Metagenome / Metatranscriptome Family F025499

Basic Information
Family ID	F025499
Family Type	Metagenome / Metatranscriptome
Number of Sequences	201
Average Sequence Length	44 residues
Representative Sequence	MLGPGDTVPDATVWMAPREPATCSNLVAGRSALFLFFLFAWSST
Number of Associated Samples	161
Number of Associated Scaffolds	201

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	63.18 %
% of genes near scaffold ends (potentially truncated)	19.90 %
% of genes from short scaffolds (< 2000 bps)	83.58 %
Associated GOLD sequencing projects	152
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.51

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (98.010 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (19.900 % of family members)
Environment Ontology (ENVO)	Unclassified (26.368 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.269 % of family members)

Multiple Sequence Alignments

Select alignment to view:

Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60. 1KansclcFeb2_11452990 2ARcpr5yngRDRAFT_0176492 3JGI10213J12805_103313342 4JGI11615J12901_110181803 5A1565W1_101317376 6Ga0062593_1028669011 7Ga0062592_1003722472 8Ga0062592_1010307151 9Ga0062592_1014943841 10Ga0071328_1041542 11Ga0062594_1021697262 12Ga0062594_1030012302 13Ga0062594_1031002681 14Ga0066817_10042691 15Ga0066823_101101951 16Ga0066672_102172392 17Ga0066809_101167282 18Ga0066809_101664361 19Ga0066683_100147015 20Ga0066685_106365402 21Ga0070683_1000510534 22Ga0070683_1000534834 23Ga0070711_1003481553 24Ga0070700_1007358772 25Ga0068867_1018201901 26Ga0070685_101008473 27Ga0070698_1000248047 28Ga0070672_1003608741 29Ga0070686_1004472053 30Ga0066707_100250994 31Ga0066705_103171002 32Ga0066905_1002647002 33Ga0066905_1002939862 34Ga0066905_1007280272 35Ga0068861_1019446761 36Ga0081455_100106565 37Ga0081455_101547563 38Ga0081455_110245791 39Ga0075365_101767044 40Ga0066652_1016674542 41Ga0075417_103296282 42Ga0074055_100071802 43Ga0074048_134219572 44Ga0079222_116286421 45Ga0079220_103321532 46Ga0075428_1001583573 47Ga0075434_1010949663 48Ga0079217_105595952 49Ga0075429_1001117873 50Ga0075424_1019185523 51Ga0079216_108069021 52Ga0075419_106510832 53Ga0066710_1010429473 54Ga0099827_116883292 55Ga0111539_100800702 56Ga0111539_101165931 57Ga0111539_102748153 58Ga0075418_117449952 59Ga0066709_1005788783 60Ga0066709_1011412663 61Ga0114129_123133442 62Ga0114129_131691321 63Ga0105243_107491543 64Ga0111538_112575852 65Ga0075423_102594412 66Ga0075423_105403502 67Ga0105248_119237571 68Ga0105248_124652362 69Ga0105072_10558483 70Ga0105058_11553491 71Ga0126313_101034182 72Ga0126313_101845143 73Ga0126313_102006462 74Ga0126305_100010807 75Ga0126304_102227692 76Ga0126315_102124852 77Ga0126309_100736361 78Ga0134111_102913893 79Ga0105239_120646542 80Ga0134127_113401422 81Ga0134122_119191773 82Ga0134123_106876922 83Ga0151489_16018783 84Ga0105246_103501051 85Ga0137312_10046523 86Ga0137424_10271021 87Ga0137424_10410462 88Ga0137365_103710362 89Ga0137374_100013855 90Ga0137374_112349852 91Ga0137380_105724712 92Ga0137380_105753623 93Ga0137380_114745622 94Ga0137376_101909815 95Ga0137367_102991961 96Ga0137369_100509535 97Ga0137369_100612215 98Ga0137369_106094971 99Ga0137368_101942593 100Ga0150984_1107353291 101Ga0136635_100027794 102Ga0136635_103027702 103Ga0157284_100739882 104Ga0157285_103670502 105Ga0157286_100278372 106Ga0157308_103591151 107Ga0157306_102767132 108Ga0164300_110224002 109Ga0164298_111978332 110Ga0134110_105047932 111Ga0164306_105572702 112Ga0134075_104928592 113Ga0163163_124247581 114Ga0157376_107206763 115Ga0173480_112232502 116Ga0167629_11732402 117Ga0132255_1008657582 118Ga0184604_101424511 119Ga0184608_102052982 120Ga0184638_11494172 121Ga0184626_102412312 122Ga0184621_100247403 123Ga0184619_100179573 124Ga0184617_10373461 125Ga0184618_105010151 126Ga0184635_101348752 127Ga0184609_100134403 128Ga0184609_100544644 129Ga0184612_101487372 130Ga0066667_102898693 131Ga0173481_100349843 132Ga0173482_107967072 133Ga0173479_100474953 134Ga0173479_104471131 135Ga0193705_10655762 136Ga0193701_10461472 137Ga0193715_10976001 138Ga0193741_100013812 139Ga0193739_10563852 140Ga0193738_10134193 141Ga0193738_10280603 142Ga0210378_100114382 143Ga0210378_101120824 144Ga0210382_104490121 145Ga0193695_1000006113 146Ga0224452_10521593 147Ga0222623_100248191 148Ga0222623_103825751 149Ga0222622_101467492 150Ga0247786_10215532 151Ga0247790_100507691 152Ga0247801_10579151 153Ga0247802_10591231 154Ga0207688_103986653 155Ga0207663_109105823 156Ga0207659_113424781 157Ga0207686_102823372 158Ga0207709_104424563 159Ga0207691_103060382 160Ga0207661_100474835 161Ga0207661_101960173 162Ga0207640_118210981 163Ga0207683_103710893 164Ga0209266_10211935 165Ga0209056_104396541 166Ga0209056_104886883 167Ga0207981_10385612 168Ga0209887_10367723 169Ga0209811_100253873 170Ga0209814_101275783 171Ga0209481_103034191 172Ga0247828_110185122 173Ga0307295_100429972 174Ga0307322_100701572 175Ga0307285_101048231 176Ga0307311_101540841 177Ga0307319_100437842 178Ga0307318_100630703 179Ga0307318_101938863 180Ga0307320_101883643 181Ga0307320_103115592 182Ga0247825_105602162 183Ga0307302_100352063 184Ga0307302_106791561 185Ga0307312_102200752 186Ga0307312_104487783 187Ga0307286_100951631 188Ga0307278_1000001461 189Ga0307278_1000132713 190Ga0307278_100027828 191Ga0307278_101648301 192Ga0247826_104663362 193Ga0310892_107254611 194Ga0326597_113411652 195Ga0307416_1001716222 196Ga0310890_105596003 197Ga0310890_118428172 198Ga0307472_1014653682 199Ga0247830_100635314 200Ga0364931_0253335_181_315 201Ga0364943_0215982_599_709
Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60. 1KansclcFeb2_11452990 2ARcpr5yngRDRAFT_0176492 3JGI10213J12805_103313342 4JGI11615J12901_110181803 5A1565W1_101317376 6Ga0071328_1041542 7Ga0062594_1030012302 8Ga0066672_102172392 9Ga0066707_100250994 10Ga0066705_103171002 11Ga0066905_1002939862 12Ga0079217_105595952 13Ga0105248_124652362 14Ga0126313_101034182 15Ga0167629_11732402 16Ga0184604_101424511 17Ga0184609_100544644 18Ga0247790_100507691 19Ga0209056_104886883 20Ga0307320_101883643 21Ga0307302_106791561 22Ga0307312_104487783
Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44 1ARcpr5yngRDRAFT_0176492 2KansclcFeb2_11452990 3JGI10213J12805_103313342 4A1565W1_101317376 5Ga0062594_1021697262 6Ga0066672_102172392 7Ga0066809_101664361 8Ga0066685_106365402 9Ga0070698_1000248047 10Ga0066705_103171002 11Ga0066905_1002647002 12Ga0066905_1002939862 13Ga0081455_100106565 14Ga0081455_101547563 15Ga0081455_110245791 16Ga0066652_1016674542 17Ga0075417_103296282 18Ga0079222_116286421 19Ga0079217_105595952 20Ga0079216_108069021 21Ga0075419_106510832 22Ga0111539_101165931 23Ga0066709_1005788783 24Ga0114129_131691321 25Ga0105248_124652362 26Ga0105072_10558483 27Ga0126313_101034182 28Ga0126313_101845143 29Ga0126304_102227692 30Ga0126315_102124852 31Ga0137312_10046523 32Ga0137365_103710362 33Ga0137374_100013855 34Ga0137380_105724712 35Ga0137380_114745622 36Ga0137369_106094971 37Ga0137368_101942593 38Ga0136635_100027794 39Ga0136635_103027702 40Ga0157284_100739882 41Ga0157285_103670502 42Ga0157286_100278372 43Ga0157308_103591151 44Ga0134110_105047932 45Ga0164306_105572702 46Ga0134075_104928592 47Ga0173480_112232502 48Ga0167629_11732402 49Ga0184608_102052982 50Ga0184638_11494172 51Ga0184621_100247403 52Ga0184619_100179573 53Ga0184618_105010151 54Ga0184635_101348752 55Ga0184609_100544644 56Ga0066667_102898693 57Ga0193705_10655762 58Ga0193715_10976001 59Ga0193738_10280603 60Ga0210378_101120824 61Ga0210382_104490121 62Ga0224452_10521593 63Ga0222622_101467492 64Ga0207683_103710893 65Ga0307318_100630703 66Ga0307320_103115592 67Ga0307278_1000001461 68Ga0307278_1000132713 69Ga0307278_100027828 70Ga0310892_107254611 71Ga0326597_113411652 72Ga0307416_1001716222 73Ga0364931_0253335_181_315
Powered by MSAViewer

Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 6.94% β-sheet: 5.56% Coil/Unstructured: 87.50%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
Powered by Feature Viewer

Structure Viewer
WebGL does not seem to be available. This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser. For a list of supported browsers, refer to http://caniuse.com/#feat=webgl. Load File(s)

Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.51
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.51
Powered by PDBe Molstar

Pfam ID	Name	% Frequency in 201 Family Scaffolds
PF00578	AhpC-TSA	27.86
PF00246	Peptidase_M14	6.47
PF13302	Acetyltransf_3	5.97
PF08281	Sigma70_r4_2	3.48
PF03411	Peptidase_M74	3.48
PF04545	Sigma70_r4	2.49
PF07676	PD40	1.49
PF03080	Neprosin	0.50
PF01648	ACPS	0.50
PF12697	Abhydrolase_6	0.50

COG ID	Name	Functional Category	% Frequency in 201 Family Scaffolds
COG3770	Murein endopeptidase MepA (D-alanyl-D-alanine-endopeptidase)	Cell wall/membrane/envelope biogenesis [M]	3.48
COG0248	Exopolyphosphatase/pppGpp-phosphohydrolase	Signal transduction mechanisms [T]	1.00
COG0216	Protein chain release factor RF1	Translation, ribosomal structure and biogenesis [J]	0.50
COG1186	Protein chain release factor PrfB	Translation, ribosomal structure and biogenesis [J]	0.50

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.01 %
Unclassified	root	N/A	1.99 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.01 %
Unclassified	root	N/A	1.99 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.01 %
Unclassified	root	N/A	1.99 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	92.04 %
Unclassified	root	N/A	1.99 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	88.06 %
Unclassified	root	N/A	1.99 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	56.72 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	2.49 %
Unclassified	root	N/A	1.99 %

