NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F030447

Metagenome / Metatranscriptome Family F030447

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F030447
Family Type Metagenome / Metatranscriptome
Number of Sequences 185
Average Sequence Length 65 residues
Representative Sequence MGKIVFAGAMSHVLDPDYYQRACGDDGRRKVTACMAEIARMGERFTATRPDALIVVADDHLNAFS
Number of Associated Samples 152
Number of Associated Scaffolds 185

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 94.59 %
% of genes near scaffold ends (potentially truncated) 98.38 %
% of genes from short scaffolds (< 2000 bps) 90.81 %
Associated GOLD sequencing projects 140
AlphaFold2 3D model prediction Yes
3D model pTM-score0.60

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (96.216 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(14.054 % of family members)
Environment Ontology (ENVO) Unclassified
(24.865 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(38.919 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.
1ICChiseqgaiiFebDRAFT_106315052
2F14TC_1000686162
3Ga0055440_100306903
4Ga0066398_101973672
5Ga0066672_109790501
6Ga0066673_101219061
7Ga0066690_100863193
8Ga0066688_101951991
9Ga0066688_103424482
10Ga0066688_104895361
11Ga0066678_102965822
12Ga0066678_108111301
13Ga0066678_111190231
14Ga0070690_1003229932
15Ga0066388_1083080401
16Ga0070692_104066111
17Ga0070668_1008900911
18Ga0070675_1012144321
19Ga0070709_112653712
20Ga0070705_1013598172
21Ga0070708_1000409651
22Ga0070708_1006781022
23Ga0070708_1018898241
24Ga0066689_108642312
25Ga0070706_1007697551
26Ga0070706_1018770352
27Ga0070707_1020018012
28Ga0070698_1004236942
29Ga0070699_1016366272
30Ga0070699_1016844931
31Ga0070697_1006715041
32Ga0066704_107395692
33Ga0066698_102902671
34Ga0066700_103911852
35Ga0066700_107362851
36Ga0066703_102972271
37Ga0066702_101293631
38Ga0068854_1005152483
39Ga0066691_107696171
40Ga0070702_1002305601
41Ga0070702_1012345952
42Ga0068862_1008913812
43Ga0075296_10287491
44Ga0066696_107876011
45Ga0066652_1012705872
46Ga0068871_1019187272
47Ga0066653_100189013
48Ga0066658_109119571
49Ga0066660_103373831
50Ga0079220_113808161
51Ga0075428_1012794261
52Ga0075421_1005637902
53Ga0075421_1016317911
54Ga0075421_1021583982
55Ga0075431_1004467611
56Ga0075433_112452511
57Ga0068865_1017497872
58Ga0068865_1018010552
59Ga0079215_112862292
60Ga0075426_111909132
61Ga0075419_102351771
62Ga0066710_1011679641
63Ga0099829_107268461
64Ga0099830_107337682
65Ga0111539_100939661
66Ga0111539_114202731
67Ga0075418_110619253
68Ga0066709_1038371243
69Ga0114945_100246272
70Ga0114945_101312293
71Ga0105249_128318281
72Ga0105059_10356812
73Ga0105089_10501122
74Ga0105085_10101133
75Ga0134070_102676762
76Ga0134082_100194461
77Ga0134109_100612681
78Ga0134109_101048452
79Ga0134080_100166841
80Ga0134080_101044772
81Ga0126370_120683401
82Ga0126376_132245472
83Ga0126372_129555522
84Ga0126377_114506621
85Ga0126379_130182811
86Ga0137393_114852841
87Ga0137326_11293361
88Ga0137464_11153831
89Ga0137364_102306263
90Ga0137399_101190753
91Ga0137399_102024341
92Ga0137380_106378731
93Ga0137381_101234131
94Ga0137381_114243571
95Ga0137376_103696993
96Ga0137385_103791982
97Ga0134046_12330111
98Ga0137394_108607751
99Ga0137416_102290391
100Ga0137416_104794911
101Ga0137404_110826791
102Ga0153915_129025022
103Ga0153915_130334211
104Ga0153915_133533422
105Ga0126375_117361981
106Ga0126375_120559572
107Ga0126369_102129381
108Ga0134087_103597322
109Ga0134078_102608451
110Ga0075301_11307511
111Ga0134072_103939992
112Ga0134089_100850962
113Ga0134085_105810411
114Ga0134069_11925602
115Ga0134112_104557842
116Ga0134074_10040961
117Ga0134083_106025931
118Ga0187780_104369322
119Ga0187767_102009151
120Ga0190265_101671041
121Ga0190265_104770333
122Ga0190265_122578151
123Ga0190272_102157621
124Ga0190270_133982281
125Ga0187893_106883071
126Ga0184649_15573991
127Ga0210406_107001782
128Ga0126371_133047041
129Ga0126371_134452431
130Ga0224452_10432323
131Ga0212128_100039509
132Ga0212128_105439982
133Ga0222622_102634151
134Ga0209640_102202655
135Ga0210132_10141441
136Ga0210108_10581102
137Ga0207653_100236791
138Ga0207653_100276623
139Ga0207684_104164243
140Ga0207646_107733881
141Ga0207704_115765081
142Ga0207712_117360412
143Ga0207648_110742602
144Ga0207676_122898581
145Ga0209235_10597423
146Ga0209240_12596822
147Ga0209239_11957691
148Ga0209152_101048823
149Ga0209801_11337001
150Ga0209267_11995431
151Ga0209156_101560772
152Ga0209897_10428192
153Ga0256866_10086621
154Ga0209180_102141702
155Ga0209180_102821571
156Ga0209814_100882314
157Ga0209590_102483491
158Ga0209590_105975713
159Ga0209590_107631641
160Ga0209382_110946472
161Ga0268264_124009972
162Ga0137415_101383171
163Ga0247818_102801223
164Ga0307312_102125941
165Ga0299907_110900881
166Ga0247826_110724141
167Ga0255310_101202702
168Ga0299913_100954151
169Ga0170824_1095010682
170Ga0255312_10035224
171Ga0307469_110229981
172Ga0307468_1000045258
173Ga0307468_1006366782
174Ga0318495_100140331
175Ga0310912_101279651
176Ga0310916_108437191
177Ga0307414_121621862
178Ga0318562_100820101
179Ga0318563_102427911
180Ga0310906_106725161
181Ga0307470_112655812
182Ga0307472_1015024812
183Ga0307472_1017643192
184Ga0364946_064724_557_775
185Ga0373959_0151014_3_179
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 32.26%    β-sheet: 8.60%    Coil/Unstructured: 59.14%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

5101520253035404550556065MGKIVFAGAMSHVLDPDYYQRACGDDGRRKVTACMAEIARMGERFTATRPDALIVVADDHLNAFSSequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.60
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
96.2%3.8%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds



Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Groundwater Sediment
Freshwater Wetlands
Natural And Restored Wetlands
Thermal Springs
Soil
Groundwater Sediment
Soil
Vadose Zone Soil
Tropical Forest Soil
Grasslands Soil
Agricultural Soil
Soil
Grasslands Soil
Soil
Forest Soil
Hardwood Forest Soil
Soil
Soil
Natural And Restored Wetlands
Rice Paddy Soil
Tropical Peatland
Soil
Tropical Forest Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Switchgrass Rhizosphere
Soil
Groundwater Sand
Sandy Soil
Microbial Mat On Rocks
Sediment
Corn Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Miscanthus Rhizosphere
Populus Rhizosphere
Rhizosphere
Switchgrass Rhizosphere
Rhizosphere Soil
Switchgrass Rhizosphere
Miscanthus Rhizosphere
4.3%11.4%5.4%8.6%14.1%3.2%3.2%10.3%7.0%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
ICChiseqgaiiFebDRAFT_1063150523300000363SoilMGDIVFAGAMSHVLDPDYYDRACGAIGRQMVNEAMAAIAAMGERFSAKHADALIVVA
F14TC_10006861623300000559SoilMGRIVFAGAMSHVLDPDYYDRACGAVGRQTVVAVMAEIARMGERLSARQPDALIVVADDHLNAFSFNCVP
Ga0055440_1003069033300004020Natural And Restored WetlandsMGKIVFAGAMSHVLDPDYYQRACGDEGRRKTVECMTEIARMGERFTATRPDALIV
Ga0066398_1019736723300004268Tropical Forest SoilMGRIVFAAAMSHVLDPDYYERACGAEGRRKTDEAMAAIAAMGERLSTTRPDALIV
Ga0066672_1097905013300005167SoilMGKLVFAGAMSHVLDPDYYDRACGALGRRTVTECMAAIAQMGERFSATRADALVVVADDHLNAFSFNAVP
Ga0066673_1012190613300005175SoilMGKIVFAAAMSHVLDPDYYQAACGLSGRRKVEACMAEIGKLGDTLLAHRPDALIVVA
Ga0066690_1008631933300005177SoilMGKIVFAAAMSHVLDPQYYDRACGAVGRQTVEAVMAEIARMGERLSARKPDALIVVAD
Ga0066688_1019519913300005178SoilMGRIVFAAAMSHVLDPDYYERVCGAVGRRKTDEAMAAIAAMGERFSATGADALVVVADDHLNAFSFNCVPA
Ga0066688_1034244823300005178SoilMGKIVFAGAMSHVLDPDYYDHACGAVGRQKVEAAMVEIARMGERFSATKADALIVV
Ga0066688_1048953613300005178SoilMGKIVFAGAMSHVLDPEYYQRVCGDVGRQKTEEAMAAIAKMGERFSATKADALIVVADDHLN
Ga0066678_1029658223300005181SoilMGRIVFAAAMSHVLDPDYYERVCGAVGRRKTDEAMAAIAAMGERFSATGADALVVVADDHLNAFSFNCVP
Ga0066678_1081113013300005181SoilMGKIVFAAAMSHVLDPEYYEAACGLSGRRKVEACMAEIGKLGDTFLARRPDALIVVADDHLNAF
Ga0066678_1111902313300005181SoilMGTIVFAGAMSHVLDPEYYDRACGALGRRTVQACMAQIAAMGERFSATNADALVVVADDHLNAFSFNAVPA
Ga0070690_10032299323300005330Switchgrass RhizosphereMGRIVFGGAMSHVLDPDYYERACGALGRQTVVAVMAEIARMGERLSARQPDALIVVADDHLNAFSFNCVPAM
Ga0066388_10830804013300005332Tropical Forest SoilMGKIVFAGAMSHVLDPEYYDRACGVVGRKTVVAVMDEIARMGERLSAQRPDALIVVADDHLNAFSFNCVPAMCV
Ga0070692_1040661113300005345Corn, Switchgrass And Miscanthus RhizosphereMGQIVFAGAMSHVLDPDYYDRACGAAGRQKVTECMTEIARMGERLTIARPDALIVVADDHLNAFSFNAVPAI
Ga0070668_10089009113300005347Switchgrass RhizosphereMGEIVFGGAMSHVLDPDYYQAACGDLGRQKVVEAMDAIGKMGDRLVERKPDALIVVADDHMNAF
Ga0070675_10121443213300005354Miscanthus RhizosphereMGRIVFGGAMSHVLDPDYYERACGAVGRQTVVAVMDEIARMGERLSARRPDALIV
Ga0070709_1126537123300005434Corn, Switchgrass And Miscanthus RhizosphereMGRIVFAGAMSHVLDPDYYERVCGVAGRRKTEETMAAIAAMGERLSATRPDALIVVADDHLNAFSFNCVPAMCVR
Ga0070705_10135981723300005440Corn, Switchgrass And Miscanthus RhizosphereMGKIVFAGAMSHVLDPDYYQRACGDEGRRMVTDCMTEIARMGERFSATGADALIVVADDHLN
Ga0070708_10004096513300005445Corn, Switchgrass And Miscanthus RhizosphereMGKIVFAGAMSHVLDPDYYQRVCGDVGRQKTEEAMAAIAAMGERFSATKADALVVVADDHLNAFSFNCVPAMCVRI
Ga0070708_10067810223300005445Corn, Switchgrass And Miscanthus RhizosphereMGRIVFAGAMSHVLDPDYYERVCGVAGRRKTEETMAAIAAMGERLSATRPDALIVVAD
Ga0070708_10188982413300005445Corn, Switchgrass And Miscanthus RhizosphereMGKIVFAGAMSHVLDPEYYQRVCGDVGRQKTEEAMAAIAAMGERFSATKADALVVVADDHLNAFSFNCVPAMC
Ga0066689_1086423123300005447SoilMGTIVFAGAMSHVLDPEYYDRACGALGRRTVQACMAQIAAMGERFSATNADALVVVADDHLNAFSFNAVPAMCVRIG
Ga0070706_10076975513300005467Corn, Switchgrass And Miscanthus RhizosphereMGRIVFAGAMSHVLDPDYYERACGSVGRQKVVAAMAEIARMGERCSAKNADALIVVADDHLNAFSFNAVPAICVRI
Ga0070706_10187703523300005467Corn, Switchgrass And Miscanthus RhizosphereMGQIVFAGAMSHVLDPDYYDRACGPAGRQKVTECMTEIARMGERLTAARPDALIVVADDHLNAFSFNAVP
Ga0070707_10200180123300005468Corn, Switchgrass And Miscanthus RhizosphereMGQIVFAGAMSHVLDPDYYDRACGAAGRQKVTECMTEIARMGERLTIARPDALIVVADDHLNAFSF
Ga0070698_10042369423300005471Corn, Switchgrass And Miscanthus RhizosphereMGQIVFAGAMSHVLDPDYYERACGAAGRQKVTECMAEIARMGERLTAARPDALIVVADDHLNAFSFNAVP
Ga0070699_10163662723300005518Corn, Switchgrass And Miscanthus RhizosphereMGKIVFAGAMSHVLDPDYYDHACGAVGRQKVEAAMVEIARMGERFSATKADALIVVADDH
Ga0070699_10168449313300005518Corn, Switchgrass And Miscanthus RhizosphereMAMGKIVFGGAMSHVLDPEYYQAVCGDIGRQKVVAAMDAIASMGDRFVEKKADALIVVADDHMNAFSFNCVPAIC
Ga0070697_10067150413300005536Corn, Switchgrass And Miscanthus RhizosphereMGRIVFAGAMSHVLDPEYYQAACGAVGRQKVEATMAEIRRMGERLHAAKPDALIVVADDHLNAF
Ga0066704_1073956923300005557SoilMGKIVFAGAMSHVLDPDYYQRACGDEGRRMVTDCMTEIARMGERFSAIGADALIVVADDHLNAFSFN
Ga0066698_1029026713300005558SoilMGKIVFAAAMSHVLDPDYYQAACGLTGRRKVEACMAEIEKLGETFLARRPDALIVVADDHLNA
Ga0066700_1039118523300005559SoilMGKIVFAGAMSHVLDPDYYQTACGDIGRQKVIATMDAIAKMGDRFVEKKADALIVVADDHMNAFSFNCVPAICVRI
Ga0066700_1073628513300005559SoilMGKIVFAGAMSHVLDPEYYQRVCGDVGRQKTEEAMAAIAKMGERFSATKADALIVVADD
Ga0066703_1029722713300005568SoilMGKIVFAGAMSHVLDPEYYDRACGAVGRQTVEAVMAEIARMGERLSARKPDALIVVADDHLNAFSFN
Ga0066702_1012936313300005575SoilMGKIVFAGAMSHVLDPDYYQRVCGDVGRQKTEEAIAAIAKMGERFSTTNADALIVVADDHLNAFSFNC
Ga0068854_10051524833300005578Corn RhizosphereMGKIVFAGAMSHVLDPDYYQRACGDEGRQKVTACMTEIARMGERFSATRADALIVVADDHLNAFSFNAVPA
Ga0066691_1076961713300005586SoilMGTIVFAGAMSHVLDPEYYDRACGALGRRTVQACMAQIAAMGERFSATNADALVV
Ga0070702_10023056013300005615Corn, Switchgrass And Miscanthus RhizosphereMGKLVFAGAMSHVLDPDYYDKACGALGRKTVTECMAQIAQMGERFSATGADALIVVADDHLNAFSFNAVPAMCV
Ga0070702_10123459523300005615Corn, Switchgrass And Miscanthus RhizosphereMGKIVFAGAMSHVLDPDYYQRACGDEGRRKTVECMTEIARMGERLTAARPDALIVVADDHLNAFSFNAVPALC
Ga0068862_10089138123300005844Switchgrass RhizosphereMGKIVFAGAMSHVLDPDYYQRACGDEGRRMVTDCMSEIARMGERFSATGADALIVVAD
Ga0075296_102874913300005877Rice Paddy SoilMGKIVFAGAMSHVLDPDYYQRACGDEGRRTVVACMAEIARMGERFSATRADALIVVADDHLNAFSFNAVPALCV
Ga0066696_1078760113300006032SoilMGKIVFAAAMSHVLDPDYYQAACGLSGRRKVEACMAEIGKLGDTLLAHRPDALIVVADDHLNAFSFNAVP
Ga0066652_10127058723300006046SoilMGKIVFAGAMSHVLDPDYYDAACGPVGRRKVEDVMEAIRQMGARLAARSPDALIVVADDHLNAFSFNAVPALC
Ga0068871_10191872723300006358Miscanthus RhizosphereMGKIVFAGAMSHVLDPDYYQRACGDEGRRMVTDCMTEIARMGERFSATRADALIVVADDHLNAFSFNA
Ga0066653_1001890133300006791SoilMGKIVFAGAMSHVLDPDYYDAACGPVGRRKVEDVMEAIRQMGARLAARSPDALIVVADD
Ga0066658_1091195713300006794SoilMGRIVFAAAMSHVLDPDYYERVCGAVGRRKTDEAMAAIAAMGERFSATGADALVVVADDHLNAFSFNCVPAISLRIGR
Ga0066660_1033738313300006800SoilMGRIVFAAAMSHVLDPDYYERVCGAVGRRKTDEAMAAIAAMGERFSATGADALVVVA
Ga0079220_1138081613300006806Agricultural SoilMGRIVFAGAMSHVLDPDYYQRACGDQGRRTVVACMAEIARMGERFSATRADALIVVADDHLNAFSFNAVPALCVRIG
Ga0075428_10127942613300006844Populus RhizosphereMGKLVFAGAMSHVLDPDYYDRACGAIGRQKVEAAMSEIAAMGERFAATNADALVVVADDH
Ga0075421_10056379023300006845Populus RhizosphereMGKIVFGGAMSHVLDPDYYQAACGDVGRQKVTAAMDAIRTMGDRFVEKRADALIVVADDHMNAFSFNCVPAICV
Ga0075421_10163179113300006845Populus RhizosphereMGKLVFAGAMSHVLDPDYYDRACGAIGRQKVEAAMSEIAAMGERFAATNADALVVVADD
Ga0075421_10215839823300006845Populus RhizosphereMGQIVAAAAMSHVLDPQYYQDACGTSGRRKVEACMEEIRTIGARFVQKRPDALIVVADDHLNAFSFNA
Ga0075431_10044676113300006847Populus RhizosphereMGKIVFAGAMSHVLDPDYYQRACGDEGRRMVTDCMTEIARMGERFSATRADALIVVADDHLNAF
Ga0075433_1124525113300006852Populus RhizosphereMSHVLDPEYYDRACGAVGRQTVEAVMAEIARMGERLSARKPDALIVVAD
Ga0068865_10174978723300006881Miscanthus RhizosphereMGQIVFAGAMSHVLDPDYYDRACGAAGRQKVTECMTEIARMGERLTAARPDALIVVADDHLNAF
Ga0068865_10180105523300006881Miscanthus RhizosphereMGRIVFGGAMSHVLDPDYYERACGALGRQTVVAVMAEIARMGERLSARQPDALIVVA
Ga0079215_1128622923300006894Agricultural SoilMGKIVFAGAMSHVLDPEYYQAACGDVGRQKVTAAMEAIAHMGDRFVEQKADALIVVADDHMNA
Ga0075426_1119091323300006903Populus RhizosphereMGKIVFAGAMSHVLDPEYYDHACGAVGRQKVEAAMAEIARMGERFSATKADALIVVADDHLN
Ga0075419_1023517713300006969Populus RhizosphereMGRIVAAAMSHVLDPDYYERVCGAEGRRKTEEAMTAIAAMGERFSATRADALIVVADDHLNAF
Ga0066710_10116796413300009012Grasslands SoilMGKIVFGGAMSHVLDPEYYQAACGDLGLQKVTATMDAIAHMGERFVEKKADALIVVADDHMNAFSFNCVPAICVR
Ga0099829_1072684613300009038Vadose Zone SoilMGKIVFAGAMSHVLDPDYYERACGAVGRQTVEAVMAEIAKMGERFSAQRPHALIVVADDHLNAFSFNA
Ga0099830_1073376823300009088Vadose Zone SoilMGKIVFAGAMSHVLDPDYYERACGAVGRRTVEAVMAEIAKMGERFSAKKADALIVVADDHLNAFSF
Ga0111539_1009396613300009094Populus RhizosphereMGKLVFAGAMSHVLDPDYYDKACGALGRKTVTECMAQIAQMGERFSATGADALI
Ga0111539_1142027313300009094Populus RhizosphereMGAIVFAGAMSHVLDPDYYDRACGAIGRQKVEAAMAEIAAMGARFAATGADALVVVADDHLNAFSFNCVP
Ga0075418_1106192533300009100Populus RhizosphereMGKLVFAGAMSHVLDPDYYDRACGAIGRQKVEAAMSEIAAMGERFAATNADALVVVADDHLNAFSF
Ga0066709_10383712433300009137Grasslands SoilMGKIVFAGAMSHVLDPRYYQEACGMSGRRKVEACMAEIRTMGDSLLARRPDALVVVADDHINAFSFNA
Ga0114945_1002462723300009444Thermal SpringsMGKIVFAAAMSHVLDPDYYEAACGLSGRRKVEACMAEIRKLGDALLGRRPDALIVVADDHLNAFSFTW*
Ga0114945_1013122933300009444Thermal SpringsMGKIVFAAAMSHVLDPDYYEAACGLTGRRTVEACMAEIRKLGESFLARRPDALIVVADDHLNAFSFNAVP
Ga0105249_1283182813300009553Switchgrass RhizosphereMGKLVFAGAMSHVLDPDYYDKACGALGRKTVTECMAQIAQMGERFSATGADALIV
Ga0105059_103568123300009795Groundwater SandMGRIVFAAAMSHVLDPDYYQAACGDIGRQKVTAAMDAIATMGDRFVEKKADALIVVADDHMNAFSFNCVPAICVRIG
Ga0105089_105011223300009809Groundwater SandMGRIVFAGAMSHVLDPEYYQAACGDVGRQTVTAAMEAIARMGERFVARKAEALIVVADDHLNAFSFTCVPAICIRI
Ga0105085_101011333300009820Groundwater SandMGKLVFAGAMSHVLDPDYYQRACGAEGRHKVTLCMSEIARMGERLQAARADALIVVADDHLNAFSFNAVPALCVRIGR
Ga0134070_1026767623300010301Grasslands SoilMGKIVFAGAMSHVLDPEYYDRACGAVGRQTVEAVMAEIARMGERLSARKPDALIVVAD
Ga0134082_1001944613300010303Grasslands SoilMGKIVFAAAMSHVLDPDYYQAACGLSGRRKVEACMAESEKLGDSFLARRPDALIVVADDHLNAFSFNAV
Ga0134109_1006126813300010320Grasslands SoilMGKIVFAGAMSHVLDPDYYDAACGPVGRRKVEDVMEAIRQMGARLAARSPDALIVVADDH
Ga0134109_1010484523300010320Grasslands SoilMGRIVFAAAMSHVLDPDYYQAACGLTGRRKVEACMAEIRKFGDTFLARRPDALIVVADDHLNAFSF
Ga0134080_1001668413300010333Grasslands SoilMGKIVFAAAMSHVLDPDYYQAACGLTGRRKVEACMAEIEKLGETFLARRPDALIVVADDHLNAF
Ga0134080_1010447723300010333Grasslands SoilMGRIVFAAAMSHVLDPDYYERVCGAVGRRKTDEAMAAIAAMGERFSATGADALAH
Ga0126370_1206834013300010358Tropical Forest SoilMGKIVFGGAMSHVLDPEYYQAACGDLGRRKVTEAMEAIARMGDRFVERKPDALIVVADDHMNAFSFNCV
Ga0126376_1322454723300010359Tropical Forest SoilMGKIVFAGAMSHVLDPDYYDHACGAVGRQKVEAAMVEIARMGERFSATKADALIVVADDHLNAFSFNCVP
Ga0126372_1295555223300010360Tropical Forest SoilMGRIVFAGAMSHVLDPDYYERACGAEGRQKVVAAMAEIAAMGARGSAAKPDALIVVADDHLNAFSFNCVPAMCVRIG
Ga0126377_1145066213300010362Tropical Forest SoilMGKIVFAGAMSHVLDPDYYQRACGDEGRQKVTACMAEIARMGERCTAARPDALIVVADDHLNAFS
Ga0126379_1301828113300010366Tropical Forest SoilMGKIVFGGAMSHVLDPEYYQAACGDLGRRKVTEAMEAIARMGDRFVERKPDALIVVADDHMNAFSFNC
Ga0137393_1148528413300011271Vadose Zone SoilMGKIVFAGAMSHVLDPDYYQRACGDEGRRMVTDCMTEIARMGERFSATGADALIVVADDHLNAFS
Ga0137326_112933613300011417SoilMGQIVFAGAMSHVLDPDYYDRACGAAGRQKVTECMAEIARMGERLTAARPDALIVVADDHLNAFSFNAVPAICV
Ga0137464_111538313300011434SoilMGQIVFAGAMSHVLDPDYYDRACGAAGRQKVTECMAEIARMGERLTAARPDALIVVADDH
Ga0137364_1023062633300012198Vadose Zone SoilMGKIVFAGAMSHVLDPEYYQRVCGDVGRQKTEEAMAAIAKMGERFSATKADALIVVADDHLNAFSF
Ga0137399_1011907533300012203Vadose Zone SoilMGKIVFAGAMSHVLDPDYYDHACGAVGRQKVEAAMVEIARMGERFSATKADALIVVADDHLNAFSFNCVPAMC
Ga0137399_1020243413300012203Vadose Zone SoilMGKIVFAGAMSHVLVPEYYDRACGAVGRQTVEAVMAEIARMGERLSARKPDALIVVADDHLNAF
Ga0137380_1063787313300012206Vadose Zone SoilMGKIVFGGAMSHVLDPEYYQAACGDLGRQKVIEAMDAIAGMGDRLVERKPDALIVVADDHMNAFSFNCVPAICV
Ga0137381_1012341313300012207Vadose Zone SoilMGKMVFAGAMSHVLDPDYYDAACGPVGRRKVEDVMEAIRQMGARLAARSPDALIVVADDHLNAFSFNAVPA
Ga0137381_1142435713300012207Vadose Zone SoilMGAIVFAGAMSHVLDPEYYHAACGPIGREMVEAVMKEIRHMGARMAAAGPDALIVIADDHLNAFSF
Ga0137376_1036969933300012208Vadose Zone SoilMGKIVFAGAMSHVLDPDYYQRACGDEGRLMVTDCMTEIARMGERFSATRADALI
Ga0137385_1037919823300012359Vadose Zone SoilMGKMVFAGAMSHVLDPDYYDAACGPVGRRKVEDVMEAIRQMGARRAARSPDALIVVADDH
Ga0134046_123301113300012386Grasslands SoilMGKIVFAAAMSHVLDPDYYQAACGLTGRRKVEACMAEIEKLGETFLPRRPDALIVVADDHLNAFSFNAVPAI
Ga0137394_1086077513300012922Vadose Zone SoilMGRLVFAGAMSHVLDPDYYDRACGAIGRQKVVAAMAEIAGMGERLSAQEPHALIVVADDHLNAFSFNCVPAM
Ga0137416_1022903913300012927Vadose Zone SoilMGKIVFAGAMSHVLDPDYYDHACGAVGRQKVEAAMVEIARMGERFSATKADALIVVADDHLNAFS
Ga0137416_1047949113300012927Vadose Zone SoilMGKIVFAGAMSHVLDPDYYQRACGDEGRRKTVECMTEIARMGERFTATRPDALIVVADDHLNAFSFNAVPALCVRIGRT
Ga0137404_1108267913300012929Vadose Zone SoilMGKIVFAGAMSHVLDPEYYQAACGDVGRQKVVAAMDAIASMGDRFVEKKADALIVVADDH
Ga0153915_1290250223300012931Freshwater WetlandsMGKIVFAGAMSHVLDPDYYQRACGDEGRRTVVACMAEIARMGERFSATRADALIVVAD
Ga0153915_1303342113300012931Freshwater WetlandsMGKIVSAAAMSHVLDPDYYQDACGLSGRRKVEACMAEIRQIGDRLLAARPDALIVV
Ga0153915_1335334223300012931Freshwater WetlandsMGRIVFAGAMSHVLDPDYYQRACGDEGRRTVVACMAEIARMGERFSATRADALIVVADDHLNAFSF
Ga0126375_1173619813300012948Tropical Forest SoilMGKIVFAGAMSHVLDPDYYDHACGAVGRRMVEEVMAEIRKMGDRCVAARPDALVIVADDHLNAFSFNAVP
Ga0126375_1205595723300012948Tropical Forest SoilMGKIVFGGAMSHVLDPEYYHAACGDLGRRKVTEAMEAIARMGDRFVERKPDALIVVADD
Ga0126369_1021293813300012971Tropical Forest SoilMGKIVFGGAMSHVLDPEYYQAACGDLGRRKVTEAMEAIARMGDRFVERKPDALIVVADDHMNAFSFNCVPAFC
Ga0134087_1035973223300012977Grasslands SoilMGRIVFAGAMSHVLDPDYYDHACGAVGRQKVEAAMVEIARMGERFSATKADALIVVADDHLN
Ga0134078_1026084513300014157Grasslands SoilMGRIVFAAAMSHVLDPDYYERVCGAVGRRKTDEAMAAIAAMGERFSATGADALVVVADDHLN
Ga0075301_113075113300014262Natural And Restored WetlandsMGKIVFAGAMSHVLDPEYYQAACGDLGRQKVTAAMDAIVKMGERFVARKPDALI
Ga0134072_1039399923300015357Grasslands SoilMGRIVFAAAMSHVLDPDYYERVCGAVGRRKTDEAMAAIAAMGERFSATGADALVVVADDH
Ga0134089_1008509623300015358Grasslands SoilMGRIVFAGAMSHVLDPDYYDHACGAVGRQKVEAAMVEIARMGERFSATKADALIVVADDHLNAFSFTCVPALCVRIGR
Ga0134085_1058104113300015359Grasslands SoilMGKIVFAGAMSHVLDPDYYERACGSVGRQKVEAAMAEIARMGERCSAKNPDALIVVA
Ga0134069_119256023300017654Grasslands SoilMGRIVFAAAMSHVLDPDYYERVCGAVGRRKTDEAMAAIAAMGKRFSATGADALVVA
Ga0134112_1045578423300017656Grasslands SoilMGRIVFAAAMSHVLDPDYYERVCGAVGRRKTDEAMAAIAAMGERFSATGADALVVVADDHLNAF
Ga0134074_100409613300017657Grasslands SoilMGKIVFAAAMSHVLDPDYYQAACGLTGRRKVEACMAEIEKLGETFLARRPDALIVVADDHLNAFSFNAVPAICVRIGRH
Ga0134083_1060259313300017659Grasslands SoilMGEIVFGGAMSHVLDPDYYQAACGDLGRQKVTEAMAAIARMGDRFVERKPDALIVVADDHMNAFSFNCV
Ga0187780_1043693223300017973Tropical PeatlandMGKIVFAGAMSHVLDPDYYQRACGDEGRQKVTACMTEIARMGERFTATRPDALIVVADDH
Ga0187767_1020091513300017999Tropical PeatlandMGKIVFAGAMSHVLDPDYYQRACGDEGRQKVTACMTEIARMGERFTATRPDALIVVADDHLNAFSFNA
Ga0190265_1016710413300018422SoilMGKIVFAGAMSHVLDPDYYQRACGDDGRLKVTACMAEIAKMGERFTATRPDALI
Ga0190265_1047703333300018422SoilMGKIVFAGAMSHVLDPDYYQRACGDEGRRKTVECMTEIARMGERLTASNPDALIVVADD
Ga0190265_1225781513300018422SoilMGKIVAAAAMSHVLDPDYYQEACGMSGRRKVEACMEEIRAIGARFVAKKPDALIVVADDHLNAFS
Ga0190272_1021576213300018429SoilMGKIVFAGAMSHVLDPDYYQRACGDDGRQKVTACMAEIARMGERFTATRPDALIVVADDHLNAF
Ga0190270_1339822813300018469SoilMGKIVFAGAMSHVLDPDYYQRACGDDGRTKVTACMAEIARMGERFTATRPDALI
Ga0187893_1068830713300019487Microbial Mat On RocksMGKIVFAGAMSHVLDPDYYQRACGDEGRRKTVECMTEIARMGERLTAARPDALIVVADDHLNAFS
Ga0184649_155739913300020068Groundwater SedimentMGRLVFAGAMSHVLDPDYYDRACGALGRQKVVAAMAEIARMGERLSAQQPHALIVVADDHLNAFS
Ga0210406_1070017823300021168SoilMGKIVFAGAMSHVLDPDYYQRACGDEGRRMVTDCMTEIARMGERFSATRADALIVVADDHLNA
Ga0126371_1330470413300021560Tropical Forest SoilMGQIVFGGAMSHVLDPEYYQAACGDLGRKKVTEAMEAIARMGDRFVERKPDALIVVADDHMNAF
Ga0126371_1344524313300021560Tropical Forest SoilMGEIVFGGAMSHVLDPEYYQAACGDLGRQKVTAAMEAIARMGDRFVARKPDALIVVADDHMNAF
Ga0224452_104323233300022534Groundwater SedimentMGKIVFAGAMSHVLDPDYYQRACGDDGRRKVTACMAEIARMGERFTATRPDALIVVA
Ga0212128_1000395093300022563Thermal SpringsMGKIVFAAAMSHVLDPDYYEAACGLSGRRKVEACMAEIRKLGDALLGRRPDALIVVADDHLNAFSFTW
Ga0212128_1054399823300022563Thermal SpringsMGKIVFAAAMSHVLDPQYYQDACGLSGRRKVEACMAEILTMGDRFLARRPDALIVVADDHINAFSFNAVPAMCV
Ga0222622_1026341513300022756Groundwater SedimentMGKIVFAGAMSHVLDPDYYQRACGDDGRRKVTACMAEIARMGERFTATRPDALIVVADDHLNAFSFNAVP
Ga0209640_1022026553300025324SoilMGKLVFGGAMSHVLDPEYYQAACGDVGRHTVTAAMDAIAKMGDRFVEKKADALIVVADDHMNGPSLP
Ga0210132_101414413300025538Natural And Restored WetlandsMGKIVFAGAMSHVLDPDYYQRACGDEGRRKTVECMTEIARMGERFTATRPDALIVVADD
Ga0210108_105811023300025560Natural And Restored WetlandsMGKIVFAGAMSHVLDPDYYQRACGDEGRRKTVECMTEIARMGERFTATRPDALIVVADDHLNAFSFNAVPALCVRI
Ga0207653_1002367913300025885Corn, Switchgrass And Miscanthus RhizosphereMGKIVFAGAMSHVLDPDYYQRACGDEGRRMVTDCMTEIARMGERFSATRADALIVVADDHLNAFSF
Ga0207653_1002766233300025885Corn, Switchgrass And Miscanthus RhizosphereMGQIVFAGAMSHVLDPDYYDRACGAAGRQKVTECMTEIARMGERLTIARPDALIVVA
Ga0207684_1041642433300025910Corn, Switchgrass And Miscanthus RhizosphereMGKIVFAGAMSHVLDPDYYQRACGDEGRRMVTDCMTEIARMGERFSATRADALIVVADDHLNAFS
Ga0207646_1077338813300025922Corn, Switchgrass And Miscanthus RhizosphereMGQIVFAGAMSHVLDPDYYDRACGAAGRQKVTECMTEIARMGERLTIARPDALIVVADDHLNAFSFNAVPAIC
Ga0207704_1157650813300025938Miscanthus RhizosphereMGRIVFGGAMSHVLDPDYYERACGALGRQTVVAVMAEIARMGERLSARQPDALIVVADDH
Ga0207712_1173604123300025961Switchgrass RhizosphereMGKLVFAGAMSHVLDPDYYDRACGALGRKTVTECMAQIAQMGERFSATGADALIV
Ga0207648_1107426023300026089Miscanthus RhizosphereMGQIVFAGAMSHVLDPDYYDRACGAAGRQKVTECMTEIARMGERLTIARPDALIVV
Ga0207676_1228985813300026095Switchgrass RhizosphereMGQIVFAGAMSHVLDPDYYDRACGAAGRQKVTECMAEIARMGERLTAARPDALIVVADDHLNAFSFNA
Ga0209235_105974233300026296Grasslands SoilMGKIVFAGAMSHVLDPEYYDRACGAVGRQTVEAVMAEIARMGERLSARKPDALIVVADDHLNA
Ga0209240_125968223300026304Grasslands SoilMGKIVFAGAMSHVLDPDYYQRACGDEGRRMVTDCMTEIARMGERFSATRADALIVVADDHLNAFSFNAVPALCV
Ga0209239_119576913300026310Grasslands SoilMGKIVFAAAMSHVLDPEYYEAACGLSGRRKVEACMAEIGKLGDTFLARRPDALIVVADDHLNAFSFNAVP
Ga0209152_1010488233300026325SoilMGRIVFAAAMSHVLDPDYYERVCGAVGRRKTDEAMAAIAAMGERFSATGADALVVVADDHLNAFSF
Ga0209801_113370013300026326SoilMGRIVFAAAMSHVLDPDYYERVCGAVGRRKTDEAMAAVAAMGERFSATGADALVVVADDHLNAFSFNCVP
Ga0209267_119954313300026331SoilMGKIVFAGAMSHVLDPDYYDHACGAVGRQKVEAAMVEIARMGERFSATKADALIVVA
Ga0209156_1015607723300026547SoilMGRIVFAGAMSHVLDPDYYDHACGAVGRQKVEAAMVEIARMGERFSATKADALIVVA
Ga0209897_104281923300027169Groundwater SandMGQIVFAAAMSHVLDPDYYQAACGVAGRRMVEACMAEVRKLGDAFLARRPDALIVVADDHLNVFSFNAVPAICVRIG
Ga0256866_100866213300027650SoilMGKIVFAGAMSHVLDPDYYQRACGDDGRRKVTACMAEIARMGERFTATRPDALIVVADDHLNAFS
Ga0209180_1021417023300027846Vadose Zone SoilMGKIVFAGAMSHVLDPDYYERACGAVGRQTVEAVMVEIAKMGERFSAQRPHALIVVADDHLNAFSFNA
Ga0209180_1028215713300027846Vadose Zone SoilMGNIVFAGAMSHVLDPEYYDRACGAPGRQKVEAAMAEIARMGERFSATNADALIVVADDHLNAFSFNCVPA
Ga0209814_1008823143300027873Populus RhizosphereMGRIVFAGAMSHVLDPDYYERACGATGRQKVEAAMREIAAMGERLAATSADALVVVADDHLN
Ga0209590_1024834913300027882Vadose Zone SoilMGKIVFAGAMSHVLDPDYYERACGAVGRQTVEAVMAEIAKMGERFSAQRPHALIVVADDHLNAFS
Ga0209590_1059757133300027882Vadose Zone SoilMGKIVFGGAMSHVLDPEYYQAACGDIGRQKVVAAMDAIASMGDRFVEKKADALIVVADDHMNAFSFNCVPAIC
Ga0209590_1076316413300027882Vadose Zone SoilMGKIVAAAAMSHVLDPQYYQEACGLSGRRKVEACMSEVRRIGANFKARRPDALIVVADDHLNAFSF
Ga0209382_1109464723300027909Populus RhizosphereMGRIVFAGAMSHVLDPDYYERVCGAVGRRKTEETMAAIAAMGERLSAMRPDALIVVADDHLNAFSFNCVPA
Ga0268264_1240099723300028381Switchgrass RhizosphereMGQIVFAGAMSHVLDPDYYDRACGAAGRQKVTECMTEIARMGERLTAARPDALIVVADDHLNAFSFNAV
Ga0137415_1013831713300028536Vadose Zone SoilMGKIVFAGAMSHVLDPDYYQRACGDEGRRKTVECMTEIARMGERFTASKPDALIVEADDHLNAFSL
Ga0247818_1028012233300028589SoilMGKIVFAGAMSHVLDPDYYQRACGDEGRRKTVECMTEIARMGERLTAARPDALIVVADDHLNAFSFNAVPA
Ga0307312_1021259413300028828SoilMGKIVFAGAMSHVLDPDYYERACGAFGRQTVEAVMAEIAGMGERLSARKPDALIVVADDH
Ga0299907_1109008813300030006SoilMGTIVFAGAMSHVLDPDYYQEACGLSGRRKVEACMTEIRAMGERMLARRPDALIVVADDHLN
Ga0247826_1107241413300030336SoilMGKIVFGGAMSHVLDPEYYQAACGDVGRQKIVAAMEAIGRMGDRFVETKPDALIVVADDHMNAFSFNCV
(restricted) Ga0255310_1012027023300031197Sandy SoilMGKIVFAGAMSHVLDPDYYQRACGDEGRRKTVECMTEIARMGERLTATRPDALIV
Ga0299913_1009541513300031229SoilMGKIVFAGAMSHVLDPDYYQRACGDDGRRKVTACMAEIARMGERFTATRPDALIVVADDHLNA
Ga0170824_10950106823300031231Forest SoilMGEIVFGGAMSHVLDPDYYQAACGDLGRQKVVEAMDAIGKMGDRLVERKPDALIVVADDHMNAFSFNCVPAICV
(restricted) Ga0255312_100352243300031248Sandy SoilMGKIVFAGAMSHVLDPDYYQRACGDEGRRKTVECMTEIARMGERLTATRPDALIVVADDHLNAFSF
Ga0307469_1102299813300031720Hardwood Forest SoilMGKIVFAGAMSHVLDPDYYQRACGDEGRRMVTDCMTEIARMGERFSATGADALIVVADDHLNAFSFNA
Ga0307468_10000452583300031740Hardwood Forest SoilMGEIVFGGAMSHVLDPDYYQAACGDLGRQKVVEAMDAIGKMGDRLVERKPDALIVVADDHMNAFSFNCVP
Ga0307468_10063667823300031740Hardwood Forest SoilMGKIVFAGAMSHVLDPDYYQRACGDEGRRKTVECMTEIARMGERFTATRPDALI
Ga0318495_1001403313300031860SoilMGQIAFGGAMSHVLDPEYYQAACGDLGRQKVTEAMEAIARMGDRLVERKPDALIVVADDHMN
Ga0310912_1012796513300031941SoilMGQIAFGGAMSHVLDPEYYQAACGDLGRQKVTEAMEAIARMGDRLVERKPDALIVV
Ga0310916_1084371913300031942SoilMGQIAFGGAMSHVLDPEYYQAACGDLGRQKVTEAMEAIARMGDRLVERKPDALIVVADDHMNAFSFNCV
Ga0307414_1216218623300032004RhizosphereMGQIVFGGAMSHVLDPDYYDRACGALGRQSVLAAMAEIARMGERLSAKNPDALIVV
Ga0318562_1008201013300032008SoilMGQIAFGGAMSHVLDPEYYQAACGDLGRQKVTEAMEAIARMGDRLVERKPDALIVVADDHMNAFSFNCVPAFCVRIG
Ga0318563_1024279113300032009SoilMGQIAFGGAMSHVLDPEYYQAACGDLGRQKVTEAMEAIARMGDRLVERKPDALIVVADDH
Ga0310906_1067251613300032013SoilMGRIVFGGAMSHVLDPDYYDRACGAIGRQMVNDTMAEIGKMGERFSATQADALIVVADDHLNAFSFNCVPAFCVRI
Ga0307470_1126558123300032174Hardwood Forest SoilMGKIVFAGAMSHVLDPDYYQRACGDEGRRMVTDCMSEIARMGERFSATRADALIVV
Ga0307472_10150248123300032205Hardwood Forest SoilMGRIVFAGAMSHVLDPDYYDHACGAVGRRMVEEVMREIRSMGDRCVAARPDALIIVADDHLNAFSFNAVPA
Ga0307472_10176431923300032205Hardwood Forest SoilMGKLVFAGAMSHVLDPDYYDKACGALGRKTVTECMAQIAQMGERFSATGAEALIVVADDHLNAFSFNAVPAMC
Ga0364946_064724_557_7753300033815SedimentMGRLVFAGAMSHVLDPDYYDRACGALGRQKVVAAMAEIARMGERLSAQQPHALIVVADDHLNAFSFNCVPAMC
Ga0373959_0151014_3_1793300034820Rhizosphere SoilMGKIVFAGAMSHVLDPDYYQRACGDEGRRMVTDCMTEIARMGERFSATRADALIVVADD


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.