Metagenome / Metatranscriptome Family F029147

Basic Information
Family ID	F029147
Family Type	Metagenome / Metatranscriptome
Number of Sequences	189
Average Sequence Length	53 residues
Representative Sequence	MGRIVDLCGEIAAAAEEGPDGLILPPDAWERLRADWDDEDIEDALGLVHDSLLQ
Number of Associated Samples	174
Number of Associated Scaffolds	189

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	99.12 %
% of genes near scaffold ends (potentially truncated)	59.26 %
% of genes from short scaffolds (< 2000 bps)	58.20 %
Associated GOLD sequencing projects	169
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.70

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Bacteria (58.730 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (8.466 % of family members)
Environment Ontology (ENVO)	Unclassified (28.042 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (24.868 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100. 1LWSO2_05148640 2JGI1027J12803_1001188551 3JGI25614J43888_101094082 4Ga0055476_103014522 5Ga0055456_103945601 6Ga0055498_101203821 7Ga0066599_1015792721 8Ga0062591_1008800551 9Ga0066678_105470091 10Ga0066388_1018919682 11Ga0068869_1013421382 12Ga0070701_108958622 13Ga0070700_1013987322 14Ga0070694_1009376382 15Ga0066682_101351501 16Ga0070707_1022347181 17Ga0070707_1022538871 18Ga0070695_1016893272 19Ga0070693_1007303162 20Ga0070704_1017565472 21Ga0066701_102476113 22Ga0066701_103104313 23Ga0066691_107049952 24Ga0066706_104083861 25Ga0074479_103069861 26Ga0074472_111811061 27Ga0068862_1016931732 28Ga0075023_1002803312 29Ga0075363_1008970012 30Ga0075417_101913131 31Ga0075366_107307232 32Ga0075021_105322171 33Ga0075430_1004129453 34Ga0075431_1015984582 35Ga0079217_100579403 36Ga0075429_1002008021 37Ga0079215_114340893 38Ga0075426_103737503 39Ga0075436_1013119112 40Ga0079216_101339331 41Ga0099794_105243922 42Ga0066710_1004386231 43Ga0099830_104244172 44Ga0099828_110163102 45Ga0102851_111303161 46Ga0111539_109328032 47Ga0105245_118198501 48Ga0105245_118679811 49Ga0075418_104535911 50Ga0115026_110773193 51Ga0115026_116020151 52Ga0115027_108615011 53Ga0075423_104069801 54Ga0105104_106080952 55Ga0115028_101450761 56Ga0114939_102211522 57Ga0123573_112563983 58Ga0073899_105641652 59Ga0105340_12736371 60Ga0126305_112694091 61Ga0126377_124944581 62Ga0134122_101711393 63Ga0134122_110244521 64Ga0134121_125475742 65Ga0137393_110050571 66Ga0137442_10078761 67Ga0137439_11599301 68Ga0137458_12025632 69Ga0137452_11174332 70Ga0137347_10645652 71Ga0137434_10348651 72Ga0137387_110729862 73Ga0150984_1071456891 74Ga0137373_101239993 75Ga0137398_106643762 76Ga0157296_103356582 77Ga0157295_100851451 78Ga0157283_101605822 79Ga0157298_103577322 80Ga0137407_124141252 81Ga0126375_115443191 82Ga0164302_118009161 83Ga0134076_101601171 84Ga0075303_10312661 85Ga0075340_10940551 86Ga0075353_12302992 87Ga0180078_10344481 88Ga0180094_10395551 89Ga0180104_11335131 90Ga0173483_107940522 91Ga0120098_10248522 92Ga0173480_105232961 93Ga0132258_105202045 94Ga0132255_1003210651 95Ga0132255_1021072381 96Ga0132255_1043007312 97Ga0187785_100471191 98Ga0187785_101287713 99Ga0184615_106099521 100Ga0187765_101342881 101Ga0184639_104767881 102Ga0066667_101797043 103Ga0190268_120923212 104Ga0066662_103338813 105Ga0190264_105994781 106Ga0193731_10500071 107Ga0210378_102583302 108Ga0210382_104625711 109Ga0210379_102534441 110Ga0212127_101312132 111Ga0247743_10457661 112Ga0247796_11124042 113Ga0209320_104553222 114Ga0209109_100509383 115Ga0209109_104618032 116Ga0209324_106680071 117Ga0209002_106599262 118Ga0209519_107547371 119Ga0207646_117144211 120Ga0207706_101506863 121Ga0207689_117521881 122Ga0210089_10449651 123Ga0207712_107825781 124Ga0210127_10419161 125Ga0207708_104174801 126Ga0209470_11575691 127Ga0209266_11792931 128Ga0256815_10317861 129Ga0209807_11217883 130Ga0209056_104110581 131Ga0209886_10466231 132Ga0209592_11029792 133Ga0209481_105514851 134Ga0209590_105164491 135Ga0209450_100305244 136Ga0209253_110141062 137Ga0209382_119616441 138Ga0209382_120981452 139Ga0209705_102966991 140Ga0265306_108257972 141Ga0307290_101375011 142Ga0247826_116350312 143Ga0302046_103071561 144Ga0308187_104595132 145Ga0247727_111520342 146Ga0316579_100564641 147Ga0315536_10934421 148Ga0316576_110915682 149Ga0316578_108056572 150Ga0307468_1019041752 151Ga0315290_105899021 152Ga0307410_118600922 153Ga0310892_105257162 154Ga0315297_109920911 155Ga0315297_112028902 156Ga0302322_1001772774 157Ga0310900_108313672 158Ga0315278_114095201 159Ga0315283_101449673 160Ga0316198_101831793 161Ga0316191_111435881 162Ga0316194_105945062 163Ga0316195_104209402 164Ga0315270_106247012 165Ga0315273_114775291 166Ga0335082_106522282 167Ga0316603_111069152 168Ga0316619_118483572 169Ga0214471_112761352 170Ga0316625_1024810352 171Ga0316613_112878252 172Ga0316613_113080472 173Ga0316600_107908691 174Ga0316627_1028221532 175Ga0316626_101770953 176Ga0316626_121459522 177Ga0316630_103630531 178Ga0316630_122646481 179Ga0316621_110814412 180Ga0299912_104364441 181Ga0316628_1027486161 182Ga0316616_1006335523 183Ga0316616_1013834972 184Ga0247830_110974412 185Ga0373908_118666_3_158 186Ga0364925_0064841_2_118 187Ga0364927_0178739_497_619 188Ga0364929_0084167_3_116 189Ga0364935_0156012_578_721