Name	Rank	Taxonomy	Distribution
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2.49 %
Unclassified	root	N/A	1.99 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	56.72 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	56.72 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2.49 %
Unclassified	root	N/A	1.99 %

Scaffold	Taxonomy	Length	IMG/M Link
2124908045\|KansclcFeb2_ConsensusfromContig587719	Not Available	659	Open in IMG/M
3300000043\|ARcpr5yngRDRAFT_c017649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	600	Open in IMG/M
3300000858\|JGI10213J12805_10331334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	599	Open in IMG/M
3300000953\|JGI11615J12901_11018180	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	625	Open in IMG/M
3300001536\|A1565W1_10131737	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6133	Open in IMG/M
3300004114\|Ga0062593_102866901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	551	Open in IMG/M
3300004480\|Ga0062592_100372247	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1122	Open in IMG/M
3300004480\|Ga0062592_101030715	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	755	Open in IMG/M
3300004480\|Ga0062592_101494384	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	648	Open in IMG/M
3300005045\|Ga0071328_104154	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2332	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	79.10%
Host-Associated	Host-Associated	20.90%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	11.94%
Plants	Host-Associated → Plants	20.90%
Terrestrial	Environmental → Terrestrial	67.16%

Habitat	Taxonomy	Distribution
Floodplain	Environmental → Terrestrial → Floodplain	1.00%
Freshwater	Environmental → Aquatic → Freshwater	2.49%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.98%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.93%
Roots	Host-Associated → Plants → Roots	1.00%
Sediment	Environmental → Aquatic → Sediment	9.45%
Soil	Environmental → Terrestrial → Soil	66.17%

Habitat	Taxonomy	Distribution
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.50%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.48%
Ice	Environmental → Aquatic → Freshwater → Ice	1.00%
Loam	Environmental → Terrestrial → Soil → Loam	6.47%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.50%
Sand	Environmental → Terrestrial → Soil → Sand	1.49%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.49%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.00%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.99%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.50%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	58.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.94%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	9.45%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.00%

Habitat	Taxonomy	Distribution
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.48%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.46%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.98%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.49%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.50%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.96%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.00%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.50%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	37.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.94%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	9.45%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.48%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.49%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.49%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.99%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.50%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.50%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	1.00%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.00%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.99%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.00%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.50%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.99%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.50%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.50%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.99%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.50%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.50%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.49%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.99%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.49%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	5.97%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.49%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.99%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.50%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.49%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.50%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.50%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.50%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.00%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	1.00%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.50%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.46%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.50%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.00%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	3.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	19.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.48%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.99%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.50%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.50%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.50%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.00%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.00%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.49%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.49%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.49%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.47%

Visualization
Download SVG Download PNG Download CSV
Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
3300000043	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis cpr5 young rhizosphere	Host-Associated	Open in IMG/M
3300000858	Soil microbial communities from Great Prairies - Wisconsin Native Prairie soil	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300001536	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-65cm-8A)- 1 week illumina	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005045	Permafrost microbial communities from Fox Tunnel, Fairbanks, Alaska, USA	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005146	Soil and rhizosphere microbial communities from Laval, Canada - mgHAB	Environmental	Open in IMG/M

Showing 1 to 10 of 161 entries

Previous1 2 3 4 5…17Next

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
KansclcFeb2_11452990	2124908045	Soil	MLDVGDQIPDVQVWMAPREPAICSNLVAGRSAVFLFFLFA
ARcpr5yngRDRAFT_0176492	3300000043	Arabidopsis Rhizosphere	MLGPGDTVPDATVWMAPREPATCSNLVAGRSALFLFFLFAWSST*
JGI10213J12805_103313342	3300000858	Soil	MLAAGDQVPDATVWLAPREQSTIADLVQDRAALFVFLLFAWSST*
JGI11615J12901_110181803	3300000953	Soil	PDARVWMAPREPASTENLVAGRSALFVFFLFAWSST*
A1565W1_101317376	3300001536	Permafrost	MLAPGDQVPDATVWLAPREPTGIRALVADAPTLFIFFLFAWSST*
Ga0062593_1028669011	3300004114	Soil	MLGAGDNVPDATVWMAPREPVICSNLTAGRSALFLFFLFAWSST*
Ga0062592_1003722472	3300004480	Soil	MLEPGATVPDARVWMAPREPASCVNLVAGRSALFVFFLFAWSST*
Ga0062592_1010307151	3300004480	Soil	VLGPGDNVPDATVWMAPREPAICSNLVAGRSALFLFFLFAWSST*
Ga0062592_1014943841	3300004480	Soil	VLRPGDQVPDATVWTTPREPATISELVEDAPALFLFFLFAWSST*
Ga0071328_1041542	3300005045	Permafrost	MLGVGDRIPDGEVWLAPRESAAIPDLVADGPALFLFFLFAWSST*
Ga0062594_1021697262	3300005093	Soil	MLEAGSKVPDARVWLAPREPASCENLVAGRSALFVFFLFAWSST*
Ga0062594_1030012302	3300005093	Soil	VLEPGDQIPEATVWMAPREPTTIADLVENAPALFLFFLFAWSST*
Ga0062594_1031002681	3300005093	Soil	MLRPGDQVPDATVWTTPREPATISELVEDAPALFLFFLFAWSST*
Ga0066817_10042691	3300005146	Soil	MLGPGANVPDATVWMAPREPAICSNLVAGRSALFLFFLFAWSST*
Ga0066823_101101951	3300005163	Soil	MLGPGDNVPDATVWMAPREPVICSNLVAGGSALFLFFLFAWSST*
Ga0066672_102172392	3300005167	Soil	VLALGDPVPEATVWLAPRERTTCRDLVAGGHGLFLFFLFAWSST*
Ga0066809_101167282	3300005168	Soil	MLETGSKVPDARVWLAPREPASCENLVAGRSALFVFFLFAWSST*
Ga0066809_101664361	3300005168	Soil	VLEPGANVPDATVWMAPREPAICSNLVAGRSALFLFFLFAWSST*
Ga0066683_100147015	3300005172	Soil	MLGPGDSVPDATVWMAPREPAICSNLVAGRSALFLFFLFAWSST*
Ga0066685_106365402	3300005180	Soil	LLGPGDSIPDAMVWMAPREPAICSNLVAGRSALFLFFLFAWSST*
Ga0070683_1000510534	3300005329	Corn Rhizosphere	MLEPGATVPDARVWMAPRDPVSCVNLVAGRAALFVFFLFAWSST*
Ga0070683_1000534834	3300005329	Corn Rhizosphere	MRVLSPGDTVPDATVWMAPREPVICSNLVAGRSALFLFFLFAWSST*
Ga0070711_1003481553	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VLNPGDNVPDATVWMAPREPAICSNLVAGRSALFLFFLFAWSST*
Ga0070700_1007358772	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MLEAGSKVPAARVWLAPREPASCENLVAGRSALFVFFLFAWSST*
Ga0068867_1018201901	3300005459	Miscanthus Rhizosphere	MLGPGDNVPDATVWMAPREPAICSNLVAGRSALFLFFLFAWSST*
Ga0070685_101008473	3300005466	Switchgrass Rhizosphere	MLEPGATVPDARVWMAPRDPVSCVNLVAGRAALLVFFLFAWSST*
Ga0070698_1000248047	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VLVPGDQVPDATVWMAPREPGRIPNLVDETPALFLFFLFAWSST*
Ga0070672_1003608741	3300005543	Miscanthus Rhizosphere	MLEPGATAPDARVWMAPRDPVSCVNLVAGRAALFVFFLFAWSST*
Ga0070686_1004472053	3300005544	Switchgrass Rhizosphere	MLEAGSKVPDARVWLAPREPVSCENLVAGRSALFVFFLFAWSST*
Ga0066707_100250994	3300005556	Soil	LLAPGDRIPEATVWLAPREQGTCADLVADQSGLFLFFLFAWAKSQ*
Ga0066705_103171002	3300005569	Soil	VLEPGDRVPDATVWLAPREQATCAELVENGHALFFFLLFAWSST*
Ga0066905_1002647002	3300005713	Tropical Forest Soil	VLAPGDQVPDAKVWLAPREPASCVNLVAGRSALFVFFLFAWSST*
Ga0066905_1002939862	3300005713	Tropical Forest Soil	VLAPGDRVPYATVGLAPREKVKIADLVEDRSALFVFLLLASSRSQ*
Ga0066905_1007280272	3300005713	Tropical Forest Soil	MLGPGDSVPDATVWMAPREPAICSNLVAGRSALFFFILFAWSST*
Ga0068861_1019446761	3300005719	Switchgrass Rhizosphere	VLEPGDQVPEATVWMAPREPTTIADLVENAPALFLFFLFAWSST*
Ga0081455_100106565	3300005937	Tabebuia Heterophylla Rhizosphere	VLGVGDPIPEASVWLAPREQTTLADLVADRAALFVFFLFAWSST*
Ga0081455_101547563	3300005937	Tabebuia Heterophylla Rhizosphere	MLAPGDRVPDAKVWLAPREQVAIADLVQDRSALFVFLLFAWSST*
Ga0081455_110245791	3300005937	Tabebuia Heterophylla Rhizosphere	MLQPGDKVPDAKVWLAPREPVICSNLVAGRSALFLFFLFAWSST*
