NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F025808

Metagenome / Metatranscriptome Family F025808

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F025808
Family Type Metagenome / Metatranscriptome
Number of Sequences 200
Average Sequence Length 59 residues
Representative Sequence KIRPGDVYDSTYLSEYLPAAHKLLPPALDWEVAPHVTANVRDKTVDVDLIYSVKAPK
Number of Associated Samples 167
Number of Associated Scaffolds 200

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 1.00 %
% of genes near scaffold ends (potentially truncated) 99.00 %
% of genes from short scaffolds (< 2000 bps) 90.50 %
Associated GOLD sequencing projects 156
AlphaFold2 3D model prediction Yes
3D model pTM-score0.54

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (53.500 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa
(11.500 % of family members)
Environment Ontology (ENVO) Unclassified
(25.500 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(54.500 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 12.94%    β-sheet: 29.41%    Coil/Unstructured: 57.65%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.54
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 200 Family Scaffolds
PF01862PvlArgDC 20.50
PF11154DUF2934 1.50
PF01916DS 1.50
PF05649Peptidase_M13_N 0.50
PF11776RcnB 0.50
PF01548DEDD_Tnp_IS110 0.50
PF07244POTRA 0.50
PF08240ADH_N 0.50
PF12796Ank_2 0.50
PF01435Peptidase_M48 0.50
PF05598DUF772 0.50
PF01243Putative_PNPOx 0.50
PF07519Tannase 0.50
PF00892EamA 0.50
PF12838Fer4_7 0.50

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 200 Family Scaffolds
COG1945Pyruvoyl-dependent arginine decarboxylaseAmino acid transport and metabolism [E] 20.50
COG1899Deoxyhypusine synthaseTranslation, ribosomal structure and biogenesis [J] 1.50
COG3547TransposaseMobilome: prophages, transposons [X] 0.50
COG3590Predicted metalloendopeptidasePosttranslational modification, protein turnover, chaperones [O] 0.50


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms53.50 %
UnclassifiedrootN/A46.50 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000955|JGI1027J12803_100485962All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1226Open in IMG/M
3300001166|JGI12694J13545_1013711Not Available826Open in IMG/M
3300001205|C688J13580_1007066All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1181Open in IMG/M
3300001546|JGI12659J15293_10121842Not Available567Open in IMG/M
3300001593|JGI12635J15846_10475482Not Available741Open in IMG/M
3300004091|Ga0062387_100922521Not Available662Open in IMG/M
3300004091|Ga0062387_101315907All Organisms → cellular organisms → Bacteria → Acidobacteria571Open in IMG/M
3300004092|Ga0062389_100606530All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1259Open in IMG/M
3300004092|Ga0062389_100711138Not Available1179Open in IMG/M
3300004153|Ga0063455_100516743Not Available749Open in IMG/M
3300005179|Ga0066684_10169474All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1397Open in IMG/M
3300005186|Ga0066676_10318906All Organisms → cellular organisms → Bacteria1033Open in IMG/M
3300005434|Ga0070709_10720970Not Available777Open in IMG/M
3300005435|Ga0070714_101284761Not Available714Open in IMG/M
3300005439|Ga0070711_100348743All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1190Open in IMG/M
3300005533|Ga0070734_10883259Not Available507Open in IMG/M
3300005536|Ga0070697_101988415Not Available520Open in IMG/M
3300005538|Ga0070731_10265505All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1139Open in IMG/M
3300005554|Ga0066661_10278292All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1033Open in IMG/M
3300005563|Ga0068855_101405874All Organisms → cellular organisms → Bacteria → Acidobacteria719Open in IMG/M
3300005591|Ga0070761_10890601Not Available562Open in IMG/M
3300005602|Ga0070762_10088039All Organisms → cellular organisms → Bacteria1777Open in IMG/M
3300005602|Ga0070762_10922527All Organisms → cellular organisms → Bacteria → Acidobacteria596Open in IMG/M
3300005712|Ga0070764_10047324All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2201Open in IMG/M
3300005712|Ga0070764_11011629Not Available524Open in IMG/M
3300005895|Ga0075277_1037281Not Available724Open in IMG/M
3300005921|Ga0070766_10160144All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1385Open in IMG/M
3300005921|Ga0070766_10978614All Organisms → cellular organisms → Bacteria → Acidobacteria581Open in IMG/M
3300006028|Ga0070717_11529899Not Available605Open in IMG/M
3300006052|Ga0075029_100384193All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium910Open in IMG/M
3300006086|Ga0075019_10169245All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1284Open in IMG/M
3300006086|Ga0075019_10456039Not Available788Open in IMG/M
3300006162|Ga0075030_100047873All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae3582Open in IMG/M
3300006162|Ga0075030_100998293Not Available659Open in IMG/M
3300006173|Ga0070716_101585170All Organisms → cellular organisms → Bacteria → Acidobacteria537Open in IMG/M
3300006176|Ga0070765_100207299Not Available1781Open in IMG/M
3300006176|Ga0070765_100378942All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1318Open in IMG/M
3300006176|Ga0070765_100501941All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1140Open in IMG/M
3300006954|Ga0079219_11481345All Organisms → cellular organisms → Bacteria613Open in IMG/M
3300007788|Ga0099795_10317734All Organisms → cellular organisms → Bacteria → Acidobacteria689Open in IMG/M
3300009089|Ga0099828_12043970All Organisms → cellular organisms → Bacteria → Acidobacteria500Open in IMG/M
3300009090|Ga0099827_11043548All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium709Open in IMG/M
3300009547|Ga0116136_1086353All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae827Open in IMG/M
3300009618|Ga0116127_1117101All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium688Open in IMG/M
3300009623|Ga0116133_1223532Not Available511Open in IMG/M
3300009635|Ga0116117_1010850All Organisms → cellular organisms → Bacteria2353Open in IMG/M
3300009646|Ga0116132_1082340All Organisms → cellular organisms → Bacteria → Acidobacteria999Open in IMG/M
3300009760|Ga0116131_1174081Not Available610Open in IMG/M
3300010048|Ga0126373_11104811Not Available859Open in IMG/M
3300010339|Ga0074046_10744510Not Available574Open in IMG/M
3300010341|Ga0074045_10170034All Organisms → cellular organisms → Bacteria → Acidobacteria1472Open in IMG/M
3300010343|Ga0074044_10147561Not Available1574Open in IMG/M
3300010366|Ga0126379_11911817Not Available697Open in IMG/M
3300010376|Ga0126381_103521426All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium615Open in IMG/M
3300010398|Ga0126383_11124038All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium875Open in IMG/M
3300010399|Ga0134127_13359167Not Available524Open in IMG/M
3300010876|Ga0126361_11183373All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium772Open in IMG/M
3300012207|Ga0137381_11294295Not Available622Open in IMG/M
3300012207|Ga0137381_11355611Not Available604Open in IMG/M
3300012350|Ga0137372_10177600Not Available1720Open in IMG/M
3300012925|Ga0137419_11552011Not Available562Open in IMG/M
3300012927|Ga0137416_11363250All Organisms → cellular organisms → Bacteria → Acidobacteria642Open in IMG/M
3300012986|Ga0164304_11516810All Organisms → cellular organisms → Bacteria → Acidobacteria555Open in IMG/M
3300013307|Ga0157372_10014358All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae8469Open in IMG/M
3300014201|Ga0181537_10858871All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium615Open in IMG/M
3300014657|Ga0181522_10717324Not Available611Open in IMG/M
3300015241|Ga0137418_10789204Not Available714Open in IMG/M
3300015262|Ga0182007_10434589Not Available504Open in IMG/M
3300015371|Ga0132258_12153724All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1401Open in IMG/M
3300016341|Ga0182035_11938009Not Available535Open in IMG/M
3300016445|Ga0182038_10584613All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium962Open in IMG/M
3300017924|Ga0187820_1321438All Organisms → cellular organisms → Bacteria → Acidobacteria513Open in IMG/M
3300017932|Ga0187814_10309252All Organisms → cellular organisms → Bacteria → Acidobacteria606Open in IMG/M
3300017933|Ga0187801_10078114Not Available1234Open in IMG/M
3300017935|Ga0187848_10491948All Organisms → cellular organisms → Bacteria → Acidobacteria502Open in IMG/M
3300017948|Ga0187847_10265905All Organisms → cellular organisms → Bacteria → Acidobacteria936Open in IMG/M
3300017966|Ga0187776_11469109All Organisms → cellular organisms → Bacteria → Acidobacteria522Open in IMG/M
3300017970|Ga0187783_10804601All Organisms → cellular organisms → Bacteria → Acidobacteria678Open in IMG/M
3300017970|Ga0187783_10967738All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium613Open in IMG/M
3300017970|Ga0187783_11147753All Organisms → cellular organisms → Bacteria → Acidobacteria560Open in IMG/M
3300017973|Ga0187780_10496984All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium871Open in IMG/M
3300018006|Ga0187804_10231373All Organisms → cellular organisms → Bacteria → Acidobacteria795Open in IMG/M
3300018012|Ga0187810_10301456Not Available663Open in IMG/M
3300018030|Ga0187869_10135229All Organisms → cellular organisms → Bacteria → Acidobacteria1229Open in IMG/M
3300018037|Ga0187883_10368436Not Available735Open in IMG/M
3300018042|Ga0187871_10205752Not Available1099Open in IMG/M
3300018044|Ga0187890_10000362All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae32526Open in IMG/M
3300018057|Ga0187858_10876121All Organisms → cellular organisms → Bacteria → Acidobacteria529Open in IMG/M
3300018062|Ga0187784_10029108All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae4462Open in IMG/M
3300018062|Ga0187784_10906285All Organisms → cellular organisms → Bacteria → Acidobacteria702Open in IMG/M
3300018085|Ga0187772_11038229All Organisms → cellular organisms → Bacteria → Acidobacteria600Open in IMG/M
3300018088|Ga0187771_11064278Not Available686Open in IMG/M
3300018088|Ga0187771_11115577All Organisms → cellular organisms → Bacteria → Acidobacteria669Open in IMG/M
3300018090|Ga0187770_10174276Not Available1647Open in IMG/M
3300018090|Ga0187770_10907231Not Available707Open in IMG/M
3300020021|Ga0193726_1027281All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2854Open in IMG/M
3300020199|Ga0179592_10303752Not Available709Open in IMG/M
3300020579|Ga0210407_10956163Not Available655Open in IMG/M
3300020581|Ga0210399_10215995All Organisms → cellular organisms → Bacteria → Acidobacteria1597Open in IMG/M
3300020583|Ga0210401_11099812All Organisms → cellular organisms → Bacteria → Acidobacteria653Open in IMG/M
3300021178|Ga0210408_10944887Not Available669Open in IMG/M
3300021180|Ga0210396_10212271All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum1727Open in IMG/M
3300021181|Ga0210388_11450067All Organisms → cellular organisms → Bacteria → Acidobacteria575Open in IMG/M
3300021181|Ga0210388_11625787Not Available536Open in IMG/M
3300021401|Ga0210393_10162888Not Available1795Open in IMG/M
3300021401|Ga0210393_10368280Not Available1170Open in IMG/M
3300021402|Ga0210385_10842722All Organisms → cellular organisms → Bacteria → Acidobacteria703Open in IMG/M
3300021402|Ga0210385_11263165Not Available566Open in IMG/M
3300021404|Ga0210389_10539185Not Available918Open in IMG/M
3300021406|Ga0210386_11278472Not Available618Open in IMG/M
3300021407|Ga0210383_10044465All Organisms → cellular organisms → Bacteria3701Open in IMG/M
3300021407|Ga0210383_10089552All Organisms → cellular organisms → Bacteria2583Open in IMG/M
3300021476|Ga0187846_10147193All Organisms → cellular organisms → Bacteria → Acidobacteria998Open in IMG/M
3300022521|Ga0224541_1003725Not Available1609Open in IMG/M
3300022557|Ga0212123_10663852Not Available647Open in IMG/M
3300022726|Ga0242654_10238494Not Available647Open in IMG/M
3300023012|Ga0228597_107912Not Available607Open in IMG/M
3300024176|Ga0224565_1026504Not Available643Open in IMG/M
3300024331|Ga0247668_1103851Not Available575Open in IMG/M
3300024347|Ga0179591_1250927All Organisms → cellular organisms → Bacteria → Acidobacteria2196Open in IMG/M
3300025414|Ga0208935_1010073Not Available1297Open in IMG/M
3300025928|Ga0207700_11848819All Organisms → cellular organisms → Bacteria530Open in IMG/M
3300025929|Ga0207664_11678993Not Available557Open in IMG/M
3300025988|Ga0208141_1025868Not Available557Open in IMG/M
3300026467|Ga0257154_1041807Not Available703Open in IMG/M
3300026547|Ga0209156_10104740All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1402Open in IMG/M
3300027371|Ga0209418_1031953All Organisms → cellular organisms → Bacteria → Acidobacteria913Open in IMG/M
3300027604|Ga0208324_1183544Not Available560Open in IMG/M
3300027609|Ga0209221_1009486All Organisms → cellular organisms → Bacteria2494Open in IMG/M
3300027616|Ga0209106_1119653Not Available590Open in IMG/M
3300027652|Ga0209007_1007690All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2879Open in IMG/M
3300027737|Ga0209038_10051742All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae1229Open in IMG/M
3300027812|Ga0209656_10509604Not Available525Open in IMG/M
3300027826|Ga0209060_10565639Not Available515Open in IMG/M
3300027829|Ga0209773_10257058All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium729Open in IMG/M
3300027879|Ga0209169_10487713Not Available647Open in IMG/M
3300027884|Ga0209275_10052714All Organisms → cellular organisms → Bacteria1962Open in IMG/M
3300027884|Ga0209275_10731349Not Available570Open in IMG/M
3300027884|Ga0209275_10931008Not Available501Open in IMG/M
3300027889|Ga0209380_10424438Not Available779Open in IMG/M
3300027898|Ga0209067_10112888All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1421Open in IMG/M
3300027898|Ga0209067_10430787Not Available741Open in IMG/M
3300027905|Ga0209415_10593448All Organisms → cellular organisms → Bacteria → Acidobacteria823Open in IMG/M
3300027905|Ga0209415_10672128All Organisms → cellular organisms → Bacteria → Acidobacteria749Open in IMG/M
3300028020|Ga0265351_1007826All Organisms → cellular organisms → Bacteria → Acidobacteria867Open in IMG/M
3300028047|Ga0209526_10756859Not Available606Open in IMG/M
3300028747|Ga0302219_10051403Not Available1536Open in IMG/M
3300028759|Ga0302224_10052933Not Available1520Open in IMG/M
3300028788|Ga0302189_10383889All Organisms → cellular organisms → Bacteria → Acidobacteria553Open in IMG/M
3300028798|Ga0302222_10197739Not Available787Open in IMG/M
3300028798|Ga0302222_10384466Not Available548Open in IMG/M
3300028800|Ga0265338_10828136Not Available633Open in IMG/M
3300028808|Ga0302228_10136464Not Available1135Open in IMG/M
3300028871|Ga0302230_10334539All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium587Open in IMG/M
3300028879|Ga0302229_10224822Not Available854Open in IMG/M
3300028906|Ga0308309_11075185All Organisms → cellular organisms → Bacteria → Acidobacteria696Open in IMG/M
3300029915|Ga0311358_10459489All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1007Open in IMG/M
3300029944|Ga0311352_10752463All Organisms → cellular organisms → Bacteria → Acidobacteria765Open in IMG/M
3300029956|Ga0302150_10333842Not Available563Open in IMG/M
3300029997|Ga0302302_1333304Not Available541Open in IMG/M
3300029999|Ga0311339_11221983Not Available687Open in IMG/M
3300030043|Ga0302306_10005460All Organisms → cellular organisms → Bacteria5934Open in IMG/M
3300030045|Ga0302282_1351706All Organisms → cellular organisms → Bacteria → Acidobacteria525Open in IMG/M
3300030051|Ga0302195_10243030All Organisms → cellular organisms → Bacteria → Acidobacteria813Open in IMG/M
3300030053|Ga0302177_10338572All Organisms → cellular organisms → Bacteria → Acidobacteria796Open in IMG/M
3300030399|Ga0311353_10095425All Organisms → cellular organisms → Bacteria2903Open in IMG/M
3300030521|Ga0307511_10237565Not Available893Open in IMG/M
3300030580|Ga0311355_10142897All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2586Open in IMG/M
3300030580|Ga0311355_11521246Not Available577Open in IMG/M
3300030707|Ga0310038_10369560All Organisms → cellular organisms → Bacteria → Acidobacteria630Open in IMG/M
3300030760|Ga0265762_1035313All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium961Open in IMG/M
3300030813|Ga0265750_1005295Not Available1360Open in IMG/M
3300030847|Ga0075405_11924993Not Available613Open in IMG/M
3300030906|Ga0302314_10936183Not Available846Open in IMG/M
3300030906|Ga0302314_11020372All Organisms → cellular organisms → Bacteria → Acidobacteria796Open in IMG/M
3300031028|Ga0302180_10255591Not Available919Open in IMG/M
3300031231|Ga0170824_100677170All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1440Open in IMG/M
3300031233|Ga0302307_10325104Not Available785Open in IMG/M
3300031236|Ga0302324_100297871All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2475Open in IMG/M
3300031236|Ga0302324_100900058All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1217Open in IMG/M
3300031525|Ga0302326_10010800All Organisms → cellular organisms → Bacteria19738Open in IMG/M
3300031525|Ga0302326_10721331Not Available1453Open in IMG/M
3300031708|Ga0310686_101923181All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium964Open in IMG/M
3300031708|Ga0310686_102402520Not Available528Open in IMG/M
3300031708|Ga0310686_104099874All Organisms → cellular organisms → Bacteria → Acidobacteria650Open in IMG/M
3300031712|Ga0265342_10349526All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium770Open in IMG/M
3300031715|Ga0307476_10006961All Organisms → cellular organisms → Bacteria6893Open in IMG/M
3300031715|Ga0307476_10133854All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1772Open in IMG/M
3300031715|Ga0307476_10298295Not Available1182Open in IMG/M
3300031715|Ga0307476_10890053All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium657Open in IMG/M
3300031754|Ga0307475_11315720All Organisms → cellular organisms → Bacteria → Acidobacteria559Open in IMG/M
3300031941|Ga0310912_10905229Not Available679Open in IMG/M
3300031962|Ga0307479_11617876All Organisms → cellular organisms → Bacteria → Acidobacteria603Open in IMG/M
3300032160|Ga0311301_10380988All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2177Open in IMG/M
3300032783|Ga0335079_10960714All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium874Open in IMG/M
3300032828|Ga0335080_12043589Not Available554Open in IMG/M
3300032892|Ga0335081_12050401All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium608Open in IMG/M
3300032898|Ga0335072_11615801Not Available546Open in IMG/M
3300033158|Ga0335077_11766839Not Available582Open in IMG/M
3300034124|Ga0370483_0044663Not Available1383Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa11.50%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil10.00%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil8.00%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland6.00%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil5.50%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil4.00%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil4.00%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland3.50%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil3.50%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland3.50%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds3.50%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.00%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.00%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment2.50%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil2.50%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.50%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil2.50%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil2.00%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog2.00%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.50%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil1.50%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog1.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.00%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil1.00%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.00%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil1.00%
Plant LitterEnvironmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter1.00%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere1.00%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring0.50%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.50%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.50%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.50%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil0.50%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil0.50%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen0.50%
BiofilmEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm0.50%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.50%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.50%
EctomycorrhizaHost-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza0.50%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.50%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.50%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil0.50%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300001166Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2EnvironmentalOpen in IMG/M
3300001205Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300001546Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1EnvironmentalOpen in IMG/M
3300001593Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2EnvironmentalOpen in IMG/M
3300004091Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004153Grasslands soil microbial communities from Hopland, California, USA (version 2)EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005533Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1EnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005538Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1EnvironmentalOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300005563Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2Host-AssociatedOpen in IMG/M
3300005591Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1EnvironmentalOpen in IMG/M
3300005602Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2EnvironmentalOpen in IMG/M
3300005712Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4EnvironmentalOpen in IMG/M
3300005895Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_101EnvironmentalOpen in IMG/M
3300005921Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6EnvironmentalOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006052Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013EnvironmentalOpen in IMG/M
3300006086Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013EnvironmentalOpen in IMG/M
3300006162Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012EnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300007788Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2EnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009547Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40EnvironmentalOpen in IMG/M
3300009618Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_100EnvironmentalOpen in IMG/M
3300009623Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10EnvironmentalOpen in IMG/M
3300009635Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_10EnvironmentalOpen in IMG/M
3300009646Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_150EnvironmentalOpen in IMG/M
3300009760Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_100EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010339Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3EnvironmentalOpen in IMG/M
3300010341Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2EnvironmentalOpen in IMG/M
3300010343Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010876Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300014201Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaGEnvironmentalOpen in IMG/M
3300014657Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaGEnvironmentalOpen in IMG/M
3300015241Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015262Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300016341Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170EnvironmentalOpen in IMG/M
3300016445Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108EnvironmentalOpen in IMG/M
3300017924Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5EnvironmentalOpen in IMG/M
3300017932Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4EnvironmentalOpen in IMG/M
3300017933Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1EnvironmentalOpen in IMG/M
3300017935Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40EnvironmentalOpen in IMG/M
3300017948Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10EnvironmentalOpen in IMG/M
3300017966Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MGEnvironmentalOpen in IMG/M
3300017970Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300017973Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MGEnvironmentalOpen in IMG/M
3300018006Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4EnvironmentalOpen in IMG/M
3300018012Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5EnvironmentalOpen in IMG/M
3300018030Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100EnvironmentalOpen in IMG/M
3300018037Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10EnvironmentalOpen in IMG/M
3300018042Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10EnvironmentalOpen in IMG/M
3300018044Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10EnvironmentalOpen in IMG/M
3300018057Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150EnvironmentalOpen in IMG/M
3300018062Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018085Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018088Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MGEnvironmentalOpen in IMG/M
3300018090Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300020021Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1EnvironmentalOpen in IMG/M
3300020199Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021181Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-OEnvironmentalOpen in IMG/M
3300021401Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-OEnvironmentalOpen in IMG/M
3300021402Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-OEnvironmentalOpen in IMG/M
3300021404Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-OEnvironmentalOpen in IMG/M
3300021406Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-OEnvironmentalOpen in IMG/M
3300021407Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-OEnvironmentalOpen in IMG/M
3300021476Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)EnvironmentalOpen in IMG/M
3300022521Peat soil microbial communities from Stordalen Mire, Sweden - 717 E3 20-24EnvironmentalOpen in IMG/M
3300022557Paint Pots_combined assemblyEnvironmentalOpen in IMG/M
3300022726Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300023012Spruce litter microbial communities from Bohemian Forest, Czech Republic - CLU4EnvironmentalOpen in IMG/M
3300024176Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLU1EnvironmentalOpen in IMG/M
3300024331Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK09EnvironmentalOpen in IMG/M
3300024347Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300025414Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10 (SPAdes)EnvironmentalOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025988Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_101 (SPAdes)EnvironmentalOpen in IMG/M
3300026467Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-AEnvironmentalOpen in IMG/M
3300026547Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)EnvironmentalOpen in IMG/M
3300027371Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027604Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027609Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027616Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027652Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027737Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)EnvironmentalOpen in IMG/M
3300027812Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)EnvironmentalOpen in IMG/M
3300027826Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027829Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)EnvironmentalOpen in IMG/M
3300027879Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)EnvironmentalOpen in IMG/M
3300027884Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)EnvironmentalOpen in IMG/M
3300027889Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)EnvironmentalOpen in IMG/M
3300027898Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)EnvironmentalOpen in IMG/M
3300027905Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)EnvironmentalOpen in IMG/M
3300028020Soil microbial communities from Maridalen valley, Oslo, Norway - NSE4EnvironmentalOpen in IMG/M
3300028047Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300028747Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2EnvironmentalOpen in IMG/M
3300028759Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_1EnvironmentalOpen in IMG/M
3300028788Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_2EnvironmentalOpen in IMG/M
3300028798Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2EnvironmentalOpen in IMG/M
3300028800Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaGHost-AssociatedOpen in IMG/M
3300028808Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_2EnvironmentalOpen in IMG/M
3300028871Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_1EnvironmentalOpen in IMG/M
3300028879Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_3EnvironmentalOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300029915III_Bog_E1 coassemblyEnvironmentalOpen in IMG/M
3300029944II_Palsa_E1 coassemblyEnvironmentalOpen in IMG/M
3300029956Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N1_2EnvironmentalOpen in IMG/M
3300029997Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E1_3EnvironmentalOpen in IMG/M
3300029999I_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030043Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_1EnvironmentalOpen in IMG/M
3300030045Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_3EnvironmentalOpen in IMG/M
3300030051Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_2EnvironmentalOpen in IMG/M
3300030053Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2EnvironmentalOpen in IMG/M
3300030399II_Palsa_E2 coassemblyEnvironmentalOpen in IMG/M
3300030521Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EMHost-AssociatedOpen in IMG/M
3300030580II_Palsa_N1 coassemblyEnvironmentalOpen in IMG/M
3300030707Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)EnvironmentalOpen in IMG/M
3300030760Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030813Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030847Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030906Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_3EnvironmentalOpen in IMG/M
3300031028Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2EnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031233Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2EnvironmentalOpen in IMG/M
3300031236Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1EnvironmentalOpen in IMG/M
3300031525Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031712Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaGHost-AssociatedOpen in IMG/M
3300031715Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031941Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032783Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3EnvironmentalOpen in IMG/M
3300032828Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4EnvironmentalOpen in IMG/M
3300032892Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5EnvironmentalOpen in IMG/M
3300032898Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1EnvironmentalOpen in IMG/M
3300033158Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1EnvironmentalOpen in IMG/M
3300034124Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI1027J12803_10048596213300000955SoilTAKLRNAWKLRPGDVYDATYLSEYLPAARKLLPSGLDWDVSSHVTANVRDKTVDVDLDYSAKAPK*
JGI12694J13545_101371113300001166Forest SoilWKIRPGEVYDSTYLDEYLPVALKLLPPTLDWDVASHVTANGRDKTVDIDLIYTVRAPK*
C688J13580_100706613300001205SoilRNAWKLRPTDVYDASYLDEYLPAAQKLLPSNFDWDVAPHVTANQRDKTVDVDLIYTVKAPK*
JGI12659J15293_1012184213300001546Forest SoilYLKQFLPQARKLLPPTLDWEVDPHVTAIARDKTVDVDLQYTAKAAQ*
JGI12635J15846_1047548223300001593Forest SoilDNSLMAKLRNAWKIRFGEVYDSTYLSEYLPAAHKLLPPTLDWDVAPHVTANVRDKTVDVDLIYSVKAPK*
Ga0062387_10092252123300004091Bog Forest SoilRVGDVYDSTYLSDYLPEAHKLLAANLDWEVTPHVTANIREKTVDVDLIYSVKAPK*
Ga0062387_10131590723300004091Bog Forest SoilRPGDVYDSTYLKEFLPQARRLLPTTIDWEVSPHVTAIARENIVDVDLQYTARAPQ*
Ga0062389_10060653033300004092Bog Forest SoilIRVGDVYDSTYLSDYLPEAHKLLAANLDWEVTPHVTANIREKSVDVDLIYSVKAPK*
Ga0062389_10071113813300004092Bog Forest SoilTARLRAAWKIRPGDVYDATYLKQFLPQARKLLPANMDWEVDPHVTAIARDKTVDVDLQYTAKATQ*
Ga0063455_10051674313300004153SoilNLWKIRAGEVYDSTYLSEYLPEAHKLLTASLDWDVASHVTANVKDKNVDVDLIYSAKAPK
Ga0066684_1016947413300005179SoilRPGEVYNSTYLSEYLPQAQKLLPPSLDWEVTPHVTANVKDKTVDVDLIYSAKAPK*
Ga0066676_1031890633300005186SoilPGEVYDATYLSEYLPAAQKLLPPSLDWEVASHATANVRDKTVDVDLIYSVKAPK*
Ga0070709_1072097013300005434Corn, Switchgrass And Miscanthus RhizosphereRAGEVYNSTYLSDYLPEARKLLPASLDWDVASHVTANVREKTVDVDLIYSAKAPR*
Ga0070714_10128476113300005435Agricultural SoilLEAKLRNLWKLRAGEVYNSTYLSDYLPEARKLLPASLDWDVASHVTANVREKTVDVDLIYSAKAPR*
Ga0070711_10034874333300005439Corn, Switchgrass And Miscanthus RhizosphereDNGLTAKLRNAWKIRPGEVYNSTYLSEYLPAAQRLLPPTLDWEVSPHVTANVKDKTVDVDLIYSAKAPK*
Ga0070734_1088325913300005533Surface SoilLRNIWKLRQGEVYDATYLSEYLAEAHKLLPANLDWDVASHVTANVRDKTVDVDLIYSVKAPK*
Ga0070697_10198841513300005536Corn, Switchgrass And Miscanthus RhizosphereSAWKLRQGDVYDATYLKHYLPEANRLLPVNLDWGVSPHVTANVRDKTVDVDLQYTAKAPK
Ga0070731_1026550513300005538Surface SoilTAKLRNAWKIRPGDVYDATYLSEYLPIAQKLLPSTLDWETSSHVTANIGDKTVDVDLIYTAKAPK*
Ga0066661_1027829233300005554SoilWKIRPGEVYNSTYLSEYLPAAQRLLPPTLDWEVSPHVTANVKDQTVDVDLIYSAKAPK*
Ga0068855_10140587413300005563Corn RhizosphereNGLTAKLRNAWKIRPGEIYNSTYLSEYLPTAQRLLPPTLDWEVSPHVTPNVRDKTVDVDLIYTAKAPK*
Ga0070761_1089060123300005591SoilKQFLPQARKLLPVTMDWDVTPHVTAIAKDLTVDVDLQYTAKAPQ*
Ga0070762_1008803913300005602SoilEVYDASYLNEFLPRARKLLPATVDWEVSSHITAIAKDKTVDVDLQYMAKAPR*
Ga0070762_1092252723300005602SoilIRPGDVYDATYLKEFLPQARRMLPPTIDWDVAPHVTAIAKDKTVDVDLEYTAKAPK*
Ga0070764_1004732453300005712SoilNSLTAKLRAAWKIRPGDVYDATYLKEFLPQARRMLPPTIDWDVAPHVTAIAKDKTVDVDLEYTAKAPK*
Ga0070764_1101162923300005712SoilRPGDVYDATYLNQFLPEARKLLPPTLDWEVDPHVTAIARDKTVDVDLQYTVKAVQ*
Ga0075277_103728113300005895Rice Paddy SoilDNSLTAKLRNAWKIRPGEVYNAAYLSEYLPSAQKLLPPTLDWEVSPHVTANVRDKTVDVDLIYSAKAPK*
Ga0070766_1016014433300005921SoilKLRAAWKIRPGDVYDATYLKEFLPQARRLLPPTIDWDVAPHVTAIAKDKTVDVDLEYTAKAPK*
Ga0070766_1097861423300005921SoilLRGIWKLRPGDVYDSTYLSEYLPAAQKLLPPTLDWEVSSHVTANVRDKSVDVDLIYSVKAPK*
Ga0070717_1152989923300006028Corn, Switchgrass And Miscanthus RhizosphereNLWKIRAGEVYNSTYLSEYLPEAHKLLTASLDWDVASHVTANVRDKTVDVDLIYSAKAPK
Ga0075029_10038419313300006052WatershedsVYDSTYLSEYLPAAHKLLPANLDWEVATHVTANVRDKSVDVDIIYSVKAPK*
Ga0075019_1016924543300006086WatershedsLRNAWKLRPGDVYDSTYLSEYLPAAHKLLPSGLDWDVSSHVTANVRDKTVDVDLIYSVKAPK*
Ga0075019_1045603913300006086WatershedsGDVFDASYLDQYLPEAQKLLPASLDWEVASHATANVRDKTVDVDLVCSVRAPK*
Ga0075030_10004787353300006162WatershedsRKGDVYDGEYLDQYLPVAYKLLPPNFDWQASPHVTPNLRDKTVDVDLIYSVKASK*
Ga0075030_10099829323300006162WatershedsAWKLRQGDVFDASYLDQYLPEAQKLLPASLDWEVASHATANVRDKTVDVDLVCSVRAPK*
Ga0070716_10158517013300006173Corn, Switchgrass And Miscanthus RhizosphereSLTAKLRNAWKIRPGEVYDSTYLSEYLPAAHKLLPSGLDWDVSSHVTANAHDKTVDVDLIYSVKAPK*
Ga0070765_10020729943300006176SoilLRALWKIRPGEVYDATYLKRFLPEARKLLPPSLDWEVDPHVTAITRDKTVDVDLQYTAKATQ*
Ga0070765_10037894233300006176SoilDNSLEAKLRNLWKIRQGEIFDSTYLSEYLPAARKQLPANLDWDVTSHVTANMRDKSVDVDLIYSAKAPK*
Ga0070765_10050194113300006176SoilSGDVYDATYLKQFLPQARKLLPANLDWEVSTHVTALTGSKTVDVDLQYTAKAPQ*
Ga0079219_1148134523300006954Agricultural SoilRPGDVYDSTYLSEYLPAAQKLLPPAFDWEVSSHVTANERDKTVDVDLIYSVKAAK*
Ga0099795_1031773413300007788Vadose Zone SoilIDNNLTARLRAAWKIRPGDVYDATYLKQFLPQARKLLPANLDWDVEPHATAITRDKTVDVDLQYTAKATQ*
Ga0099828_1204397013300009089Vadose Zone SoilKLRNAWKIRPGDVYDSTYLSEYLPAAQKLLPPALDWDVAPHVTANVRDKTVDVDLIYSVKAPK*
Ga0099827_1104354813300009090Vadose Zone SoilAAWKIRPGDVYDATYLKQFLSQARKLLPASIDWEVEPHVTAITRDKTVDVDLQYTAKAAQ
Ga0116136_108635313300009547PeatlandRQGDVYDATYLDSYLPQAHKLLPSRLDWEVSPHVTANVRDKTVDVDIIYSVKAPN*
Ga0116127_111710113300009618PeatlandARLRAAWKIHSGDVYDATYLKEFLPQARKLLPPAIDWEVSPHVTAIAKDKTVDVDLQYTAKAPQ*
Ga0116133_122353223300009623PeatlandAWKIRAGDVYDVTYLQQYLSQARKLLPASVDWEVSSHVTAISRDKTIDVDLQYMAKAPR*
Ga0116117_101085043300009635PeatlandWKIRPGDVYDATYLKEFLPQARRLLPPTIDWDVAPHVTAIAKDKTVDVEIRFKQQ*
Ga0116132_108234013300009646PeatlandRAAWKIRPGDVYDATYLNEFLPQARKLLPSTIDWEVSPHVTAMAKDKTVDVDLQYTAKAPQ*
Ga0116131_117408123300009760PeatlandVYDATYLKEFLPQARKLLPPAIDWEVSPHVTAIAKDKTVDVDLQYTAKAPQ*
Ga0126373_1110481113300010048Tropical Forest SoilSLTAKLRNAWKLRPGDVYDAGYLAEYLPEARKLLPSNFDWDVSSHVTANVREKTVDVDLIYAVRAAPK*
Ga0074046_1074451013300010339Bog Forest SoilVYDSTYLDSYLTESHKLLPTRLDWEVSPHATANVRDKTVDVDIIYSVKAVNQGP*
Ga0074045_1017003433300010341Bog Forest SoilVWKIRPGDVYDASYLEEYLPDAHKLLPARLDWEVSPHVTANIADKTVDVDLIYSVKAPN*
Ga0074044_1014756133300010343Bog Forest SoilDASYLEQYLPQARKLLPANIDWEVSSHVTAITREKTVDVDLQYMAKAPR*
Ga0126379_1191181713300010366Tropical Forest SoilQGEVFDSAYLSEYIPAARKLLPANLDWDVASHVTANVKDKSVDVDLIYTAKAPK*
Ga0126381_10352142613300010376Tropical Forest SoilGEVFDATYLAEYLPAAHKLLPPSLDWEVEPHVTANVRDKTVDVDLIYSVKAPK*
Ga0126383_1112403813300010398Tropical Forest SoilKLRDVWKIRPGEVYDVTYLNGYLRDAYKLLPANFDWDVSSHVTANIRDKTVDVDLIYAVKATK*
Ga0134127_1335916713300010399Terrestrial SoilKIRPGEIYNSTYLSEYLPTAQRLLPPTLDWEVSPHVTPNVRDKTVDVDLIYTAKAPK*
Ga0126361_1118337313300010876Boreal Forest SoilWKIRPGEVYDSTYLSEYLPAAHKLLPATLDWDVASHATANVRDKTVDVDLIYSVKAPK*
Ga0137381_1129429513300012207Vadose Zone SoilEVYDATYLAEYLPVAHKLLPPSLDWEVSPHVTANVRDKTVDVDLIYSVNAPK*
Ga0137381_1135561123300012207Vadose Zone SoilAWKIRPGEVYDSTYLSEYLPAAQKLLPSNLDWEAASHVTANVRDKTVDVDLIYAVKAPK*
Ga0137372_1017760033300012350Vadose Zone SoilDNTLMAKLRDAWKIRPGEVYDSTYLSEYLVAAQRLLPPALDWDVATHVTPNVRDKTVDVDLIYSVKAPK*
Ga0137419_1155201113300012925Vadose Zone SoilLANSLTSKRRNAWKIRSGETYDSTYLSEYLPAAHNLLPPSLDWEVASHVTANVRDKSVDVDLIYSVKAPK*
Ga0137416_1136325013300012927Vadose Zone SoilAWSLRPGDVYDATYVNRYLPQANKLLPATLDWGVAVHVTANVRDKTVDVDLQYTARAPR*
Ga0164304_1151681013300012986SoilTAKLRNAWKIRPGEVYNSTYLSEYLPAAQRLLPPTLDWEVSPHVTPNVRDKTVDVDLIYTAKAPK*
Ga0157372_1001435813300013307Corn RhizosphereRNAWKIRPGEIYNSTYLSEYLPTAQRLLPPTLDWEVSPHVTPNVRDKTVDVDLIYTAKAPK*
Ga0181537_1085887113300014201BogLRPGDVYDATYLKQFLPQARKLLPPTLDWDVATHVTALTGNKTVDVDLQYTAKAPQ*
Ga0181522_1071732413300014657BogGDVYDSTYLKQFLPQARKLLPANLDWEVTPHVTALAREKTVDVDLEYMAKAPQ*
Ga0137418_1078920423300015241Vadose Zone SoilLKLRAAWKLRQGDVYDSTYLREYLAQANKLLPAALDWEVTPHVTANVRDKTVDVDLQYTAKAPK*
Ga0182007_1043458913300015262RhizosphereRNAWKIRPGEIYNSTYLSEYLPAAQRLLPPTLDWEVSPHVTANVKDKTVDVDLIYSAKAPK*
Ga0132258_1215372443300015371Arabidopsis RhizosphereIRPGEVYDSTYLSEYLPAAQKLLPSGLDWDVASHVTANARDKTVDVDLIYSVKAPK*
Ga0182035_1193800913300016341SoilWKIRQGDVYDATYLSEYLPAAHKLLPSGLDWDVASHVTANARDKTVDVDLIYSVKAPK
Ga0182038_1058461313300016445SoilKLRNAWKIRQGEVYDATYLSEYLPAAHKLLPSGLDWDVASHVTANVRDKTVDVDLIYSVKAPR
Ga0187820_132143813300017924Freshwater SedimentNSLTAKLRSAWKIRPGDVYDSTYLSEYLPAAQKLLPVNLDWEVTPHVTANVREKTVDVDLIYSAKAPK
Ga0187814_1030925213300017932Freshwater SedimentKLRNAWKIRPGDAYDSTYLSEYLPAAHKLLPPAFDWELASHVTANVRDKTVDVDLIYSVKAPK
Ga0187801_1007811423300017933Freshwater SedimentIRAGDVYDASYLSEYLPAAHKLLPASLDWEVASHVTANVREKTVDVDLIYTVKAPK
Ga0187848_1049194813300017935PeatlandAAWKIRPGDVYDATYLNEFLPQARKLLPSTIDWEVSPHVTAMAKDKTVDVDLQYTAKAPQ
Ga0187847_1026590513300017948PeatlandKLREAWKIRPGEVYDATYLDQYLPLANKLLPTSLDWEVTPHVTPNIHDKTVDVDLQYSVKAPH
Ga0187776_1146910913300017966Tropical PeatlandTAKLRNAWKIRPGEVYDATYLSEYLPAAHRLLPPALDWDVTSHVTANVHDQTVDIDLIYAVKAPK
Ga0187783_1080460123300017970Tropical PeatlandWKLRKGDVYDASYLKQYLPVARKLLPASLDWDISTHVTPIATDKTVDVDIQCTAKAAQ
Ga0187783_1096773813300017970Tropical PeatlandPGEVYDATYLTEYLPAAHKLLPASLDWEVEPHVTPNIRDKTVDVDLIYSVKAPK
Ga0187783_1114775313300017970Tropical PeatlandDNNLTARLRNAWKLRSGDVYDASYLKEFLPQSRKLLPANMDWDIDPHVTAMAKEKTVDVDLQYTAKAPR
Ga0187780_1049698413300017973Tropical PeatlandNSLTAKLRDAWKLRRGDVYDANYLDSYLPEARKLLPSRLDWEVSPHVTANIRDKTVDVDLIYSVKAPE
Ga0187804_1023137323300018006Freshwater SedimentKLRNAWKLRPGDVYDSTYLSEYLPAAHKLLPSGLDWDVSSHVTANLRDKTVDVDLIYSVKAPK
Ga0187810_1030145613300018012Freshwater SedimentDVYDSSYLVQYLPAAQKLLPASLDWEVASHVTPNVRDKTVDVDLVYSVKAPK
Ga0187869_1013522943300018030PeatlandRPGDVYDATYLQQFLPQARKLLPPTIDWDVSTHVTALPRDKTVDVDLQYMAKAPK
Ga0187883_1036843623300018037PeatlandDVYDSTYLSEYLPAAQKLLPPTLDWGVSSHVTANVRERTVDVDLIYSAKAPK
Ga0187871_1020575233300018042PeatlandGLDNGLMAKLREAWKIRPGDVYDATYLDEYLPAAHKLLPPSLDWEVAPHTTANLRDKTVDVDLIYSVKAPK
Ga0187890_1000036213300018044PeatlandAKLRAAWKIRPGDVYDATYLNEFLPQARKLLPSTIDWEVSPHVTAMAKDKTVDVDLQYTAKAPQ
Ga0187858_1087612123300018057PeatlandWRIRPGDVYDSTYLSEYLPAAQKLLPPTLDWGVSSHVTANVRERTVDVDLIYSAKAPK
Ga0187784_1002910863300018062Tropical PeatlandWKIRPGEVYDATYLTEYLPAAHKLLPASLDWEVEPHVTANIRDKTVDVDLIYSVKAPK
Ga0187784_1090628523300018062Tropical PeatlandRNAWKLRPGDVYDASYLDQYLPEARKLLPPNFDWEVSPHVTANVRDRSVDVDLIYSVKAPKQ
Ga0187772_1103822913300018085Tropical PeatlandWKLRPGDIYDAGYLDQYLPEARKLLPPNFDWEVSPHVTANIRDKTVDVDLIYSVKVPK
Ga0187771_1106427813300018088Tropical PeatlandNVWKLRQGDVYDATYLDAYLPEAHKLLPSRLDWEVEPHVTANVRDKTVDVDIVYSVRAPN
Ga0187771_1111557723300018088Tropical PeatlandWRLRPGDVYDASYLDQYLPEARKLLPPNFDWEVSPHVTANQRDKSVDVDLIYSVKAPK
Ga0187770_1017427613300018090Tropical PeatlandSLMAKLRTAWKIRPGDVYDSTYLSEYLVEARKLLPSRLDWDVTPHVTANARDKTVDVDLIYSVKAPK
Ga0187770_1090723123300018090Tropical PeatlandAWKLRQGDVYDGTYLDTYLTEAHKLLPSRLDWEVDPHVTANVRDKTVDVDIIYSVKAPN
Ga0193726_102728153300020021SoilRPFEIYDATYLGEYLPTAQKLLPAALDWEVTSHVTANVRDKTVDVDLIYSVKAPK
Ga0179592_1030375223300020199Vadose Zone SoilLMAKLRAAWKLRFGEIYDATYIDEYLPAAQKLLPANLDWDVVSHVTANVHDKTIDVDIIYSVKAPK
Ga0210407_1095616323300020579SoilLTAKLRNAWKIRAGEVYDSTYLDEYLPAALKLLPPTLDWDVASHATANDRDKTVDIDLIYTVKAPK
Ga0210399_1021599513300020581SoilLRPGDVYDATYLRQFLPQARKLLPATLDWDVATHVTALAASKTVDVDLQYTAKAPQ
Ga0210401_1109981213300020583SoilAWKIRPGDVYDATYLKQYLPQARKLLPTSVDWEVSTHVTALTRDKTIDVDLQYMAKAPK
Ga0210408_1094488723300021178SoilGEVYDSTYLSEYLPAAHKLLPPTLDWDVAPHVTANVRDKTVDVDLIYSVKAPK
Ga0210396_1021227113300021180SoilLQQFLPQARKLLPPTLDWEASTHVTALSRDKTVDVDIQYTAKAAR
Ga0210388_1145006713300021181SoilAWKIRPGEVYDSTYLDEYLPAALKLLPPTLDWDVASHVTANGREKTVDIDLIYTVKAPK
Ga0210388_1162578723300021181SoilGDVYDSTYLSDFLPAAEKLLPATLDWDVASHVTANVRDKSVDVDIIYSVKAPK
Ga0210393_1016288813300021401SoilDVYDTTYLSEYLPAALKLLPTTLDWDVASHVTANVRDKSVDVDLIYSVKAPK
Ga0210393_1036828013300021401SoilDPTYLNEFLPLARKLLPVTIDWEVAAHVTAIARDKTVDVDLQYTAKAPQ
Ga0210385_1084272223300021402SoilNNREARLRAAWKIRPGEVYDASYLNEFLPRARKLLPATVDWEVSSHITAIAKDKTVDVDLQYMAKAPR
Ga0210385_1126316513300021402SoilQQFLPQARKLLPPTLDWEASTHVTALSRDKTVDVDIQYTAKAAR
Ga0210389_1053918523300021404SoilLTARLRAAWKIRPGDVYDVTYLKRYLPEARKLLPPAFDWDVDPHVTPIVRDKTVDVDLQYTVKATQ
Ga0210386_1127847213300021406SoilAWKIRPGDVYDVTYIKRYLPEARKLLPPAFDWDVDPHVTPIVRDKTVDVDLQYTVKATQ
Ga0210383_1004446513300021407SoilYTALLRAAWKLRPGDVYDATYLRQFLPQARKLLPATLDWDVATHVTALAASKTVDVDLQYTAKAPQ
Ga0210383_1008955213300021407SoilYLRDFLPQARKLLPATLDWEVSSHVTAIARDRTVDVDLQYTAKAPQ
Ga0187846_1014719313300021476BiofilmTARLRAAWKLRPGDVYDASYLQQYLPVARKLLPANLDWEVTPHVTPSTRDKTVDVDLQYTAKATQ
Ga0224541_100372513300022521SoilRPGDVYDSTYLKQFLPQARRLLPPTLDWDVATHVTALTGNKTVDVDLQYTAKAPQ
Ga0212123_1066385213300022557Iron-Sulfur Acid SpringVYDATYLKDFLPLARKLLPVTIDWEVAPHVTAIARDKTVDVDLQYTAKAPQ
Ga0242654_1023849423300022726SoilDIYDASYLKEYLPKARKLLPANLDWEVAPHVTAMARDKTVDVDLQYTAKAPQ
Ga0228597_10791223300023012Plant LitterRPGDVYDATYLQQFLPQARKLLPVTVDWDVSSHVTAIAREKTVDVDLQYTAKATH
Ga0224565_102650413300024176Plant LitterLQRGDVYDSTYLSDYLPAALKLLPPTLDWEVAPHVTANVRDKSVDVDLIYSVKAPK
Ga0247668_110385113300024331SoilRAGEVYNSSYLSDYLPEARKLLPASLDWDVASHVTANVREKTVDVDLIYSAKAPR
Ga0179591_125092733300024347Vadose Zone SoilVTARLRDAWKIRAGEVYDATYINDYLHQARRMLTATLDWESSVHVTANVKDKTVDVDIIYSAKAPK
Ga0208935_101007313300025414PeatlandIRPGDVYDATYLKEFLPQARRLLPPTIDWDVAPHVTAIAKDKTVDVDLEYTAKAPK
Ga0207700_1184881923300025928Corn, Switchgrass And Miscanthus RhizosphereLRNAWKIRPGDVYDSTYLSEYLPAAQKLLPPAFDWEVSSHVTANQHDKTVDVDLIYSVKAAK
Ga0207664_1167899313300025929Agricultural SoilGEVYNSTYLSDYLPEARKLLPASLDWDVASHVTANVREKTVDIDLIYSAKAPR
Ga0208141_102586813300025988Rice Paddy SoilRNAWKIRPGEVYNAAYLSEYLPSAQKLLPPTLDWEVSPHVTANVRDKTVDVDLIYSAKAP
Ga0257154_104180713300026467SoilTAKLRSAWKIRPGEVYDSTYLSEYLPAAHKLLPPTLDWDVAPHVTANVRDKTVDVDLIYSVKAPK
Ga0209156_1010474033300026547SoilKIRPGEVYNSTYLSEYLPAAQRLLPPTLDWEVSPHVTANVKDQTVDVDLIYSAKAPK
Ga0209418_103195323300027371Forest SoilSLTAKLRNAWKIRPGEVYDATYLGEYLPEAHKLLPSGLDWDVTPHVTANLRDKTVDVDLIYAVKAPK
Ga0208324_118354423300027604Peatlands SoilNAWKIRPGDIYDSTYLSDYLPAAQKLLPANLDWEVASHVTANVREKTVDVDLIYSAKAPK
Ga0209221_100948613300027609Forest SoilNLTARLRAIWKLRPGDIYDANYLKEFLPQARKLLPPTMDWEVSSHVTAIAREKTVDVDLQYTAKAPQ
Ga0209106_111965313300027616Forest SoilAKLRSAWKLRQGYVYDATYLKEYLPEAHRLLPVNLDWEVTPHVTANIRDKTVDVDLQYTAKAPK
Ga0209007_100769013300027652Forest SoilKIRPGDVYDATYLEEYLPAAHKLLPPSLDWEVAPHTTANLRDKTVDVDLIYSVKAPK
Ga0209038_1005174213300027737Bog Forest SoilYDSTYLKQFLPQARKLLPPTIDWEVTPHVTAITRDQTVDVDLQYTAKAPQ
Ga0209656_1050960413300027812Bog Forest SoilAGDVYDASYLERYLPQARKLLPANVDWEVSSHVTAITREKIVDVDLQYMAKALR
Ga0209060_1056563913300027826Surface SoilAKLRNIWKLRQGEVYDATYLSEYLAEAHKLLPANLDWDVASHVTANVRDKTVDVDLIYSVKAPK
Ga0209773_1025705813300027829Bog Forest SoilTARLRAAWTLHPGDVYDATYLKKFLPEARKLLPPTLDWDVDPHVTAITRDKTVDVDLQYTAKAAP
Ga0209169_1048771323300027879SoilVYDSTYLSEYLPAAQKLLPPTLDWEVASHVTANGREKTVDVDLIYTAKAPK
Ga0209275_1005271413300027884SoilSLEAKLRNLWKIRQGEIFDSTYLSEYLPAARKQLPANLDWDVTSHVTANMRDKSVDVDLIYSAKAPK
Ga0209275_1073134913300027884SoilEVYDASYLNEFLPRARKLLPATVDWEVSSHITAIAKDKTVDVDLQYMAKAPR
Ga0209275_1093100813300027884SoilRPGEVYDSTYVSEYLPAAQKLLPSNLDWDVTPHVTANIRDKSVDVDLIYSVKAPK
Ga0209380_1042443823300027889SoilDASYLNEFLPRARKFLPATVDWEVSSHITAIAKDKTVDVDLQFMAKAPR
Ga0209067_1011288833300027898WatershedsLRNAWKLRPGDVYDSTYLSEYLPAAHKLLPSGLDWDVSSHVTANVRDKTVDVDLIYSVKAPK
Ga0209067_1043078713300027898WatershedsAWKLRQGDVFDASYLDQYLPEAQKLLPASLDWEVASHATANVRDKTVDVDLVCSVRAPK
Ga0209415_1059344813300027905Peatlands SoilAWKIRPGEVYDAGYLQQFLPLARKLLPASLDWEVSTHVTALARDKTVDVDIQYTAKAPR
Ga0209415_1067212823300027905Peatlands SoilAWKIRPGDVYDATYLNQFLPQARKLLPPSLDWEVDPHVTAITRDKIVDVDLQYTAKATQ
Ga0265351_100782613300028020SoilLRAAWTLRPGDIYDASYLEQFLPQASKLLPPTLDWEASTHVTALSGEKTVDVDIQYTAKATR
Ga0209526_1075685913300028047Forest SoilKDFLPQARKLLPPTLDWEVSSHVTALAHDRTVDVDLQYTAKAPQ
Ga0302219_1005140333300028747PalsaLRAAWKLRPGDVYDSTYLKQFLPQARRLLPPTLDWDVATHVTALTGNKTVDVDLQYTAKAPQ
Ga0302224_1005293333300028759PalsaGDVYDATYLKQFLPQARKLLPANLDWEVSTHVTAITREKAVDVDVQYMAKAPQ
Ga0302189_1038388923300028788BogLRAAWKLRPGDVYDATYLQQFLPQARKLLPPTIDWDVSTHVTALPRDKTVDVDLQYMAKAPK
Ga0302222_1019773913300028798PalsaRLRAVWKLRPGDVYDATYLQQFLPQARKLLPVTIDWDVSTHVTAIARDKTVDVDLQYTAKATR
Ga0302222_1038446613300028798PalsaDATYLEQFLPLARKLLPASLDWEVSTHVTALPSSKTVDVDLQYTAKAPQ
Ga0265338_1082813613300028800RhizosphereLEAKLRNLWKLRAGETYNSTYLSEYLPEAKKLLPASLDWDVASHVTANVREKTVDVDLIYTAKAPR
Ga0302228_1013646433300028808PalsaLDNSLMAKLRGIWKLQRGDVYDSTYLSEYLPAAQKLLPPTLDWEVAPHVTANVRDKSVDVDLIYSVKAPK
Ga0302230_1033453913300028871PalsaVYDASYLKQYLPQARKLLPASVDWEVSTHVTALVRDKTIDVDLQYMAKAPH
Ga0302229_1022482213300028879PalsaDSTYLKQFLPQARRLLPPTLDWDVATHVTALTGNKTVDVDLQYTAKAPQ
Ga0308309_1107518523300028906SoilLRAAWKLRSGDVYDATYLKQFLPQARKLLPANLDWEVSTHVTALTGSKTVDVDLQYTAKAPQ
Ga0311358_1045948933300029915BogGEVYDASYLKEFLPKAQKLLPPTMDWEVTPHVTALSRDKTVDVDLQYTAKAPQ
Ga0311352_1075246323300029944PalsaWKLRPGDVYDASYLKQFLPLARKLLPPSLDWEVSSHVTALTSSKTVDVDLQYTAKAPQ
Ga0302150_1033384213300029956BogYDSTYLKEFLPQARKLLPPSLDWEVSSHVTAIAREKTVDVDLQYTAKAPK
Ga0302302_133330413300029997PalsaDATYLKEFLPQARKLLPRTMDWDVTPHVTAMAKDRTVDVDLQYTAKAPQ
Ga0311339_1122198323300029999PalsaTYLKEFLPQARKLLPRTMDWDVTPHVTAMAKDRTVDVDLQYTAKAPQ
Ga0302306_10005460113300030043PalsaTYLKQFLPQARRLLPPTLDWDVATHVTALTGNKTVDVDLQYTAKAPQ
Ga0302282_135170623300030045FenSLTAKLRAAWKIRPGDVYDSTYLKEFLPQARKLLPPSLDWEVSSHVTAIAREKTVDVDLQYTAKAPK
Ga0302195_1024303023300030051BogAWRLRQGEVYDASYLKEFLPKAQKLLPPTMDWEVTPHVTALSRDKTVDVDLQYTAKAPQ
Ga0302177_1033857213300030053PalsaSLTAKLRTAWKLRPGDVYDSTYLSDYLPAAHKLLPPALDWEVQPHVTANVRDKTVDVDLIYSVKAPK
Ga0311353_1009542553300030399PalsaMAKLRSVWKIRPGDVYDSTYLSEYLPAAHKLLPGRFDWEVSSHVTANAKDKTVDVDLIYTVKAPK
Ga0307511_1023756523300030521EctomycorrhizaVYDGTYLKEFLPEANRLLPASIDWAVAVHVTPNAKDKTVDVDLQYAPKAPK
Ga0311355_1014289713300030580PalsaKEFLPLARKLLPGSLDWEVSPHATVLTGNKTVDVDLQYTAKAPQ
Ga0311355_1152124613300030580PalsaKIRPGDVYDSTYLSEYLPAAHKLLPGRFDWEVSSHVTANAKDKTVDVDLIYTVKAPK
Ga0310038_1036956023300030707Peatlands SoilARLRAAWKIRPGDVYDSTYLKEYLPLARKLLPPTLDWEVSPHVTAILRDKTVDVDLQYTAKAPQ
Ga0265762_103531323300030760SoilTAKLRNAWTIRPGDVYNAGYLEEYLPAARKLLPPTLDWDVSSHVTANLHDKTVDVDLIYSVKAPK
Ga0265750_100529513300030813SoilFLPQASKLLPPTLDWEASTHVTALSGEKTVDVDIQYTAKATR
Ga0075405_1192499323300030847SoilKIRPGDVYDSTYLSEYLPAAHKLLPPALDWEVAPHVTANVRDKTVDVDLIYSVKAPK
Ga0302314_1093618313300030906PalsaIDNNLTARLRAAWKLRPGDVYDSTYLKQFLPQARRLLPPTLDWDVATHVTALTGNKTVDVDLQYTAKAPQ
Ga0302314_1102037213300030906PalsaVRPGDVYDATYLKQFLPQARKLLPANLDWEVSTHVTAITREKAVDVDVQYMAKAPQ
Ga0302180_1025559123300031028PalsaKIRPGDVYDATYLEQFLPLARKLLPASLDWEVSTHVTALPSSKTVDVDLQYVAKAPQ
Ga0170824_10067717013300031231Forest SoilRLPAAWKLRPGDVYDASYLKQFLPQARKLLPANLDWEVTPHVTALTRDKTVDVDLQYTAKAPQ
Ga0302307_1032510413300031233PalsaWKLRPGDVYDATYLQQFLPQARKLLPVTIDWDVSTHVTAIARDKTVDVDLQYTAKATR
Ga0302324_10029787153300031236PalsaLRAVWKLRPGDVYDATYLKEFLPLARKLLPGSLDWEVSPHATVLTGNKTVDVDLQYTAKAPQ
Ga0302324_10090005813300031236PalsaRPGDVYDSTYLKEFLPQARKLLPPSLDWEVSSHVTAIAREKTVDVDLQYTAKAPK
Ga0302326_1001080013300031525PalsaDNSLTARLRDAWKLRPGEVYNAAYLDEYLPAARKLLPVNFDWEVSPHVTANVRERTVDVDLIYSVKAPK
Ga0302326_1072133113300031525PalsaGDVYDSTYLKEFLPQARKLLPPTIDWEVAPHVTAIAKDRTVDVDLQYTAKAPQ
Ga0310686_10192318123300031708SoilYDSTYLKEFLPQARKLLPPTLDWDVDPHVTAITRDKTVDVDLQYTAKATQ
Ga0310686_10240252013300031708SoilKIRAGEVYDSTYLDEYLPAALKLLPPTLDWDVASHATANDRDKTVDIDLIYTVKAPK
Ga0310686_10409987413300031708SoilLWKIRPGEVYDATYLKRFLPEARKLLPPSLDWEVDPHVTAITRDKTVDVDLQYTAKATQ
Ga0265342_1034952613300031712RhizosphereNSLTAKLRSVWKIRAGEVYDATYLSDYLPQAQKLLPANLDWEVSPHVTANIREKTVDVDLIYSVKAPK
Ga0307476_1000696113300031715Hardwood Forest SoilRLRAAWKIRSGEVYDATYLKQYLPEARKLLPVNLDWEVDPHVTAIARDKTVDVDLQYTAKAPR
Ga0307476_1013385413300031715Hardwood Forest SoilLTAKLRNAWKLRPGDVFDSTYLSEYLPAAHKLLPSGLDWDVSPHVTANARDKTVDVDLIYSVKAPK
Ga0307476_1029829523300031715Hardwood Forest SoilYDATYLKEFLPLARKLLPVTIDWEVDPHVTAIARDKTVDVDLQYTAKAPQ
Ga0307476_1089005313300031715Hardwood Forest SoilDATYLKEFLPKARKLLPPNLDWEVTSHVTAITRDKTVDVDLQYTAKATQ
Ga0307475_1131572013300031754Hardwood Forest SoilLDNGLTAKLRAAWKLRPGDVYDSTYLDEYLPQARKLLTATVDWEVSSHTTANQRDKTVDVDLQYSAKAMQ
Ga0310912_1090522913300031941SoilWKIRQGEIYDGTYLSEYLPAAHKLLPPGLDWDVSSHVTANGRDKTVDVDLIYSVKAPK
Ga0307479_1161787613300031962Hardwood Forest SoilAAWKIRPGDVYDATYLKQFLPQARKLLPASLDWEVEPHVTAITRDRTVDVDLQYTAKAPR
Ga0311301_1038098843300032160Peatlands SoilLRPGDVFDGTYLQNYLPEAQKLLPTRLDWEVSPHVTANVRDKTVDVDLIYSVRAPN
Ga0335079_1096071413300032783SoilWKLRSGDVYDANYLDEYLPAAHKLLPSTLDWDVDPHVTANLRDKTVDVDLVYSVKAPR
Ga0335080_1204358913300032828SoilLRPGDVYDATYLSEYLPAAHKLLPSGLDWDVSSHVTANVRDKTVDVDLIYSVKVPK
Ga0335081_1205040123300032892SoilKLRNAWKIRPGEVYNTTYLSEYLPAAQKLLPPTLDWEVSSHVTANLRDKTVDVDLIYSVKAPK
Ga0335072_1161580113300032898SoilRAGEVYNSTYLSEYLPEARKVLPASLDWDVASHVTANVREKTVDVDLIYSAKAPK
Ga0335077_1176683923300033158SoilAWKIRQGEVYDATYLSEYLPAAQKLLPSAFDWEVASHVTANVREKTVDVDLIYSVKAPK
Ga0370483_0044663_1176_13823300034124Untreated Peat SoilNNLTARLRAAWKLRPGDVYDATYLKQFLPQARKLLPPTLDWDVATHVTALTGNKTVDVDLQYTAKAPQ


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.