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100. 1LWSO2_05148640 2JGI1027J12803_1001188551 3JGI25614J43888_101094082 4Ga0055476_103014522 5Ga0055456_103945601 6Ga0066599_1015792721 7Ga0062591_1008800551 8Ga0066678_105470091 9Ga0066388_1018919682 10Ga0068869_1013421382 11Ga0070700_1013987322 12Ga0070694_1009376382 13Ga0070704_1017565472 14Ga0066706_104083861 15Ga0075023_1002803312 16Ga0075021_105322171 17Ga0075430_1004129453 18Ga0079216_101339331 19Ga0102851_111303161 20Ga0111539_109328032 21Ga0075418_104535911 22Ga0115026_116020151 23Ga0115027_108615011 24Ga0105104_106080952 25Ga0115028_101450761 26Ga0123573_112563983 27Ga0073899_105641652 28Ga0126305_112694091 29Ga0137442_10078761 30Ga0126375_115443191 31Ga0075303_10312661 32Ga0180104_11335131 33Ga0173480_105232961 34Ga0132258_105202045 35Ga0132255_1021072381 36Ga0066662_103338813 37Ga0210378_102583302 38Ga0210379_102534441 39Ga0209109_100509383 40Ga0207708_104174801 41Ga0256815_10317861 42Ga0209592_11029792 43Ga0209481_105514851 44Ga0209382_119616441 45Ga0209705_102966991 46Ga0247826_116350312 47Ga0247727_111520342 48Ga0315536_10934421 49Ga0316578_108056572 50Ga0316198_101831793 51Ga0316191_111435881 52Ga0316195_104209402 53Ga0316603_111069152 54Ga0316619_118483572 55Ga0316613_113080472 56Ga0316628_1027486161 57Ga0364927_0178739_497_619
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54 1Ga0157296_103356582 2LWSO2_05148640 3JGI1027J12803_1001188551 4Ga0055476_103014522 5Ga0055498_101203821 6Ga0062591_1008800551 7Ga0066388_1018919682 8Ga0070700_1013987322 9Ga0070694_1009376382 10Ga0066682_101351501 11Ga0066701_102476113 12Ga0066701_103104313 13Ga0075023_1002803312 14Ga0075366_107307232 15Ga0075430_1004129453 16Ga0079217_100579403 17Ga0075429_1002008021 18Ga0115026_110773193 19Ga0115026_116020151 20Ga0115027_108615011 21Ga0105104_106080952 22Ga0115028_101450761 23Ga0114939_102211522 24Ga0123573_112563983 25Ga0073899_105641652 26Ga0105340_12736371 27Ga0126377_124944581 28Ga0134122_101711393 29Ga0134121_125475742 30Ga0137458_12025632 31Ga0137452_11174332 32Ga0126375_115443191 33Ga0075303_10312661 34Ga0075340_10940551 35Ga0180078_10344481 36Ga0180104_11335131 37Ga0173480_105232961 38Ga0132255_1003210651 39Ga0132255_1043007312 40Ga0187785_101287713 41Ga0184615_106099521 42Ga0187765_101342881 43Ga0184639_104767881 44Ga0190268_120923212 45Ga0066662_103338813 46Ga0212127_101312132 47Ga0209320_104553222 48Ga0209519_107547371 49Ga0210127_10419161 50Ga0207708_104174801 51Ga0256815_10317861 52Ga0209886_10466231 53Ga0209592_11029792 54Ga0209481_105514851 55Ga0209450_100305244 56Ga0209705_102966991 57Ga0265306_108257972 58Ga0247826_116350312 59Ga0247727_111520342 60Ga0316578_108056572 61Ga0315290_105899021 62Ga0310892_105257162 63Ga0302322_1001772774 64Ga0310900_108313672 65Ga0316198_101831793 66Ga0316191_111435881 67Ga0316195_104209402 68Ga0335082_106522282 69Ga0316603_111069152 70Ga0316619_118483572 71Ga0316613_112878252 72Ga0316613_113080472 73Ga0316627_1028221532 74Ga0316626_121459522 75Ga0299912_104364441 76Ga0316628_1027486161 77Ga0316616_1013834972 78Ga0247830_110974412
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.12% β-sheet: 7.32% Coil/Unstructured: 47.56%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Structure Viewer
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.70
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.70
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SCOP family	SCOP domain	Representative PDB	TM-score
a.294.1.1: Tex N-terminal region-like	d3bzca3	3bzc	0.68421
a.211.1.1: HD domain	d2heka1	2hek	0.64226
b.40.4.11: DNA replication initiator (cdc21/cdc54) N-terminal domain	d1ltla_	1ltl	0.63937
a.159.2.1: FF domain	d2cqna1	2cqn	0.63146
a.4.5.85: RPO3F domain-like	d2dk8a1	2dk8	0.629

Pfam ID	Name	% Frequency in 189 Family Scaffolds
PF05138	PaaA_PaaC	33.33
PF00441	Acyl-CoA_dh_1	24.87
PF04972	BON	12.70
PF02771	Acyl-CoA_dh_N	5.82
PF02770	Acyl-CoA_dh_M	5.29
PF01042	Ribonuc_L-PSP	3.17
PF12802	MarR_2	2.12
PF10518	TAT_signal	1.06
PF00209	SNF	0.53
PF13561	adh_short_C2	0.53

COG ID	Name	Functional Category	% Frequency in 189 Family Scaffolds
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	35.98
COG3396	1,2-phenylacetyl-CoA epoxidase, catalytic subunit	Secondary metabolites biosynthesis, transport and catabolism [Q]	33.33
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	3.17
COG0733	Na+-dependent transporter, SNF family	General function prediction only [R]	0.53

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	58.73 %
Unclassified	root	N/A	41.27 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	58.73 %
Unclassified	root	N/A	41.27 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	58.73 %
Unclassified	root	N/A	41.27 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	18.52 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.17 %
Unclassified	root	N/A	41.27 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.53 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.06 %
Unclassified	root	N/A	41.27 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	17.46 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	17.46 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.53 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.06 %
Unclassified	root	N/A	41.27 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	17.46 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.53 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1.06 %
Unclassified	root	N/A	41.27 %

Scaffold	Taxonomy	Length	IMG/M Link
2088090006\|LWSO2_GGBSFTI02GCZUA	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300000955\|JGI1027J12803_100118855	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300002906\|JGI25614J43888_10109408	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300004007\|Ga0055476_10301452	Not Available	566	Open in IMG/M
3300004014\|Ga0055456_10394560	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300004058\|Ga0055498_10120382	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	550	Open in IMG/M
3300004643\|Ga0062591_100880055	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300005181\|Ga0066678_10547009	All Organisms → cellular organisms → Bacteria	769	Open in IMG/M
3300005332\|Ga0066388_101891968	All Organisms → cellular organisms → Bacteria	1065	Open in IMG/M
3300005334\|Ga0068869_101342138	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Engineered	Engineered	1.06%
Environmental	Environmental	83.07%
Host-Associated	Host-Associated	15.87%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	28.04%
Bioremediation	Engineered → Bioremediation	0.53%
Plants	Host-Associated → Plants	15.87%
Terrestrial	Environmental → Terrestrial	55.03%
Wastewater	Engineered → Wastewater	0.53%

Habitat	Taxonomy	Distribution
Activated Sludge	Engineered → Wastewater → Activated Sludge	0.53%
Cave	Environmental → Terrestrial → Cave	0.53%
Floodplain	Environmental → Terrestrial → Floodplain	2.12%
Freshwater	Environmental → Aquatic → Freshwater	12.70%
Marine	Environmental → Aquatic → Marine	5.82%
Metal	Engineered → Bioremediation → Metal	0.53%
Peat	Environmental → Terrestrial → Peat	0.53%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.70%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.11%
Roots	Host-Associated → Plants → Roots	1.06%
Sediment	Environmental → Aquatic → Sediment	8.99%
Soil	Environmental → Terrestrial → Soil	51.85%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.53%

Habitat	Taxonomy	Distribution
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	1.06%
Coastal	Environmental → Aquatic → Marine → Coastal	2.12%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.59%
Fossil	Environmental → Terrestrial → Soil → Fossil	0.53%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.53%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.53%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.53%
Lake	Environmental → Aquatic → Freshwater → Lake	3.70%
Lentic	Environmental → Aquatic → Freshwater → Lentic	1.06%
Loam	Environmental → Terrestrial → Soil → Loam	5.82%
Pond	Environmental → Aquatic → Freshwater → Pond	0.53%
Sand	Environmental → Terrestrial → Soil → Sand	0.53%
Sediment	Environmental → Aquatic → Freshwater → Sediment	5.29%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	2.12%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.06%
Subtidal Zone	Environmental → Aquatic → Marine → Subtidal Zone	0.53%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	33.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.05%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.99%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.12%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	0.53%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.53%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.53%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	0.53%
Unclassified	Engineered → Bioremediation → Metal → Unclassified	0.53%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	11.64%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.65%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.06%

Habitat	Taxonomy	Distribution
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.12%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.17%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.29%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.53%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.53%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.94%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	0.53%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	3.70%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	2.12%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	1.06%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.53%
Sediment	Environmental → Aquatic → Freshwater → Pond → Sediment	0.53%
Sediment	Environmental → Aquatic → Marine → Subtidal Zone → Sediment	0.53%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.53%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.52%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	11.64%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.05%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.99%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	5.29%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.65%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	2.12%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.12%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.59%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	1.06%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.06%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.53%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.53%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	0.53%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.53%
Unclassified	Environmental → Terrestrial → Soil → Fossil → Unclassified	0.53%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.53%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.53%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	0.53%
Unclassified	Engineered → Bioremediation → Metal → Unclassified → Unclassified	0.53%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	1.06%

Habitat	Taxonomy	Distribution
Activated Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge	0.53%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.59%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.12%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.53%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.53%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.53%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.29%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.53%
Fossill	Environmental → Terrestrial → Soil → Fossil → Unclassified → Fossill	0.53%
Freshwater	Environmental → Aquatic → Freshwater → Pond → Sediment → Freshwater	0.53%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	1.06%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.59%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater Sediment	0.53%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.53%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.12%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.53%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	0.53%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.53%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.59%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.06%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.53%
Hot Spring Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Hot Spring Sediment	0.53%
Mangrove Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Mangrove Sediment	0.53%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.06%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.06%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.65%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.59%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	1.06%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.35%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.12%
Salt Marsh Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh Sediment	0.53%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	3.70%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	2.12%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment → Sediment	1.59%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment	0.53%
Sediment	Environmental → Aquatic → Marine → Subtidal Zone → Sediment → Sediment	0.53%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	1.06%
Sediment Slurry	Engineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry	0.53%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.53%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	8.47%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.82%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	5.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.12%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.06%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	1.06%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.53%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.53%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.53%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.59%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.06%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.53%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.59%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.76%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.06%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	2.12%
Worm Burrow	Environmental → Aquatic → Marine → Coastal → Sediment → Worm Burrow	0.53%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090006	Sediment microbial communities from Lake Washington, Seattle, for Methane and Nitrogen Cycles, original sample replicate 2	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300004007	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_CordC_D2	Environmental	Open in IMG/M
3300004014	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_CattailNLA_D2	Environmental	Open in IMG/M
3300004058	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D1	Environmental	Open in IMG/M
3300004282	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Initial sediment	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M

Showing 1 to 10 of 174 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
LWSO2_05148640	2088090006	Freshwater Sediment	VDLCGEVVAAADEGAGRADPAPRRLGTGWRDDWSDDDIEDALGLVKDLHLQSDLVE
JGI1027J12803_1001188551	3300000955	Soil	MGRIVDLCGEIAANADEGPDGLVLPVEVRAKLQADWTDEDIDDALSFVHDSLLQSELVEA
JGI25614J43888_101094082	3300002906	Grasslands Soil	MGRIVDLCGEIAASAEEGPEGLILPPDVWERLRADWDDEDIEDALGLVRDSLL
Ga0055476_103014522	3300004007	Natural And Restored Wetlands	MGRIVDLCTEMAAVVEEGPEGLVLPLEAREQFLKSWPDEDLDDALNFVTESLLQSELVDAMD
Ga0055456_103945601	3300004014	Natural And Restored Wetlands	MGRIVDLCGEVAAAADEGSEGLILSPEAWDRLRGEWSEEDIEDALGFVKDSVLLAELVEASDSLSVRLVELLGTW
Ga0055498_101203821	3300004058	Natural And Restored Wetlands	MGRIVDLCGEVAAAADEGPDGLVLPVEAWDKLRDDWSDEDIEDALGLVRESLLQSELVE
Ga0066599_1015792721	3300004282	Freshwater	MGRIVDLCGEVAAAADEGPEGLILPLEAWDRLRDDWSDEDIEDA
Ga0062591_1008800551	3300004643	Soil	MGRIVELCGVIAESAEAGQDGLVLPPADWERLSQDFTDEEIEDALGLV
Ga0066678_105470091	3300005181	Soil	MGRIVELCSEIAENAEEGPDGLILSPDLWDRLRDDWQDEDIEDALSLVRDT
Ga0066388_1018919682	3300005332	Tropical Forest Soil	MARIVDLFGEVAAEADEGAEGLVLSPEAWERLRQDWRDEDIEDALSLVH
Ga0068869_1013421382	3300005334	Miscanthus Rhizosphere	MGRIVDLCGEVAAAAEEGPDGLILPPDVWERLRADWDDEDIDDALGLVHDSLLQAELVESADTLSARLVEV
Ga0070701_108958622	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MGRIADLCSEIVEMAEEGPEGLILSPDAWDRLRDEWTDEEIEDALGLVHDSQ
Ga0070700_1013987322	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MGRIVDLCSDIAESAEEGAEGLVLPPDTWDRLRAEWSEEDIEDALGLVQESLLQSEL
Ga0070694_1009376382	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MGRIVDLCGEVAAAADEGPEGLTLPPEAWDRLRDDWDEEDIEDALGFVRDSLLQGELVDAADS
Ga0066682_101351501	3300005450	Soil	MGRIVDLCGEVAAAADEGPEGLVLPPEAWDRLRTDWEDEDIEDAMGFVHDSLLQGELVDAAESISSR
Ga0070707_1022347181	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MGRIVDLCGEIAASAEEGPDGLVLPPDVWERLRADWDDEDIEDALGLVRDSLLQAELVESADALSARL
Ga0070707_1022538871	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MGRIVDLCGEVAAAADEGPEGLILPPEAWDRLRADWEDEDIEDAMG
Ga0070695_1016893272	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MGRIVDLCGEIAAAAEEGPDGLILPPDAWERLRADWDDEDIEDAMGLVHDSLLQAELVESADSLSSRLVEVLG
Ga0070693_1007303162	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MGRIVDLCGEIAAAAEEGPDGLILPPDAWERLRADWDDEDIEDA
Ga0070704_1017565472	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MGRIADLCSEIVEMAEEGPEGLILSPDAWDRLRDEWTDEEIEDALGLVHDSQLLG
Ga0066701_102476113	3300005552	Soil	MGRIVDLCGEIAAAAEEGPEGLVLPPDVWDRLRADDWEDEDIEDAMGLVHDSLLQAELVESADSLS
Ga0066701_103104313	3300005552	Soil	MGRIVELCSEIAENAEEGPDGLTLSPDLWDRLRDDWQDEDIEDALSLVRDTLLQGA
Ga0066691_107049952	3300005586	Soil	MGRIVDLCGEIAAAAEEGPEGLVLPPDVWDRLRADDWEDEDIEDAMGLVHDSLLQAELV
Ga0066706_104083861	3300005598	Soil	MGRIVDLCGEIAASAEEGPEGLILPPDVWERLRADW
Ga0074479_103069861	3300005829	Sediment (Intertidal)	MGRIADLCGEVAAAADEGPDGLILPVEAWDRLRAEWSDE
Ga0074472_111811061	3300005833	Sediment (Intertidal)	MGRIVDLCGEVAAAAEEGSEGLVLPLEDWDRLRQEWPEEDIEDALGFVKDSVLQSELVEASDSLSTRLVELLGTF
Ga0068862_1016931732	3300005844	Switchgrass Rhizosphere	MGRIVDLCGEIAAAAEEGPDGLILPPDAWERLRADWDDEDIEDALGLVHDSLLQAELVESADS
Ga0075023_1002803312	3300006041	Watersheds	MGRIVDLCAEVAAAAEEGADGLVLPVEAWDQLRADWSDEDIEDALAFVKDSLLQSELV
Ga0075363_1008970012	3300006048	Populus Endosphere	MGRIVDLCGEIAAAAEEGPDGLILPPDAWERLRADWDDEDIE
Ga0075417_101913131	3300006049	Populus Rhizosphere	MGRIVDLCGEIAASAEEGPEGLILPPDVWERLRADWDDEDIEDALGLVRDSLLQAELVESADALS
Ga0075366_107307232	3300006195	Populus Endosphere	MGRIVDLCGEIAAAAEEGPEGLILSVEAWDRLRADWDDEDIDDAMSLVRDSLMQGELIEAADSLSSRLVEI
Ga0075021_105322171	3300006354	Watersheds	MGRIVDLCGEIAAESEEGPEGLILSPDAWDRLRHDWTEEDIEDAMGL
Ga0075430_1004129453	3300006846	Populus Rhizosphere	MGRFADLCGDVAASLEEGVEGLTLPPDAWDRFRADWQEEDVEDAIAL
Ga0075431_1015984582	3300006847	Populus Rhizosphere	MGRIVDLCGEIAAAAEEGPDGLIVPPDVWERLRADWDDEDIEDALGLVHDSL
Ga0079217_100579403	3300006876	Agricultural Soil	MGRIVDLCGEIAAAAEEGPEGLVLGPEMWERLREEWKDDEIEDALSLVHDSL
Ga0075429_1002008021	3300006880	Populus Rhizosphere	MGRIADLCSEIAENAEEGPEGLTLSPDLWDRLRDDWGDEDIEDALNVVRET
Ga0079215_114340893	3300006894	Agricultural Soil	MGRIVDLCGEIAAAAEEGPEGLVLAPDMWDRLREEWTDDDIEDALGLVRDSL
Ga0075426_103737503	3300006903	Populus Rhizosphere	MGRIVDLCGEIAAAAEEGPDGLIVPPDVWERLRADWDDEDIEDALGLVHDSLLQAELVESADTLSA
Ga0075436_1013119112	3300006914	Populus Rhizosphere	MGRIVDLCGEIAASAEEGPEGLILPPDVWERLRADWDD
Ga0079216_101339331	3300006918	Agricultural Soil	MGRIVDLCGEIAAAAEEGPEGLVLGPEMWDRLREEWKDDEIEDALSLVRDSLML
Ga0099794_105243922	3300007265	Vadose Zone Soil	MGRIVDLCGEIAASAEEGPEGLILPPDVWERLRADWDDEDI
Ga0066710_1004386231	3300009012	Grasslands Soil	MGRIVDLCSEIAENAEEGPEGLILSPDLWDRLRDDWQDEDI
Ga0099830_104244172	3300009088	Vadose Zone Soil	MGRIVDLCGEIAASAEEGPEGLILPPDVWERLRADWDDEDIEDALGLVRDSLLQAELVES
Ga0099828_110163102	3300009089	Vadose Zone Soil	MGRIVDLCGEIAAAAEEGPEGLILPPDVWERLRADWDDEDIEDAMGLVHDSLLQA
Ga0102851_111303161	3300009091	Freshwater Wetlands	MGRIVDLLAEVVAGAEEGPEGRLVLGPDDWERLRGDWQDEDIE
Ga0111539_109328032	3300009094	Populus Rhizosphere	MGRILDLFGEVAAEADEGAAGLELSPEAWDRLRGEWKDEDI
Ga0105245_118198501	3300009098	Miscanthus Rhizosphere	MGRIVDLCGEVAAAAEEGPDGLILPPDVWERLRADWDDEDIDDALGLVHDSLLQAELVESADTLSARLVEVLGR
Ga0105245_118679811	3300009098	Miscanthus Rhizosphere	MGRIADLCSEIVEMAEEGPEGLILSPDAWDRLRDEWTDEEIEDALGLVHDSQLL
Ga0075418_104535911	3300009100	Populus Rhizosphere	MVDLCGEVAAAADEGPEGLVLSAEAWDKLRAEYSDEDIEDALAFVKDSLLQSELIEATDSLSAR
Ga0115026_110773193	3300009111	Wetland	MGRIADLCGEIAAAADEGPEGLVLPPDAWERLRGDWTDDDIED
Ga0115026_116020151	3300009111	Wetland	MGRIVDLCGEIAAAYEEGPEGRLVLPPEAWDRLRQSWPEEDIED
Ga0115027_108615011	3300009131	Wetland	VRGWLAETIVKETRQMGRIVDLCGEIAAAADEGPEGMVLPPDAWQRLRQDWSDEDIEDAMGFVKDSILQSELVESADSLSS
Ga0075423_104069801	3300009162	Populus Rhizosphere	MGRIVDLCGEIAAAAEEGPDGLIVPPDVWERLRADWDDEDIEDALGLV
Ga0105104_106080952	3300009168	Freshwater Sediment	MGRFADLCGEIAAAAEEGGEQGLVLPAEAWDRLRAEWSDADIEDALGFVRDSYLQSELVEAADSMSARLVELLKQ
Ga0115028_101450761	3300009179	Wetland	MGRIADLCGEIAAAADEGPEGLVLPLEAWDRLRSDWSEDDIEDALGFVKDSL
Ga0114939_102211522	3300009455	Groundwater	MGRIVDLCGEVAAAADEGSEGLILPPEAWDRLRQEWPEEDIEDALGFVKDSVLQSELVEASDSLSTRLVEVLG
Ga0123573_112563983	3300009509	Mangrove Sediment	MGRIVDLCGEVAAAVDEGPEGFVLPPEAWEEFQKEWSEEDIQDALNF
Ga0073899_105641652	3300009540	Activated Sludge	MGRIVDLLAEVVAGAEEGPDGKLALDPEDWERLRGDWQDEDIEDVLELARNSL
Ga0105340_12736371	3300009610	Soil	MGRIVDLCGEIAANADEGPDGLVLPPDAWGKLRTDWSDEDIEDAL
Ga0126305_112694091	3300010036	Serpentine Soil	MGRIVDLCGEIAAAAEEGPEGLVLGPEMWDRLRAEWTDDD
Ga0126377_124944581	3300010362	Tropical Forest Soil	MGRIVDLCGEIAAAADEGPEGLVLPPEAWERLRAEWDDEDIEDAMAFVRDSLLQSELVEAADSLNARLVEV
Ga0134122_101711393	3300010400	Terrestrial Soil	MGRIADLCGEVAAAADEGPDGLILPVEAWDRLRAEWSDEDIEDAMAFVRDSLLQGELVEAADSL
Ga0134122_110244521	3300010400	Terrestrial Soil	MGRIVDLCGEVAAAADEGPEGLTLPPEAWDRLRDDWDEEDIEDALGFV
Ga0134121_125475742	3300010401	Terrestrial Soil	MGRIVDLCGEIAAAAEEGEDGLVLPREAWERLRAEWSEDDIEDCLGLVHDSLLQAELV
Ga0137393_110050571	3300011271	Vadose Zone Soil	MGRIVDLCGEIAAAAEDGPEGLVLPPEVWERLRADWEDEDIEDAMGLVHDSLLQAELVE
Ga0137442_10078761	3300011414	Soil	MGRIADLCGEIAAAVEDGPDGPVLALDMWDRLREE
Ga0137439_11599301	3300011424	Soil	MGRIVDLCGEVAAAADEGPEGLILPPEAWDRLRDDWDEEDIED
Ga0137458_12025632	3300011436	Soil	MGRIVDLCGEVAAAAEEGTEGLVLPPEDWQRLREDWSEEDIEDALGLVHDSLLQGELVEA
Ga0137452_11174332	3300011441	Soil	MGRIADLCGEVAAAAEEGPEGLLLPVDAWDRFRQEWSDEDIEDALAFVRDSLM
Ga0137347_10645652	3300012152	Soil	MGRIVDLCGEVAAAADEGPEGLILPLDAWDRLRDDWSDEDIEDALGLVKDSLLQSELVEAADSLSTRLV*
Ga0137434_10348651	3300012225	Soil	MGRIVDLCGEVAAAADEGPDGLVLPIEAWDRLRSDWSDEDIEDALGLVRDSL
Ga0137387_110729862	3300012349	Vadose Zone Soil	MGRIVDLCGEVAAAADEGPEGLILPPEAWDRLRADWEDEDIEDAMGFVHDSLLQGELVE
Ga0150984_1071456891	3300012469	Avena Fatua Rhizosphere	MGRIVDLCGEIAAAAEEGPDGLILPPDVWERLRADWDDEDIEDALGLVHDSLLQAELVES
Ga0137373_101239993	3300012532	Vadose Zone Soil	MGRIVDLCGEIAASAEEGPEGLILPPDVWERLRADWDDEDIEDALGLVRDSLLQAELVESADSLS
Ga0137398_106643762	3300012683	Vadose Zone Soil	MGRIVDLCGEVAAAADEGPEGLILPPEAWDRLRDDWEEEDIEDALGFVRDSLLQ
Ga0157296_103356582	3300012905	Soil	MGRIVDLCGEIAAAAEEGPDGLILPPDAWERLRADWDDEDIEDALGLVHDSLLQ
Ga0157295_100851451	3300012906	Soil	MGRIVDLCGEIAAAAEEGPDGLILPPDAWERLRAD
Ga0157283_101605822	3300012907	Soil	MGRIVDLCGEIAAAAEEGPDGLIVPPDVWERLRADWDDEDIEDALGLVHDSLLQA
Ga0157298_103577322	3300012913	Soil	MGRIVDLCGEVAAAAEEGPDGLILPPDVWERLRADWDDDDIEDALGLVHDSLLQAELVESADTLSA
Ga0137407_124141252	3300012930	Vadose Zone Soil	MGRIVDLCGEIAAAAEEGPEGLVLPPDVWDRLRGDWED
Ga0126375_115443191	3300012948	Tropical Forest Soil	MGRIVDLLGEIAAAAEEGADGLVLPPEVWEKLRADWDDEDIEDAMGL
Ga0164302_118009161	3300012961	Soil	MGRIVDLCGEVAAAAEEGPDGLILPPDAWERLRAD
Ga0134076_101601171	3300012976	Grasslands Soil	MGRIVELCGEVAAEADEGPEGLVLPPEAWERLRAD
Ga0075303_10312661	3300014299	Natural And Restored Wetlands	LKRERDMGRILDLCGDIASVAEEGTDGLVLSPEEWDRFRGDWTDEDIEDAL
Ga0075340_10940551	3300014304	Natural And Restored Wetlands	MGRIVDLCGEVAAAADEGPGGLVLPAEAWNRLRDDWSDEDIEDALGFVRD
Ga0075353_12302992	3300014321	Natural And Restored Wetlands	MGRIVDLCGEIAAAADEGPDGLVLPVEAWDKLRDDWSDEDIEDALGLVRDSLL
Ga0180078_10344481	3300014865	Soil	MGRIVDLCGEVAAAADEGPEGGLILPLDAWDRLRDDWSDEDIEDALGLVRDS
Ga0180094_10395551	3300014881	Soil	MGRIADLCGEIAAAADEGPDGLLLPPEAWDRLRGDWSDAEIED
Ga0180104_11335131	3300014884	Soil	MGRIVDLCSEIAAESEEGPEGLVLSPEAWDRLRTDWTEEDIEDAMGLVKDSLLQGDLVD
Ga0173483_107940522	3300015077	Soil	MGRIVDLCGEIAAAAEEGPDGLILPPDAWERLRADWDDEDIEDALGLVHDSLLQAELVESADSLSSRLVEVLGRF
Ga0120098_10248522	3300015170	Fossill	MGRIVELCGEVAAEAEEGPEGLVLPPESWERLRGD
Ga0173480_105232961	3300015200	Soil	MGRIADLCGELAEIAEEGPEGLMLSPDGWERLREEWNDDEIQDGLDLVRDSLLLGEL
Ga0132258_105202045	3300015371	Arabidopsis Rhizosphere	MGRIADLCSEIAENAEEGPEGLTLSPDLWDRLRDDWEDEDI
Ga0132255_1003210651	3300015374	Arabidopsis Rhizosphere	MGRIADLCSEIVEMAEEGPEGLILSPDAWDRLRDEFTDEEIEDALGLVHDSQLLA
Ga0132255_1021072381	3300015374	Arabidopsis Rhizosphere	MVDLCGEVAAAADEGADGLVLSAEAWDRLRAEYSDEDIEDALAF
Ga0132255_1043007312	3300015374	Arabidopsis Rhizosphere	MGRIVDLCSEIAENAEEGAEGLVLSPDLWDRLRDDWTDEDIEDALSLVHDSLLQGELVES
Ga0187785_100471191	3300017947	Tropical Peatland	MGRIVDLCGEIAAESEEGPEGLVLPPEAWDRLRDDWSDEDIEDA
Ga0187785_101287713	3300017947	Tropical Peatland	MGRIVDLCGEIAAESEEGPDGLVLPPEAWDRFREEWSDEDIEDAMSLVRDSLLQGELVE
Ga0184615_106099521	3300018059	Groundwater Sediment	MGRIVDLCGEVAAVADEGPDGLILPPDAWERLRGDWSDEEIEDALGFVKD
Ga0187765_101342881	3300018060	Tropical Peatland	MGRIVDLCGEIAAESEEGPEGLVLPPEAWDRLRDDWSDEDIEDALGLVRDSLLQ
Ga0184639_104767881	3300018082	Groundwater Sediment	MGRIVDLCSEIAESAEEGPKGLVLPPDVQERLRAEWADEDIEDALGLVFGATQK
Ga0066667_101797043	3300018433	Grasslands Soil	MGRIVELCGEVAAEAEEGPEGLILHPDAWERLRADWQDE
Ga0190268_120923212	3300018466	Soil	MGRIVDLCGEIAAAAEEGPEGLVLAPDMWDRLREEWTDDDIEDALGLVRDSLMLAELVESSD
Ga0066662_103338813	3300018468	Grasslands Soil	MGRIVELCGEVASESEEGPEGLVLPPEAWERLRAEWEEQDIEDAL
Ga0190264_105994781	3300019377	Soil	MGRIVDLCGEIAAAAEEGPEGRVLAPDMWDRLREEWTDDDIDDALGLVRDSLMLAELVE
Ga0193731_10500071	3300020001	Soil	MGRIVDLCGEIAAAAEEGLEGLILPPDVWERLRADWDDEDIEDALGL
Ga0210378_102583302	3300021073	Groundwater Sediment	MGRIADLCGEIAAAAEEGPEGWDLAPDMWERLREEWTDDDIEDALGLVRDSLTLAEIVE
Ga0210382_104625711	3300021080	Groundwater Sediment	MGRIVDLCGEIAAAAEEGLEGLILPPDVWERLRADWDDEDIEDALGLVRDSLLQAELVE
Ga0210379_102534441	3300021081	Groundwater Sediment	MGRIVDLCGEIAAAAEEGPDGLVLAPDMWDRLREEWTDDDIEDAMGLVRDSLMLAELVESADSLSSRLVEVLGS
Ga0212127_101312132	3300022550	Hot Spring Sediment	MGRIVDLCGEIAAVADEGPEGLLLPPDAWERLRETWSDDDIEDA
Ga0247743_10457661	3300023067	Soil	MGRIVDLCGEIAAAAEEGPDGLILPPDAWERLRADWDDEDIEDALG
Ga0247796_11124042	3300023261	Soil	MGRIVDLCGEIAAAAEEGPDGLILPPDVWERLRADWDDEDIEDAL
Ga0209320_104553222	3300025155	Soil	MGRIVDLCGNVAAAAEEGPDGLVLPIDAWDQLRQDWSDEDIEDALGLVRDSLLQTELAEAADS
Ga0209109_100509383	3300025160	Soil	MGRIVDLCGNVAAAAEEGPDGLVLPIDAWDQLRQDW
Ga0209109_104618032	3300025160	Soil	MGRIVDLCGEVAAAADEGSEGLVLSPEAWDRLRQDWP
Ga0209324_106680071	3300025174	Soil	MGRIVDLCGNVAAAAEEGPDGLVLPIDAWDQLRQDWSDEDIEDALGLVRDSLLQT
Ga0209002_106599262	3300025289	Soil	MGRIVDLCGEIAAAAEEGPDGLVLAPDMWDRLRDDWN
Ga0209519_107547371	3300025318	Soil	MGRIVDLCGEVAAAADEGSEGLVLSPEAWDRLRQDWPEEDIEDALSFVRDSLLQGEVVDA
Ga0207646_117144211	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MGRIVDLCGEVAAAADEGPEGLILPPEAWDRLRADWEDEDIEDAMGFVRDSL
Ga0207706_101506863	3300025933	Corn Rhizosphere	MGRIVDLCGEIAAAAEEGPDGLILPPDAWERLRADGDDEDIEDAL
Ga0207689_117521881	3300025942	Miscanthus Rhizosphere	MGRMVDLCGEVAAAADEGPEGLVLSAEAWDKLRAEYSDEDIEDALAFVKD
Ga0210089_10449651	3300025957	Natural And Restored Wetlands	MGRIVDLCGEVAAAADEGPDGLVLPVEAWDKLRDDWSDEDIEDALGLVRESLLQSELVEAADS
Ga0207712_107825781	3300025961	Switchgrass Rhizosphere	MGRIVDLCGEIAAAAEEGPDGLILPPDAWERLRADWDDEDI
Ga0210127_10419161	3300025964	Natural And Restored Wetlands	MGRIVDLCGEVAAAADEGSEGLVLPLDAWDRLRADWSDEDIEDALAFVKDSLLQSELVEASDSLSAR
Ga0207708_104174801	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MGRILDLFGEVAAEADEGTEGLELGPEAWDRLRKEWKDEDIDDALALVHESLMQSELIEAAES
Ga0209470_11575691	3300026324	Soil	MGRIVELCGEVAAEAEEGPEGLVLHPEAWERLRADWQDE
Ga0209266_11792931	3300026327	Soil	MGRIVDLCGEVAAAADEGPEGLILPPEAWDRLRTDWEDEDIEDAMGFVHDSLLQ
Ga0256815_10317861	3300026463	Sediment	MGRIADLCSEIAAAADDTEDGLVLPAGARERLREEWPDADIEDALSLVAAQSM
Ga0209807_11217883	3300026530	Soil	MGRIVDLCGEIAAAAEEGAEGLVLPPDVWERLRADWDDEDIEDAMGLVHD
Ga0209056_104110581	3300026538	Soil	MGRIVDLCGEIAASAEEGPEGLILPPDVWERLRADWDDEDIEDALGLVRDSLLQAELV
Ga0209886_10466231	3300027273	Groundwater Sand	MGRIVDLLGEVAAAADEGPEGLVLSAEDWDRFRADWRDEDIEDALSLVHDSLLQGELVEASD
Ga0209592_11029792	3300027731	Freshwater Sediment	MGRIVDLCGEIAAAADEGPDGLILPLDVWEKLRKDWSDDDIEDALGFVKDSLLQSELVEASDSLSAHLVDLLGTWG
Ga0209481_105514851	3300027880	Populus Rhizosphere	MGRIVDLFGEVAAEADEGPEGLILPTDVWERLREDWEEEDIEDALTMVHESLLQGEL
Ga0209590_105164491	3300027882	Vadose Zone Soil	MGRIVDLCGEIAAAAEDGPEGLVLPPEVWERLRADWEDEDIEDAMG
Ga0209450_100305244	3300027885	Freshwater Lake Sediment	MGRIADLCGEVAAAADEGPEGLVLPAEAWDRLRDEWSDADIEDALAFVKDSLLQSELVEAADSMSVR
Ga0209253_110141062	3300027900	Freshwater Lake Sediment	MGRIADLCGEVAAAADEGPEGLVLSPEAWDRLRGEWSDADIEDAL
Ga0209382_119616441	3300027909	Populus Rhizosphere	MGRMVDLCGEVAAAADEGPDGLALSAEAWDRLRADYSD
Ga0209382_120981452	3300027909	Populus Rhizosphere	MGRIVDLCGEIAAAAEEGPEGLILPPDVWERLRADWDDEDIDDALGL
Ga0209705_102966991	3300027979	Freshwater Sediment	MGRIANLCGEVVAAAEEGPEGLQLSTEAREQLRGEWSDADIEDALALVNAPLLLNELVEAADSMSCRL
Ga0265306_108257972	3300028598	Sediment	MGRIVDLCGEVAAVVEEGAEGLVLPIEAREELLADWSDEDIDDALGFVTDSYLQSELVDAAD
Ga0307290_101375011	3300028791	Soil	MGRIADLCGEIAAAAEEGPEGWDLAPDMWERLREEWTDDDIEDALGLVRDSLTLAEIV
Ga0247826_116350312	3300030336	Soil	MGRIVDLMGEVAAAAEEGPEGLILPTEDWQRLQEQEWREEDIED
Ga0302046_103071561	3300030620	Soil	MGRIVDLCGEVAAAADEGREGLVLPPDAWDRLREDWSDEDIEDALGFVKDSLLQSELVEAADSLSTRLVE
Ga0308187_104595132	3300031114	Soil	MGRIVDLCGEIAAAAEEGPDGLIVPPDVWERLRADW
Ga0247727_111520342	3300031576	Biofilm	MGRFADLCGEVAAAADEGREGLVLPVEDWERLRESWRDEDIEDALT
Ga0316579_100564641	3300031691	Rhizosphere	MGRIVDLCGEVAAAVDEGPEGFVLSPEAWEEFRKDWSEEDIQDALNFVTE
Ga0315536_10934421	3300031692	Salt Marsh Sediment	MGRIVDLLGEVAAAADEGATGLILSAEDRLRFQED
Ga0316576_110915682	3300031727	Rhizosphere	MGRIVDLCGEVAAAVDEGPEGFVLSPEAWEEFRKDWSEEDIQ
Ga0316578_108056572	3300031728	Rhizosphere	MGRIVDLLGEVAAAAEEGADGLVLSAEDRLRFHEDWDDEDINDALSLVHDSLLQ
Ga0307468_1019041752	3300031740	Hardwood Forest Soil	MGRIVDLCGEVAAAAEEGPDGLILPPDVWERLRADWDDEDIEDALGLVHDSLLQAELVESADTLSARLVEV
Ga0315290_105899021	3300031834	Sediment	MGRIVDLCGDVAAAADEGPEGLVLPLEAWDKLRDDWSDDDIEDALGVVKDLHLQ
Ga0307410_118600922	3300031852	Rhizosphere	MGRIADLCGEIAEIAEEGPEGLTLSPDGWDRLREDWNDDEIQDGLDLVRDSLLL
Ga0310892_105257162	3300031858	Soil	MGRMVDLCGEVAAAADEGADGLVLSAEAWDRLRAEYSDEDIEDALAFVKDSLMQSELVE
Ga0315297_109920911	3300031873	Sediment	MGRIVDLCGDVAAAADEGPEGLVLPLEAWDRLRDDWSDEDIEDALGLVRDSLLQSELVEAAD
Ga0315297_112028902	3300031873	Sediment	MGRIVDLCGEVAAAADEGPEGLVLPLEAWDRLRDDWSDDDIEDAL
Ga0302322_1001772774	3300031902	Fen	MGRIVDLCGDVAAAADEGPEGLLLPLDAWDKLRQNWSDEDIEDAL
Ga0310900_108313672	3300031908	Soil	MGRILDLFGEVAAEADEGAEGLELSPEAWDRMRGEWQDEDIEDALALVH
Ga0315278_114095201	3300031997	Sediment	MGRIVDLCGDVAAAADEGPEGLVLPLEAWDRLRDDWSDDDIED
Ga0315283_101449673	3300032164	Sediment	MGRIVDLCGDVAAAADEGPEGLVLPLEAWDRLRDDWSDDDIEDALGLVK
Ga0316198_101831793	3300032251	Sediment	MGRIVDLCGEVAAALDEGPEGFVLSIDAREQFLADWTEEDIEDAL
Ga0316191_111435881	3300032258	Worm Burrow	MGRIVDLCGEVAAAMDEGPEGFVLPPEAWETFRKDWSEEDVQDALNFVTESFLQSELVEAADSLS
Ga0316194_105945062	3300032262	Sediment	MGRIVDLCGEVAAALDEGPEGFVLSVEAREQFLADWTEED
Ga0316195_104209402	3300032263	Sediment	MGRIVDLCGEVAAAVEEGAEGLVLPVAAREELLGDWPDEDIEDALAFVTDSYL
Ga0315270_106247012	3300032275	Sediment	MGRIVDLCGDVAAAADEGPEGLVLPLEAWDRLRDDWSDDDIEDALGLVKDSLLQSDLV
Ga0315273_114775291	3300032516	Sediment	MGRILDLCGEVAAAADEGPAGLVLPVEAWDKLRDDWSDDDIEDALGLVKDLHLQSELVEAAD
Ga0335082_106522282	3300032782	Soil	MGRIADLCSEIAAAADDGEDGLVLPAEAREKLREEWSDADIEDALVLVH
Ga0316603_111069152	3300033413	Soil	MGRISDLCGDIAAAADEGPEGLLLPPDAWDRLRADWSDEDIEDAMSFVKDSLLQAELVES
Ga0316619_118483572	3300033414	Soil	MGRILDLCGEVAAAAEPGDGGLVLPMEEQERLGQEWSEDEIEDALAIVQESLMQSELVEAADSLSSRLVELLGAYGDEQAFER
Ga0214471_112761352	3300033417	Soil	MGRILDLCGEIAAAAEEGPEGLVLPPDAWDRLRADWDDEDIEDAMGLVHDSLLQAELVESADN
Ga0316625_1024810352	3300033418	Soil	MGRIADLCGEVAAAADEGPEGLVLPLEAWDKLRDDWSDE
Ga0316613_112878252	3300033434	Soil	MGRIVDLCGDVAAAADEGAEGLVLPPEAWDQLRGDWSDEDIEDALSLVRDSLLQSELVEAVDSLSA
Ga0316613_113080472	3300033434	Soil	MGRILDLLTEVAEWADEGPEELTLPPEAWDRLRTDWVEEDIEDALS
Ga0316600_107908691	3300033481	Soil	MGRIVDLCGEVAAAADEGSEGLVLPLEAWDRLRQEWPEE
Ga0316627_1028221532	3300033482	Soil	MGRIVDLCGEVAAVADEGSEGLTLPPEAWDRLRNDWSDEDIEDALGFVQDSLLQSELVEASDSLS
Ga0316626_101770953	3300033485	Soil	MGRIADLCGEVAAAADEGPEGMVLPAEAWDRLRDEWSD
Ga0316626_121459522	3300033485	Soil	MGRIADLCGEIAAAADEGPDGLVLPPDVWDRLRGDWSDADIEDGLAFVRDSLLQ
Ga0316630_103630531	3300033487	Soil	MGRIADLCGEIAAAADEGPEGLVLPLEAWDRLRSDWSEDDIEDALGFV
Ga0316630_122646481	3300033487	Soil	MGRIVDLCGEVAAAADEGPEGLLLPPDAWDRLRDTWSDDD
Ga0316621_110814412	3300033488	Soil	MGRIADLCGEIAAAADEGPEGLVLPPDVWDRLRGDWSDADIED
Ga0299912_104364441	3300033489	Soil	MGRIADLCGEVAAAADEGPEGLVLSPEAWDRLRGEWSDADIEDALALVNA
Ga0316628_1027486161	3300033513	Soil	MGRIADLCGEVAAAAEEGPDGWVLPPEAWDRLRGEWSDADIEDALGF
Ga0316616_1006335523	3300033521	Soil	MGRISDLCGDIAAAADEGPEGLLLPPDAWDRLRADW
Ga0316616_1013834972	3300033521	Soil	MGRIADLCGEIAAAAEDGPEGLVLPPEAWDRLRADWPDGDIEDALALVRDSVLY
Ga0247830_110974412	3300033551	Soil	MGRIVDLFGEVAAAADEGAEGLVLSPEAWDRLREDWHDEDIEDALQLVRESLLQGELVD
Ga0373908_118666_3_158	3300034085	Sediment Slurry	MGRIANLCGEVVAAAEEGPEGLQLSTEARERLRGEWSDADIEDALALVNAPL
Ga0364925_0064841_2_118	3300034147	Sediment	MGRIVDLCGEVAAAADEGPEGLILPPEAWDRLRGDWDEE
Ga0364927_0178739_497_619	3300034148	Sediment	MGRIVDLCGEIAANADEGPDGLVLPPDAWAKLRTDWSDEDI
Ga0364929_0084167_3_116	3300034149	Sediment	MGRIVELCGEVAAAADEGPEGLILPLEAWDRLRNDWSD
Ga0364935_0156012_578_721	3300034151	Sediment	MGRIVDLCGEVAAAADEGPEGLILPPEAWDRLRGDWDEEDIEDALGFV

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F029147

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences