Metagenome / Metatranscriptome Family F029820

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Overview

Basic Information
Family ID	F029820
Family Type	Metagenome / Metatranscriptome
Number of Sequences	187
Average Sequence Length	51 residues
Representative Sequence	VHARILAGVGAWLLGAGAATAGSLLAVSLLGQGIAASPGQQLTANAVNQAL
Number of Associated Samples	116
Number of Associated Scaffolds	187

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	69.40 %
% of genes near scaffold ends (potentially truncated)	71.66 %
% of genes from short scaffolds (< 2000 bps)	65.24 %
Associated GOLD sequencing projects	111
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (66.310 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (71.658 % of family members)
Environment Ontology (ENVO)	Unclassified (73.797 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (73.797 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80. 1JGIcombinedJ51221_100509513 2Ga0066672_108090501 3Ga0070734_109053152 4Ga0070733_102113133 5Ga0066661_101313261 6Ga0066905_1004245203 7Ga0075275_10656791 8Ga0070766_110512902 9Ga0070766_112823491 10Ga0075028_1005377961 11Ga0070765_1001980703 12Ga0070765_1003028573 13Ga0079221_117706402 14Ga0116214_12344591 15Ga0116216_108902901 16Ga0116223_108113582 17Ga0126380_119791632 18Ga0126382_117739172 19Ga0126381_1012488863 20Ga0126381_1013540842 21Ga0136449_1017012122 22Ga0137384_103484053 23Ga0137390_112455882 24Ga0137416_120190621 25Ga0126369_125895921 26Ga0126369_136767192 27Ga0182041_122175581 28Ga0182035_108942361 29Ga0187808_103172381 30Ga0210386_108909911 31Ga0210394_102560763 32Ga0207700_107860952 33Ga0207788_10224381 34Ga0207762_10526202 35Ga0207777_10703311 36Ga0209040_103633101 37Ga0209060_104617301 38Ga0209380_107066441 39Ga0209380_107873582 40Ga0209415_110630241 41Ga0209698_105899462 42Ga0137415_112925781 43Ga0222749_105841372 44Ga0310038_103248512 45Ga0318516_100510541 46Ga0318516_101381723 47Ga0318516_108442872 48Ga0318534_105168762 49Ga0318534_105843052 50Ga0318534_106250532 51Ga0318534_107442071 52Ga0318541_101102423 53Ga0318573_103804091 54Ga0318573_106411441 55Ga0318515_100271421 56Ga0318515_100621313 57Ga0318515_100633251 58Ga0318515_102794731 59Ga0318515_102822802 60Ga0310915_103342193 61Ga0318555_100482473 62Ga0318555_104015631 63Ga0318542_103669331 64Ga0318561_107235581 65Ga0318574_101062693 66Ga0318574_102086173 67Ga0318560_107267162 68Ga0318496_100529183 69Ga0318496_100580633 70Ga0318496_100935511 71Ga0318496_101242003 72Ga0318496_101249173 73Ga0318496_102238261 74Ga0318496_106167801 75Ga0318496_108341132 76Ga0307476_107618892 77Ga0318493_100695973 78Ga0318493_102438461 79Ga0318493_102662751 80Ga0318493_106405901 81Ga0318500_106163701 82Ga0318501_100957751 83Ga0318501_106947211 84Ga0318501_108030662 85Ga0306918_111948492 86Ga0318502_100109321 87Ga0318502_100512193 88Ga0318502_102391143 89Ga0318502_108855971 90Ga0318502_110298142 91Ga0318492_103353101 92Ga0318492_104147151 93Ga0318537_102911941 94Ga0318554_105602712 95Ga0318526_101636082 96Ga0318526_103203152 97Ga0318521_101235821 98Ga0318521_104818031 99Ga0318546_100981601 100Ga0318546_111755261 101Ga0318546_112557842 102Ga0318543_104065632 103Ga0318498_101243123 104Ga0318566_100712081 105Ga0318566_101178761 106Ga0318566_104213492 107Ga0318547_103870571 108Ga0318552_100236324 109Ga0318552_102406031 110Ga0318552_102768082 111Ga0318552_104441871 112Ga0318529_101637393 113Ga0318529_103301371 114Ga0318548_106503332 115Ga0318576_102072092 116Ga0318550_105035871 117Ga0318550_105764171 118Ga0318523_102096661 119Ga0318523_105648041 120Ga0318565_100292211 121Ga0318565_100437281 122Ga0318497_101536511 123Ga0318497_101908551 124Ga0318567_104750451 125Ga0318564_100774071 126Ga0318564_101489621 127Ga0318511_101236071 128Ga0318511_104192721 129Ga0318512_100910371 130Ga0318512_105732051 131Ga0318527_103553542 132Ga0318495_100826023 133Ga0318495_101732771 134Ga0318495_104393041 135Ga0318495_105080322 136Ga0318544_104287941 137Ga0306925_102542911 138Ga0318551_100938611 139Ga0318551_101130313 140Ga0318551_101596383 141Ga0318551_107157072 142Ga0318520_107608741 143Ga0310916_102889101 144Ga0306926_100451636 145Ga0318530_104044021 146Ga0307479_106224652 147Ga0306922_104119213 148Ga0318562_106861731 149Ga0318563_101223291 150Ga0318569_101036721 151Ga0318569_104178932 152Ga0318507_101866752 153Ga0310911_105384101 154Ga0310911_106507122 155Ga0318559_100614741 156Ga0318549_100467161 157Ga0318558_104045432 158Ga0318558_105211581 159Ga0318558_105604931 160Ga0318506_100790011 161Ga0318570_101794072 162Ga0318570_102661842 163Ga0318533_110861741 164Ga0318510_102983932 165Ga0318524_100803121 166Ga0318524_102997001 167Ga0318524_107939122 168Ga0318553_100811813 169Ga0318553_105025842 170Ga0318553_107245331 171Ga0318553_107508942 172Ga0306924_123993972 173Ga0318525_100395731 174Ga0318525_102286591 175Ga0318518_101046741 176Ga0318518_106175392 177Ga0318577_104427022 178Ga0318540_105047741 179Ga0318540_106363912 180Ga0307470_110548992 181Ga0307471_1006941103 182Ga0335078_111378341 183Ga0335081_102668033 184Ga0335077_115886481 185Ga0310914_115159771 186Ga0318519_101338811 187Ga0318519_105689971
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80. 1JGIcombinedJ51221_100509513 2Ga0066672_108090501 3Ga0070734_109053152 4Ga0066661_101313261 5Ga0066905_1004245203 6Ga0075275_10656791 7Ga0070766_112823491 8Ga0070765_1001980703 9Ga0070765_1003028573 10Ga0116223_108113582 11Ga0126380_119791632 12Ga0126381_1012488863 13Ga0126381_1013540842 14Ga0136449_1017012122 15Ga0137390_112455882 16Ga0137416_120190621 17Ga0126369_136767192 18Ga0182041_122175581 19Ga0210386_108909911 20Ga0207788_10224381 21Ga0207777_10703311 22Ga0209040_103633101 23Ga0209415_110630241 24Ga0318534_107442071 25Ga0318573_106411441 26Ga0318515_100633251 27Ga0318555_100482473 28Ga0318496_100529183 29Ga0318496_108341132 30Ga0318493_100695973 31Ga0318502_108855971 32Ga0318526_101636082 33Ga0318546_112557842 34Ga0318566_101178761 35Ga0318552_100236324 36Ga0318552_102406031 37Ga0318529_101637393 38Ga0318569_104178932 39Ga0335077_115886481
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50. 1Ga0318569_101036721 2JGIcombinedJ51221_100509513 3Ga0070734_109053152 4Ga0066905_1004245203 5Ga0075275_10656791 6Ga0070766_110512902 7Ga0070765_1001980703 8Ga0070765_1003028573 9Ga0116216_108902901 10Ga0116223_108113582 11Ga0126381_1013540842 12Ga0136449_1017012122 13Ga0187808_103172381 14Ga0210386_108909911 15Ga0210394_102560763 16Ga0209040_103633101 17Ga0209060_104617301 18Ga0209415_110630241 19Ga0137415_112925781 20Ga0318534_107442071 21Ga0318573_106411441 22Ga0318515_102822802 23Ga0318496_100529183 24Ga0318496_101249173 25Ga0318496_106167801 26Ga0318493_100695973 27Ga0318502_100109321 28Ga0318492_103353101 29Ga0318521_101235821 30Ga0318546_111755261 31Ga0318566_104213492 32Ga0318576_102072092 33Ga0318523_102096661 34Ga0318497_101536511 35Ga0318564_101489621 36Ga0318495_101732771 37Ga0307479_106224652 38Ga0306922_104119213 39Ga0318563_101223291 40Ga0318569_104178932 41Ga0318549_100467161 42Ga0318553_105025842 43Ga0335081_102668033 44Ga0318519_101338811
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 55.70% β-sheet: 0.00% Coil/Unstructured: 44.30%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.50
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.50
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 187 Family Scaffolds
PF00072	Response_reg	52.94
PF00486	Trans_reg_C	37.97
PF00672	HAMP	5.88
PF02518	HATPase_c	2.67

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	33.69 %
Unclassified	root	N/A	66.31 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	33.69 %
Unclassified	root	N/A	66.31 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	33.69 %
Unclassified	root	N/A	66.31 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.53 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	32.09 %
Unclassified	root	N/A	66.31 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	32.09 %
Unclassified	root	N/A	66.31 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.53 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	19.79 %
Unclassified	root	N/A	66.31 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.53 %

Name	Rank	Taxonomy	Distribution
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.53 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	8.56 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.53 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1.07 %
Unclassified	root	N/A	66.31 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.53 %

Name	Rank	Taxonomy	Distribution
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.53 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	8.56 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.53 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1.07 %
Unclassified	root	N/A	66.31 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.53 %

Name	Rank	Taxonomy	Distribution
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.53 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	2.14 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.53 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1.07 %
Unclassified	root	N/A	66.31 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.53 %

Visualization
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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003505\|JGIcombinedJ51221_10050951	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1573	Open in IMG/M
3300005167\|Ga0066672_10809050	Not Available	589	Open in IMG/M
3300005541\|Ga0070733_10211313	All Organisms → cellular organisms → Bacteria	1271	Open in IMG/M
3300005713\|Ga0066905_100424520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1085	Open in IMG/M
3300005892\|Ga0075275_1065679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	598	Open in IMG/M
3300005921\|Ga0070766_11051290	Not Available	561	Open in IMG/M
3300006176\|Ga0070765_100198070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1821	Open in IMG/M
3300006176\|Ga0070765_100302857	All Organisms → cellular organisms → Bacteria	1478	Open in IMG/M
3300006804\|Ga0079221_11770640	Not Available	505	Open in IMG/M
3300009520\|Ga0116214_1234459	Not Available	695	Open in IMG/M

Showing 1 to 10 of 134 entries

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	2.14%
Terrestrial	Environmental → Terrestrial	97.86%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	1.07%
Sediment	Environmental → Aquatic → Sediment	1.07%
Soil	Environmental → Terrestrial → Soil	97.86%

Habitat	Taxonomy	Distribution
Loam	Environmental → Terrestrial → Soil → Loam	6.42%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	89.30%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.07%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.14%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.07%

Habitat	Taxonomy	Distribution
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.53%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.53%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.53%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	77.54%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.88%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.07%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.53%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.16%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.14%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.07%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.53%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.53%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.53%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.53%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.53%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.14%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.21%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	71.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.74%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.21%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.07%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.60%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.21%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.14%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.14%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.07%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005892	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_80N_305	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M

Showing 1 to 10 of 116 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ51221_100509513	3300003505	Forest Soil	MGVGAWLLGVGTATAGSLLAVSLLGQGIAPSASQQLSPDAVIRALSVE
Ga0066672_108090501	3300005167	Soil	MRILAGVGAWLFGAGTATAGSLLAVSLLGQGIAASPSQQLTGAAVNRALARESRNPG
Ga0070734_109053152	3300005533	Surface Soil	MHRRILFGVAAWLLGAATATAGSLLAVSLLGQGITGGTGTLLSQASVNRALAREA
Ga0070733_102113133	3300005541	Surface Soil	MRIAVGVGAWLLGVGAATGGSLLAVSLLGQGIAASNSQQLTAAAVTRALAAESTEP
Ga0066661_101313261	3300005554	Soil	MRILAGVGAWLFGAGTATAGSLLAVSLLGQGIAASPS
Ga0066905_1004245203	3300005713	Tropical Forest Soil	VSLGRVSARFLAGVGAWLLGAGAATGGSLLAVSALGQGLAPAPSQQLTVTAVNDALASEK
Ga0075275_10656791	3300005892	Rice Paddy Soil	VSLGRVHTRILIVGAWLLGVSTATVGSLWAVSELGQGIIGQSSQQLTVAAVNRALASEAADPPGAPP
Ga0070766_110512902	3300005921	Soil	VSLGRVQARFLVGVGAWLLGAGTATGGSLLAVSLLGQGLAPAPSQQLTVAAVNRAL
Ga0070766_112823491	3300005921	Soil	MRVLAGVGAWLVGVGAATAGSLLAVSLLGQGIATGTSQQLTA
Ga0075028_1005377961	3300006050	Watersheds	MRILAGVGAWLLGAGTATAGSLLAVSLLGQGIADSP
Ga0070765_1001980703	3300006176	Soil	MGVGAWLVGVGAATAGSLVAVSLLGQGIAPSTSQQLSSVAVNQALAVEATESTGPPLSSPSPA
Ga0070765_1003028573	3300006176	Soil	MGVGAWLLGVGTATAGSLLAVSLLGQGIAASNSQQLTPAAVARALASEASDPSDPS
Ga0079221_117706402	3300006804	Agricultural Soil	MRILAGVGAWLFGAGTATAGSLLAVSLLGQGIAASPSQQLTGAAVNRALAGEARS
Ga0116214_12344591	3300009520	Peatlands Soil	MRILAGVGAWLLGAGTATAGSLLAVSLLGQGIADSPGQQLTTAAVKSALAAE
Ga0116216_108902901	3300009698	Peatlands Soil	VHRRILFGVVAWLLGAATATAGSLLAVSLLGQGITGNSGQLLTQDAVARAL
Ga0116223_108113582	3300009839	Peatlands Soil	MRIAVGVGAWLLGVGAATGGSLLAVSLLGQGIATNNTQQLTAAAVTRALASESSEAPS
Ga0126380_119791632	3300010043	Tropical Forest Soil	MRKRVFIGVGAWVVGAGVATGGSLLAVSLLGQGIASSPSEQLSGSAVNNGLASGTSATPA
Ga0126382_117739172	3300010047	Tropical Forest Soil	MRIVAGVGAWLLGAGTATAGSLLAVSLLGQGIADSPGQQLTEAAVNQALAREASQT
Ga0126381_1012488863	3300010376	Tropical Forest Soil	MRVAAGVGAWLLGVGAATAGSLLAVSLLGQGIATSTNQQLTESAVQRALAEA
Ga0126381_1013540842	3300010376	Tropical Forest Soil	VHVRILAGVGAWLLGAATATAGSLLAVSLLGQGIAVSPGQQLTADAVNRTLAREA
Ga0136449_1017012122	3300010379	Peatlands Soil	MIPVPTRVLLGIGAWLVGVGAATGGSLAAVSLIGQSIAGTPTQQLTVSAVNHALASGGRD
Ga0137384_103484053	3300012357	Vadose Zone Soil	MRKRVFIGVSAWVVGAGVATGGSLLAVSLLGQGIAASPNEQLSGAAVNNALASGGSGTPT
Ga0137390_112455882	3300012363	Vadose Zone Soil	VQARFLVGVGAWLLGAGAATGGSLLAVSLLGQGLAPAPSQQLTVAAVNRALASEAAEPTQSPSP
Ga0137416_120190621	3300012927	Vadose Zone Soil	VACAILGRVPVRILVGFGAWLLGVGAATAGSLLAVSLLGQGIADSPGQQLTAAAVNQA
Ga0126369_125895921	3300012971	Tropical Forest Soil	VHVRILAGVGAWLLGAGTATAGSLLAVSLLGQGIADSPGQQL
Ga0126369_136767192	3300012971	Tropical Forest Soil	VRFLAGVGAWLLGAGAATAGSLLAVSALGQGLAPAPSQQLTVAAVN
Ga0182041_122175581	3300016294	Soil	MHGRIIFGVIAWLLGAATATAGSLLAVSLLGQGIT
Ga0182035_108942361	3300016341	Soil	MAGVGAWLLGVGTATAGSLLAVSLLGQGIAASPGQ
Ga0187808_103172381	3300017942	Freshwater Sediment	MRIAVGVGAWLLGVGAATGGSLLAVSLLGQGIAAGNSQQLTPAAVSRALASEVSESTPSSQRIAS
Ga0210386_108909911	3300021406	Soil	VNRRILFGLAAWLLGAATATAGSLLAVSLLGQGITGASGPLLTQDAVNRTL
Ga0210394_102560763	3300021420	Soil	MRILAGVGAWLFGAGTATAGSLLAVSLLGQGIAASPSQQLTGAAVNRALARESRYP
Ga0207700_107860952	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VSARFLVGVGAWLLGAGAATGGSLLAVSLLGRGIIAPAAGQQLTVAAVNRALASEAA
Ga0207788_10224381	3300026898	Tropical Forest Soil	MGVGAWLLGVGAATAGSLLAVSLLGQGIAPATSQQ
Ga0207762_10526202	3300027063	Tropical Forest Soil	MGVGAWLLGVGAATAGSLLAVSLLGQGIAPATSQQVSPATVTQALANETD
Ga0207777_10703311	3300027330	Tropical Forest Soil	MGVGAWLLGVGAATAGSLLAVSLLGQGIAPATSQQVSPATVTQALANETDEPAPQTASLP
Ga0209040_103633101	3300027824	Bog Forest Soil	VILGKVHMRILAGVGAWLLGAGTATAGSLLAVSLLGQGIAESQGQQLTVAAVKSALAREAQE
Ga0209060_104617301	3300027826	Surface Soil	MRVLAGVGAWMLGVGAATAGSLLAISLLGQGIATSTSQQLTTAAVNRALA
Ga0209380_107066441	3300027889	Soil	VHIRILAGVGAWLLGVGTATAGSLLAVSLLGQGIA
Ga0209380_107873582	3300027889	Soil	MRVLAGVGAWLVGVGAATAGSLLAVSLLGQGIATGTSQQLTAADVNRALAAE
Ga0209415_110630241	3300027905	Peatlands Soil	MAPVQARIALAMGAWLLGAGAATGGSLVAVSLLGQSLAAPPTQQLTVAAVNRALA
Ga0209698_105899462	3300027911	Watersheds	MRVLAGVGAWLLGVGAATAGSLLAVSLLGQGIAASTSHQLTSAAVN
Ga0137415_112925781	3300028536	Vadose Zone Soil	VPVRILVGFGAWLLGVGAATAGSLLAVSLLGQGIADSPGQQLTAAAVNQALARE
Ga0222749_105841372	3300029636	Soil	MRILAGVGAWLFGAGTATAGSLLAVSLLGQGIAASPSQQLTGAAVNRAL
Ga0310038_103248512	3300030707	Peatlands Soil	MRILAGVGAWLLGAGTATAGSLLAVSLLGQGIADSPGQQLTTAAV
Ga0318516_100510541	3300031543	Soil	VSLSGVSARYLVGVGAWLLGAAVATGGSLFAVSLLGQSLAPAPSQQLTETAVNHALASEAAEG
Ga0318516_101381723	3300031543	Soil	MRIVAGLGAWLLGAGTATAGSLLAVSLLGQGIADTQGQQ
Ga0318516_108442872	3300031543	Soil	MRVAAGVGAWLLGVGAATAGSLLAVSLLGQGIATNTSQQLTE
Ga0318534_105168762	3300031544	Soil	VTLGRVSARFLAGVGAWLLGAGAATAGSLLAVSALGQGLAPTPSQQLTVAAVNQALRSE
Ga0318534_105843052	3300031544	Soil	MSLGGVSARFLVGVGAWLLGAGAATSGSLLAVSLLGQGLAPAPSQQLTEIAVSRALASEAVK
Ga0318534_106250532	3300031544	Soil	VHARILAGVGAWLLGAGAATAGSLLAVSLLGQGIAASPGQQ
Ga0318534_107442071	3300031544	Soil	VSARFLAGVGAWLLGAVVATGGSLLAVSLLGRGIIAPAAGQQLTVAAVNRALA
Ga0318541_101102423	3300031545	Soil	MGVGAWLLGVGAATAGSLLAVWMLGQGIAPSTSQQLTAADVY
Ga0318573_103804091	3300031564	Soil	VSLGRVSARFLAGVGAWLLGAGAATGGSLLAVSALGQGLAPAPSQQLTEIAVS
Ga0318573_106411441	3300031564	Soil	MRNLCHVHMRVAAGVGAWLIGVGAATAGSLLAVSLLGQGISTSTSQQLTESAVQSALAVEASEMPGTG
Ga0318515_100271421	3300031572	Soil	VVRATLGGVHVRILAGVGAWLLGAGTATAGSLLAVSLLGQGIADNPGQQLTAAAVNQALARE
Ga0318515_100621313	3300031572	Soil	MGVGAWLLGVGAATAGSLLAVSLLGQGIAPATSQQLSAATVTQALANETNVP
Ga0318515_100633251	3300031572	Soil	MAGVGAWLLGVGTATAGSLLAVSLLGQGIAASPGQQLTADAVN
Ga0318515_102794731	3300031572	Soil	VSARFLVGVSAWLLGAGAATGGSLMAVSLLGQGIIGPPPSQQLTVGAVNRALAS
Ga0318515_102822802	3300031572	Soil	VSARFLAGVGAWLLGAAAATGGSLLAVSALGQSLAPAPSQQLTVAAVSH
Ga0310915_103342193	3300031573	Soil	MRVAAGVGAWLLGVGAATAGSLLAVSLLGQGIATSNNQQLTESAVQ
Ga0318555_100482473	3300031640	Soil	MGVGAWILGIGAATAGSLLAVSLLGQGIAPVRNQQLNAAAVNRALSAEAGETSATVVS
Ga0318555_104015631	3300031640	Soil	VSLGRVSARFLAGVGAWLLGVGAATAGSLLAVSALGQGLAPAPSQQLTVAAVNHALAIE
Ga0318542_103669331	3300031668	Soil	MSLGGVSARFLVGVGAWLLGAGAATSGSLLAVSLLGQGLAPAPSQQLTEIAVSRALASEAVKAAPSP
Ga0318561_107235581	3300031679	Soil	MSLGGVSARFLVGVGAWLLGAGAATSGSLLAVSLLGQGLAPAPSQQLTEIAVS
Ga0318574_101062693	3300031680	Soil	MRVAAGVGAWLLGVGAATAGSLLAVSLLGQGIATNTSQQLTESTVKRA
Ga0318574_102086173	3300031680	Soil	MGVGAWLLGVGAATAGSLLAVSLLGQGIAPATSQQL
Ga0318560_107267162	3300031682	Soil	MAGVGAWLLGVGTATAGSLLAVSLLGQGIAASPGQQLTADAVNQALAREAY
Ga0318496_100529183	3300031713	Soil	MRAPFLVGVGAWFLGAAAATGGSLLAVSVLGQALAPAPSQQLTETAVNRALAS
Ga0318496_100580633	3300031713	Soil	VSARFLAGVGAWLLGAVVATGGSLLAVSLLGRGIIAPAAGQQLTVAAVNRALASEAAGPP
Ga0318496_100935511	3300031713	Soil	VHRRILFGVAAWLLGAATATAGSLLAISLLGQGITGGSGQLLTQDAVNRA
Ga0318496_101242003	3300031713	Soil	MHARFLAGVGAWLLGAAAATGGSLLAVSVLGQALAPAPSQQLTETAVV
Ga0318496_101249173	3300031713	Soil	VSARFLAGVGAWLLGAAAATGGSLIAVSALGQGLTPTPSQQLTVAAVNQALASEP
Ga0318496_102238261	3300031713	Soil	MRVLAGVGAWLLGVGAATAGSLLAVSLLGQGIAASTS
Ga0318496_106167801	3300031713	Soil	VSLGRVSARFLVGVGAWLLGAAVATGGSLLAVSLLGQSLAPAGSQQLTSVAVNRA
Ga0318496_108341132	3300031713	Soil	MRVVAGVGAWLIGVGAATAGSLLAVSLLGQGIATNTSQQLTAAAVQNALAAETSDTHGANPA
Ga0307476_107618892	3300031715	Hardwood Forest Soil	MRVLAGVGAWLLGVGAATGGSLLAVSLLGQGIATGTSQQLT
Ga0318493_100695973	3300031723	Soil	VSLSGVSARYLVGVGAWLLGAAVATGGSLFAVSLLGQSLAPAPSQQLTETAVNHALASEAAEGPRASPSAT
Ga0318493_102438461	3300031723	Soil	VSLGGVSARFFVGVGAWLLGAAAATGGSLFAVSLLGQSLAPAPSQQLTVTAVNRALASEAAEGSRSS
Ga0318493_102662751	3300031723	Soil	VTLGRVSARFLAGVGAWLLGAGAATAGSLLAVSALGQGLAPTPSQQLTVAAVNQA
Ga0318493_106405901	3300031723	Soil	VSLGRVSARFLAGVGAWLLGAAAATGGSLLAVSALGQGLAPTPSQQL
Ga0318500_106163701	3300031724	Soil	MAGVGAWLLGVGTATAGSLLAVSLLGQGIAASPGQQLTADAVNQALAREAYDASAWF
Ga0318501_100957751	3300031736	Soil	MGVGAWLLGVGAATAGSLLAVWMLGQGIAPSTSQQL
Ga0318501_106947211	3300031736	Soil	VSARFLAGVGAWLLGAVVATGGSLLAVSLLGRGIIAPAAGQQ
Ga0318501_108030662	3300031736	Soil	VTLGRVSARFLAGVGAWLLGAGAATAGSLLAVSALGQGLAPTPSQQLTVAAVNQ
Ga0306918_111948492	3300031744	Soil	MRIVAGLGAWLLGAGTATAGSLLAVSLLGQGIADTQG
Ga0318502_100109321	3300031747	Soil	VSARFLVGVSAWLLGAGAATGGSLMAVSLLGQGIIGPPPSQQLTVGAVNRALASEAAEAR
Ga0318502_100512193	3300031747	Soil	MRVAAGVGAWLLGVGAATAGSLLAVSLLGQGIATN
Ga0318502_102391143	3300031747	Soil	VSLGGVSARFFVGVGAWLLGAAAATGGSLFAVSLLGQSLAPAPSQQLTVTAVNRALAS
Ga0318502_108855971	3300031747	Soil	MRNLCHVHMRVAAGVGAWLIGVGAATAGSLLAVSLLGQGIATSTSQ
Ga0318502_110298142	3300031747	Soil	MRVAAGVGAWLIGVGAATAGSLLAVSLLGQGIAAGKS
Ga0318492_103353101	3300031748	Soil	MHARFLAGVGAWLLGAAAATGGSLLAVSVLGQALAPAPSQQLTETAVVRA
Ga0318492_104147151	3300031748	Soil	VSLSGVSARYLVGVGAWLLGAAVATGGSLFAVSLLGQSLAPAPSQQLTETAVNHALA
Ga0318537_102911941	3300031763	Soil	MAGVGAWLLGVGTATAGSLLAVSLLGQGIAASPGQQLTADAVNQALAREAYDAS
Ga0318554_105602712	3300031765	Soil	MRIVAGLGAWLLGAGTATAGSLLAVSLLGQGIADTQ
Ga0318526_101636082	3300031769	Soil	MGVGAWLLGVGAATAGSLLAVWMLGQGIAPSTSQQLTAADVYRA
Ga0318526_103203152	3300031769	Soil	VSLRGVSARFLVGVGAWLLGAGAATGGSLLAVSVLGQGIIGPAPSQQLTVGAVNRALA
Ga0318521_101235821	3300031770	Soil	MAGVGAWLLGVGTATAGSLLAVSLLGQGIAASPGQRLVHR
Ga0318521_104818031	3300031770	Soil	MRIVAGLGAWLLGAGTATAGSLLAVSLLGQGIADTQGQQLTAAAVNRALAREAQ
Ga0318546_100981601	3300031771	Soil	MGVGAWLLGVGAATAGSLLAVWMLGQGIAPSTSQQLTAADVYRALATEA
Ga0318546_111755261	3300031771	Soil	MRVAAGVGAWLIGVGAATAGSLLAVSLLGQGIAAGKSQQLTESAVQRALA
Ga0318546_112557842	3300031771	Soil	MRIVAGLGAWLLGAGTATAGSLLAVSLLGQGIADTQGQQLTAAAVNRALAREAQEASPS
Ga0318543_104065632	3300031777	Soil	VSARFLVGVGAWLLGAVVATGGSLLAVSLLGRGIIAPAPSQQLTEAA
Ga0318498_101243123	3300031778	Soil	VSARFLAGVGAWLLGAAAATGGSLLAVSALGQGLAPAPSQQLTVAAVN
Ga0318566_100712081	3300031779	Soil	VHARILAGVGAWLLGAATATAGSLLAVSLLGQGIAVSPGQQLTADAV
Ga0318566_101178761	3300031779	Soil	MSLGRVHAGFLAGVGAWLLGAAAATGGSLLAVSALGQGLAPAPSQQL
Ga0318566_104213492	3300031779	Soil	MSLGGVSARFLVGVGAWLLGAGAATSGSLLAVSLLGQGLAPAPSQQLTEIAVSRALASEAVKAAPSPS
Ga0318547_103870571	3300031781	Soil	MRVLAGVGAWLLGVGAATAGSLLAVSLLGQGIAAST
Ga0318552_100236324	3300031782	Soil	VSARFLVGVSAWLLGAGAATGGSLLAVSLLGQGIIGPPPSQQLTVGAVNRAHGELL
Ga0318552_102406031	3300031782	Soil	VSLSGVSARYLVGVGAWLLGAAVATGGSLFAVSLLGQSLAPAPSQQLTVTAVN
Ga0318552_102768082	3300031782	Soil	VSARFLAGVGAWLLGAAAATGGSLLAVSALGQGLAPAPSQQLTVAA
Ga0318552_104441871	3300031782	Soil	VSARFLAGVGAWLLGAVVATGGSLLAVSLLGRGIIAPAAGQQLTVAAG
Ga0318529_101637393	3300031792	Soil	VVRATLGGVHVRILAGVGAWLLGAGTATAGSLLAVSLLGQGIADNPGQ
Ga0318529_103301371	3300031792	Soil	MSLGRVHAGFLAGVGAWLLGAAAATGGSLLAVSALGQGLAPAPSQQLT
Ga0318548_106503332	3300031793	Soil	MRVVAGVGAWLLGVGAATAGSLLAVSLLGQGIATSNS
Ga0318576_102072092	3300031796	Soil	VVRATLGGVHVRILAGVGAWLLGAGTATAGSLLAVSLLGQGIADNPGQQLTAAAVNQA
Ga0318550_105035871	3300031797	Soil	VSARFLVGVGAWLLGAVVATGGSLLAVSLLGRGIIAPAPSQQLTEAAVNRALASEAS
Ga0318550_105764171	3300031797	Soil	VSLGRVSARFLAGVGAWLLGASAATGGSLLAVSALGQGLAPAPSQQLTEIAVS
Ga0318523_102096661	3300031798	Soil	MRVVAGVGAWLLGVGAATAGSLLAVSLLGQGIATSASQQLTESAVQRALAAEATET
Ga0318523_105648041	3300031798	Soil	VSARFLAGVGAWLLGAVVATGGSLLAVSLLGRGIIAPAAGQQLTVAAVNR
Ga0318565_100292211	3300031799	Soil	VSARFLVGVSAWLLGAGAATGGSLLAVSLLGQGIIGPPPSQQLTVGAVN
Ga0318565_100437281	3300031799	Soil	MAGVGAWLLGVGTATAGSLLAVSLLGQGIAASPGQQLTADAVNQALGREA
Ga0318497_101536511	3300031805	Soil	MGVGAWILGIGAATAGSLLAVSLLGQGIAPVRNQQLNAAAVNRALSAEAGETSAAVVSPPALTPS
Ga0318497_101908551	3300031805	Soil	VSLGRVSARFLAGVGAWLLGAAAATGGSLLAVSALGQGLAPTPSQQLTVAAVNQALAS
Ga0318567_104750451	3300031821	Soil	VSARFLVGVSAWLLGAGAATGGSLLAVSLLGQGIIGPPPSQQLTVGAV
Ga0318564_100774071	3300031831	Soil	VSLGRVSARFLAGVGAWLLGAAAATGGSLLAVSALGQGLAPTPSQQLTVAAL
Ga0318564_101489621	3300031831	Soil	MRVAAGVGAWLLGVGAATAGSLLAVSLLGQGIATNTSQQLTESTVKRALAAEASETS
Ga0318511_101236071	3300031845	Soil	MRNLCHVHMRVAAGVGAWLIGVGAATAGSLLAVSLLGQGISTSTSQQLTESAVQSA
Ga0318511_104192721	3300031845	Soil	VSLSGVSARYLVGVGAWLLGAAVATGGSLFAVSLLGQSLAPAPSQQLTETAVNHALASEAAEGPR
Ga0318512_100910371	3300031846	Soil	MGVGAWLLGVGAATAGSLLAVSLLGQGIAPATSQQLSAATVTQALANETDEPTPQTASL
Ga0318512_105732051	3300031846	Soil	VSLGGVSARFFVGVGAWLLGAAAATGGSLFAVSLLGQSLAPAPSQQLTVTAVNRALASEAAE
Ga0318527_103553542	3300031859	Soil	MGVGAWLLGVGAATAGSLLAVWMLGQGIAPSTSQQLTAADVYRAL
Ga0318495_100826023	3300031860	Soil	VSLSGVSARYLVGVGAWLLGAAVATGGSLFAVSLLGQSLAPAPSQQLTETAVNHALASEA
Ga0318495_101732771	3300031860	Soil	MRIVAGLGAWLLGAGTATAGSLLAVSLLGQGIADTQGQQLTAAAVNRALARE
Ga0318495_104393041	3300031860	Soil	VSLGGVSARFFVGVGAWLLGAAAATGGSLFAVSLLGQSLAPAPSQQLTVTAVNRALASEAAEGPR
Ga0318495_105080322	3300031860	Soil	VHARILAGVGAWLLGAGAATAGSLLAVSLLGQGIAASPGQQLTANAVNQALAREAHDAS
Ga0318544_104287941	3300031880	Soil	VVRATLGGVHVRILAGVGAWLLGAGTATAGSLLAVSLLGQGIADNPGQQLTA
Ga0306925_102542911	3300031890	Soil	MGVGAWLLGVGAATAGSLLAVWMLGQGIAPSTSQQLTSADEYRALATEA
Ga0318551_100938611	3300031896	Soil	MGVGAWLLGVGAATAGSLLAVWMLGQGIAPSTSQQLTAADVYRALATEAS
Ga0318551_101130313	3300031896	Soil	MRNLCHVHMRVAAGVGAWLIGVGAATAGSLLAVSLLGQGISTS
Ga0318551_101596383	3300031896	Soil	VSLGGVSARFFVGVGAWLLGAAAATGGSLFAVSLLGQSLAPAPSQQLTVTAVNRALASEAAEGSR
Ga0318551_107157072	3300031896	Soil	VSLGRVSARFLAGVGAWLLGAAAATGGSLLAVSALGQGLAPTPSQQLTVAAVNQ
Ga0318520_107608741	3300031897	Soil	MRVVAGVGAWLLGVGAATAGSLLAVSLLGQGIATNTSQQLTAAAVQNALAAEACVTHGPV
Ga0310916_102889101	3300031942	Soil	VRVFMGVGAWLLGVGAATAGSLLAVSLLGQGIAPATSQQ
Ga0306926_100451636	3300031954	Soil	VSARFLVGVSAWLLGAGAATGGSLLAVSLLGQGIIGPPPSQQLTVGAVNRALASEAAEARSSPSSA
Ga0318530_104044021	3300031959	Soil	MGVGAWLLGVGAATAGSLLAVWMLGQGIAPSTSQQLTAADVYRALAT
Ga0307479_106224652	3300031962	Hardwood Forest Soil	MRVLAGVGAWLVGVGAATGGSLLAVSLLGQGIATGTSQQLTALAVNHALAAEASDSPGPGPATT
Ga0306922_104119213	3300032001	Soil	MRVVAGVGAWLLGVGAATAGSLLAVSLLGQGIATNTSQQLTAAAVQNALAAEASETHGPVPATS
Ga0318562_106861731	3300032008	Soil	MRVVAGVGAWLLGVGAATAGSLLAVSLLGQGIATSN
Ga0318563_101223291	3300032009	Soil	MGVGAWLLGVGAATAGSLLAVWMLGQGIAPSTSQQLTAADVYRALATEASE
Ga0318569_101036721	3300032010	Soil	VHARILAGVGAWLLGAGAATAGSLLAVSLLGQGIAASPGQQLTANAVNQAL
Ga0318569_104178932	3300032010	Soil	VRTRVLAGVGAWLLGAVAATCGSLLAVSMLGQGIAAPPSQQLTAAMVNRAL
Ga0318507_101866752	3300032025	Soil	VSARFLAGVGAWLLGAVVATGGSLLAVSLLGRGIIAPAAGQQL
Ga0310911_105384101	3300032035	Soil	VSLLRVYARFLAGVGAWLLGAGAATGGSLLAVSVLGQGLAPAPSQQLTETAVN
Ga0310911_106507122	3300032035	Soil	MRVAAGVGAWLLGVGAATAGSLLAVSLLGQGIATNTSQQLTEST
Ga0318559_100614741	3300032039	Soil	MGVGAWLLGVGAATAGSLLAVWMLGQGIAPSTSQQLTAADVYRALATEASEASVP
Ga0318549_100467161	3300032041	Soil	MGVGAWLLGVGAATAGSLLAVSLLGQGIAPATSQQLSAATVTQALAN
Ga0318558_104045432	3300032044	Soil	VSARFLAGVGAWLLGAAAATGGSLIAVSALGQGLTPTPSQQLTVAAVNQALASEPTET
Ga0318558_105211581	3300032044	Soil	VSLGGVSARFFVGVGAWLLGAAAATGGSLFAVSLLGQSLAPAPSQQLTVTAV
Ga0318558_105604931	3300032044	Soil	MRVVAGVGAWLLGVGAATAGSLLAVSLLGQGIATNTSQQLTAAAVQNALAA
Ga0318506_100790011	3300032052	Soil	MRNLCHVHMRVAAGVGAWLLGVGAATAGSLLAVSLLGQGIATSNNQ
Ga0318570_101794072	3300032054	Soil	VSARFLVGVSAWLLGAGAATGGSLLAVSLLGQGIIGPPPSQQLTVGAVNRALA
Ga0318570_102661842	3300032054	Soil	MSLGGVSARFLVGVGAWLLGAGAATSGSLLAVSLLGQGLAPAPSQQLTEIAVSRALASEAVKAAPSPSPPR
Ga0318533_110861741	3300032059	Soil	VSARFLVGVSAWLLGAGAATGGSLLAVSLLGQGIIGPPPSQQLTVGAVNRALASEAAEARSSPS
Ga0318510_102983932	3300032064	Soil	MRIVAGLGAWLLGAGTATAGSLLAVSLLGQGIADTQGQQLTAAAVNRALAREAQE
Ga0318524_100803121	3300032067	Soil	MRIVAGLGAWLLGAGTATAGSLLAVSLLGQGIADTQGQQLTAAAVNRALAREAQEASQS
Ga0318524_102997001	3300032067	Soil	VSLRGVSARFLVGVGAWLLGAGAATGGSLLAVSVLGQGIIGPAPSQQLTVGAVNRALAS
Ga0318524_107939122	3300032067	Soil	VSARFLAGVGAWLLGAVVATGGSLLAVSLLGRGIIAPAAGQQLTVAAVNRA
Ga0318553_100811813	3300032068	Soil	MRVAAGVGAWLLGVGAATAGSLLAVSLLGQGIATNTSQQLTES
Ga0318553_105025842	3300032068	Soil	MRVLAGVGAWLLGVGAATAGSLLAVSLLGQGIAASTSQQLTSAAVNN
Ga0318553_107245331	3300032068	Soil	MRVAAGVGAWLIGVGAATAGSLLAVSLLGQGIAAGKSQQLTESAVQ
Ga0318553_107508942	3300032068	Soil	VSLGRVSARFLAGVGAWLLGAAAATGGSLLAVSALGQGLAPTPSQQLTVAALKQALAS
Ga0306924_123993972	3300032076	Soil	VSLGGVSARFFVGVGAWLLGAAAATGGSLFAVSLLGQSLAPAPSQQLTVTAVN
Ga0318525_100395731	3300032089	Soil	VRILAGVGAWLLGAGTATAGSLMAVSLLGQGIADSPGQQLTAAAVNRALAREAQEASSP
Ga0318525_102286591	3300032089	Soil	MRVLAGVGAWLLGVGAATAGSLLAVSLLGQGIAASTNQQLTS
Ga0318518_101046741	3300032090	Soil	VSARFLAGVGAWLLGAVVATGGSLLAVSLLGRGIIAPAAGQQLTVAAVNRALAS
Ga0318518_106175392	3300032090	Soil	VSARFLAGVGAWLLGAAAATGGSLLAVSALGQSLAPAPSQQLT
Ga0318577_104427022	3300032091	Soil	MGVGAWLLGVGAATAGSLLAVWMLGQGIAPSTSQQLTAADVYRALATE
Ga0318540_105047741	3300032094	Soil	MRNLCHVHMRVAAGVGAWLIGVGAATAGSLLAVSLLGQGIAAGKS
Ga0318540_106363912	3300032094	Soil	MRVVAGVGAWLLGVGAATAGSLLAVSLLGQGIATN
Ga0307470_110548992	3300032174	Hardwood Forest Soil	MRILAGVGAWLLGAGTATAGSLLAVSLLGQGIAASPSQQLTGAAVNRALARESRGPGQD
Ga0307471_1006941103	3300032180	Hardwood Forest Soil	MRILAGVGAWLLGAGTATAGSLLAVSLLGQGIAASPSQQLTG
Ga0335078_111378341	3300032805	Soil	MRILAGVGAWLLGVSAATAGSLLAVSLLGQGIAASPGQQLTAAAVN
Ga0335081_102668033	3300032892	Soil	MRKRVFIGVGAWVVGAGVATGGSLLAVSLLGQGIASSPSEQLSGSAVSNALASGKSAT
Ga0335077_115886481	3300033158	Soil	MRKRVFIGVGAWVVGAGVATGGSLLAVSLLGQGIASSPSEQLSG
Ga0310914_115159771	3300033289	Soil	VSARFLAGVGAWLLGAAAATGGSLLAVSALGQSLAPAPSQQLTVAAVS
Ga0318519_101338811	3300033290	Soil	MSLGRVHAGFLAGVGAWLLGAAAATGGSLLAVSALGQGLAPAPSQQLTAIAVSR
Ga0318519_105689971	3300033290	Soil	VSLSGVSARYLVGVGAWLLGAAVATGGSLFAVSLLGQSLAPAPSQQLTVTAVNRALASEAAEGPRSSPPATPSASPS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters