Metagenome / Metatranscriptome Family F029302

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F029302
Family Type	Metagenome / Metatranscriptome
Number of Sequences	188
Average Sequence Length	61 residues
Representative Sequence	LSLASSLLASFAGKDYTNFRRARARTPRISHGCYTLVLLAKASPLPFIATKGLTEENP
Number of Associated Samples	97
Number of Associated Scaffolds	188

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	65.95 %
% of genes near scaffold ends (potentially truncated)	54.79 %
% of genes from short scaffolds (< 2000 bps)	96.81 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.28

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (94.681 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere (76.064 % of family members)
Environment Ontology (ENVO)	Unclassified (92.553 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant surface (85.638 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.70% β-sheet: 0.00% Coil/Unstructured: 59.30%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.28
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.28
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 188 Family Scaffolds
PF04195	Transposase_28	0.53

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.68 %
All Organisms	root	All Organisms	5.32 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.68 %
cellular organisms	root	All Organisms → cellular organisms	4.79 %
Viruses	superkingdom	All Organisms → Viruses	0.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.68 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	4.79 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.68 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	4.79 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.68 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	4.79 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.68 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	4.79 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.68 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	4.79 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.68 %
Tracheophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta	4.79 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.68 %
Euphyllophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta	4.79 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.68 %
Spermatophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta	4.79 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.68 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	4.79 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.68 %
Mesangiospermae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae	4.79 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.68 %
Liliopsida	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida	4.79 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.68 %
Petrosaviidae	subclass	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae	4.79 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.68 %
commelinids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids	4.79 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.68 %
Poales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales	4.79 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.68 %
Poaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	4.79 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.68 %
PACMAD clade	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade	4.79 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.68 %
Panicoideae	subfamily	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae	4.79 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.68 %
Panicodae	no rank	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae	4.79 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.68 %
Paniceae	tribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae	4.79 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.68 %
Panicinae	subtribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae	4.79 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.68 %
Panicum	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	4.79 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.68 %
Panicum sect. Hiantes	section	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes	3.72 %
Panicum miliaceum	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	1.06 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.68 %
Panicum virgatum	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	3.72 %
Panicum miliaceum	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	1.06 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.53 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005445\|Ga0070708_102181424	Not Available	512	Open in IMG/M
3300005841\|Ga0068863_101316178	Not Available	729	Open in IMG/M
3300009976\|Ga0105128_112955	Not Available	599	Open in IMG/M
3300009980\|Ga0105135_108762	Not Available	744	Open in IMG/M
3300009981\|Ga0105133_124221	Not Available	553	Open in IMG/M
3300009989\|Ga0105131_127521	Not Available	594	Open in IMG/M
3300009992\|Ga0105120_1041047	Not Available	571	Open in IMG/M
3300009995\|Ga0105139_1119266	Not Available	512	Open in IMG/M
3300009995\|Ga0105139_1119714	Not Available	511	Open in IMG/M
3300010371\|Ga0134125_11608627	Not Available	707	Open in IMG/M
3300010371\|Ga0134125_12629040	Not Available	547	Open in IMG/M
3300010396\|Ga0134126_12391785	Not Available	575	Open in IMG/M
3300010397\|Ga0134124_12600668	Not Available	549	Open in IMG/M
3300010400\|Ga0134122_10853417	Not Available	875	Open in IMG/M
3300010400\|Ga0134122_11658603	Not Available	666	Open in IMG/M
3300010401\|Ga0134121_12735509	Not Available	539	Open in IMG/M
3300014968\|Ga0157379_12007550	Not Available	572	Open in IMG/M
3300014968\|Ga0157379_12474673	Not Available	519	Open in IMG/M
3300015270\|Ga0182183_1007798	Not Available	1032	Open in IMG/M
3300015270\|Ga0182183_1085299	Not Available	521	Open in IMG/M
3300015273\|Ga0182102_1003338	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	981	Open in IMG/M
3300015273\|Ga0182102_1028820	Not Available	577	Open in IMG/M
3300015273\|Ga0182102_1037844	Not Available	535	Open in IMG/M
3300015278\|Ga0182099_1032405	Not Available	635	Open in IMG/M
3300015278\|Ga0182099_1055747	Not Available	546	Open in IMG/M
3300015278\|Ga0182099_1062219	Not Available	529	Open in IMG/M
3300015278\|Ga0182099_1072329	Not Available	506	Open in IMG/M
3300015293\|Ga0182103_1011390	Not Available	973	Open in IMG/M
3300015293\|Ga0182103_1092122	Not Available	525	Open in IMG/M
3300015293\|Ga0182103_1100814	Not Available	507	Open in IMG/M
3300015301\|Ga0182184_1086608	Not Available	531	Open in IMG/M
3300015306\|Ga0182180_1036652	Not Available	706	Open in IMG/M
3300015309\|Ga0182098_1057009	Not Available	668	Open in IMG/M
3300015309\|Ga0182098_1126281	Not Available	505	Open in IMG/M
3300015310\|Ga0182162_1063834	Not Available	654	Open in IMG/M
3300015310\|Ga0182162_1068485	Not Available	638	Open in IMG/M
3300015310\|Ga0182162_1126013	Not Available	508	Open in IMG/M
3300015311\|Ga0182182_1059318	Not Available	652	Open in IMG/M
3300015312\|Ga0182168_1064037	Not Available	672	Open in IMG/M
3300015312\|Ga0182168_1083138	Not Available	612	Open in IMG/M
3300015312\|Ga0182168_1088333	Not Available	598	Open in IMG/M
3300015312\|Ga0182168_1101386	Not Available	567	Open in IMG/M
3300015312\|Ga0182168_1115019	Not Available	539	Open in IMG/M
3300015312\|Ga0182168_1125369	Not Available	521	Open in IMG/M
3300015313\|Ga0182164_1035320	Not Available	823	Open in IMG/M
3300015313\|Ga0182164_1042688	Not Available	773	Open in IMG/M
3300015313\|Ga0182164_1072221	Not Available	644	Open in IMG/M
3300015313\|Ga0182164_1094969	Not Available	581	Open in IMG/M
3300015313\|Ga0182164_1109089	Not Available	551	Open in IMG/M
3300015313\|Ga0182164_1111753	Not Available	546	Open in IMG/M
3300015315\|Ga0182120_1050120	Not Available	738	Open in IMG/M
3300015315\|Ga0182120_1080706	Not Available	622	Open in IMG/M
3300015315\|Ga0182120_1083695	Not Available	613	Open in IMG/M
3300015315\|Ga0182120_1089961	Not Available	597	Open in IMG/M
3300015315\|Ga0182120_1106927	Not Available	559	Open in IMG/M
3300015316\|Ga0182121_1026949	Not Available	942	Open in IMG/M
3300015316\|Ga0182121_1066020	Not Available	691	Open in IMG/M
3300015316\|Ga0182121_1087150	Not Available	622	Open in IMG/M
3300015316\|Ga0182121_1112932	Not Available	560	Open in IMG/M
3300015316\|Ga0182121_1135510	Not Available	519	Open in IMG/M
3300015318\|Ga0182181_1077796	Not Available	578	Open in IMG/M
3300015318\|Ga0182181_1116025	Not Available	502	Open in IMG/M
3300015319\|Ga0182130_1084593	Not Available	603	Open in IMG/M
3300015319\|Ga0182130_1114847	Not Available	539	Open in IMG/M
3300015320\|Ga0182165_1057949	Not Available	719	Open in IMG/M
3300015324\|Ga0182134_1061803	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum miliaceum	702	Open in IMG/M
3300015324\|Ga0182134_1110991	Not Available	564	Open in IMG/M
3300015325\|Ga0182148_1040346	Not Available	798	Open in IMG/M
3300015327\|Ga0182114_1123212	Not Available	565	Open in IMG/M
3300015328\|Ga0182153_1109074	Not Available	575	Open in IMG/M
3300015328\|Ga0182153_1135851	Not Available	527	Open in IMG/M
3300015328\|Ga0182153_1137908	Not Available	524	Open in IMG/M
3300015329\|Ga0182135_1067676	Not Available	693	Open in IMG/M
3300015329\|Ga0182135_1143161	Not Available	519	Open in IMG/M
3300015329\|Ga0182135_1148754	Not Available	511	Open in IMG/M
3300015330\|Ga0182152_1041595	Not Available	823	Open in IMG/M
3300015331\|Ga0182131_1081609	Not Available	651	Open in IMG/M
3300015331\|Ga0182131_1103917	Not Available	593	Open in IMG/M
3300015332\|Ga0182117_1126652	Not Available	571	Open in IMG/M
3300015332\|Ga0182117_1166179	Not Available	507	Open in IMG/M
3300015333\|Ga0182147_1147543	Not Available	533	Open in IMG/M
3300015333\|Ga0182147_1157560	Not Available	518	Open in IMG/M
3300015334\|Ga0182132_1111438	Not Available	600	Open in IMG/M
3300015334\|Ga0182132_1111505	Not Available	600	Open in IMG/M
3300015335\|Ga0182116_1031065	Not Available	996	Open in IMG/M
3300015335\|Ga0182116_1049673	Not Available	847	Open in IMG/M
3300015335\|Ga0182116_1121797	Not Available	597	Open in IMG/M
3300015335\|Ga0182116_1135552	Not Available	570	Open in IMG/M
3300015335\|Ga0182116_1147921	Not Available	549	Open in IMG/M
3300015335\|Ga0182116_1171659	Not Available	512	Open in IMG/M
3300015336\|Ga0182150_1023893	Not Available	1012	Open in IMG/M
3300015336\|Ga0182150_1036755	Not Available	883	Open in IMG/M
3300015336\|Ga0182150_1128278	Not Available	560	Open in IMG/M
3300015337\|Ga0182151_1049346	Not Available	799	Open in IMG/M
3300015337\|Ga0182151_1073454	Not Available	693	Open in IMG/M
3300015337\|Ga0182151_1105444	Not Available	606	Open in IMG/M
3300015337\|Ga0182151_1108726	Not Available	598	Open in IMG/M
3300015338\|Ga0182137_1121856	Not Available	595	Open in IMG/M
3300015338\|Ga0182137_1137772	Not Available	564	Open in IMG/M
3300015339\|Ga0182149_1166334	Not Available	512	Open in IMG/M
3300015340\|Ga0182133_1061521	Not Available	802	Open in IMG/M
3300015340\|Ga0182133_1098299	Not Available	669	Open in IMG/M
3300015340\|Ga0182133_1110553	Not Available	638	Open in IMG/M
3300015340\|Ga0182133_1157344	Not Available	549	Open in IMG/M
3300015349\|Ga0182185_1176393	Not Available	642	Open in IMG/M
3300015349\|Ga0182185_1191441	Not Available	617	Open in IMG/M
3300015349\|Ga0182185_1261252	Not Available	528	Open in IMG/M
3300015350\|Ga0182163_1142489	Not Available	743	Open in IMG/M
3300015350\|Ga0182163_1161672	Not Available	698	Open in IMG/M
3300015350\|Ga0182163_1197615	Not Available	630	Open in IMG/M
3300015352\|Ga0182169_1105840	Not Available	903	Open in IMG/M
3300015352\|Ga0182169_1106355	Not Available	901	Open in IMG/M
3300015352\|Ga0182169_1120014	Not Available	850	Open in IMG/M
3300015352\|Ga0182169_1174215	Not Available	703	Open in IMG/M
3300015352\|Ga0182169_1180516	Not Available	690	Open in IMG/M
3300015352\|Ga0182169_1184004	Not Available	683	Open in IMG/M
3300015352\|Ga0182169_1213569	Not Available	630	Open in IMG/M
3300015353\|Ga0182179_1109774	Not Available	833	Open in IMG/M
3300015353\|Ga0182179_1171267	Not Available	683	Open in IMG/M
3300015353\|Ga0182179_1171371	Not Available	683	Open in IMG/M
3300015353\|Ga0182179_1172656	Not Available	681	Open in IMG/M
3300015353\|Ga0182179_1252634	Not Available	569	Open in IMG/M
3300015354\|Ga0182167_1119741	Not Available	969	Open in IMG/M
3300015354\|Ga0182167_1149730	Not Available	861	Open in IMG/M
3300015354\|Ga0182167_1233350	Not Available	667	Open in IMG/M
3300015354\|Ga0182167_1313705	Not Available	554	Open in IMG/M
3300017408\|Ga0182197_1059702	Not Available	717	Open in IMG/M
3300017408\|Ga0182197_1107367	Not Available	575	Open in IMG/M
3300017412\|Ga0182199_1072915	Not Available	747	Open in IMG/M
3300017412\|Ga0182199_1137031	Not Available	590	Open in IMG/M
3300017414\|Ga0182195_1034466	Not Available	1004	Open in IMG/M
3300017414\|Ga0182195_1213169	Not Available	511	Open in IMG/M
3300017422\|Ga0182201_1113960	Not Available	547	Open in IMG/M
3300017432\|Ga0182196_1061168	Not Available	696	Open in IMG/M
3300017432\|Ga0182196_1076021	Not Available	646	Open in IMG/M
3300017435\|Ga0182194_1077884	Not Available	649	Open in IMG/M
3300017435\|Ga0182194_1103839	Not Available	584	Open in IMG/M
3300017439\|Ga0182200_1158168	Not Available	509	Open in IMG/M
3300017445\|Ga0182198_1116152	Not Available	626	Open in IMG/M
3300017447\|Ga0182215_1127192	Not Available	579	Open in IMG/M
3300017693\|Ga0182216_1054576	Not Available	868	Open in IMG/M
3300017693\|Ga0182216_1101595	Not Available	689	Open in IMG/M
3300017693\|Ga0182216_1135141	Not Available	616	Open in IMG/M
3300017694\|Ga0182211_1074700	Not Available	785	Open in IMG/M
3300017694\|Ga0182211_1144521	Not Available	565	Open in IMG/M
3300020223\|Ga0182118_114100	Not Available	518	Open in IMG/M
3300025972\|Ga0207668_11887606	Not Available	539	Open in IMG/M
3300026095\|Ga0207676_12177319	Not Available	553	Open in IMG/M
3300028050\|Ga0268328_1053113	Not Available	563	Open in IMG/M
3300028058\|Ga0268332_1063542	Not Available	547	Open in IMG/M
3300028061\|Ga0268314_1014627	Not Available	791	Open in IMG/M
3300028061\|Ga0268314_1050989	Not Available	514	Open in IMG/M
3300028064\|Ga0268340_1028780	Not Available	743	Open in IMG/M
3300028064\|Ga0268340_1044147	Not Available	644	Open in IMG/M
3300028141\|Ga0268326_1006308	Not Available	640	Open in IMG/M
3300028142\|Ga0268347_1006987	Not Available	814	Open in IMG/M
3300028142\|Ga0268347_1027865	Not Available	541	Open in IMG/M
3300028143\|Ga0268348_1024415	Not Available	515	Open in IMG/M
3300028150\|Ga0268343_1019527	Not Available	509	Open in IMG/M
3300028152\|Ga0268336_1027904	Not Available	521	Open in IMG/M
3300028153\|Ga0268320_1014555	Not Available	627	Open in IMG/M
3300028154\|Ga0268341_1029134	Not Available	518	Open in IMG/M
3300028246\|Ga0268351_1015044	Not Available	761	Open in IMG/M
3300028256\|Ga0268304_1003737	Not Available	783	Open in IMG/M
3300028262\|Ga0268310_1028491	Not Available	618	Open in IMG/M
3300028262\|Ga0268310_1037343	Not Available	565	Open in IMG/M
3300028381\|Ga0268264_11899171	Not Available	605	Open in IMG/M
3300028464\|Ga0268302_106329	Not Available	564	Open in IMG/M
3300028467\|Ga0268333_1012019	Not Available	532	Open in IMG/M
3300028470\|Ga0268307_1019424	Not Available	544	Open in IMG/M
3300028474\|Ga0268331_1011856	Not Available	658	Open in IMG/M
3300028526\|Ga0268339_1019291	Not Available	518	Open in IMG/M
3300032467\|Ga0214488_1003849	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	2304	Open in IMG/M
3300032469\|Ga0214491_1048462	All Organisms → Viruses → Predicted Viral	1020	Open in IMG/M
3300032514\|Ga0214502_1136660	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	940	Open in IMG/M
3300032551\|Ga0321339_1000082	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	5712	Open in IMG/M
3300032591\|Ga0214484_1000557	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	3591	Open in IMG/M
3300032757\|Ga0314753_1089630	Not Available	542	Open in IMG/M
3300032791\|Ga0314748_1049867	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	890	Open in IMG/M
3300032913\|Ga0314739_1051151	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	778	Open in IMG/M
3300032959\|Ga0314738_1031634	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	953	Open in IMG/M
3300032959\|Ga0314738_1038337	Not Available	871	Open in IMG/M
3300032966\|Ga0314722_1071514	Not Available	535	Open in IMG/M
3300033535\|Ga0314759_1094679	Not Available	934	Open in IMG/M
3300033535\|Ga0314759_1106933	Not Available	881	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	95.74%
Environmental	Environmental	4.26%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	95.74%
Terrestrial	Environmental → Terrestrial	4.26%

Habitat	Taxonomy	Distribution
Phyllosphere	Host-Associated → Plants → Phyllosphere	88.83%
Soil	Environmental → Terrestrial → Soil	4.26%
Unclassified	Host-Associated → Plants → Unclassified	3.72%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.60%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.60%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified	88.83%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	3.72%
Unclassified	Host-Associated → Plants → Unclassified → Unclassified	3.72%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.06%
Loam	Environmental → Terrestrial → Soil → Loam	0.53%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.53%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified	88.83%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	3.72%
Unclassified	Host-Associated → Plants → Unclassified → Unclassified → Unclassified	3.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.06%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.53%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.53%

Habitat	Taxonomy	Distribution
Switchgrass Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere	76.06%
Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Phyllosphere	12.77%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.72%
Switchgrass Associated	Host-Associated → Plants → Unclassified → Unclassified → Unclassified → Switchgrass Associated	3.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.60%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.06%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.53%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.53%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300009976	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_186 metaG	Host-Associated	Open in IMG/M
3300009980	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_219 metaG	Host-Associated	Open in IMG/M
3300009981	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_208 metaG	Host-Associated	Open in IMG/M
3300009989	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_197 metaG	Host-Associated	Open in IMG/M
3300009992	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_108 metaG	Host-Associated	Open in IMG/M
3300009995	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_227 metaG	Host-Associated	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015270	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015273	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015278	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015293	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015301	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015306	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015309	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015310	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015311	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015312	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015313	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015315	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015316	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015318	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015319	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015320	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015324	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015325	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015327	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015328	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015329	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015330	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015331	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015332	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015333	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015334	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015335	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015336	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015337	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015338	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015339	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015340	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015349	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015350	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015352	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015353	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015354	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300017408	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017412	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017414	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017422	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017432	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017435	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017439	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017445	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017447	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017693	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017694	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300020223	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_31MAY2016_LD2 MG	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028050	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_17JUL2017_LD1	Host-Associated	Open in IMG/M
3300028053	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_28AUG2017_LD1	Host-Associated	Open in IMG/M
3300028058	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_07AUG2017_LD1	Host-Associated	Open in IMG/M
3300028061	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_05JUN2017_LD1	Host-Associated	Open in IMG/M
3300028064	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_28AUG2017_LD1	Host-Associated	Open in IMG/M
3300028141	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_MAIN_17JUL2017_LD1	Host-Associated	Open in IMG/M
3300028142	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_28AUG2017_LD1	Host-Associated	Open in IMG/M
3300028143	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_18SEP2017_LD1	Host-Associated	Open in IMG/M
3300028150	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_MAIN_28AUG2017_LD1	Host-Associated	Open in IMG/M
3300028152	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_07AUG2017_LD1	Host-Associated	Open in IMG/M
3300028153	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_26JUN2017_LD1	Host-Associated	Open in IMG/M
3300028154	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_MAIN_28AUG2017_LD1	Host-Associated	Open in IMG/M
3300028246	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_MAIN_18SEP2017_LD1	Host-Associated	Open in IMG/M
3300028256	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_15MAY2017_LD1	Host-Associated	Open in IMG/M
3300028262	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_MAIN_05JUN2017_LD1	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028464	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_MAIN_15MAY2017_LD1	Host-Associated	Open in IMG/M
3300028467	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_MAIN_07AUG2017_LD1	Host-Associated	Open in IMG/M
3300028470	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_15MAY2017_LD1	Host-Associated	Open in IMG/M
3300028474	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_17JUL2017_LD1	Host-Associated	Open in IMG/M
3300028526	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_07AUG2017_LD1	Host-Associated	Open in IMG/M
3300032467	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_31MAY2016_LR2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032469	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_MAIN_12JUL2016_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032514	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_12SEP2016_LR2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032551	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_31MAY2016_LR2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032591	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_MAIN_31MAY2016_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032757	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_07AUG2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032791	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_07AUG2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032913	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_17JUL2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032959	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_26JUN2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032966	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_15MAY2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300033535	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_28AUG2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0070708_1021814241	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	LSLASSLLASLAGKDYTNFRRARARTPRKSHGCYTLVLLLRASPLPFISIRGLTEENP*
Ga0068863_1013161781	3300005841	Switchgrass Rhizosphere	LSLASSLLASFVRRNYTNLRRARARTPRKSHGRYTLVLLAKTSPLPFIATRRLAEGEPVNQQCTFHERIH
Ga0105128_1129552	3300009976	Switchgrass Associated	LSLASSLLAYFAGTNYTNLRRVRARTPRISHGWYTLVLLAKASSLPFIATRELAEGEPVTPQYTFHGRIYGS
Ga0105135_1087621	3300009980	Switchgrass Associated	LSLASSLLASFARKDYTNFRRARARTPNASHGFEILVLLAKASHPPFIATRGLTEDNS*
Ga0105133_1242211	3300009981	Switchgrass Associated	QGLLLSLASSLLASFARKDYINFRRARARTPNVSHSFRMMVLLAKTSHPPFIAARDLAGGQPVML*
Ga0105131_1275211	3300009989	Switchgrass Associated	MRFQGILLSLASSLLASFVGRNYTNLRRARARTPRKSHSRYTLVLLAKASPLTFIATKGLTEENP*
Ga0105120_10410471	3300009992	Switchgrass Associated	TRKSVLASFAGKDYTNFRRARARTPKISHGFYRLMLLAKASLPPFIATRGLTEENP*
Ga0105139_11192662	3300009995	Switchgrass Associated	LSLASSLLASFVGRNNTNFRRERARTPRISHGCYTLVLLIKASPLPFIATRELTKGEPVN
Ga0105139_11197142	3300009995	Switchgrass Associated	GKDYTNFRRARARTLRISHGRYTLVLLAKASPPPFIATKRLTEGEPVTLQCTNSRMHS*
Ga0134125_116086271	3300010371	Terrestrial Soil	IRWEHWVCRMRQQGLLLSLASSLLASFAGKDYRNFRRARVRTPNASHSFRMLVLLTRASHPPFIATRDLTGGQLVML*
Ga0134125_126290401	3300010371	Terrestrial Soil	QGLLLSLTSSLLASFVGKNYTNLRRARAKTPRKSHGCYTSVLLLRASPLPFIATKGLTEENP*
Ga0134126_123917851	3300010396	Terrestrial Soil	LSLASSLPASFDGKDYTNFRRVRARTPRISHGCYILVLLAKASPMPFIATRGLLKENP*
Ga0134124_126006681	3300010397	Terrestrial Soil	LSLASSLLASLAGKDYTNFRRARVRTPRISLGCYTLVLLIKASPLPFIAIRGLTEENP*
Ga0134122_108534171	3300010400	Terrestrial Soil	MRLQGLLLSLASSLLASFPGKNYTNLRRVRARTPRKSHGRYTLVLLVKDSLLPFIA
Ga0134122_116586031	3300010400	Terrestrial Soil	LSLASSLLASFARKDYTNFRRSRARIPRISHGCYTLVLLEKASPPPFIATRGLTEGEPVIQL
Ga0134121_127355092	3300010401	Terrestrial Soil	MRQQGVFLSLASSLLASFARKDYTSFRRARARTPKISHGFYTLVLPAKTSLPPFIATRDLTGGQPVTLQ*
Ga0157379_120075501	3300014968	Switchgrass Rhizosphere	LSLASSLLASLARKDYTNFRRARARTPRKSHGCYTSVLLLRTSPLPLIATWRLAEGEPVNQQ
Ga0157379_124746732	3300014968	Switchgrass Rhizosphere	LSLTSSLLASFAGNDYTNFRRARARKPKISHGFYLLLLLAKVSLPPFIATRDLTGGQPVTLQ*
Ga0182183_10077981	3300015270	Switchgrass Phyllosphere	LLLASSLLASFAGKNYTNLRRARARTPSKGHGCYTSVLLLRGSPLPFIATRRLAEGEPVNQQ
Ga0182183_10852991	3300015270	Switchgrass Phyllosphere	LSLANSLLASFVGKNYTNFRRARARTPKISHRFYTLVLLAKASLPPFIVTRDVIGGQPVTLQL*
Ga0182102_10033381	3300015273	Switchgrass Phyllosphere	LSLASSLLASCVGKDYTNFRRARARTPRISHGCYTLVLLAKVSLPPFIAARDLTGGQPVTLE*
Ga0182102_10288201	3300015273	Switchgrass Phyllosphere	SFAGKDYTNFRRVRARTPRISHGCYILVLLAKASPLPFIATRGLLKENP*
Ga0182102_10378441	3300015273	Switchgrass Phyllosphere	LSLASSLLASFVGKDYTNFRRARARTPNASHGFRMLVLLAKASHPPVRATRDLN*
Ga0182099_10324051	3300015278	Switchgrass Phyllosphere	LSLASSLLASFSGKNYTNLRRARARTPRKSHGCYTSVLLLRGSPLLFIATKGLTEENP*
Ga0182099_10557471	3300015278	Switchgrass Phyllosphere	LSLASSLLAFFVGKNYTNFRRARARTPNASHSFRMLVLLAKASHPPFIATRDLTGGQLVML*
Ga0182099_10622192	3300015278	Switchgrass Phyllosphere	LSLLSSLLASFAGKDYKSFRRARARTPKISHGFYTMVLLVKASLPPFIAARDVNGGQPVML*
Ga0182099_10723291	3300015278	Switchgrass Phyllosphere	GLLLSLASSLLVSFAGKNYINFRRERARTPKKGHGFYMLVLLANASLPPFIATRDFTGEQLVTLQLQHSRTQ*
Ga0182103_10113902	3300015293	Switchgrass Phyllosphere	MRLQGLLLSLASSLLASFVGRNYTNLRRARARTPSKGHGCYTSVLLLRGSSLPFIATKELTEENP*
Ga0182103_10921221	3300015293	Switchgrass Phyllosphere	LLLSLASSLLASFARKHYTNFRRARARTPKASHGCRLLVLLARVSHSLYIAAWGFTGELVML*
Ga0182103_11008141	3300015293	Switchgrass Phyllosphere	LSLASSLLASFAGKNYTNLRRARARTPRKNHGRYTLVLLAKASPLPFIATRELTEENP*
Ga0182184_10866081	3300015301	Switchgrass Phyllosphere	LASLAGKNYINLRRARTRTTRKSHGFYTSVLLLRASPLPFISIRGLTEENP*
Ga0182180_10366521	3300015306	Switchgrass Phyllosphere	MRYQGLLLSLASSLLPSFAGKDYTNFRRARARTPEINHDFYTLVLLAKASLPHFIATRDFTGGQLVML*
Ga0182098_10570091	3300015309	Switchgrass Phyllosphere	YQGLLLSLTSSLLTSFAGKNYTNFRRVRARTPKICHGFYMLVLLAKASLPPFIATRDSTGG*
Ga0182098_11262812	3300015309	Switchgrass Phyllosphere	LSLARSLLASSARKDYTNLRRARARTPYESHRFRILVLLAKASHLPFIVA
Ga0182162_10638342	3300015310	Switchgrass Phyllosphere	LPLANSLLASFAGKDYTNFRRVRARTPNASHSFRMLVLLAKASHPLFIAARDLTGGQPVMLQ*
Ga0182162_10684851	3300015310	Switchgrass Phyllosphere	LSLASSLLASFAGKDYTNLRREGARTPNASHSFRMLVLLAKASHLPFIVTRDLTGG*
Ga0182162_11260131	3300015310	Switchgrass Phyllosphere	LLLSLASSLLVSFVGKDYTNFRRTRARTPNASHSFRILVLLAKASHPSFIATRCLTEDNP
Ga0182182_10593182	3300015311	Switchgrass Phyllosphere	MRQQVLFLSLASSLLASFAAKDYTSFRRARARTPKISHGFYTMVLLVKASLPPFIAARDVNGGQPVMLQ*
Ga0182168_10640371	3300015312	Switchgrass Phyllosphere	RQHVLLLSLARSLLASFAGKDYTNFSRARARTPNASHSASMLVLLAKASHPPFIATRGLTGGQPMMQQW*
Ga0182168_10831381	3300015312	Switchgrass Phyllosphere	QQRLLLSLASSLLASFAGKNYTNLRRARARTPRKSHGCYTLVLLLRASPLPFISIKGAY*
Ga0182168_10883332	3300015312	Switchgrass Phyllosphere	LSLASSLLASFVGRNYTNLRRARARTPRKSHGRYTLVLLAKASPLPFIATRRLAEGEPMNQQCMFHGRIHDSIHG
Ga0182168_11013861	3300015312	Switchgrass Phyllosphere	LLLASSLLASFAGKNYTNLRRARARTPRKSHGCYTSVLLQRASPLPFIATRGLTEEN
Ga0182168_11150191	3300015312	Switchgrass Phyllosphere	SLASSLLASFAGKNYTNLRRARTPSKGHGCYTSVLLLRGSPLPFIATKGLTEENP*
Ga0182168_11253691	3300015312	Switchgrass Phyllosphere	MRLQGFLLSLASSLLASFAGKNYTNLRRARARTPRKSHGRYTLVLLVKASLLPFIATRRLAEGE
Ga0182164_10353202	3300015313	Switchgrass Phyllosphere	LSLASSLLASFARKDYTNFRRARARTPNASHGFEILVLLAKASHPPFIATRGLTEDNP*
Ga0182164_10426881	3300015313	Switchgrass Phyllosphere	LSLASSLLASFVGRNYTNLRRARARTPRISHGCYTLVLLAKASPQPFIATRELAEEEPVTQ*
Ga0182164_10722211	3300015313	Switchgrass Phyllosphere	LSLASSLLASFAGKDYTNFRRVRARTLNARHSFRMLVLLGKASHLPFIATRDLTGG
Ga0182164_10949691	3300015313	Switchgrass Phyllosphere	LSLASSLLVSFAGKDYINFRRARARTPKKGHGFYMLVLLANASLPPFIATRDFTGEQLVTL*
Ga0182164_11090892	3300015313	Switchgrass Phyllosphere	LPLANSLLASFAGKDYTNFRRVRARTPNASHSFRMLVLLAKASHPLFIAARDLTGGQPVML*
Ga0182164_11117531	3300015313	Switchgrass Phyllosphere	FAGKDYTNFRRARARTPKVSHGFYTLVLLAEASLPPFMATRDLTGGQFVMLQWQHSRTHSRTQ*
Ga0182120_10501201	3300015315	Switchgrass Phyllosphere	LSLVSSLLAFLAGKDCTNFKRARARTPRKSHGCYTSVLLLRTSPLPFIATRRLAEGEPVN
Ga0182120_10807061	3300015315	Switchgrass Phyllosphere	ASFAGKDYTNFRRARARTPNASHSFKMLVLMAKASHPPFIATRDLTRGQPMMLQWQQLQTQ*
Ga0182120_10836952	3300015315	Switchgrass Phyllosphere	LSLASYLLASFARKDYTNFRRERARTPRISHGCYTLVLLAKASPPPFIAARGLTEGEPVTLQ*
Ga0182120_10899612	3300015315	Switchgrass Phyllosphere	LSLASSLLASYVGKDYTNFRRARARTPEINHDFYTLVLLAKASLPHFIATRDFTRGQLVML*
Ga0182120_11069272	3300015315	Switchgrass Phyllosphere	GLLLSLASSLLSSFAGKHYTNFRRARARTPNASHSFRMLVLLAKASHPPFIAARDLTGGQPVMLQWQHSRMQ*
Ga0182120_11124301	3300015315	Switchgrass Phyllosphere	SFAGNDYTNFRRARARTPKISHGFYLLVLLAKVSLPPFIATRDLTGGQPVTLQ*
Ga0182121_10269492	3300015316	Switchgrass Phyllosphere	LSLASSLLASFVGKDYTNFRRAGARTPNVSHSFRILVLLAKASHPPFIATRDFTGG*
Ga0182121_10660201	3300015316	Switchgrass Phyllosphere	LSLASSLLASLAGKDYTNFRRARARTPRKSHGCYTSVLLLRTSPLPFIAIRRLAEGELMNQ*
Ga0182121_10871501	3300015316	Switchgrass Phyllosphere	ASSLLASFAGKNYTNLRRAIARAPRKSRGFYTSVLLLRASPLPFIAIRGLTEENP*
Ga0182121_11102051	3300015316	Switchgrass Phyllosphere	MRLQGFLLSLASSLLASFARKNNTNLRRARARTPRKSHDRYTLVLLAKASPLPF
Ga0182121_11129322	3300015316	Switchgrass Phyllosphere	LPLASSLLAPFAGKDYTNIRRARARIPRISHGCYTLVLLPKASLSPFIAVRGLTEGEPVTL*
Ga0182121_11355101	3300015316	Switchgrass Phyllosphere	RRQQRLLLSLASSHLASFVGRNYAKLRRARARTQRISHGCYTLVLLSKASPLPFIATRGAY*
Ga0182181_10777962	3300015318	Switchgrass Phyllosphere	LLLASSLLASFAGKDYTKFKRARARTPNASHSFRILVLLAKVSLSNFIATRDLTGGQPVMLQ*
Ga0182181_11160251	3300015318	Switchgrass Phyllosphere	LSLASSLLASFAGKDYTNFRRARVRTPNARHSFRMLVLLPKASHSPFIATRDTIGGQPVML*
Ga0182130_10845931	3300015319	Switchgrass Phyllosphere	ASFVRKNYTNLKRARARTPNASHSFRILVLLAKTSLPPFIVTRDYTGGQPVTLQWQHSRA
Ga0182130_11148471	3300015319	Switchgrass Phyllosphere	LSLASSLLASFAGKDYTNFRRARARTPRISHGRYTLVLLAKASPPPFIATKGLTEGEPVTLQ*
Ga0182165_10579491	3300015320	Switchgrass Phyllosphere	ASSLLASFVGKDYTNFRRARARTPRISHGRYTLVLLAKASLPPFIATKGLTEGELVTL*
Ga0182134_10618031	3300015324	Switchgrass Phyllosphere	LSLASSLLASFAGKDYTNIRRARARTRTPRISHGCYTLVLLVKASPPPFIATRGLTEGEPVTQ*
Ga0182134_11109911	3300015324	Switchgrass Phyllosphere	LSLVSSLLASFDGKDYKNLRKARGRIPNASHSFRILVLLVEASHPPFVAPRVLLEDDP*
Ga0182148_10403461	3300015325	Switchgrass Phyllosphere	LSLASSLLASFAGKDYTNFRRARARTPNASHSFRMLVLLAKASHPPFIAARDLTGGQPVMLQ*
Ga0182114_11232121	3300015327	Switchgrass Phyllosphere	LSLASSLLASFAGKDYTNFRRARARTPRISHGRYTLVLLAKASPPPFIATKGLTEGEPVTL*
Ga0182153_11090741	3300015328	Switchgrass Phyllosphere	LSLASSLLASFVGKNYTNFRRARARTPNASHSFRILMLLAKASLLPFIAARDCIGGQPVMLQ*
Ga0182153_11358511	3300015328	Switchgrass Phyllosphere	LSLASSLPASFDGKDYTNFRRVRARTLNARHSFRMLVLLAKASHLPFIATRDLTGG*
Ga0182153_11379082	3300015328	Switchgrass Phyllosphere	SLLASFAGKNYTNLRRARARTPRKSHGCYTSVFLLRASPLPFIATRALTEENL*
Ga0182135_10676761	3300015329	Switchgrass Phyllosphere	ASFVGKGYTNFRRAGARTPNVSHSFRILVLLAKASHPPFIATRDLTGGQPMMLQWQHSRA
Ga0182135_11431611	3300015329	Switchgrass Phyllosphere	LSLTSSLLASFAGKDYTNFRRARASTPNENHSFRMLVFLANTSHSPFIAAWGL
Ga0182135_11487541	3300015329	Switchgrass Phyllosphere	LPLASTLLASFAGKHYTTFRRARARTPKASLGFSLLVLLAKASDPPYIAAWASLGGQPVMLK*
Ga0182152_10415951	3300015330	Switchgrass Phyllosphere	LSLASSLLASFAGKDYTNFRRARVRTPRISHGCYTLVLLAKASPPPFIATRGLTEEEPVTLQ*
Ga0182131_10816092	3300015331	Switchgrass Phyllosphere	LSLASSLLASFAGKDYTNFRRARARTPNASHSFRILVLLAKASLPPFIAARDCTGGQPVML*
Ga0182131_11039171	3300015331	Switchgrass Phyllosphere	MRQQGLFLSLASSVLASFARKDYTNFRRARARTPNVSHGFRMLVFLAEASHPPFIATRDLTGG*
Ga0182117_11266521	3300015332	Switchgrass Phyllosphere	DMMSSMDPMRALGMQRLLLSLASSLLASFVGRNYVKFRRTRARTPRKSHGRYTLVLLPRASPLPFIATRGLTKENP*
Ga0182117_11661792	3300015332	Switchgrass Phyllosphere	MRYQGLLLSLASSLLTSFAGKDYTNFRRARARTPEINHDFYTLVLLAKASLPHFIATRDFTG
Ga0182147_11475431	3300015333	Switchgrass Phyllosphere	LSLASSLLASFAGKDYTNFRRARARTPNESHGFEMLVLLAKTSHPSFIATRGLTEDNP*
Ga0182147_11575601	3300015333	Switchgrass Phyllosphere	QRLLLSLASSLLASFAGKNYTNLRRARVRTPRKSHGCYTSVRLLRASPLPFISIRGLTEENP*
Ga0182132_11114381	3300015334	Switchgrass Phyllosphere	LSLASSLLASLAGKDYTNFRRARARTPRKSHGFYTSVLLLRASPLPFIATRGLTEENL*
Ga0182132_11115052	3300015334	Switchgrass Phyllosphere	SLTSSFLASFAGKDYTNFRRARARTTKISHSCYTLVLLAKASPPPFIATKGLTEGEPVTL
Ga0182116_10310652	3300015335	Switchgrass Phyllosphere	LSLASSLLASFAGKDYTNFRRARVRTPKISHGCYTLVLLAKASPPPFIATRGITEEEPVTLQ*
Ga0182116_10496731	3300015335	Switchgrass Phyllosphere	LSLASSLLASFVGKNYTNLRRVRARTPNASHSFRILVLLAKASYPPFIATTVLLEDNP*
Ga0182116_11217971	3300015335	Switchgrass Phyllosphere	LLLLLASSLLASFAGKNYTNLRRTRARTPSKGHGCYTLVLLLRVSPLPFIATKGLTEENP
Ga0182116_11355521	3300015335	Switchgrass Phyllosphere	MRQQGLLLSLASSLLASFAGKDYTNFRRARARTPNASHSFRMLVLLAKASHPPFIATRDLTGGQPVMLQWQHSRMQ*
Ga0182116_11479211	3300015335	Switchgrass Phyllosphere	GCRVWQKRLLLPLTSTLLTSFARKHYTTFRRARARTPNASHNFRILVLLAKTSHPSFIAAWGLTGGQPVMLQ*
Ga0182116_11716592	3300015335	Switchgrass Phyllosphere	LASSLLASFVGKNYTNPRRARAKTPRKSHGYYTSVLLLRASPLPFIATKGLTEENP*
Ga0182150_10238931	3300015336	Switchgrass Phyllosphere	LSLASSLLASFGGKDYTNFRRARARTPNASHSFRMLVLLAKASHPPFIATRVFLEDNP*
Ga0182150_10367551	3300015336	Switchgrass Phyllosphere	LLLASSLLASFAGKNYTNLRRARARTPSKCHGCYTSVLLLRGSPLPFIATKGLTKENP
Ga0182150_11282782	3300015336	Switchgrass Phyllosphere	MRLQELLLSLASSLLASFAGKNYTNLRRARARTPRKSHGHYTLVLLAKTSPLPFIATRRLAEGEPVNQQCTFHRRIHDSI
Ga0182151_10493462	3300015337	Switchgrass Phyllosphere	LASSLRASFAGKNYTNLRRARARTLRKSHGCYTLVLLLRASLLPFIATRGLTKENP*
Ga0182151_10734541	3300015337	Switchgrass Phyllosphere	LSLASSHLASFVGRNYAKLRRARARIPTISHGYYTLVLLSKASPLPFIATRGLADGEPVNQQCTFHVCIHG
Ga0182151_11054441	3300015337	Switchgrass Phyllosphere	ILSLVSFLLASVAGKDYTNFTRARARTPRISHGCYTLALLARASLPPFIATRGTTGDNP*
Ga0182151_11087262	3300015337	Switchgrass Phyllosphere	SLPSSLLASFVGKDYINFRRARARTPRIGHGRYTLVLLAKVSPLPFIATRGLTEGGTRD*
Ga0182137_11218561	3300015338	Switchgrass Phyllosphere	LSLASSLLASFDGKDYTNFRRVRARTPRISHGCYTLVLLAKASPLPFIA
Ga0182137_11377721	3300015338	Switchgrass Phyllosphere	LSLVSSLLASFVGKNYTNLRRARARTPNASHSFRILVLLVKASHPPFIATRGLTGGQP
Ga0182149_11663341	3300015339	Switchgrass Phyllosphere	SFFGRNYTNLMRARARTPRKSHGRYTLVLLAKASILPFIATRRLAEGEPVN*
Ga0182133_10615212	3300015340	Switchgrass Phyllosphere	MRLQGLLLSLASSLLASFVGKNYTNLRRARARTPRKIHGCYTSVILLRASPLPFIAIRGLTEENS*
Ga0182133_10982991	3300015340	Switchgrass Phyllosphere	MRLQELLLSLASSLLASFARKNYTNLRRARARTPRKSHGRYTLVLLVKASLLPFIATRRLAEGEPMNQ*
Ga0182133_11105532	3300015340	Switchgrass Phyllosphere	LASFAGMNYTNLKRARARAPRISHGCYTLVLLAKVSSLPFIATKGLTEETP*
Ga0182133_11573441	3300015340	Switchgrass Phyllosphere	RVWQQRLLLSLARSLLASFAGKDYTNLRRTRASASHSFIILVLLAKASHLPFIAARDLTGGQPVML*
Ga0182185_11763931	3300015349	Switchgrass Phyllosphere	SSLLPSFAGKDYTNFRRARARTPEINHDFYTLVLLAKASLPHFIATRDFTGGQLVML*
Ga0182185_11914411	3300015349	Switchgrass Phyllosphere	LLLSLASSLLASLAGKDYANFRRARARTPNASHSLVLLVKTSHPPFIATRGLTGGQHVMLQ*
Ga0182185_12612521	3300015349	Switchgrass Phyllosphere	LSLASSLLASFVGRNNTNFRRERARTPRISHGCYTLVLLIKASPLPFIATRELTKGEPVTQ*
Ga0182163_11424892	3300015350	Switchgrass Phyllosphere	LASFAGKDYTNFRRARARTPRISHGCYTLVLLAKTSPLPFIATRGLTEENP*
Ga0182163_11616722	3300015350	Switchgrass Phyllosphere	LSLTSSILASFAGTNYTNLRRARARTPRISHGCYTLVLLAKASSLLFIATRELAEGEPVTQ*
Ga0182163_11976152	3300015350	Switchgrass Phyllosphere	LSLASSLLASFAGKDYTNFRRARAKTPRISHGCYTLVLLAKASLPSFIATR
Ga0182169_11058401	3300015352	Switchgrass Phyllosphere	LSLASSLLASFAGKHYANFRRARARTPNTSHGFRVLVLLAKASHPPFIAAWGSTGGQPVMIQ*
Ga0182169_11063551	3300015352	Switchgrass Phyllosphere	LLSLASSLLASFAGKDYTNFRRARVRTPRISHGCYTLVLLAKASPPPFIATRGLTEEEPVTLQ*
Ga0182169_11200141	3300015352	Switchgrass Phyllosphere	LSFASSLLASLAGKDYTKFRRARTRTPRKSHGCYTLVLLAKASPLPFIATRRLAKGEPVNQQCTF
Ga0182169_11742152	3300015352	Switchgrass Phyllosphere	MRQQGLLLSLTSSLLASFAGKDYTNFWRARARTQNTSHSFRMLVLLPKVSHPPFISTRDLVGGE*
Ga0182169_11805161	3300015352	Switchgrass Phyllosphere	LSLASSLLASFAGKDYTNFRRARERTPNASHSFRMLVLLSKTSHPPFIAARGLTGGRPMMLQ
Ga0182169_11840042	3300015352	Switchgrass Phyllosphere	MRLQGFLLSLASSLLASFAGKNYTNLRRARARTPRKSHDRYTLVLLAKASPLPFIATRRLAEGEPVNQQC
Ga0182169_12135691	3300015352	Switchgrass Phyllosphere	LSLASSLLASLAGKDYTNFRRARVRTPRKSHGCYTLVLLAKASSLPFIATRGLTKETP
Ga0182179_11097741	3300015353	Switchgrass Phyllosphere	LSLASSLLESFARKDYTSFRRARARTPKISHGFYTLVLLVKTSLPPFIAKWDLTGGQPVTLQ*
Ga0182179_11712671	3300015353	Switchgrass Phyllosphere	WGCRVWQQRLHLPLASSLLASFAGKDHTNFKRARARTPNASHSFRVLVLLSKTSHPPFIGAWISTRG*
Ga0182179_11713711	3300015353	Switchgrass Phyllosphere	LSLASSFLASFARKDNTCFRRARARTPKISHGFYTLVLPAKTSLPPFIATRDLTGGQPVALQ*
Ga0182179_11726561	3300015353	Switchgrass Phyllosphere	LSLASPLLAYFVGRNYVKFRRARARTPRKSHGCYTSVLLLRAAPLPFIAIRGLTEEN
Ga0182179_12526342	3300015353	Switchgrass Phyllosphere	LSLTSSLLASFAGKDYTNFRRARARTRTPRISHGCYTLVLLVKASPPPFIATRGLTEGEPVTQ*
Ga0182167_11197411	3300015354	Switchgrass Phyllosphere	LSLASSLPASFAGKDYTNFRRVRARTLNARHSFRMLVLLAKASHLPFKATRDLTGG*
Ga0182167_11497301	3300015354	Switchgrass Phyllosphere	QGLLLSLTSSLLASFAGKDYTNFWRARARTQNASHSFRMLVLLPKVSHPPFISTRDLVGGE*
Ga0182167_12333502	3300015354	Switchgrass Phyllosphere	LSLASSLLGSFARKDYTKFRRARARTPNASHSFRMMVLLPKASHSPFIATRDTFG
Ga0182167_13137051	3300015354	Switchgrass Phyllosphere	RLLLSLASSLLAYFVGRNYVKFRRARTRTPRKSHSRYTLVLLAKTSPLPFIATRRLAEGEPVNQQCMFHG*
Ga0182197_10597021	3300017408	Switchgrass Phyllosphere	LSLASSLLASFARKDYTNFRRARARTPRISHGRYTLVLLAKASPPPFIATKGLTEGESVTLQCMHSRMHSWQCSWSDSRVQSRTQ
Ga0182197_11073671	3300017408	Switchgrass Phyllosphere	LSLASSLLASFAGKDYTNFRRAGARIPNASHDFRMLVLLAKVSHPPFIATRGLTGGQPVMPQW
Ga0182199_10729152	3300017412	Switchgrass Phyllosphere	SFAGKNYTNFRRARARTPRISHSCYTLVLLVRASFPLFIVTRDTTGGQLVML
Ga0182199_11370311	3300017412	Switchgrass Phyllosphere	RLLLSLASSLLASFVGRNYVKFRRARTRTPRKSHGCYTSVLLLRASPLPFIAIRGLTEEN
Ga0182195_10344662	3300017414	Switchgrass Phyllosphere	LSLASSLLASLAGKDYTNLRRTRVRTPRKSHGCYTLVLLAKASPLPFIATRGLTEETP
Ga0182195_12131691	3300017414	Switchgrass Phyllosphere	LASSLLASFVGRNYAKLRRARARTQRISHGCYTLVLLSKASPLPFIATRGAC
Ga0182201_11139601	3300017422	Switchgrass Phyllosphere	LSLAISLLVSFAGKDYTNFRRARARTPRISHGCYTLVLLAIAFLPPFIATRDTT
Ga0182196_10611681	3300017432	Switchgrass Phyllosphere	LLFSLASSLLASFVGKDYTNFRRARSRTPRISHGRYTLVLLAKASPPPFIATKGLTEGEPVTL
Ga0182196_10760212	3300017432	Switchgrass Phyllosphere	LSLASSLLASLARKDYTNLRRMRVRTPRKIHGSYTLVLLAKPSPLPFIVTRGLTEETP
Ga0182194_10778841	3300017435	Switchgrass Phyllosphere	LSLASSLLASFAGKDYTNFRRARARTPNESHGFEILVLLAKASHPPFIATRGLTGGQPVMPQW
Ga0182194_11038392	3300017435	Switchgrass Phyllosphere	LTLASSLLASLAGKDYTNFKRVRARTPRKSHGCYTSVLLLRASPLLFIATRGLTKENP
Ga0182200_11581681	3300017439	Switchgrass Phyllosphere	QRLLLSLASSLLASFAGKNYTNFRRVRARTPRKRHGCYTSVLLLRASPLPFIVTRGLTEENP
Ga0182198_11161521	3300017445	Switchgrass Phyllosphere	LSLASSLLASFDGKDYIHFRRTKARTPNASHGFRILVLLAKASHPPFIAARDLTGG
Ga0182215_11271921	3300017447	Switchgrass Phyllosphere	LLASFDGKDYKNLRKARARIPNASHSFRILVLLVEASHPPFVAPRVLLEDDP
Ga0182216_10545761	3300017693	Switchgrass Phyllosphere	LSLARSLLASSAGKDYTNLRRARVRTPNASHSFRILVLLAKASHLPFIAARGLTGGQPMM
Ga0182216_11015951	3300017693	Switchgrass Phyllosphere	MRLQGFLLSLASSLLASFAGKNYTNLRRARARTPRKSHDRYTLVLLAKASPLPFIATRRLAEGEPMNQQCTF
Ga0182216_11351411	3300017693	Switchgrass Phyllosphere	LSLASFLLASFLGRNYTNLRRARARTPRKSHGHYTLVLLAKASLLPFIATRRLAEGEPMNQQCTFH
Ga0182211_10747001	3300017694	Switchgrass Phyllosphere	LSLAISLLASFAGKDYTNFRRARARTPRISHGCYTLVLLAKVSSLPFIATKGLTEETP
Ga0182211_11445211	3300017694	Switchgrass Phyllosphere	LSLASSLLASFARKDYTNFRRARARTPRISHGCYTLVLPVRVSLPPFITTRDTTGGQPVMLQLQ
Ga0182118_1141001	3300020223	Switchgrass Phyllosphere	MDPLRDFRRLFLSLASSILASFAGKDYTNFRRARARTPNASHSFRMLVLLAKASHPPFIAARDLTGGQP
Ga0207668_118876061	3300025972	Switchgrass Rhizosphere	FAGKDYTNLRRARVRTPNASHSFRILVLLAKASHIPFIAARGLTGGQPVML
Ga0207676_121773191	3300026095	Switchgrass Rhizosphere	LSLASSLLASFAGKDYINFRRARVRTPNASHSFRILVLLAKASYPPFIATTVLLEDNP
Ga0268328_10531131	3300028050	Phyllosphere	LSLASSLPASFDGKDYTNFRRVRARTLNARHSFRMLVLLAKASHLPFIATRDLTGG
Ga0268346_10377731	3300028053	Phyllosphere	LLASFAGKLYTNFRRVRVRTPNASHSFRVLVLLANTSHPPFIAA
Ga0268332_10635421	3300028058	Phyllosphere	QGLLLSLASSLLASFAGKDYTSFRRARARTSRISHGRYTLVLLAKASPPPFIATKGLTEGEPVTLQCTHSRMHS
Ga0268314_10146272	3300028061	Phyllosphere	LSLLSSLLASFAGKDYKSFRRARARTPKISHGFYTMVLLVKASLPPFIAARDVNGGQPVMLQ
Ga0268314_10509891	3300028061	Phyllosphere	LSLISSLLASFAGTNYTNLRRARARTPRISHGCYTLVLLAKASPLPFIATRELTEGEPVTQQYT
Ga0268340_10287801	3300028064	Phyllosphere	LSLASSLLASLAGKDYTNVRRARAKTPNTSHNFRILVLLAKASHPPFTATRGLTGGQPVM
Ga0268340_10441471	3300028064	Phyllosphere	LSLASSLLASFVGKNYTNFRRARARTPNASHSFRILVLLAKDSLLPFIAARDCIGGQPVM
Ga0268326_10063081	3300028141	Phyllosphere	FVGRNYIKFRRARARTPRISHGCYTLMLLAKVSLPPFIATKGLTEEEPVTL
Ga0268347_10069871	3300028142	Phyllosphere	RQQRLLLLLASSLLASFAGKNYTNLRRARARTPSKGHGCYTSVLLLRASPLLFIATRGLTKENP
Ga0268347_10278652	3300028142	Phyllosphere	MRLQGFLLSLASSLLASFARKKYTNLRRARARTPRKSHDRYTLVLLAKASPLPFIATRRLAEGELV
Ga0268348_10244152	3300028143	Phyllosphere	RLLFSLASSLLASFVGRNYTNLRRARARTPRKSHGRYTLMLLAKASPLPFIATRGPTEEN
Ga0268343_10195271	3300028150	Phyllosphere	LSLASSLLASLAGKDYTNFRRARARTPRISHGCYTLVLLAKASSLLFIATRELAEGEPVT
Ga0268336_10279041	3300028152	Phyllosphere	SSLLASFVGKDYTNFRRARVRTPKTSHGFYTLVLLAKASLPPFMATRDLTGGQPLTLQ
Ga0268320_10145551	3300028153	Phyllosphere	LSLASSLLASFAGKDYANFRRARARTPNASHSFRMLVLLAKASHRPFIAARDLTGG
Ga0268341_10291342	3300028154	Phyllosphere	LSLASSLLASFVGRNYINLRRARARTPRKSHGRYTLVLLAKASPLPFIATRRLAEGEPVNQQ
Ga0268351_10150441	3300028246	Phyllosphere	LSLASSLLASFAGKDYTNFRRARARTSKISHGFYTLVLLAKASPPLFIATRDTTGGQPVMLQW
Ga0268304_10037372	3300028256	Phyllosphere	LSLASSLLASFVGRNYTNLRRARARTPRKSHSRYTLVLLAKASPLTFIATRRLAEGEPVNQQCTFHGRIHES
Ga0268310_10284911	3300028262	Phyllosphere	LSLASSLLASFVGRNYVKFRKARRTSRKSHGRYTLVLLAKASPLPFIATRRLAIG
Ga0268310_10373431	3300028262	Phyllosphere	LSLASSLLASFVGRNNTNFKRERARTPRISHGCYTLVLLIKASPLPFIATRELTKGEPVN
Ga0268264_118991712	3300028381	Switchgrass Rhizosphere	MRLQGFLLSLASSLLASFARKKYTNLRRARARTPRKSHDHYTLVLLAKASPLPFIATRRLAEGEPVNQ
Ga0268302_1063291	3300028464	Phyllosphere	LSLASSLLASFVGRNYTNLRRARARTPRKSHDRYTLVLLAKASPLPFIAIRRLAEGEPMNQQC
Ga0268333_10120191	3300028467	Phyllosphere	LSLASSLLASLAGKDYTNLRRAIARTPNASHNFIILVLLAKASHPSFIA
Ga0268307_10194241	3300028470	Phyllosphere	LASSLLASFAGKGYTNFRRTRARTPNVSHGCYMLVLQAKASLPPFIATRDLTGGQPVTLQ
Ga0268331_10118562	3300028474	Phyllosphere	LSLASSLLASFAGKDYTNFRRARARTPKISHGFYTLVLLAKAYPPLFIATRDTTGG
Ga0268339_10192911	3300028526	Phyllosphere	LSLASSLLASFAGKDYTNFRRARARTPEINHDFYTLVLLAKASLPHFIAT
Ga0214488_10038491	3300032467	Switchgrass Phyllosphere	LSLASSLLASFAGKDYTNFRRARARTPRISHGRYTLVLLAKASPPPFIATKGLTEGEPVTLQCT
Ga0214491_10484622	3300032469	Switchgrass Phyllosphere	LSLASSLLASFAGKDYTNFRRARARTPRISHGCYTLVLLAKASPLPFIATKGLTEENP
Ga0214502_11366601	3300032514	Switchgrass Phyllosphere	LSLASSLLASFAGKDYTNFKRARARTPRISHGCYTLVLLAKASPLPFIATKGLTEENP
Ga0321339_10000821	3300032551	Switchgrass Phyllosphere	LSLASSLLASFAGKDYTNFRRARARIPRISHGCYTLVLLAKASPLPFIATKGLTEENP
Ga0214484_10005572	3300032591	Switchgrass Phyllosphere	LSLASSLLASFAGKDYTNIRKARARTPRISHGCYTLVLLARAYLPSFIATRDTTGEKNP
Ga0314753_10896302	3300032757	Switchgrass Phyllosphere	LSLASSLLASFAGKDYTNIRRARARIPRISHGCYTLVLLAKASPLPFIATKGLTEENP
Ga0314748_10498671	3300032791	Switchgrass Phyllosphere	LSLASSLLASFAGKDYTNFRRARARTPRIRHGCYTLVLLAKASPLPFIATKGLTEENP
Ga0314739_10511512	3300032913	Switchgrass Phyllosphere	LSLASSLLASFAGKDYTNFRRARARTPRIRHGCYTLVLLAKASPLPFIATKGLTKENP
Ga0314738_10316341	3300032959	Switchgrass Phyllosphere	LSLASSLLASFAGKDYTNFRRARARTPRISHGRYTLVLLAKASPPPFIATKGLTEGEPVT
Ga0314738_10383371	3300032959	Switchgrass Phyllosphere	SLLASFAGKDYTNIRRARARIPRISHGCYTLVLLAKASPLPFIATKGLTEENP
Ga0314722_10715142	3300032966	Switchgrass Phyllosphere	LSLASSLLASFAGKDYTNFRRARARTPRISHGRYTFVLLAKASPPPFIATKGLTEGEP
Ga0314759_10946791	3300033535	Switchgrass Phyllosphere	LSLASSLLASFAGKDYTNFRMARARTPRISHGRYTLVLLAKASPPPFIATKGLTEGEPVT
Ga0314759_11069331	3300033535	Switchgrass Phyllosphere	LLASFAGKNNTNLRRARARTPRKSHGCYTSVLLLRASPLPFIATRGLTVENP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F029302

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences