NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F029549

Metagenome / Metatranscriptome Family F029549

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F029549
Family Type Metagenome / Metatranscriptome
Number of Sequences 188
Average Sequence Length 61 residues
Representative Sequence MPVAIPPDSEVAEEPAPGSAERLSYLDAGGRLASRETAQFAVVRDFDDRGNVISLMTERLTH
Number of Associated Samples 145
Number of Associated Scaffolds 188

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 71.28 %
% of genes near scaffold ends (potentially truncated) 31.38 %
% of genes from short scaffolds (< 2000 bps) 79.79 %
Associated GOLD sequencing projects 140
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (69.681 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(14.894 % of family members)
Environment Ontology (ENVO) Unclassified
(25.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(28.191 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.
1ICCgaii200_07958551
2F14TC_1036292501
3JGI10213J12805_103986502
4JGI10216J12902_1032969032
5JGI10216J12902_1060978802
6JGI10216J12902_1138365991
7JGIcombinedJ43975_100520411
8JGIcombinedJ43975_100824801
9JGI25407J50210_100209862
10JGI25407J50210_100542962
11JGI25407J50210_101379232
12JGI25407J50210_101578141
13JGI25404J52841_101281692
14Ga0066809_101598951
15Ga0066676_108550801
16Ga0066682_101623462
17Ga0070698_1000498292
18Ga0058697_100339482
19Ga0058697_102373202
20Ga0058697_103780961
21Ga0066694_104949431
22Ga0081455_101606622
23Ga0081455_110628021
24Ga0081538_102419071
25Ga0082029_15408993
26Ga0074047_101195882
27Ga0074050_103789821
28Ga0075421_1005707292
29Ga0075431_1021878471
30Ga0075433_102835341
31Ga0075433_113251181
32Ga0075429_1018688771
33Ga0075424_1016401872
34Ga0079216_118301171
35Ga0105679_107238731
36Ga0105098_102727962
37Ga0111539_101478923
38Ga0075418_110207582
39Ga0075418_110764742
40Ga0114129_103244283
41Ga0114129_108034242
42Ga0111538_113197692
43Ga0105092_102041162
44Ga0075423_102214401
45Ga0126307_100583773
46Ga0126307_113988292
47Ga0105056_10002284
48Ga0105071_10284032
49Ga0105057_10040872
50Ga0105070_10702311
51Ga0105062_10040033
52Ga0105062_10205561
53Ga0105078_10444901
54Ga0105068_10837141
55Ga0105058_10254221
56Ga0105058_10583111
57Ga0126313_100600132
58Ga0126313_110202921
59Ga0126313_112059111
60Ga0126304_105065312
61Ga0126312_113542431
62Ga0126310_112405601
63Ga0126311_116622302
64Ga0127483_12545311
65Ga0126306_103968721
66Ga0134086_103167281
67Ga0105239_127910341
68Ga0138513_1000797092
69Ga0138514_1000446782
70Ga0120192_100091121
71Ga0120191_101333401
72Ga0137365_100042135
73Ga0137365_111693001
74Ga0137374_100100843
75Ga0137374_100330872
76Ga0137374_100862461
77Ga0137374_101077002
78Ga0137374_101809152
79Ga0137374_103830961
80Ga0137380_1000050228
81Ga0137378_105157032
82Ga0137377_116527261
83Ga0137372_1000010024
84Ga0137369_101197612
85Ga0137371_100451231
86Ga0137371_113690662
87Ga0137384_115782032
88Ga0137373_100083729
89Ga0162653_1000011273
90Ga0162651_1000036872
91Ga0162651_1000037763
92Ga0162650_1000104953
93Ga0162650_1000283531
94Ga0182000_100317482
95Ga0182001_100567732
96Ga0182008_100573732
97Ga0132258_101087335
98Ga0134074_13264731
99Ga0163161_109912311
100Ga0184610_10000387
101Ga0184610_10735132
102Ga0184610_12193611
103Ga0184604_100097393
104Ga0184605_101949461
105Ga0184608_101520371
106Ga0184634_100478223
107Ga0184638_10170022
108Ga0184621_101905002
109Ga0184623_103747601
110Ga0184619_103114101
111Ga0184619_104385871
112Ga0184637_1000100920
113Ga0184624_103175262
114Ga0184609_100043082
115Ga0184609_100187833
116Ga0190275_103158382
117Ga0190269_104639171
118Ga0190269_120184731
119Ga0190274_100260241
120Ga0190274_124402551
121Ga0190274_135968971
122Ga0190271_131578192
123Ga0190273_107647541
124Ga0184645_10116202
125Ga0184645_10682921
126Ga0184641_10463051
127Ga0184646_11513341
128Ga0184644_12989042
129Ga0193705_10995371
130Ga0193741_10926261
131Ga0193739_10065933
132Ga0193697_10976571
133Ga0222625_16031191
134Ga0193714_10358821
135Ga0207708_110371412
136Ga0208070_1012021
137Ga0208581_1005801
138Ga0209896_10280752
139Ga0209877_10119721
140Ga0209879_10014713
141Ga0209874_11174262
142Ga0209795_100896862
143Ga0209461_100146291
144Ga0209461_100444561
145Ga0209814_1000003234
146Ga0209486_109071732
147Ga0209868_10084201
148Ga0247818_101021131
149Ga0247823_107960842
150Ga0307291_10116751
151Ga0307301_100438491
152Ga0307282_100110061
153Ga0307299_100148343
154Ga0247825_100293935
155Ga0307296_103040051
156Ga0307310_104946581
157Ga0307278_1000016120
158Ga0307278_100003147
159Ga0307278_100035173
160Ga0307277_104822242
161Ga0307308_102734441
162Ga0247826_103306142
163Ga0268240_101492751
164Ga0268258_101045691
165Ga0268242_10288381
166Ga0268255_101599391
167Ga0308202_10275262
168Ga0308206_11360631
169Ga0308204_102778992
170Ga0308199_11518091
171Ga0307408_1000160673
172Ga0307408_1010376481
173Ga0307405_102312222
174Ga0307405_108078271
175Ga0307413_105237451
176Ga0307413_116823231
177Ga0307413_116882812
178Ga0307410_101876652
179Ga0307406_102341321
180Ga0307412_100105167
181Ga0307412_107006391
182Ga0307416_1019125891
183Ga0307416_1026607452
184Ga0334909_037392_130_318
185Ga0364945_0108764_594_782
186Ga0334913_003111_3936_4124
187Ga0334921_156818_105_293
188Ga0334931_017573_276_464
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 12.90%    β-sheet: 20.97%    Coil/Unstructured: 66.13%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

51015202530354045505560MPVAIPPDSEVAEEPAPGSAERLSYLDAGGRLASRETAQFAVVRDFDDRGNVISLMTERLTHSequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
30.3%69.7%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Freshwater Sediment
Groundwater Sediment
Groundwater Sediment
Soil
Soil
Vadose Zone Soil
Serpentine Soil
Grasslands Soil
Terrestrial
Termite Nest
Agricultural Soil
Soil
Soil
Sub-Biocrust Soil
Soil
Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Hypolithic Biocrust
Groundwater Sand
Soil
Sediment
Soil
Arabidopsis Rhizosphere
Tabebuia Heterophylla Rhizosphere
Switchgrass Rhizosphere
Tabebuia Heterophylla Rhizosphere
Populus Rhizosphere
Rhizosphere
Corn Rhizosphere
Rhizosphere
Agave
Agave
3.2%8.5%14.9%4.8%9.0%5.3%4.3%8.0%3.7%7.4%6.9%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
ICCgaii200_079585512228664021SoilMPVAIPPDSEVAEEPAPGSAERLSYLDAGGRLASRETAQFAVVRDFDDHGNVISLMTERLAR
F14TC_10362925013300000559SoilVATPPDSEVAQEPIPGGLQRLYYLDAGGRPDPRESAQVAVIRDFDDYGNVISLVTERLSG
JGI10213J12805_1039865023300000858SoilMPVATPPDSEAAQEPAPGDGERVFFLDSGGRLVPRETAQFAVVRDFDEDGNVISLMTERLSR*
JGI10216J12902_10329690323300000956SoilMPVATPPDSEAAQEPAPGGAERVSYLDAGGRLVSRETAQFAVVRDFDDRGNVISLMTERLSR*
JGI10216J12902_10609788023300000956SoilMPVATPPDSEVAQEPVPGGLQRLSFLDAGGRPASRESAQVAVIRDFDDYGNVISLVTERLPG*
JGI10216J12902_11383659913300000956SoilMPVATPPDSEVAQEPIPGGLQRLYYLDAGGRPAPRESAQVAVIRDFDDYGNVISLVTERLSG*
JGIcombinedJ43975_1005204113300002899SoilVAIPPDSEVAEEPAPGSAERLSYLDAGGRLVSRETAQFAVVRDFDDRGNVISLMTERLTH
JGIcombinedJ43975_1008248013300002899SoilVAIPPDSEVAEEPAPGGAERLSYLDAGGRLASRETAQFAVVRDFDDHGNVISLMTERLAR
JGI25407J50210_1002098623300003373Tabebuia Heterophylla RhizosphereMPVATPPDSEAAQEPAPGGGERVFYLDAGGQLVSRETAQFAVGRDFDEHGNVISLMTERLSR*
JGI25407J50210_1005429623300003373Tabebuia Heterophylla RhizosphereRGGMPVAIPPDSEVAEEPAPGSAERLSYLDAGGRLASRETAQFAVVRDFDDRGNVISLMTERLTH*
JGI25407J50210_1013792323300003373Tabebuia Heterophylla RhizosphereVALPPDSEVVEEPAPGSAERLSYLDAGGRLASRETAQFAVVRDFDDHGNVISLMTERLTH
JGI25407J50210_1015781413300003373Tabebuia Heterophylla RhizosphereMPVATPPDSEAAQEPAPGGGERVFFLDAGGRLAPRETAQFAVVRDFDEHGNVISLMTERLSR*
JGI25404J52841_1012816923300003659Tabebuia Heterophylla RhizosphereVAIPPDSEVAEEPAPGSAERLSYLDAGGRLAPRETAQFAVVRDFDDRGNVISLITERLTH
Ga0066809_1015989513300005168SoilVAIPPDSEVAEEPAPGSAERLSYLDAGGRLASRETAQLAVVRDFDDRGNVISLITERLTH
Ga0066676_1085508013300005186SoilVATPPDSEVAQEPVPGSLQRLSYLDAGGRPASRESAQVAVIRDFDDYGNVIS
Ga0066682_1016234623300005450SoilMPVATPPDSEVAQEPIPGGLQRLSFLDAGGRPVSRESAQVAAIRDFDDYGNVISLVTERLPG*
Ga0070698_10004982923300005471Corn, Switchgrass And Miscanthus RhizosphereVATPADSEAAQEPAPAITERLSYLDAGGRLVPREAAQFAVIRDFDDDGNVISFMTERL*
Ga0058697_1003394823300005562AgaveMPVATPPDSEAAQEPGPGDGERVFFLDAGGRLVPRETAQFAVVRDFDDDGNVISLMTERLSR*
Ga0058697_1023732023300005562AgaveVAIPPDSEVAEEPAPGSAERLSYLDAGGRLAPRETAQFAVVRDFDDHGNVISLITERLTP
Ga0058697_1037809613300005562AgaveMPVAIPPDSEVAEEPAPGSAERLSYLDAGGRLASRETAQFAVVRDFDDHGNVISLITERLTH*
Ga0066694_1049494313300005574SoilRRGGMPVATPPDSEVAQEPIPGGLQRLSFLDAGGRPVSRESAQVAVIRDFDDYGNVISLVTERLPG*
Ga0081455_1016066223300005937Tabebuia Heterophylla RhizosphereVATPADSEAAQEPAPASNERLSYLDAGGRLVPREAAQFAVIRDFDDDGNVISFMTERL*
Ga0081455_1106280213300005937Tabebuia Heterophylla RhizosphereMPVAIPPDSEVAEEPAPGSAERLSYLDAGGRLASRETAQLAVVRDFDDRGNVISLMTERLTH*
Ga0081538_1024190713300005981Tabebuia Heterophylla RhizosphereVAIPPDSEVAEEPAPGGAERLSYLDAGGRLASRETAQFAVVRDFDDRGNVISLMTERLTH
Ga0082029_154089933300006169Termite NestVAIPPDSEVAEEPAPGSAERLSYLDAGGRLAPREMAQFAVVRDFDDRGNVISLITERLTH
Ga0074047_1011958823300006576SoilASPRGGMPVAIPPDSEVAEEPAPGSAERLSYLDAGGRLASRETAQLAVVRDFDDRGNVISLITERLTH*
Ga0074050_1037898213300006577SoilMPVAIPPDSEVAEEPAPGSAERLSYLDAGGRLASRETAQFAVVRDFDDRGNVISLITERLTH*
Ga0075421_10057072923300006845Populus RhizosphereVATPADSEAAQEPAPAIPERLSYLDAGGRLVPREAAQFAVIRDFDDDGNVISFMTERLSH
Ga0075431_10218784713300006847Populus RhizosphereVAIPPDSEVAEEPAPGSAERLSYLDAGGRLASRETAQFAVVRDFDDDGNVIS
Ga0075433_1028353413300006852Populus RhizosphereGMPVAIPPDSEVAEEPAPGSAERLSYLDAGGRLASRETAQFAVVRDFDDDGNVISLMTERLAR*
Ga0075433_1132511813300006852Populus RhizosphereGMPVAIPPDSEVAEEPAPGSAERLSYLDAGGRLASRETALFAVVRDFDDHGNVISLITERLTH*
Ga0075429_10186887713300006880Populus RhizosphereVAIPPDSEVAEEPAPGSAERLSYLDAGGRLASRETAQLAVVRDFDDRGNVISLMTERLTH
Ga0075424_10164018723300006904Populus RhizospherePDSEVAEEPAPGSAERLSYLDAGGRLASRETAQFAVVRDFDDDGNVISLMTERLAR*
Ga0079216_1183011713300006918Agricultural SoilVASPPDSEVAEEPAPGSAERLSYLDAGGRLASRETAQFAVVRDFDDHGNVISLMTERLTH
Ga0105679_1072387313300007790SoilRGGMPVAVPPDSEVAEEPPPGGAERLSYLDAGGRLASRETAQFAVVRDFDDRGNVISLITERLTH*
Ga0105098_1027279623300009081Freshwater SedimentMPVAIPPDSEVAEEPAPGSAERLSYLDAGGRLAPRETAQFAVVRDFDDRGNVISLMTERLTR*
Ga0111539_1014789233300009094Populus RhizosphereMPVAIPPDSEVAEEPAPGSAERLSYLDAGGRLASRETAQFAVVRDFDDDGNVISLMTERLAR*
Ga0075418_1102075823300009100Populus RhizosphereAIPPDSELAEEPAPGSAERLSYLDAGGRLASRETAQFAVVRDFDDRGNVISLITERLTH*
Ga0075418_1107647423300009100Populus RhizosphereAEEPAPGSAERLSYLDAGGRLASRETAQFAVVRDFDDDGNVISLMTERLAR*
Ga0114129_1032442833300009147Populus RhizosphereMPVATPPDSEVAEEPIPGGLQRLYYLDARGRPAPRESAQVAVIRDFDDYGNVISLVTERLSG*
Ga0114129_1080342423300009147Populus RhizosphereMPVATPPDSEAAQEPAPGSGERVFFLDAGGRLVPRETAQFAVVRDFDDDGNVISLMTERLSR*
Ga0111538_1131976923300009156Populus RhizosphereGGMPVAIPPDSEVAEEPAPGSAERLSYLDAGGRLASRETAQFAVVRDFDDDGNVISLMTERLAR*
Ga0105092_1020411623300009157Freshwater SedimentMPVAIPPDSEVAEEPAPGSAERLSYLDAGGRLASRETAKFAVVRDFDDRGNVISLMTERLTH*
Ga0075423_1022144013300009162Populus RhizosphereMPVAIPPDSEVAEEPAPGSAERLSYLDAGGRLASRETALFAVVRDFDDHGNVISLITERLTH*
Ga0126307_1005837733300009789Serpentine SoilMPVAIPPDSEVAEEPAPGSAERLSYLDAGGRLVSRETAQFAVVRDFDDRGNVISLMTERLTH*
Ga0126307_1139882923300009789Serpentine SoilMPVAIPPDSEVAEEPAPGSAERLSYLDAGGRLAPRETAQFAVVRDFDDRGNVISLITERLTH*
Ga0105056_100022843300009801Groundwater SandMPVATPPDSEAAQEPAPGSGERVFFLDAGGRLAPRETAQFAVVRDFDEHGNVISLMTERLSR*
Ga0105071_102840323300009808Groundwater SandMPVATPADSEAAQEPAPGSGERVFFLDAGGRLAPRETAQFAVVRDFDEQGNVISLM
Ga0105057_100408723300009813Groundwater SandMPVATPPDSEAAQEPAPGSGERVFFLDAGGRLAPRETAQFAVVRDFDEQGNVISLMTERLSR*
Ga0105070_107023113300009815Groundwater SandPPDSEAAQEPAPGSGERVFFLDAGGRLAPRETAQFAVVRDFDEHGNVISLMTERLSR*
Ga0105062_100400333300009817Groundwater SandMPVATPPDSEAAQEPAPGGAERVSYLDAGGRLVSRETAQFAVVRDFDEQGNVISLMTERLSR*
Ga0105062_102055613300009817Groundwater SandGAAADGGGMPVATPPDSEAAQEPAPGSGERVFYLDAGGRLASRETAQLAVVRDFDDYGNVISLMTERLSR*
Ga0105078_104449013300009823Groundwater SandMPVATPPDSEAAQEPAPGSGERVFFLDAGGRLVSRETAQFAVVRDFDEHGNVISLMTERLSR*
Ga0105068_108371413300009836Groundwater SandMPVATPPDSEAAQEPAPGSGERVFFLDAGGRLAPRETAQFAVVRDFDEHGNVISLMTERL
Ga0105058_102542213300009837Groundwater SandGGGMPVATPPDSEAAQEPAPGSGERVFYLDAGGRLASRETAQLAVVRDFDDYGNVISLMTERLSR*
Ga0105058_105831113300009837Groundwater SandMPVAKPPDSEVAEEPAPGSAERLSYLDAGGRIASRETAQFAVVRDFDDYGNVISLMTERLTH*
Ga0126313_1006001323300009840Serpentine SoilMPVAIPPDSEEAQEPAPGGERVLYLDAGGQLVSRETAQFAVGRDFDEHGNVISLMTERLSR*
Ga0126313_1102029213300009840Serpentine SoilMPVAIPPDSEVAEEPAPGSAERLSYLDAGGRLAPRETAQFAVVRDFDDRGNVISLITERLAH*
Ga0126313_1120591113300009840Serpentine SoilMPVAIPPDSEVAEEPAPGGAERLSYLDAGGRLASRETAQFAVVRDFDDHGNVISLMTERLAR*
Ga0126304_1050653123300010037Serpentine SoilMPVAIPPDSEVAEEPAPGSAERLSYLDAGGRLASRETAQFAVVRDFDDRGNVISLITERLTR*
Ga0126312_1135424313300010041Serpentine SoilMPVATPPDSEAAQEPAPGSGERVFFLDAGGRLASRETAQFAVVRDFDEHGNVISLMTERLSR*
Ga0126310_1124056013300010044Serpentine SoilVAEEPAPGSAERLSYLDAGGRLAPRETAQFAVVRDFDDRGNVISLITERLTH*
Ga0126311_1166223023300010045Serpentine SoilAIPPDSEVAEEPAPGSAERLSYLDAGGRLAPRETAQFAVVRDFDDRGNVISLITERLTH*
Ga0127483_125453113300010142Grasslands SoilMPVATPPDSEVAQEPVPGSLQRLSYLDAGGRPASRESAQVAVIRDFDDYGNVISLVTERLPG*
Ga0126306_1039687213300010166Serpentine SoilMPVAIPPDSEVAEEPAPGSAERLSYLDAGGRLASRETAQFAVVRDFDDRGNVISLMTERLTH*
Ga0134086_1031672813300010323Grasslands SoilDSEVAQEPIPGGLQRLSFLDAGGRPVSRESAQVAVIRDFDDYGNVISLVTERLPG*
Ga0105239_1279103413300010375Corn RhizosphereMPVAIPPDSEVAEEPAPGSAERLSYLDAGGRLASRETAQFAVVRDFDDRGNVISLI
Ga0138513_10007970923300011000SoilVAEEPAPGSAERLSYLDAGGRLASRETAQFAVVRDFDDRGNVISLITERLTH*
Ga0138514_10004467823300011003SoilMPVAIPPDSEVAEEPAPGSAERLSYLDAGGRLASRETAQLAVFRDFDDRGNVISLITERLTR*
Ga0120192_1000911213300012021TerrestrialMPVATPPDSEAAQEPAPGSGERVFYLDAGGQLVSRETAQFAVGRDFDEHGNVISLMTERLSR*
Ga0120191_1013334013300012022TerrestrialMPVATPPDSEAAQEPAPGGAERVSYLDAGGRLVSRETAQFAVVRDFDEHGNVISLMTERLSR*
Ga0137365_1000421353300012201Vadose Zone SoilVATPADSEAAQEPAPAINERLSYLDAGGRLVPREAARFAVIRDFDDEGNVISFMTERL*
Ga0137365_1116930013300012201Vadose Zone SoilVAIPPDSEVAQEPAPGSNQRLSYLDASFQVVSRDTAQFAVVRDFDDDGNVISFMTERLSY
Ga0137374_1001008433300012204Vadose Zone SoilVAKPADSEAAQEPAPGSTQRLSYLDAGGRLVSREAAQFAVIRDFDDDGNVISFMTERLSH
Ga0137374_1003308723300012204Vadose Zone SoilVATPADSEAAQEPAPGSTQRLSFLDAGGRLVSREAAQFAVIRDFDDDGNVISLMTERLSH
Ga0137374_1008624613300012204Vadose Zone SoilVATPADSEAAQEPAPAIVQRLSFLDAGGKLVPREAAQFAVIRDFDDDGNVISFMTERLTH
Ga0137374_1010770023300012204Vadose Zone SoilVATPPDSEVAQEPIPGGLQRLSYLDAGGRPASRESAQVAVIRDFDDYGNVISLVTERLSG
Ga0137374_1018091523300012204Vadose Zone SoilVATPADSEAAQEPAPAITERLSYLDAGGRLVPREAAQFAVIRDFDDEGNVISFMTERLRH
Ga0137374_1038309613300012204Vadose Zone SoilPDSEAAQEPAPGSGERVFFLDAGGRLAPRETAQFAVVRDFDEHGNVISLMTERLSR*
Ga0137380_10000502283300012206Vadose Zone SoilVATPADSEAAQEPAPAIYERLSYLDAGGRLVPREAAQFAVIRDFDDEGNVISFMTERL*
Ga0137378_1051570323300012210Vadose Zone SoilVATPADSEAAQEPAPAIYERLSYLDAGGRLVPREAARFAVIRDFDDEGNVISFMTERL*
Ga0137377_1165272613300012211Vadose Zone SoilVAIPPDSEVAQEPAPGSNQRLSYLDASFQVVSRDTAQFAVVRDFDDDGNVISFMTE
Ga0137372_10000100243300012350Vadose Zone SoilMIWPPALPALPGAVRRGGLPVATPPDSEVAQEPIPGGLQRLSYLDAGGRPASRESAQVAVIRDFDDYGNVISLVTERLSG*
Ga0137369_1011976123300012355Vadose Zone SoilVATPADSEAAQEPAPGSTQRLSYLDAGGRLVSREAAQFAVIRDFDDDGNVISFMTERLSH
Ga0137371_1004512313300012356Vadose Zone SoilVAIPPDSEVAQEPAPGSNQRLSYLDASFQLVSRDTAQFAVVRDFDDDGNVISFMTERLSY
Ga0137371_1136906623300012356Vadose Zone SoilEGGQPVATPADSEAAQEPAPAINERLSYLDAGGRLVPREAARFAVIRDFDDEGNVISFMTERL*
Ga0137384_1157820323300012357Vadose Zone SoilPASAPDEGGQPVATPADSEAAQEPAPAIYERLSYLDAGGRLVPREAAQFAVIRDFDDEGNVISFMTERL*
Ga0137373_1000837293300012532Vadose Zone SoilVATPADSEAAQEPAPAINERLSYLDAGGRLVPREAARFAVIRDFDDEGNFISFMTERL*
Ga0162653_10000112733300012937SoilMPVAIPPDSEVAEEPAPGSAERLSYLDAGGRRASRETAQFAVVRDFGDHGNVISLITERLTH*
Ga0162651_10000368723300012938SoilMPVAIPPDSEVAEEPAPGSAERLSYLDAGGRLVPRETAQFAVVRDFDDHGNVISLITERLTH*
Ga0162651_10000377633300012938SoilMPVAIPPDSEVAEEPAPGGAERLSYLDAGGRLASRETAQLAVFRDFDDRGNVISLITERLTR*
Ga0162650_10001049533300012939SoilVAEEPAPGSAERLSYLDAGGRLASRETAQFAVVRDFDDRGNVISLMTERLTH*
Ga0162650_10002835313300012939SoilMPVAIPPDSEVAEEPAPGSAERLSYRDAGGRLVPRETAQFAVVRDFDDHGNVISLITERLTH*
Ga0182000_1003174823300014487SoilMPVATPPDSEAAQEPGPGSGERVFFLDAGGRLVPRETAQFAVVRDFDDDGNVISLMTERLSR*
Ga0182001_1005677323300014488SoilMPVALPPDSEVVEEPAPGSAERLSYLDAGGRLASRETAQFAVVRDFDDRGNVISLITERLTH*
Ga0182008_1005737323300014497RhizosphereMPVASPPDSEVAEEPAPGSAERLSYLDAGGRLASRETAQFAVVRDFDDHGNVISLMTERLVR*
Ga0132258_1010873353300015371Arabidopsis RhizosphereMPVAIPPDSEVAEEPAPGSAERLSYLDAGGRLASRETAQFAVARDFDDRGNVISLITERLTH*
Ga0134074_132647313300017657Grasslands SoilMPVATPPDSEVAQEPIPGGLQRLSFLDAGGRPVSRESAQVAVIRDFDDYGNVISLVTERLPG
Ga0163161_1099123113300017792Switchgrass RhizosphereVAIPPDSEVAEEPAPGSAERLSYLDAGGRLASRETAQFAVVRDFDDHGNVISLMTERLAR
Ga0184610_100003873300017997Groundwater SedimentVATPTETEVAQEPMSGGLQRLSFLDAGGRPVSRESASIALIRDFDDRGNVISLMTERLSH
Ga0184610_107351323300017997Groundwater SedimentVAIPPDSEVAEEPAPGSAERLSYLDAGGRLASRETAQFAVVRDFDDRGNVISLMTERLTH
Ga0184610_121936113300017997Groundwater SedimentMAPPPDSEVAEEPAPGSAERLSYLDAGGRIASRETAQFAVVRDFDDYGNVISLMTERLTH
Ga0184604_1000973933300018000Groundwater SedimentAIPPDSEVAEEPAPGSAERLSYLDAGGRLASRETAQFAVVRDFDDRGNVISLITERLTH
Ga0184605_1019494613300018027Groundwater SedimentVAIPPDSEVAEEPAPGSAERLSYLDAGGRLASRETAQFAVVRDFDDRGNVISLITERLTH
Ga0184608_1015203713300018028Groundwater SedimentVAIPPDSEVAEEPAPGSAERLSYLDAGGRLASRETAQLAVFRDFDDRGNVISLITERLTH
Ga0184634_1004782233300018031Groundwater SedimentMPVATPPDSEAAQEPAPGSGERVFFLDAGGRLAPRETAQFAVVRDFDEQGNVISLMTERLSR
Ga0184638_101700223300018052Groundwater SedimentVATPSETEVVQEPMSGGMQRLSYLDAGGRPVSRESASIALIRDFDDRGNVISLMTERLSH
Ga0184621_1019050023300018054Groundwater SedimentCASPRGGMPVAIPPDSEVAEEPAPGSAERLSYLDAGGRLASRETAQFAVVRDFDDRGNVISLITERLTH
Ga0184623_1037476013300018056Groundwater SedimentVAIPPDSEVAEEPAPGSAERLSYLDAGGRIASRETAQFAVVRDFDDYGNVISLMTERLSR
Ga0184619_1031141013300018061Groundwater SedimentMPVAIPPDSEVAEEPAPGSAERLSYLDAGGRLASRETAQLAVFRDFDDRGNVISLITERLTH
Ga0184619_1043858713300018061Groundwater SedimentVAIPPDSEVAEEPAPGSAERLSYLDAGGRLASRETAQFAVVRDFDDRGNVISLITE
Ga0184637_10001009203300018063Groundwater SedimentVATPTETEVTQEPMSGGMQRLSFLDAGGHPVSKERASIALIRDFDDRGNVISLMTERLSH
Ga0184624_1031752623300018073Groundwater SedimentASPRGGMPVAIPPDSEVAEEPAPGSAERLSYLDAGGRLASRETAQFAVVRDFDDRGNVISLMTERLTH
Ga0184609_1000430823300018076Groundwater SedimentVAPPPDSEVAEEPAPGSAERLSYLDAGGRIASRETAQFAVVRDFDDYGNVISLMTERLTH
Ga0184609_1001878333300018076Groundwater SedimentMPVATPPDSEAAQEPAPGSGERVFYLDAGGRLASRETAQLAVVRDFDDYGNVI
Ga0190275_1031583823300018432SoilVAIPPDSEVAEEPAPGSAERLSYLDAGGRLASRETAQFAVVRDFDDHGNVISLITERLTH
Ga0190269_1046391713300018465SoilVAISPDSEVAEEPAPGSAERLSYLDAGGRLASRETAQFAVVRDFDDRGNVISLITERLTH
Ga0190269_1201847313300018465SoilMPVAPPPDSEVAEEPAPGSAERLSYLDAGGRLASRETAQFAVVRDVDDRGNVSSLMTERLTH
Ga0190274_1002602413300018476SoilPDSEVAEEPAPGSAERLSYLDAGGRLASRETAQFAVVRDFDDHGNVISLITERLTH
Ga0190274_1244025513300018476SoilMPVATPPDSEVAEEPAPGSAERLSYLDAGGRIASRETAQFAVVRDFDDYGNVISLMTERLTH
Ga0190274_1359689713300018476SoilVAIPPDSEVAEEPAPGSAERLSYLDAGGRLVPRETAQFAVVRDFDDHGNVISLITERLTH
Ga0190271_1315781923300018481SoilVAPPPDSEVAEEPAPGSAERLSYLDAGGRLASRETAQFAVVRDFDDRGNVISLMTERLTH
Ga0190273_1076475413300018920SoilVAIPPDSEVAEEPAPGSAERLSYLDAGGRLASRETAQFAVVRDFDDYGNVISLMTERLTR
Ga0184645_101162023300019233Groundwater SedimentVCASPRGGMPVAPPPDSEVAEEPAPGSAERLSYLDAGGRIASRETAQFAVVRDFDDYGNVISLMTERLTH
Ga0184645_106829213300019233Groundwater SedimentMPVATPPDSEAAQEPAPGSGERVFYLDAGGRLASRETAQLAVVRDFDDYGNVISLMTERLSR
Ga0184641_104630513300019254Groundwater SedimentSCASPRGGMPVAIPPDSEVAEEPAPGSAERLSYLDAGGRLASRETAQFAVVRDFDDHGNVISLMTERLAR
Ga0184646_115133413300019259Groundwater SedimentASCASPRGGMPVAIPPDSEVAEEPAPGSAERLSYLDAGGRLASRETAQFAVVRDFDDRGNVISLITERLTH
Ga0184644_129890423300019269Groundwater SedimentMPVAIPPDSEVAEEPAPGSAERLSYLDAGGRLASRETAQFAVVRDFDDRGNVISLITERLTH
Ga0193705_109953713300019869SoilRGGMPVAIPPDSEVAEEPAPGSAERLSYLDAGGRLASRETAQLAVFRDFDDRGNVISLITERLTH
Ga0193741_109262613300019884SoilGMPVAPPPDSEVAEEPAPGSAERLSYLDAGGRLASRETAQFAVVRDFDDRGNVISLMTERLTH
Ga0193739_100659333300020003SoilVATPPDSEVAEEPAPGSAERLSYLDAGGRIASRETAQFAVVRDFDDYGNVISLMTERLTH
Ga0193697_109765713300020005SoilYTVRASCASPRGGMPVAIPPDSEVAEEPAPGSAERLSYLDAGGRLASRETAQFAVVRDFDDRGNVISLITERLTH
Ga0222625_160311913300022195Groundwater SedimentPVATPPDSEVAEEPAPGSAERLSYLDAGGRIASRETAQFAVVRDFDDYGNVISLMTERLT
Ga0193714_103588213300023058SoilMPVAIPPDSEVAEEPAPGSAERLSYLDAGGRLASRETAQLAVFRDFDDRGNVISLITERLTR
Ga0207708_1103714123300026075Corn, Switchgrass And Miscanthus RhizosphereSCASPRGGMPVAIPPDSEVAEEPAPGSAERLSYLDAGGRLASRETAQFAVVRDFDDRGNVISLITERLTH
Ga0208070_10120213300026665SoilVASPPDSEVAEEPAPGGAERLSYLDAGGRLASRETAQFAVVRDFDDHGNVISLMTERLAR
Ga0208581_10058013300026704SoilVAIPPDSEVAEEPAPGGAERLSYLDAGGRLASRETAQFAVVRDFDDHGNVISLITERLTH
Ga0209896_102807523300027006Groundwater SandMPVATPPDSEAAQEPAPGSGERVFFLDAGGRLAPRETAQFAVVRDFDEHGNVISLMTERLSR
Ga0209877_101197213300027032Groundwater SandMPVATPPDSEAAQEPAPGSGERVFFLDAGGRLASRETAQFAVVRDFDEHGNVISLMTERLSR
Ga0209879_100147133300027056Groundwater SandMPVATPPDSEAAQEPAPGGAERVSYLDAGGRLVSRETAQFAVVRDFDEQGNVISLMTERLSR
Ga0209874_111742623300027577Groundwater SandAQEPAPGGAERVSYLDAGGRLVSRETAQFAVVRDFDEQGNVISLMTERLSR
Ga0209795_1008968623300027718AgaveMPVATPPDSEAAQEPGPGSGERVFFLDAGGRLVPRETAQFAVVRDFDDDGNVISLMTERLSR
Ga0209461_1001462913300027750AgaveMPVATPPDSEAAQEPGPGDGERVFFLDAGGRLVPRETAQFAVVRDFDDDGNVISLMTERLSR
Ga0209461_1004445613300027750AgaveVATPADSEAAQEPAPAILERLSYLDAGGRLVPREAAQFAVIRDFDDDGNVISFMTERLHH
Ga0209814_10000032343300027873Populus RhizosphereVAIPPDSEVAEEPAPGSAERLSYLDAGGRLASRETAQFAVVRDFDDDGNVISLMTERLAR
Ga0209486_1090717323300027886Agricultural SoilMPVAIPPDSEVAEEPAPGSAERLSYLDAGGRLASRETAQFAVVRDFDDRGNVISLMTERLTH
Ga0209868_100842013300027947Groundwater SandAAADGGGMPVATPPDSEAAQEPAPGSGERVFFLDAGGRLAPRETAQFAVVRDFDEQGNVISLMTERLSR
Ga0247818_1010211313300028589SoilPVAIPPDSEVAEEPAPGSAERLSYLDAGGRLASRETAQFAVVRDFDDRGNVISLMTERLT
Ga0247823_1079608423300028590SoilMPVAIPPDSEMAEEPAPGSAERLSYLDAGGRLASRETAQFAVVRDFDDRGNVISLITERLTH
Ga0307291_101167513300028707SoilVAIPPDSEVAEEPAPGSAERLSYLDAGGRLASRETAQFAVVRDFDDRGNVI
Ga0307301_1004384913300028719SoilVATPPDSEVAQEPIPGGLQRLYYLDAGGRPAPRESAQVAVIRDFDDYGNVISLVTERLSG
Ga0307282_1001100613300028784SoilVATPADSDAALDPAPAIAQRVSYLDAGGSVVPREAAQFAVIRDFDDQGNVISFMTERLSH
Ga0307299_1001483433300028793SoilSPRGGMPVAIPPDSEVAEEPAPGSAERLSYLDAGGRLASRETAQLAVFRDFDDRGNVISLITERLTH
Ga0247825_1002939353300028812SoilPVAIPPDSEVAEEPAPGSAERLSYLDAGGRLASRETAQFAVVRDFDDRGNVISLITERLT
Ga0307296_1030400513300028819SoilVAAPPDTEVAQEPESGGLQRLSFLDAGGQPATRERAAIALIRDFDDRGNVISLMTERLSH
Ga0307310_1049465813300028824SoilVATPADSDAALDPAPAIAQRVSYLDAGGSVVPREAAQFAVIRYFDDQGNVISFMTERLSH
Ga0307278_10000161203300028878SoilVATPSDSEVAQEPIPGGLQRLSYLDAGGRPASRESARVAVIRDFDDYGNVISLVTERLSG
Ga0307278_1000031473300028878SoilVAIPPDSEVAEEPAPGSAERLSYLDAGGRLAPRETAQFAVVRDFDDRGNVISLITERLAR
Ga0307278_1000351733300028878SoilVAIPPDSEVAEEPAPGSAERLSYLDAGGRIAPPETAQFAVFRDFDDRGNVISLITERLTH
Ga0307277_1048222423300028881SoilVATPPDSEVAQEPIPGGLQRLSYLDAGGRPASRESARVAVIRDFDDYGNVISLVTERLSG
Ga0307308_1027344413300028884SoilATSAPERRGTGRGGQPVAAPPDTEVAQEPESGGLQRLSFLDAGGQPATRERAAIALIRDFDDRGNVISLMTERLSH
Ga0247826_1033061423300030336SoilMPVATPPDSEVAQEPIPGGLQRLYYLDARGRPAPRESAQVAVIRDFDDYGNVISLVTERLSG
Ga0268240_1014927513300030496SoilIPPDSEVAEEPAPGSAERLSYLDAGGRLAPRETAQFAVVRDFDDRGNVISLITERLTR
Ga0268258_1010456913300030502AgaveVAIPPDSEVAEEPAPGSAERLSYLDAGGRVASRETAQFAVVRDFDDRGNVISLITERLTH
Ga0268242_102883813300030513SoilVALPPDSEVVEEPAPGSAERLSYLDAGGRLASRETAQFAVVRDFDDRGNVISLITERLTH
Ga0268255_1015993913300030516AgaveDSEVAEEPAPGSAERLSYLDAGGRLASRETAQFAVVRDFDDHGNVISLITERLTH
Ga0308202_102752623300030902SoilMPEAIPPDSEVAEEPAPGSAERLSYLDAGGRLASRETAQFAVVRDFDDRGNVISLITERLTH
Ga0308206_113606313300030903SoilVATPPDSEVAQEPIPGGLQRLYFLDAGGRPAPRESAQVAVIRDFDDYGNVISLVTERLSG
Ga0308204_1027789923300031092SoilPRGGMPVAIPPDSEVAEEPAPGSAERLPYLDAGGRLASRDTAQFAVVRDFDEDGNVISLMTERLSR
Ga0308199_115180913300031094SoilLSKPRRRWYTVRASCASPRGGMPVAIPPDSEVAEEPAPGSAERLSYLDAGGRLASRETAQFAVVRDFDDHGNVISLMTERLAR
Ga0307408_10001606733300031548RhizosphereVAVPPDSEVAEEPAPGSAERLSYLDAGGRLAPRETAQFAVVRDFDDRGNVISLITERLTH
Ga0307408_10103764813300031548RhizosphereSCAPPRGGMPVAIPPDSEVAEEPAPGGAERLSYLDAGGRLASRETAQFAVVRDFDDHGNVISLMTERLAR
Ga0307405_1023122223300031731RhizosphereVALPPDSETVEEPAPGSAERLSYLDAGGRLASRETAQFAVVRDFDDRGNVISLITERLTH
Ga0307405_1080782713300031731RhizosphereMPVAIPPDSEEAQEPAPGGERVLYLDAVGQLVSRETAQFAVGRDFDEHGNVISLMTERLS
Ga0307413_1052374513300031824RhizosphereMPVAVPPDSEVAEEPAPGSAERLSYLDAGGRLAPRETAQFAVVRDFDDRGNVISLITERLTH
Ga0307413_1168232313300031824RhizosphereLPRGGMPVALPPDSETVEEPAPGSAERLSYLDAGGRLASRETAQFAVVRDFDDRGNVISLITERLTH
Ga0307413_1168828123300031824RhizosphereVAIPPDSEVAEEPAPGSAERLSYLDAGGRLAPRETAQFAVVRDFDDRGNVISLITERLSH
Ga0307410_1018766523300031852RhizosphereMPVAIPPDSEEAQEPAPGGERVLYLDAGGQLVSRETAQFAVGRDFDEHGNVISLMTERLS
Ga0307406_1023413213300031901RhizosphereRREPVALPPDSETVEEPAPGSAERLSYLDAGGRLASRETAQFAVVRDFDDRGNVISLITERLTH
Ga0307412_1001051673300031911RhizosphereRGGMPVAIPPDSEVAEEPAPGSAERLSYLDAGGRLAPRETAQFAVVRDFDDRGNVISLITERLTH
Ga0307412_1070063913300031911RhizosphereMPVAIPPDSEVAEEPAPGSAERLSYLDAGGRLASRETAQFAVVRDFDDHGNVISLITERLTH
Ga0307416_10191258913300032002RhizosphereMPVAIPPDSEVAEEPAPGSAERLSYLDAGGRLAPRETAQFAVVRDFDDRGNVISLITERLSH
Ga0307416_10266074523300032002RhizosphereMPVALPPDSETVEEPAPGSAERLSYLDAGGRLASRETAQFAVVRDFDDRGNVISLITERLTH
Ga0334909_037392_130_3183300033988SoilMPVAIPPDSEVAEEPAPGGAERLSYLDAGGRLASRETAQFAVVRDFDDHGNVISLMTERLTR
Ga0364945_0108764_594_7823300034115SedimentMPVAIPPDSEVAEEPAPGSAERLSYLDAGGRLASRETAQFAVVRDFDDRGNVISLMTERLAH
Ga0334913_003111_3936_41243300034172Sub-Biocrust SoilMPVATPPDSEAAQEPGPGSGERVFFLDAGGRLVPRETAQFAVVRDFDEDGNVISLMTERLSR
Ga0334921_156818_105_2933300034220Hypolithic BiocrustMPVAIPPDSEVAEEPAPGSAERLSYLDAGGRVASRETAQFAVVRDFDDRGNVISLITERLTH
Ga0334931_017573_276_4643300034377Sub-Biocrust SoilMPVAIPPDSEVAEEPAPGGAERLSYLDAGGRLASRETAQFAVVRDFDDRGNVISLITERLTH


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.