaerobic Digestor SludgeVVVLLIITANVRRYVALAQSRGGARFCTRGAMQGY
Ga0116164_1004719833300009775Anaerobic Digestor SludgeAFSFQLIINCLHVMFANVRRYVALAQSRGGACFCTRGAVQDYAVNCLFSRWQKP*
Ga0116164_1016148323300009775Anaerobic Digestor SludgeSRFMLMLPNVRRYVALAQSRGGARFCTRGAMQDYAVITLFSRWQKP*
Ga0116154_1002166513300009776Anaerobic Digestor SludgeNVRRYVALPQSRGGACFCTRGEVQDYAVITSFSRWQKP*
Ga0116154_1015781313300009776Anaerobic Digestor SludgeLSLAGNVRRYVQLVRQLADGGARFCTRDAMQDYAIITLFSRWQKP*
Ga0116154_1016349243300009776Anaerobic Digestor SludgeYVALVRQLADGGACFCTRGAIQNYTVITLFSRWQKP*
Ga0116154_1021479013300009776Anaerobic Digestor SludgeVQCIVANVRRYVALAQSRGGARFCTRGAVQDYTVITLFSR
Ga0116154_1026369813300009776Anaerobic Digestor SludgeMQTIVANVRRYVALAQSRGGACFCTRGAVRDYTVNSLFSR
Ga0116154_1048410723300009776Anaerobic Digestor SludgeMHNVRRYVQLAQSRGGARFCTRGAMQDYAVISLFSRWQKP
Ga0116151_1038913223300009778Anaerobic Digestor SludgeLSRFMLMLPNVRRYVALAQSRGGARFCTRGAMQDYPVITLFSRWQKP*
Ga0116178_1045082123300009781Anaerobic Digestor SludgeYVALAQSRGGACFCTRGAMQDYDVIWLFSRWQKP*
Ga0116153_1014874413300009838Anaerobic Digestor SludgeYVALAQSRGGTCFCTRGAMQDFDVITLFSRWQKP*
Ga0116153_1023415613300009838Anaerobic Digestor SludgeANVRRYVALPQSRGGACFCTRGAMQDYAVICLFSRWQKP*
Ga0130016_1014467323300009868WastewaterMSKMVANVRRYVALAQSRGGACFCTRGAMQDLAVISLLSRWQKP*
Ga0130016_1039348713300009868WastewaterYVALAQSRGGACFCTRGAMQGYAVITLFSRWQKP*
Ga0116235_105557713300010310Anaerobic Biogas ReactorVRRYVALAQSRGGACFCTRGAVQDYAVITLFSRWQKP*
Ga0116239_1037516723300010346Anaerobic Digestor SludgeIVTNVRRYVQLAQSRGGACFCTSGAMQDYAGITLFSRWQKP*
Ga0116240_1012463343300010349Anaerobic Digestor SludgeYVALAQSRGGACFCTRGAMQEYDVICLFSRWQKP*
Ga0116240_1035403323300010349Anaerobic Digestor SludgeVLKVAANVRRYVQLAQSRGGTRFCTRGAMQGYAVITLFSRWQKP*
Ga0116244_1009978143300010350Anaerobic Digestor SludgeHVMFANVRRYVALAQSRGGACFCTRGAVQDYAVNCLFSRWQKP*
Ga0116248_1029561613300010351Anaerobic Digestor SludgeMVGNVRRYVALAQSRGGACFCTRGAVQDYAVISLF
Ga0116247_1011032433300010352Anaerobic Digestor SludgeKLILTANVRRYVALAQSRGGARFCTRGAMQDYAFITLFSRWQKP*
Ga0116247_1034073013300010352Anaerobic Digestor SludgeIAAIVTNVRRYVQLAQSRGGARFCTRGAMQDYDVNCLFSRWQKP*
Ga0116236_1015707123300010353Anaerobic Digestor SludgeVGLSEWFKMHLLSIGYNVRRYVALAQSRGGARFCTRGAMQDYAFITLFSRWQKP*
Ga0116236_1022039023300010353Anaerobic Digestor SludgeYFFLAAIVTNVRRYVALAQSRGGARFCTRGAMQDYAVITLFSRWQKP*
Ga0116236_1051720133300010353Anaerobic Digestor SludgeMRLMLANVRRYVQLAQSRGGACFCTRGAVWDYAVITLFSRW
Ga0116249_1076083233300010357Anaerobic Digestor SludgeNVRRYVALAQSRGGACFCTRGVMQDYAVITLFSRWQKP*
Ga0116241_1012007013300010429Anaerobic Digestor SludgeYFEFAANVRRYVQLAQSRGGARFCTRGAMQDYAVISLFSRWQKP*
Ga0116241_1015707753300010429Anaerobic Digestor SludgeMLTQLSLAGNVRRYVQLVRQLADGGARFCTRDAMQDYAVITLFSRWQKP*
Ga0116241_1021929913300010429Anaerobic Digestor SludgeYVALAQSRGGACFCTRGAMKGYAVISLFSRWQKP*
Ga0116241_1025053743300010429Anaerobic Digestor SludgeMLTQLSLAGNVRRYVALAQSRGGARFCTRGAVQDYTVITLFSRWQKP*
Ga0116241_1043702313300010429Anaerobic Digestor SludgeMQTIVANVRRYVALAQSRGGACFCTRGAVRDYTVNSLFSRW
Ga0116241_1066516213300010429Anaerobic Digestor SludgeRRYVQLAESRGGACFCTRDAMQDYAVITLFSRWQKP*
(restricted) Ga0172365_1025427113300013127SedimentFKSGFAMAHNVWRYVALAQSRGGACFCTRGAMQDYAVITLFSRWQKP*
(restricted) Ga0172364_1062623913300013129SedimentKLIRKSQNSMTTNVRRYVQLAQSRGGARFCTRDAMQDYAVITLFSRWQKP*
Ga0075324_114012713300014263Natural And Restored WetlandsYVALAQSRGGACFCTRGAMQVYAVITLFSRWQKP*
Ga0075317_107461713300014309Natural And Restored WetlandsGMGLLPQSRGGTCFCTRGAVQSYAVISLFSRWQKP*
Ga0179938_119159723300019210Anaerobic Digestor SludgeLQYMPHNVRRYVQLVRQLADGGACFCTRGAMQGYAVITLFSRWQKP
Ga0179937_102594123300019247Anaerobic Digestor SludgeLMHGNVPRYVQLAQSRGGARFCTRGAMQDYAVISLFSRWQKP
Ga0214088_115608323300020814Granular SludgeRYVALAQSRGGACFCTRGAMQGYAVITLFSRWQKP
Ga0214088_120739113300020814Granular SludgeNVRRYVALPQSRGGACFCTRGAMKDYAVITLFSRWQKP
Ga0214088_126570313300020814Granular SludgeRRYVALAQSRGGACFCTRGAMQGYAVITLFSRWQKP
Ga0214088_154912113300020814Granular SludgeNHNVRRYVALPQSRGGACFCTRGAVQGNAVINLFSRWQKP
Ga0214088_168555443300020814Granular SludgeMFANVRRYVALAQSRRGARFCTRGAVQDYDVNSLFSRWQKP
Ga0226659_1016304223300021603Granular SludgeIMLPNVRRYVQLAQSRGGTRFCTRGAMQGYAVITLFSRWQKP
Ga0255812_1046184013300023203Anaerobic Digester DigestateMRHNVRRYVALAQSRGGARFCTRGAMQDYAFITLF
Ga0255811_1057733123300023207Anaerobic Digester DigestateRYVQLAQSRGGTCFCTRGAVQDYAVNTLFSRWQKP
Ga0255811_1092853913300023207Anaerobic Digester DigestateVRRYVALPQSRGGAWFCTRGAMQGYAVFTLFSRWQKP
Ga0209408_102528743300025611Anaerobic Digestor SludgeNVRRYVALAQSRGGACFCTRGAVQDYAVITLFSRWQKP
Ga0209408_105571723300025611Anaerobic Digestor SludgeSNVRRYVALAQSRGGACFCTRGAMLDYAVITLFSRWQKP
Ga0209744_105524443300025692Arctic Peat SoilLTFRRYVQLALIRGGACFCTRGAMQDYAVISLFSRWQKP
Ga0209203_106746733300025702Anaerobic Digestor SludgeVRRYVQLAQSRGGACFCTRGAMQDYAVITLFSRWQKP
Ga0209203_108014713300025702Anaerobic Digestor SludgeLSFIRYSIATNVRRYVALAQSRGGACFCTRGAEQDYAVISLFSRWQKP
Ga0209203_115015513300025702Anaerobic Digestor SludgeNVRRYVALAQSRGGACFCTRGAMRDYTVITLFSRWQKP
Ga0209507_102949923300025706Anaerobic Digestor SludgeMCDVFFKMCGNVRRYVALAQLRGGACFCTRGAIQGYAVITLFSRWQKP
Ga0209507_106033613300025706Anaerobic Digestor SludgeSVFAHNVRRYVQLAQSRGGTRFCTRGAMQGYAVITLFSRWQKP
Ga0209507_111971813300025706Anaerobic Digestor SludgeMALNLKLTANVRRYVALTQSRGGARFCTRGAMQGYAVITLFSRWQKP
Ga0209310_101260913300025715Anaerobic Digestor SludgeNVRRYVALPQSRGGACFCTRGEVQDYAVITSFSRWQKP
Ga0209310_110754313300025715Anaerobic Digestor SludgeVVFDSLAANVRRYVQLAQSRGGTCFCTRGAMQDYAVIC
Ga0209310_112494423300025715Anaerobic Digestor SludgeRRYVQLAESRGGACFCTRDAMQDYAVITLFSRWQKP
Ga0209745_103117033300025739Arctic Peat SoilMANVRRYVLLAQLRGGARFCTRGAMKDYAVICLLSRWQKP
Ga0209745_106016113300025739Arctic Peat SoilRRYVQLAQSRGGACFCTRDAMQRYTVISLLSRWQKP
Ga0208459_100665683300025748Anaerobic Digestor SludgeMLPNVRRYVQLAQSRGGARFCTRGAMQGKAVITLFSRWQKP
Ga0209607_103226723300025847Anaerobic Digestor SludgeLSVYVIFIIAGNVRRYVALAQSRGGARFCTRDAMQDYAVITLFSRWQKP
Ga0209099_103966743300025858Anaerobic Digestor SludgeDVPFHIVRCDFMHANVRRYVQLAQSRGGACFCTRGAMQGNAVITLFSRWQKP
Ga0209099_106562633300025858Anaerobic Digestor SludgeLSIGYNVRRYVALAQSRGGARFCTRGAMQDYAFITLFSRWQKP
Ga0209605_114492433300025861Anaerobic Digestor SludgeMIISRRLIMLHNVRRYVALAQSRGGACFCTRGAMLDYAVIT
Ga0208460_1017642433300025877Anaerobic Digestor SludgeMCDVFFKMCGNVRRYVALAQLRGGACFCTRGAIQGYAVIT
Ga0209202_105263913300025902Anaerobic Digestor SludgeRRYVQLAQSRGGACFCTRGAMQDYAVITLFSRWQKP
Ga0209202_106076123300025902Anaerobic Digestor SludgeMLTQLSLAGNVRRYVQLVRQLADGGARFCTRDAMQDYAVITFFSRWQKP
Ga0209202_109520433300025902Anaerobic Digestor SludgeMLTQLSLAGNVRRYVALAQSRGGARFCTRGAVQDYTVITLFSRWQKP
Ga0209202_111463723300025902Anaerobic Digestor SludgeLQRSRYVALAQSRGGACFCTRDAMQDYAVITLFSRWQKP
Ga0209202_112309113300025902Anaerobic Digestor SludgeRYVALAQSRGGACFCTRGAMQDYDVICLFSRWQKP
Ga0208290_100045533300026066Natural And Restored WetlandsANVRRYVALAQSRGGARFCTRGAVQSYAVSSLFSRWQKP
Ga0209723_108494513300026311Anaerobic Biogas ReactorFIMLPNVRRYVQLAQSRGGTRFCTRGAMQGYAVITLFSRWQKP
Ga0209164_104663923300027690Enrichment CultureMSKMVANVRRYVALAQSRGGACFWTRGAVQDYPVDSLFSRWQKP
Ga0209467_102022843300027719FreshwaterMAYNVRRYVALAQIRGGACFCTRGAMQDYVVSILFSRWQKP
Ga0209467_107605413300027719FreshwaterNVRRYVALAQSRGGARFCTRGAMQGYAVITLFSRWQKP
Ga0209467_109419523300027719FreshwaterNVWRYVQLAQSRGGACFCTRGAMQDYAVITLLSRWQKP
Ga0209467_110695313300027719FreshwaterMYFSLQLTANVRRYVQLAQSRGGAGFCTRGAMQGYAVIALFSRWQKP
Ga0209467_114796413300027719FreshwaterATIGPNVWRYVALAQSRGGARFCTRGAIQGNAVITLFSRWQKP
Ga0209467_121914813300027719FreshwaterLLGLKHNVRRYVALPQSRGGACFCTRGAVQDYAVSSLFSRWQKP
Ga0209575_1017920213300027739FreshwaterVLSVTVAGNVRRYVALAQSRGGARFCTRGAMQGYAVITLFSRW
Ga0209575_1020351723300027739FreshwaterRYVQLAESRGGACFCTRDAMQDYAVITLFSRWQKP
Ga0209575_1024223733300027739FreshwaterMYFSLQLTANVRRYVALAQSLGGACFCTRGAMQDYAVITLFSR
Ga0209575_1029751013300027739FreshwaterYHLAAIVPNVWRYVALAQSRGGARFCTRGAIQGNAVITLFSRWQKP
Ga0209373_1018767713300027796FreshwaterFFRLRLAGNVRRYVALAQSRGGACFCTRGAVLGYPVSSLFSRWQKP
Ga0209373_1019485213300027796FreshwaterMXCSVIFANVRRYVQLAQSRGGTRFCTRGAMQGYAVITLF
Ga0209373_1021349413300027796FreshwaterVLSVTVAGNVRRYVALAQSRGGARFCTRGAMQGYAVITLFSR
Ga0209800_1000587313300027800FreshwaterMFTANVRRYVQLAQSRGGTRFCTRGAMQGYAVITL
Ga0209800_1000746013300027800FreshwaterMLANVRRYVALPQSRGGACFCTRGAQQGYAVSSLFSRWQKP
Ga0209800_1011168713300027800FreshwaterVRRYVALAQSRGGARFCTRGAMQGYAVITLFSRWQKP
Ga0209800_1026247113300027800FreshwaterLIIKAAIVPNVWRYVALAQSRGGARFCTRGAIQGNAVITLFSRWQKP
Ga0209800_1033676823300027800FreshwaterMVWVNMVYNVRRYVALPQSRGGACFCTRGAMQDYAVITLFSR
Ga0209262_1004336533300027841FreshwaterLRLAGNVRRYVALAQSRGGACFCTRGAVQDYAAFTLFSRWQ
Ga0209262_1014409413300027841FreshwaterQLTANVWRYVQLAQSRGGACFCTRGAMQDYAVITLLSRWQKP
Ga0209262_1033877823300027841FreshwaterMIRLRMRHNVRRYVQLVRQLADGGACFCTRGAMQGYD
Ga0209450_1067847523300027885Freshwater Lake SedimentMSNFINWSSNIAANVRRYVALAQSRGGARFCTRGAVQGYTVITLFSRWQKP
(restricted) Ga0255347_112164513300028593WastewaterGIGGITANVRRYVALAQSRGGACFCTRGAVQDYAVITLFSRWQKP
(restricted) Ga0255347_113292913300028593WastewaterMNANVRRYVALAQSRGGACFCTRGAVQDYAVITLFSRWQKP
Ga0302242_112777813300028634Activated SludgeNVRRYVALAQSRGGACLCTRGAMQGHAVITLFSRWQKP
Ga0307326_10541333300028846Anaerobic Digestor SludgeANNVLLAPLRGGACFCTRDAMQDYAVITLYSRWQKP
Ga0167331_104710213300029311BiosolidsVRRYVALAQSRGGACFCTRGAVQDYEVISLFSRWQKP
Ga0311022_1013970523300029799Anaerobic Digester DigestateMAGNVRRYVALAQSRGGACFCTRGVMQDYAVITLFSRWQKP
Ga0311022_1263460013300029799Anaerobic Digester DigestateRYVALAQSRGGACFCTRGAMQDYKVICLFSRWQKP
Ga0134835_101013913300029825Fermentation Pit MudRYVALPQSRGGACFCTRGAVQGNAVINLFSRWQKP
Ga0134835_108369513300029825Fermentation Pit MudVRRYVQLAQSRGGARFCTRGAMQGCDVVLLFSRWQKP
Ga0307348_10401413300029838Anaerobic Digestor SludgeRYVALAQSRGGACFCTRGAMQGYAVITLLSRWQKP
Ga0316601_10118462933300033419SoilRFSKPNNVRRYVALAQSRGGACFCTRGAVQNYAVNTLFSRWQKP
Ga0316613_1067957713300033434SoilMNQLQIFTNIVTNVRRYVQLVRQLADGGACFCTRGAVQGYDVICLLSRWQKP
Ga0316600_1116343313300033481SoilRRYVQLAQLRGGTCFCTRGLMQDYAVSSLLSRWQKP
Ga0316629_1029625113300033483SoilRYVALAQSRGGACFCTRGAVQNYAVNTLFSRWQKP
Ga0316616_10073745623300033521SoilMNQLQILTNIVANVRRYVQLVRQLADGGACFCTRSAMQDYAVISLFSRWQKP
Ga0370507_0147830_2_1243300034158Untreated Peat SoilILHFLILLCANVRRYVALPQSRGGACFCTRGAMQDYAFIS


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.