Ga0075365_101767044	3300006038	Populus Endosphere	VLGPGDQVPDATVWLAPREQATIADLVQDRAALFVFLLFAWSST*
Ga0066652_1016674542	3300006046	Soil	MLKPGATVPDARVWLAPREPATCVNLVAGRSALFVFFLFAWSST*
Ga0075417_103296282	3300006049	Populus Rhizosphere	VIAPGDQIPDATVWLAPRERTTIADLVRDRAGLFVFLLFAWSST*
Ga0074055_100071802	3300006573	Soil	MLGPGDNVPDATVWMAPREPVICSNLVAGRSALFLFFLFAWSST*
Ga0074048_134219572	3300006581	Soil	MLTPGDNVPDATVWMAPREPAICSNLVAGRSALFLFFLFAWSST*
Ga0079222_116286421	3300006755	Agricultural Soil	VLGPGDPVPDATVWMAPREPVICSNLVAGRSALFFYFLFAWSST
Ga0079220_103321532	3300006806	Agricultural Soil	MLEPGAPVPDARVWMAPREPASCVNLVAGRSALFVFFLFAWSST*
Ga0075428_1001583573	3300006844	Populus Rhizosphere	VIAPGDQVPDATVWLAPRERTTIADLVQDRAGLFVFLLFAWSST*
Ga0075434_1010949663	3300006871	Populus Rhizosphere	LSPGDNVPDARVWMAPREPAICSNLVAGRSALFFFFLFAWSST*
Ga0079217_105595952	3300006876	Agricultural Soil	SVSHTRAVLAPGDRIPDGQVFVAPREAAQLRDLVADGPALFLFFLYAWSST*
Ga0075429_1001117873	3300006880	Populus Rhizosphere	VIAPGDQIPDATVWLAPRERTTIADLVQDRAGLFVFLLFAWSST*
Ga0075424_1019185523	3300006904	Populus Rhizosphere	SKVPDARVWLAPREPASCENLVAGRSALFVFFLFAWSST*
Ga0079216_108069021	3300006918	Agricultural Soil	VLAPGDQVPDATVWLAPRETAQLPELVEDAAALFVFFLFAWSST*
Ga0075419_106510832	3300006969	Populus Rhizosphere	VLGPGDRVPDATVWLAPREPATIADLVEDRSALFLFLLFAWSST*
Ga0066710_1010429473	3300009012	Grasslands Soil	LLTVGDQIPEATVWLAPREPTTTMALVEEAPALFLFFLFAWSST
Ga0099827_116883292	3300009090	Vadose Zone Soil	LAVGDRIPEATVWLAPREQTTTMALVEDAPALFLFFLFAWSST*
Ga0111539_100800702	3300009094	Populus Rhizosphere	MLEAGSEVPDARVWLAPREPASCENLVAGRSALFVFFLFAWSST*
Ga0111539_101165931	3300009094	Populus Rhizosphere	VLGAGDHVPDATVWLAPREQATIADLVQDRAALFLFLLFAWSST*
Ga0111539_102748153	3300009094	Populus Rhizosphere	VLGAGDHVPDAKVWLAPREQATIADLVEDRAALFVFLLFAWSST*
Ga0075418_117449952	3300009100	Populus Rhizosphere	VLGPGDQVPDATVWLAPREQATIADLVQDRAALFLFLLFAWSST*
Ga0066709_1005788783	3300009137	Grasslands Soil	VLALGDRIPEATVWLAPREQTTTIALVEDAPALFLFFLFAWSST*
Ga0066709_1011412663	3300009137	Grasslands Soil	LLTVGDQIPEATVWLAPREPTTTMALVEEAPALFLFFLFAWSST*
Ga0114129_123133442	3300009147	Populus Rhizosphere	VLGPGDRIADATVWLAPREQATIADLVEDRSALFVFLLFAWSST*
Ga0114129_131691321	3300009147	Populus Rhizosphere	VLAPGDAVPEATVWLTPRESQTVASLVEDGHALFLFFLFAWSST*
Ga0105243_107491543	3300009148	Miscanthus Rhizosphere	MLEPGATVPDARVWMAPRDPASCVNLVAGRAALFVFFLFAWSST*
Ga0111538_112575852	3300009156	Populus Rhizosphere	VIEPGAKIPDARVWMAPREPVSCANLVAGRSALFVFFLFAWSST*
Ga0075423_102594412	3300009162	Populus Rhizosphere	MLGPGDNIPDATVWMAPREPAICSNLVAGRSALFLFFLFAWSST*
Ga0075423_105403502	3300009162	Populus Rhizosphere	MLQPGDSVPDATVWMAPREPAICSNLVAGRSALFLFFLFAWSST*
Ga0105248_119237571	3300009177	Switchgrass Rhizosphere	MLEVGSKVPDARVWLAPREPVSCENLVAGRSALFVFFLFAWSST*
Ga0105248_124652362	3300009177	Switchgrass Rhizosphere	LLDSGAKIPAARVWLAPREPVSCENLVAGRSALFVFFLFAWSST*
Ga0105072_10558483	3300009818	Groundwater Sand	VLAPGDRVPEATVWLAPREPVTLTALVEDRAALFVFFLFAWSST*
Ga0105058_11553491	3300009837	Groundwater Sand	MLGVGDRIPDGQVWLAPRESAAIPDLVADGPALFLFFLFAWSST*
Ga0126313_101034182	3300009840	Serpentine Soil	VLAAGDRIPDARVWLGPREPAAMTELVAGSSALFLFFLFAWSST*
Ga0126313_101845143	3300009840	Serpentine Soil	MLGVGDHVPDGKVWLAPRESAAIPDLFADGPALVLFFLF
Ga0126313_102006462	3300009840	Serpentine Soil	MLGVGDRIPDGKVWLAPRESAAIPDLVADGPALFLFFLFAWSST*
Ga0126305_100010807	3300010036	Serpentine Soil	MLEAGSKVPDARVWLAPREPVSCEDLVAGRSALFVFFLFAWSST*
Ga0126304_102227692	3300010037	Serpentine Soil	MLAAGDRVPEATVWLGPREPTTMAALVEDRAALFVFFLFAWSST*
Ga0126315_102124852	3300010038	Serpentine Soil	VLKVGKRVPEATVWMAPREPTTIAELVVDASALFFFFLFAWSST*
Ga0126309_100736361	3300010039	Serpentine Soil	MIEPGERVPGATVWMAPREPTTIADLVAEAPALFLFFLFAWSST*
Ga0134111_102913893	3300010329	Grasslands Soil	MLGPGDSVPDATVWMAPSEPAICSNLVAGRSALFLFFLFAWSST*
Ga0105239_120646542	3300010375	Corn Rhizosphere	MLGPGDNVPDATVWMAPREPAICSNLVAGRSALLFFFLFAWSST*
Ga0134127_113401422	3300010399	Terrestrial Soil	MLEPGATVPDARVWLAPREPATGVNLVAGRSALFVFFLFAWSST*
Ga0134122_119191773	3300010400	Terrestrial Soil	SDATVWMVFREPAICSNLVAGRSALFLFFLFAWSST*
Ga0134123_106876922	3300010403	Terrestrial Soil	VLAAGDQVPEATVWMAPREPTTIADLVENAPALFLFFLFAWSST*
Ga0151489_16018783	3300011106	Soil	PDATVWMAPREPAICSNLVAGRSALFLFFLFAWSST*
Ga0105246_103501051	3300011119	Miscanthus Rhizosphere	HVLKPGDRAPDARVWMAPREPVTCTNLVAGRSALFVFFLFAWSST*
Ga0137312_10046523	3300011400	Soil	VLAPGDRVPDATVWLAAREQATCSGLVEDRAALFVFFLFAWSST*
Ga0137424_10271021	3300011412	Soil	GQVWLAPRESAAIPDLVADGPALFLFFLFAWSST*
Ga0137424_10410462	3300011412	Soil	VLGVGDRIPDGQVWLAPRESAAIPHLVADGPALFLFFLFAWS*
Ga0137365_103710362	3300012201	Vadose Zone Soil	MLEPGQRVPGVTVWMAPREPTTISDLVQDAAPALFLFFLFAWSST*
Ga0137374_100013855	3300012204	Vadose Zone Soil	VLETGERIPDATVWLAPREPTTMEGLVEDAPALFLFFLFAWSST*
Ga0137374_112349852	3300012204	Vadose Zone Soil	MLEPGQRVPEATVWMAPREPTTVADLVAEAPALFLFFLFAWSST*
Ga0137380_105724712	3300012206	Vadose Zone Soil	LLTTGDRIPEAKVWLAPREPTTTTALVEDAPALFLFFLFAWSST*
Ga0137380_105753623	3300012206	Vadose Zone Soil	LLAPGDRIPEAAVWSAPREQATCADLVADQSGLFLFFLFAWAKSQ*
Ga0137380_114745622	3300012206	Vadose Zone Soil	VIAAGERIPEATVWLAPREQTTTTALVADGHALFLFFLFAWSST*
Ga0137376_101909815	3300012208	Vadose Zone Soil	LLAPGDRIPEATVWLAPREQATCADLVADQSGLFLFFLFAWAKSQ*
Ga0137367_102991961	3300012353	Vadose Zone Soil	VPGATVWMAPREPTTIADLVVEAPALFLFFLFAWSST*
Ga0137369_100509535	3300012355	Vadose Zone Soil	VLETGDRIPDATVWLAPREPTTMEGLVEDAPALFLFFLFAWSST*
Ga0137369_100612215	3300012355	Vadose Zone Soil	VLAPGDRIPDATVWLAPREPATVADLVEDAPALFLFFLFAWSST*
Ga0137369_106094971	3300012355	Vadose Zone Soil	VLADGEGVPEATVWLAPREPTTMEGLVEDAPALFLFFLFAWSST*
Ga0137368_101942593	3300012358	Vadose Zone Soil	VLAPGDRIPDATVWLAPREPATVADLVDDAPALFLFFLFAWSST*
Ga0150984_1107353291	3300012469	Avena Fatua Rhizosphere	DARVWLAPHEPATCVNLVVGRSALFVFFLFAWSST*
Ga0136635_100027794	3300012530	Polar Desert Sand	VLASGDQVPDATVWLAPRETARIPELVDDAAALFAFFLFAWSST*
Ga0136635_103027702	3300012530	Polar Desert Sand	MLGVGDRVPDGKVWLAPRQSVRIPDLVADGPALFLFFLFAWTST*
Ga0157284_100739882	3300012893	Soil	MLEPGATVPDALVWMAPRDPVSCVNLVAGRAALFVFFLFAWSST*
Ga0157285_103670502	3300012897	Soil	MLEPGATIPDARVWMAPREPVSCTNLVAGRSALFVFFLFAWSST*
Ga0157286_100278372	3300012908	Soil	VLAPGDQVPDATVWTTPREPATISELVEDAPALFLFFLFAWSST*
Ga0157308_103591151	3300012910	Soil	VLEPGGQVPEATVWMAPREPTTIADLVENAPALFLFFLFAWSST*
Ga0157306_102767132	3300012912	Soil	VLEPGDQVPEATVWMAPREPTTIADLVVNAPALFLFFLFAWSST*
Ga0164300_110224002	3300012951	Soil	MLGPGDHVPDATVWMAPREPANCSNLVAGRSALFLFFLFAWSST*
Ga0164298_111978332	3300012955	Soil	MLEAGSKAPAARVWLAPREPVSCENLVAGRSALFVFFLFAWSST*
Ga0134110_105047932	3300012975	Grasslands Soil	PVLMLEIGDQVPEATVWMAPREPTTIAELVVDASALFLFFLFAWSST*
Ga0164306_105572702	3300012988	Soil	MLGAGDNVPEATVWMAPREPVICSNLVAGRSALFLFFLFAWSST*
Ga0134075_104928592	3300014154	Grasslands Soil	LLTVGDRISEATVWLAPREPTTTMALVEEAPALFLFFLFAWSST*
Ga0163163_124247581	3300014325	Switchgrass Rhizosphere	GDTVPDATVWMAPREPVICSNLVAGRSALFLFFLFAWSST*
Ga0157376_107206763	3300014969	Miscanthus Rhizosphere	ARMLEPGATIPDARVWMAPREPVTCTNLVAGRPALFVFFLFAWSST*
Ga0173480_112232502	3300015200	Soil	MLGAGDNVPDATVWMAPREPTTIASLVEDRPALFLFFLFAWSST*
Ga0167629_11732402	3300015209	Glacier Forefield Soil	VLNPGDQVPDVTVWLAPRETSPVPELVADGSALFVFFLFAWSST*
Ga0132255_1008657582	3300015374	Arabidopsis Rhizosphere	VLGPGDIVPDATVWMAPREPVICSNLVAGRSALFLFFLFAWSST*
Ga0184604_101424511	3300018000	Groundwater Sediment	DQIPEAHVWLAPREPVTMSELVADGPALFVFFLFAWAKSQ
Ga0184608_102052982	3300018028	Groundwater Sediment	MLGVGDRIPDGQVWLAPRESAAIPDLVADGPALFLFFLFAWSST
Ga0184638_11494172	3300018052	Groundwater Sediment	MLGVGDRIPDGKVWLAPRESASIPDLVADGPALFLFFLFAWAKSQ
Ga0184626_102412312	3300018053	Groundwater Sediment	MLGVGDRIPDGQVWLAPRESAAISDLVADGPALFLFFLFAWSST
Ga0184621_100247403	3300018054	Groundwater Sediment	MIEPGERVPGATVWMAPREPTTIADLVAEAPALFLFFLFAWSST
Ga0184619_100179573	3300018061	Groundwater Sediment	LLSSGDRVPEAKVWLAPREPATCSELVADRSALFVFFLFAWSST
Ga0184617_10373461	3300018066	Groundwater Sediment	MLGVGDRIPEGQVWLAPRESAAIPDLVADGPALFLFFL
Ga0184618_105010151	3300018071	Groundwater Sediment	PVLMLQPGDQVPEATVWMAPREPTTISGLVEEAPALFLFFLFAWSST
Ga0184635_101348752	3300018072	Groundwater Sediment	VLGPGDRVPDATVWLAPRESKTVTELVEDRSALFVFLLFAWSST
Ga0184609_100134403	3300018076	Groundwater Sediment	MLQPGQRVPGATVWMAPREPTTIADLVVEAPALFLFFLFAWSST
Ga0184609_100544644	3300018076	Groundwater Sediment	VLAPGDQVPDTTVWLAPREPTKIAQLVDEAPALFLFFLFAWAKSQ
Ga0184612_101487372	3300018078	Groundwater Sediment	MLGVGDRIPDGKVWLAPRESASIPDLVADGPALFLFFLFAWSST
Ga0066667_102898693	3300018433	Grasslands Soil	LLAPGDRIPEATVWLAPREQGTCADLVADQSGLFLFFLFAWAKSQ
Ga0173481_100349843	3300019356	Soil	VLRPGDQVPDATVWTTPREPATISELVEDAPALFLFFLFAWSST
Ga0173482_107967072	3300019361	Soil	MLEPGATVPDARVWMAPREPASCVNLVAGRSALFVFFLFAWSST
Ga0173479_100474953	3300019362	Soil	VLEPGDQIPEATVWMAPREPTTIADLVENAPALFLFFLFAWSST
Ga0173479_104471131	3300019362	Soil	MLRPGDQVPDATVWTTPREPATISELVEDAPALFLFFLFAWSST
Ga0193705_10655762	3300019869	Soil	VLETGDQIPEAHVWLAPREPVTMSELIADGPALFVFFLFAWAKSQ
Ga0193701_10461472	3300019875	Soil	MLGPGDNVPDATVWMAPREPAICSNLVAGRSALFLFFLFAWSST
Ga0193715_10976001	3300019878	Soil	RVPDANVWLAPREPATTLSLVEDGPALFVFFLFAWAKSQ
Ga0193741_100013812	3300019884	Soil	MLAAGDQVPDATVWLAPREQSTIRDLVQDRAALFVFLLFAWSST
Ga0193739_10563852	3300020003	Soil	MLGVGDRIPDGQVWLAPRESAAIPALVADGPALFLFFLFAWSST
Ga0193738_10134193	3300020020	Soil	MLGVGDRIPDGQVWLAPRESAALPDLVADGPALFLFFLFAWSST
Ga0193738_10280603	3300020020	Soil	VLAPGDRVPEATVWLAPRESATVAELVQDRSALFFFFLFAWSST
Ga0210378_100114382	3300021073	Groundwater Sediment	MLGVGDRIPDGKVWLAPRESAAIPDLVADGPALFLFFLFAWSST
Ga0210378_101120824	3300021073	Groundwater Sediment	ARPVLEVGRRVPEATVWLAPREPTTIADLVGEAPALFLFFLFAWAKSQ
Ga0210382_104490121	3300021080	Groundwater Sediment	VLAPGSQVPDATVWLAPRESTRIRSLVDEAPALFLFFLFAWSST
Ga0193695_1000006113	3300021418	Soil	MLGVGDQVPGATVWMAPREPTTIAELVVDAPALFLFFLFAWSST
Ga0224452_10521593	3300022534	Groundwater Sediment	VLAPGDQVPDATVWLAPREPTRIPELVVDTPALFVFFLFAWSST
Ga0222623_100248191	3300022694	Groundwater Sediment	MLGVGDRIPEGQVWLAPRESAAIPDLVADGPALFLFFLF
Ga0222623_103825751	3300022694	Groundwater Sediment	MLGVGDRIPDGQVWLAPRETAAIPDLVADGPALFLFFLFAWSST
Ga0222622_101467492	3300022756	Groundwater Sediment	MLEAGATAPDARVWLAPREPATCADLAAGRAALFVFFLFAWSST
Ga0247786_10215532	3300022883	Soil	VLEPGDQVPEATVWMAPREPTTIADLVENAPALFLFFLFAWSST
Ga0247790_100507691	3300022915	Soil	DQVPDATVWTTPREPATISELVEDAPALFLFFLFAWSST
Ga0247801_10579151	3300023064	Soil	VLGPGDNVPDATVWMAPREPAICSNLVAGRSALFLFFLFAWSST
Ga0247802_10591231	3300023077	Soil	PDARVWMAPREPASCVNLVAGRSALFVFFLFAWSST
Ga0207688_103986653	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MLEPGATVPDARVWMAPRDPVSCVNLVAGRAALFVFFLFAWSST
Ga0207663_109105823	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	VLNPGDNVPDATVWMAPREPAICSNLVAGRSALFLFFLFAWSST
Ga0207659_113424781	3300025926	Miscanthus Rhizosphere	PGATVPDARVWMAPRDPVSCVNLVAGRAALFVFFLFAWSST
Ga0207686_102823372	3300025934	Miscanthus Rhizosphere	MLEAGSKVPDARVWLAPREPVSCENLVAGRSALFVFFLFAWSST
Ga0207709_104424563	3300025935	Miscanthus Rhizosphere	NVPDATVWMAPREPAICSNLVAGRSALFLFFLFAWSST
Ga0207691_103060382	3300025940	Miscanthus Rhizosphere	MLEPGATAPDARVWMAPRDPVSCVNLVAGRAALFVFFLFAWSST
Ga0207661_100474835	3300025944	Corn Rhizosphere	MLEAGSKVPDARVWLAPREPASCENLVAGRSALFVFFLFAWSST
Ga0207661_101960173	3300025944	Corn Rhizosphere	MRVLSPGDTVPDATVWMAPREPVICSNLVAGRSALFLFFLFAWSST
Ga0207640_118210981	3300025981	Corn Rhizosphere	VIEPGAKIPDARVWMAPREPVSCANLVAGRSALFVFFLFAWSST
Ga0207683_103710893	3300026121	Miscanthus Rhizosphere	VLKPGDRAPDARVWMAPREPVTCANLVAGRSALFVFFLFAWSST
Ga0209266_10211935	3300026327	Soil	MLGPGDSVPDATVWMAPREPAICSNLVAGRSALFLFFLFAWSST
Ga0209056_104396541	3300026538	Soil	EATVWLAPREQATCADLVADQSGLFLFFLFAWAKSQ
Ga0209056_104886883	3300026538	Soil	CRRVRNLLTTGDRIPEAKVWLAPREPTTTTALVEDAPALFLFFLFAWSST
Ga0207981_10385612	3300027560	Soil	MLETGSKVPDARVWLAPREPASCENLVAGRSALFVFFLFAWSST
Ga0209887_10367723	3300027561	Groundwater Sand	VLAPGDRVPEATVWLAPREPVTLTALVEDRAALFVFFLFAWSST
Ga0209811_100253873	3300027821	Surface Soil	MLGPGANVPDATVWMAPREPAICSNLVAGRSALFLFFLFAWSST
Ga0209814_101275783	3300027873	Populus Rhizosphere	VIAPGDQIPDATVWLAPRERTTIADLVRDRAGLFVFLLFAWSST
Ga0209481_103034191	3300027880	Populus Rhizosphere	VIAPGDQVPDATVWLAPRERTTIADLVQDRAGLFVFLLFAWSST
Ga0247828_110185122	3300028587	Soil	VLGAGDQVPDATVWLAPREQATIADLVQDRAALFVFLLFAWSST
Ga0307295_100429972	3300028708	Soil	MLEPGATIPDARVWMAPREPVSCVNLVAGRSALFVFFLFAWSST
Ga0307322_100701572	3300028710	Soil	MLEPGATIPDARVWMAPREPVSCVDLVAGRSALFVFFLFAWSST
Ga0307285_101048231	3300028712	Soil	MLEPGATIPDARVWMAPREPVTCANLVAGRSALFVFFLFAWSST
Ga0307311_101540841	3300028716	Soil	RPVLETGDQIPEAHVWLAPREPVTMSELIADGPALFVFFLFAWAKSQ
Ga0307319_100437842	3300028722	Soil	MLGAGDRIPDGKVWLAPRESAAIPDLVADGPALFLFFLFAWSST
Ga0307318_100630703	3300028744	Soil	MLAPGDQVPDATVWMAPRERTTISALVHDAPALFLFFLFAWSST
Ga0307318_101938863	3300028744	Soil	MLGPGDNVPDATVWMAPREPAICSNLVAGRSALFLFFLFAWSKSQSERTTP
Ga0307320_101883643	3300028771	Soil	QSWAYRVGPVLSAGDNVPDATVWMAPREPAICSNLVAGRSALFLFFLFAWSST
Ga0307320_103115592	3300028771	Soil	MLEPGDQVPDATVWMAPREPTTIADLVEDAPALFVFFLFAWSST
Ga0247825_105602162	3300028812	Soil	VLGPGDQVPEATVWLAPREPATIADLVEDRSALFVFLLFAWSST
Ga0307302_100352063	3300028814	Soil	MLDVGDRIPDGKVWLAPRESASIPDLVADGPALFLFFLFAWSST
Ga0307302_106791561	3300028814	Soil	MLEPGATIPDARVWMAPREPVSCVDLVAGRSALFVFFLFA
Ga0307312_102200752	3300028828	Soil	MLGVGDQVPEATVWMAPREPTTIAELVVDAPALFLFFLFAWSST
Ga0307312_104487783	3300028828	Soil	VPGAMVWMAPREPTTIADLVAEAPALFLFFLFAWSST
Ga0307286_100951631	3300028876	Soil	MLEPGATTPDARVWMAPREPVTCANLVAGRSALFVFFLFAWSST
Ga0307278_1000001461	3300028878	Soil	VLEVGRCVPEATVWLAPREPTTIADLVAEAPALFLFFLFAWSST
Ga0307278_1000132713	3300028878	Soil	MLEPGQRVPGATVWVAPREPTTIADLVVEAPALFFFFLFAWSST
Ga0307278_100027828	3300028878	Soil	MLQPGQLVPGATVWMAPREPTTIADLVVEAPALFFFFLFAWAKSQ
Ga0307278_101648301	3300028878	Soil	VLEVGKRFPEATVWMAPREPTTIADLVAEAPALFLFFLFAWSST
Ga0247826_104663362	3300030336	Soil	VLGAGDHVPDANVWLAPREQATIADLVQDRAALFVFLLFAWSST
Ga0310892_107254611	3300031858	Soil	VLAPGDQVPEATVWMAPREPTSISGLVEDAPALFLFILFAWSST
Ga0326597_113411652	3300031965	Soil	LLAPGDQVPEATVWLAPREPTTIPELVSEAPALFVFFLFAWSST
Ga0307416_1001716222	3300032002	Rhizosphere	VLVPGDQVPDATVWLAPRLPATIADLVQDRAALFVFLLFAWS
Ga0310890_105596003	3300032075	Soil	VLGPGDQVPDATVWLAPREQATIADLVQDRAALFLFLLFAWSST
Ga0310890_118428172	3300032075	Soil	PDATVWMAPREPAICSNLVAGRSALFLFFLFAWSST
Ga0307472_1014653682	3300032205	Hardwood Forest Soil	MLGPGDSVPDATVWMAPREPAICSNLVAGRSAIFLFFLFAWSST
Ga0247830_100635314	3300033551	Soil	VLGAGDQVPDATVWLARREQATIADLVQDRAALFVFLLFAWSST
Ga0364931_0253335_181_315	3300034176	Sediment	VIGPGEQIPAATVWLAPREPTTLAELVDEAPALFVFFLFAWSST
Ga0364943_0215982_599_709	3300034354	Sediment	MLGVGDRIPDGQVWLAPRESAAIPDLVADGPALFLFF

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F025499

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences