NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F025186

Metagenome / Metatranscriptome Family F025186

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F025186
Family Type Metagenome / Metatranscriptome
Number of Sequences 203
Average Sequence Length 42 residues
Representative Sequence ARTYGPPGLEADIEFCAQVDLLDNVPRFSRMVGNAAEIVA
Number of Associated Samples 168
Number of Associated Scaffolds 203

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.50 %
% of genes near scaffold ends (potentially truncated) 98.52 %
% of genes from short scaffolds (< 2000 bps) 93.60 %
Associated GOLD sequencing projects 165
AlphaFold2 3D model prediction Yes
3D model pTM-score0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (80.788 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(21.675 % of family members)
Environment Ontology (ENVO) Unclassified
(20.690 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(56.158 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.
1FACENCTA_4900060
2OU_02049010
3B3_v_00963200
4B_all_v_01773750
5FE1_01765950
6INPgaii200_09658651
7ICChiseqgaiiFebDRAFT_107104682
8JGI10214J12806_100567151
9JGI11615J12901_129218641
10A3PFW1_102686791
11Ga0063455_1004834281
12Ga0063356_1054821391
13Ga0062592_1016675311
14Ga0062594_1024583791
15Ga0066688_110195202
16Ga0070683_1011675472
17Ga0066388_1083018002
18Ga0070692_106738423
19Ga0070692_107187762
20Ga0070688_1010965411
21Ga0070711_1014951122
22Ga0070662_1013182152
23Ga0070706_1020775191
24Ga0070695_1012580112
25Ga0066701_103158001
26Ga0066695_101177594
27Ga0066707_103333242
28Ga0066698_104236442
29Ga0066703_104362941
30Ga0066708_101136171
31Ga0066654_107348681
32Ga0066706_109332442
33Ga0068852_1028002762
34Ga0066903_1038738681
35Ga0066903_1085097142
36Ga0081455_107245753
37Ga0066651_106139252
38Ga0066696_110422772
39Ga0066652_1016033471
40Ga0075363_1004076802
41Ga0075417_102631031
42Ga0074054_121223231
43Ga0079222_116570733
44Ga0066659_113519061
45Ga0075431_1004601132
46Ga0075433_109136453
47Ga0068865_1005278743
48Ga0075436_1011392081
49Ga0066710_1024213982
50Ga0099830_110793552
51Ga0111539_122211331
52Ga0105245_100474871
53Ga0066709_1025514042
54Ga0105243_118105193
55Ga0105855_11969841
56Ga0126307_107590911
57Ga0126307_108265561
58Ga0126374_101955871
59Ga0126313_108397942
60Ga0126305_101774812
61Ga0126305_103516691
62Ga0126305_106176112
63Ga0126304_102256913
64Ga0126315_107983462
65Ga0126380_122423681
66Ga0126311_111101981
67Ga0126384_120359781
68Ga0126382_115199311
69Ga0134082_103855172
70Ga0134066_102924112
71Ga0134125_129593891
72Ga0136449_1013491152
73Ga0151489_15078922
74Ga0151490_16598972
75Ga0120146_10526041
76Ga0120157_10997141
77Ga0136625_10811793
78Ga0137399_116080652
79Ga0137374_100061031
80Ga0137374_104887092
81Ga0137374_111659831
82Ga0137376_114211632
83Ga0137372_100926555
84Ga0137366_105061241
85Ga0137371_100313841
86Ga0137371_105269011
87Ga0150984_1015625361
88Ga0150984_1095307541
89Ga0136635_102043682
90Ga0136635_102393031
91Ga0136614_106808431
92Ga0157300_10688342
93Ga0157303_102915101
94Ga0157282_101111361
95Ga0157295_101501441
96Ga0157298_100767221
97Ga0157302_103067291
98Ga0137394_103970634
99Ga0153915_123480791
100Ga0164298_102487411
101Ga0164303_104893591
102Ga0164301_100246471
103Ga0164301_101076691
104Ga0164302_104261191
105Ga0134077_105626381
106Ga0134110_104020122
107Ga0164309_104507151
108Ga0164304_107716053
109Ga0164306_103552601
110Ga0164306_113340861
111Ga0157375_120518011
112Ga0163163_120791162
113Ga0120160_10259811
114Ga0132256_1011276361
115Ga0132256_1033905632
116Ga0132257_1023432591
117Ga0132255_1004032161
118Ga0184608_101898353
119Ga0184608_104803441
120Ga0187788_103263761
121Ga0187788_104376411
122Ga0184611_11963053
123Ga0184635_100321321
124Ga0184609_100087825
125Ga0190270_108091962
126Ga0193700_10222361
127Ga0193747_11430192
128Ga0193738_11892181
129Ga0193694_10383431
130Ga0126371_120519971
131Ga0224452_11972822
132Ga0222623_100774424
133Ga0222623_102630221
134Ga0247794_100590623
135Ga0247686_10532222
136Ga0207706_109135261
137Ga0207686_105967362
138Ga0207709_111685861
139Ga0207683_116895342
140Ga0209027_10785981
141Ga0209238_12670832
142Ga0209328_101881882
143Ga0209073_102062472
144Ga0209811_104412631
145Ga0209814_102439481
146Ga0209481_100539811
147Ga0265318_100440401
148Ga0247821_106787672
149Ga0247820_109194803
150Ga0307311_102655891
151Ga0307311_102724761
152Ga0307298_100058595
153Ga0307298_100944041
154Ga0307319_100649311
155Ga0307319_102139241
156Ga0307318_100794692
157Ga0307280_100371031
158Ga0307280_101909981
159Ga0307320_100325911
160Ga0307320_101075511
161Ga0307320_104553411
162Ga0307281_101531771
163Ga0307302_100251545
164Ga0307302_100674201
165Ga0307302_103556851
166Ga0307302_104112123
167Ga0307302_104672802
168Ga0307310_102457071
169Ga0307310_102851991
170Ga0307310_103517441
171Ga0307310_105847922
172Ga0307312_104110542
173Ga0307300_100033571
174Ga0247827_105611562
175Ga0247827_105707662
176Ga0247826_105912301
177Ga0318502_101085001
178Ga0318492_101539374
179Ga0318548_101106471
180Ga0318548_104117181
181Ga0318568_102960811
182Ga0318568_104739803
183Ga0307473_108066812
184Ga0307473_112048401
185Ga0318520_100517421
186Ga0307406_107629612
187Ga0307407_111369911
188Ga0308175_1000446976
189Ga0308175_1008253231
190Ga0307416_1007397741
191Ga0307416_1032354571
192Ga0318569_104149672
193Ga0318505_104762642
194Ga0318510_102914312
195Ga0318553_104357632
196Ga0318525_102755133
197Ga0335082_107344742
198Ga0335080_106181523
199Ga0335070_102220991
200Ga0335083_103106591
201Ga0247829_117323052
202Ga0247830_115953902
203Ga0364943_0306181_3_131
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 11.76%    β-sheet: 16.18%    Coil/Unstructured: 72.06%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

510152025303540ARTYGPPGLEADIEFCAQVDLLDNVPRFSRMVGNAAEIVASequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.40
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Polyangium
Unclassified
80.8%3.4%15.8%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Freshwater Wetlands
Polar Desert Sand
Groundwater Sediment
Groundwater Sediment
Soil
Soil
Vadose Zone Soil
Terrestrial Soil
Tropical Forest Soil
Serpentine Soil
Grasslands Soil
Grass Soil
Surface Soil
Peatlands Soil
Soil
Soil
Agricultural Soil
Permafrost
Soil
Soil
Grasslands Soil
Soil
Hardwood Forest Soil
Soil
Soil
Tropical Peatland
Permafrost Soil
Soil
Tropical Forest Soil
Forest Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Soil
Sediment
Arabidopsis Rhizosphere
Corn Rhizosphere
Tabebuia Heterophylla Rhizosphere
Arabidopsis Thaliana Rhizosphere
Miscanthus Rhizosphere
Miscanthus Rhizosphere
Populus Endosphere
Switchgrass Rhizosphere
Populus Rhizosphere
Rhizosphere
Miscanthus Rhizosphere
Miscanthus Rhizosphere
Rhizosphere
Corn Rhizosphere
Arabidopsis Rhizosphere
Avena Fatua Rhizosphere
21.7%5.4%4.4%8.4%6.4%4.4%3.4%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
FACENCTA_49000602032320003SoilALSGLNARTYGAPGLEEDIRFCAREDVLDVVPRLARVEGGAAEIVA
OU_020490102124908016YGPPGLEEDIAWCSQVSVLDIVPRFTRMLGSVAEVTR
B3_v_009632002124908039SoilYGPPGLEADIEFCAQVDLLDTVPRFSRMIGTAAEIRSES
B_all_v_017737502140918024SoilGPPGLEADIEFCAQVDLLDTVPRFSRMIGTAAEIRSES
FE1_017659502189573002Grass SoilVPLDGLNARTYGPSGLEEDIAYCAQEDLLTAVPEVTEATGVAAEIMLR
INPgaii200_096586512228664022SoilALDGLEARTYGPPGLEEDIAYCAQEDRLDVVPVLTGMEGAAAEIMLR
ICChiseqgaiiFebDRAFT_1071046823300000363SoilRTYGPPGLEDDIAFCARENALDVVPRLTGRVGPAVEIGLG*
JGI10214J12806_1005671513300000891SoilRTYGPPGLEEDIAFCARESVLDVVPRLVGAVGGAAEIMLR*
JGI11615J12901_1292186413300000953SoilARTYGPPGLEEDIAFCAQVNVLEVVPRLARMLDGAAEITLEARTAR*
A3PFW1_1026867913300001535PermafrostAYEALNARTYGPAGLEEDILFCSRESVLPVVPRFAGMAGAAAEIGP*
Ga0063455_10048342813300004153SoilRTYGPPGLEADVEYCARENILQTVPRFARMVGAAAEITA*
Ga0063356_10548213913300004463Arabidopsis Thaliana RhizosphereYGPPGLEEDIAFCSQVSVLETVPHLVGLVGPAAEIRASS*
Ga0062592_10166753113300004480SoilEALLARTYGPPGLEEDILFCSRESVLPVVPRFARMTGPAAEILS*
Ga0062594_10245837913300005093SoilPNALDGLNARTYGPPGLEDDLVFCARESVLEAVPRFAGMRGPAAEITLSPR*
Ga0066688_1101952023300005178SoilLNARTYGPPGLEDDIAFCARESVLDVVPQLVGRIGPAAEIALA*
Ga0070683_10116754723300005329Corn RhizosphereLNARTYGPPGLEDDLVFCARESVLEAVPRFAGMRGPAAEITLSPR*
Ga0066388_10830180023300005332Tropical Forest SoilARTYGPPGLEEDIAWCSQVSVLDVVPRLSRMLDRVAEVTL*
Ga0070692_1067384233300005345Corn, Switchgrass And Miscanthus RhizosphereARTYGPPGLEEDIAFCAQVGVLDIVPRLRRMVDGAAEITTD*
Ga0070692_1071877623300005345Corn, Switchgrass And Miscanthus RhizosphereDPLDGINARTYGPPGLEEDIAFCARASVLEVVPRLVGMRGPAAEITL*
Ga0070688_10109654113300005365Switchgrass RhizosphereTALLARTYGPPGLEEDILFCSRESVLPVVPRLAAVTDGAAEIVA*
Ga0070711_10149511223300005439Corn, Switchgrass And Miscanthus RhizosphereIDGINARTYGPPGLEEDIAWCSQVSVLDVVPRFTRMLESAAEVTL*
Ga0070662_10131821523300005457Corn RhizosphereARTYGPPGLEQDIAWVSQDNLLDVVPRLSRMVDGAAEIVA*
Ga0070706_10207751913300005467Corn, Switchgrass And Miscanthus RhizosphereRTYGPPGLEEDILFCSRESVLPVVPRLSGMVGVAAEIVP*
Ga0070695_10125801123300005545Corn, Switchgrass And Miscanthus RhizosphereRTYGPPGLEEDIAFCARENVLEVVPRLAGMVGSAAEITIS*
Ga0066701_1031580013300005552SoilGPPGLEADIEFCSHESAIDVVPRFRRMVGSAAEITQ*
Ga0066695_1011775943300005553SoilINARTYGPPGLEDDIAWCSQVDTLDVVPRFSRMAGAAAEVTL*
Ga0066707_1033332423300005556SoilARTYGPPGLEDDIAFCAREDVLDVVPRLAGMHGTAAEIRA*
Ga0066698_1042364423300005558SoilYGPPGLEADIEFCAQENLLETVPRFAQMAGPAAEIVA*
Ga0066703_1043629413300005568SoilSAGLNARTYGPPGLEEDIAFCAREDVLDAVPRVVGMHGTAAEISL*
Ga0066708_1011361713300005576SoilAAAGLNARTYGPPGLEEDIAFCAREDALDVVPRLSVMVGTAAEIRV*
Ga0066654_1073486813300005587SoilLNARTYGPPGLEADIEFCSRENTLDTVPRFGRMVGRAAEIVA*
Ga0066706_1093324423300005598SoilYGPPGLEEDIAFCAQVSVLDVVPRLARMIDGAAEITS*
Ga0068852_10280027623300005616Corn RhizosphereYGPPGLEEDILFCSRESVLPVVPRFARMTGPAAEIVA*
Ga0066903_10387386813300005764Tropical Forest SoilRTYGPPGLEADIAYCARENLLETVPRFARMHGSAAEITVLSG*
Ga0066903_10850971423300005764Tropical Forest SoilLAGLTARTYGPPGLEEDIAFCSQVSVLDTVPRLVGLVGPAADIRAS*
Ga0081455_1072457533300005937Tabebuia Heterophylla RhizosphereYADPVDGINARTYGPPGLEEDIAFVARVNALDVVPRLTGMVGGAAEIAL*
Ga0066651_1061392523300006031SoilTYGPPGLEDDIAWCSQVDTLDVVPRFSQMVGAAVEITL*
Ga0066696_1104227723300006032SoilTYGPPGLEEDIAFCVRESLLDVVPRVARVLPRAVEITG*
Ga0066652_10160334713300006046SoilNARTYGPPGLEADIEWCARESVLDVVPRLAGVADSAAEIVG*
Ga0075363_10040768023300006048Populus EndosphereARTYGPAGLEEDIAFCARESVLDVVPHLVGAVGGAAEIMLR*
Ga0075417_1026310313300006049Populus RhizospherePAGLEEDIAYCAQEDRLDVVPELTGMEGAAAEIMLR*
Ga0074054_1212232313300006579SoilYGPPGLEEDITFCAQVSVLDVVPRLGRMVDGAAEITAR*
Ga0079222_1165707333300006755Agricultural SoilRTYGPPGLEADIEFCAQVDALRTVPRFARLVGPAAEIVA*
Ga0066659_1135190613300006797SoilTYGPPGLEADIEFCAQVDVLDAVPRLAGMIGGAAEIRLA*
Ga0075431_10046011323300006847Populus RhizosphereAFPQSIDGINARTYGPPGLEEDIAWVSQDNLLEVIPRFTRMVDGAAEIVASDGASPRT*
Ga0075433_1091364533300006852Populus RhizosphereLLARTYGPPGLEEDILFCSRESVLPVVPRLAAVTDGAAEIVA*
Ga0068865_10052787433300006881Miscanthus RhizosphereLARTYGPPGLEEDIAFCAQVSALEVVPRLSRMVDGSAEITAR*
Ga0075436_10113920813300006914Populus RhizosphereRTYGPPGLEEDIAFCAQVSALEVVPRLSRMVDGSAEITAR*
Ga0066710_10242139823300009012Grasslands SoilFPDAVAGLNARTYGPPGLEEDIAFCAREDVLDVVPRLAGMVGTAAEIRR
Ga0099830_1107935523300009088Vadose Zone SoilGPPGLEEDIAFCARENALAVVPRLAGMVGPAAEITAS*
Ga0111539_1222113313300009094Populus RhizospherePQSIDGINARTYGPPGLEEDIAWVSQDNLLEVIPRFTRMVDGAAEIVASDGASPRT*
Ga0105245_1004748713300009098Miscanthus RhizosphereDAHDGLLARTYGPPGLEEDIAFCAQVGVLDIVPRLRRMVDGAAEITTD*
Ga0066709_10255140423300009137Grasslands SoilHEGLLARTYGPPGLEEDIAFCAQVGILDVLPRLSRMVDGSAEITRGET*
Ga0105243_1181051933300009148Miscanthus RhizosphereDPVDGINARTYGPPGLEDDLAFVARVDVLDVVPRLTGMVAGAAEIRA*
Ga0105855_119698413300009649Permafrost SoilPPGLEADIEFCAQVDLLDTVPRFTRMIGSAAEIVA*
Ga0126307_1075909113300009789Serpentine SoilDGIMARTYGPTGLEADIEFCSQENTIDVVPRFSRMVDGAAEIVG*
Ga0126307_1082655613300009789Serpentine SoilINARTYGPPGLEADIEWCSQVDTVTTVPRFSRMVGPAAEIVSS*
Ga0126374_1019558713300009792Tropical Forest SoilINARTYGPPGLEEDIAFVAQVSLLDVVPRFSRMVGPAAEVIL*
Ga0126313_1083979423300009840Serpentine SoilAGAFPEAIDGIKARTYGPPGLEDDIAWVSQVDLLDVVPRFTGVVEGAAEIRL*
Ga0126305_1017748123300010036Serpentine SoilGPPGLEADVEFCARESVLEAVPRFAGMRGPAAEIVV*
Ga0126305_1035166913300010036Serpentine SoilTAWDGIMARTYGPTGLEADIEFCSQENTIDVVPRFSRMVDGAAEIVG*
Ga0126305_1061761123300010036Serpentine SoilYGPPGLEEDIAWVAQDNLLDVVPRLSRMVDGAAEIVA*
Ga0126304_1022569133300010037Serpentine SoilPRSIDGINARTYGPPGLEEDIAWVAQDNLLDVVPRLSRMVDGAAEIVA*
Ga0126315_1079834623300010038Serpentine SoilYGPPGLEADIEFCARVDALDVVPRFSRLVGTAAEIIL*
Ga0126380_1224236813300010043Tropical Forest SoilTYGPPGLEEDIAFCAQVSVLDVVPRLDRMVDGSAEIAAR*
Ga0126311_1111019813300010045Serpentine SoilYPEALEGLNARTYGPPGLEADIRFCARVDALDVVPRFSRLVGTAAEIVP*
Ga0126384_1203597813300010046Tropical Forest SoilDAHDGLLARTYGPPGLEEDIAFCAQVSVLDVVPRLDRMVDGSAEIAAR*
Ga0126382_1151993113300010047Tropical Forest SoilGLLARTYGPPGLEEDIAFCAQVSVLEVVPRLDRMVDGSAEIAAR*
Ga0134082_1038551723300010303Grasslands SoilRFPDPVDGINARTYGPPGLEEDIAWVAQVDLLDVVPRFAGMMGPAAEVSL*
Ga0134066_1029241123300010364Grasslands SoilVEGINARTYGPPGLEEDIAWVAQVDLLDVVPRFAGMMGPAAEVSL*
Ga0134125_1295938913300010371Terrestrial SoilLRARRYGPPGLEADVEYCSRENLLPTVPRLARMVGPAAEIVA*
Ga0136449_10134911523300010379Peatlands SoilYGPPGLEADVEFCARVNMLETVPRYSRMIGPAAEIVA*
Ga0151489_150789223300011106SoilEAFNARTYGPPGLEEDIAFCARENVLDVVPRLVGMVGSAAEIRDS*
Ga0151490_165989723300011107SoilFNARTYGPPGLEEDIAFCARENVLDVVPRLVGMVGSAAEIRDS*
Ga0120146_105260413300011992PermafrostALEGLNARTYGPPGLEADIEFCAQVDLLDTVPRFARMVGSAAEIVA*
Ga0120157_109971413300011994PermafrostYGPPGLEEDIAWVSQVDLLDVVPRFTRLIDGAAEIRL*
Ga0136625_108117933300012091Polar Desert SandDARAGLTARSYGPPGLEEDIAWCARENALVVVPRLGGMEGSAAEIVVS*
Ga0137399_1160806523300012203Vadose Zone SoilARTYGPPGLEAEFEFCAQRDLLDVAPHLSRMIGTTAEIRREQ*
Ga0137374_1000610313300012204Vadose Zone SoilLNARTYGPPGLEDDIAFCSRESVLDVVPRLVGMVGVRPRK*
Ga0137374_1048870923300012204Vadose Zone SoilDGINARTYGPPGLEEDIAWCSRESVLTVVPRFSGMVGTAAEILA*
Ga0137374_1116598313300012204Vadose Zone SoilGLEEDIAFCAQISVLHVVPRLSRMVDGAAEITAR*
Ga0137376_1142116323300012208Vadose Zone SoilTARTYGPPGLDEDIRFCARDSVLDVVPCFVGMEGPAAAIRTVS*
Ga0137372_1009265553300012350Vadose Zone SoilNARTYGPSSLEADIEYCAQVDMLETVQRFARVVASDGEIVA*
Ga0137366_1050612413300012354Vadose Zone SoilRRSGLDADIAYCARVSTLDVVGRFSRMVGTAAEVVAA*
Ga0137371_1003138413300012356Vadose Zone SoilARTYGPPGLEDDIAWCSQVDTLDVVPRFSRMAGAAAEVTL*
Ga0137371_1052690113300012356Vadose Zone SoilARTYGPPGLEDDIAWCSQVDVLDVVPRFSQMVGAAAEVTL*
Ga0150984_10156253613300012469Avena Fatua RhizosphereEGLNARTCGPPGLEADIEFCSRENTLDTVPRFGRMVGRAAEISA*
Ga0150984_10953075413300012469Avena Fatua RhizospherePGLEEDIRFCAQVDLLATVPRFSRMVGAAAEIVA*
Ga0136635_1020436823300012530Polar Desert SandLNARAYGPPGLEEDIKFCVQEHTIDVVPRFSRMIAGAAEIFGACDPRE
Ga0136635_1023930313300012530Polar Desert SandLSALDGQLARTHGPPGLEEDIKFCVQEHTIDVVPRFSRMIAGAAEIFGACDPRE
Ga0136614_1068084313300012684Polar Desert SandARTYGPPGLEEDIAFCARESVLAVVPRFVGMQGNAAEIGL*
Ga0157300_106883423300012884SoilNARTYGPPGLEEDIEFCARANVLDVVPRLAGMVEGAAEITL*
Ga0157303_1029151013300012896SoilINARTYGPPGLEQDIAWVSQDNLLDVVPRLSRMVDGAAEIVA*
Ga0157282_1011113613300012904SoilLNARTYGPPGLEDDLVFCARESVLEAVPRFAGMRGPAAEIVL*
Ga0157295_1015014413300012906SoilLARTYGPPGLEDDIAFCAQVSVLDVVPRLSRMVDGAAEITLEARTAR*
Ga0157298_1007672213300012913SoilSIDGINARTYGPPGLEQDIAWVSQDNLLDVVPRLSHMVDGAAEIVA*
Ga0157302_1030672913300012915SoilYGPPGLEEDIAWCAQVSLHDIVPHFSRMVGPAAEVVL*
Ga0137394_1039706343300012922Vadose Zone SoilEGLNARTYGPPGLEADIEFCAQVDLLDVAPVLSRMIGTAAEIRRER*
Ga0153915_1234807913300012931Freshwater WetlandsRTYGPPGLEWDIEFCAQVDLLETVPRFARMVGPAAEIVATTDARTEE*
Ga0164298_1024874113300012955SoilPGLEADVEFCAQVDTLTTVPRFSRMVGAAAEIVDGGGPT*
Ga0164303_1048935913300012957SoilDAHDGLLARTYGPPGLEEDIAFCAQVGVLDVVPRLGRMVDGSAEITAR*
Ga0164301_1002464713300012960SoilLDAFNARTYGPSGLEQDIAICARVNLLDVVPRLVGMVGPAAEIRDS*
Ga0164301_1010766913300012960SoilEALLARTYGPPGLEEDILFCSRESVLPVVPRFARMTGPAAEIVP*
Ga0164302_1042611913300012961SoilARTYGPPGLEADVEFCAQVDLLGTVPRLARMVGNAAEIVA*
Ga0134077_1056263813300012972Grasslands SoilHEGLLARTYGPPGLEDDIAFCAQVSALDAVPRLSRMVDGSAEITTR*
Ga0134110_1040201223300012975Grasslands SoilFPSALAGLNARTYGPPGLEADIEFCAQENLLETVPRFAQMAGPAAEIVA*
Ga0164309_1045071513300012984SoilTYGPPGLEADIEFCAQVDLLQTVPRFSRMVGRAAEIVA*
Ga0164304_1077160533300012986SoilLLARTYGPPGLEEDIAFCAQVGVLDVVPRLGRMVDGSAEITAR*
Ga0164306_1035526013300012988SoilARTYGPPGLEADIEFCAQVDLLDNVPRFSRMVGNAAEIVA*
Ga0164306_1133408613300012988SoilGLLARTYGPPGLEEDIAFCAQVSVLDVVPRLSRMVDGSAEIAAR*
Ga0157375_1205180113300013308Miscanthus RhizosphereNSLDGLNARTYGPPGLEEDIAFCARENVLDTAPRVTGRVGPAVEIGLG*
Ga0163163_1207911623300014325Switchgrass RhizosphereALLARTYGPPGLEEDILFCSRESVLPVVPRLAGVDDGAAEIVA*
Ga0120160_102598113300014820PermafrostGLEADIEFCAQVDLLDVAPVLSRMIGKAAEIRRQP*
Ga0132256_10112763613300015372Arabidopsis RhizosphereARTYGPPGLEAEVEFCAQVDLLQTVPRLARMVGNAAEIVA*
Ga0132256_10339056323300015372Arabidopsis RhizospherePHSVDGINARTYGPPGLEEDIAWVSQDNLLNVVPRLSRMVDGAAEIVA*
Ga0132257_10234325913300015373Arabidopsis RhizosphereIDGLNARTYGPSGLEEDIAFCARENVLDVVPRVTGRVGPALEIGLG*
Ga0132255_10040321613300015374Arabidopsis RhizosphereIDGLNARTYGPPGLEEDIAFCARENVLDVVPRVTGRVGPALEIGLG*
Ga0184608_1018983533300018028Groundwater SedimentGPPGLEDDIAFCAQVSVLDVVPRLSRMVDGSAEITAR
Ga0184608_1048034413300018028Groundwater SedimentEALLARTYGPPGLEKDIAFCAQVDVLDVVPRFERMHGRAAEITKL
Ga0187788_1032637613300018032Tropical PeatlandRTYGPPGLEDDIAYCAQVDLLDVVPELTGVEGPAAEIVRR
Ga0187788_1043764113300018032Tropical PeatlandRTYGPPGLEADIEYCAREDALRTVPRFARLHGPAAEVVA
Ga0184611_119630533300018067Groundwater SedimentDAHEGLLARTYGPPGLEEDIAFCAQVSVLDVVPRLSRMIDGSAEITAR
Ga0184635_1003213213300018072Groundwater SedimentEALLARTYGPPGLEKDIAFCAQVDVLDVVPRFERMHGRAAEISS
Ga0184609_1000878253300018076Groundwater SedimentRTYGPPGLEEDIRFCARESVLDVVPRFAGMHEAAAEIRSAS
Ga0190270_1080919623300018469SoilARTYGPPGLEADIEFCSQEDTIDAVPRFSRMVDGAAEIVAS
Ga0193700_102223613300019873SoilPGLEEDIAFCAQVSVLDVVPRLSRMVDGSAEITAR
Ga0193747_114301923300019885SoilTYGPPGLDEDIRFCAQESILDVVPRFSGMVGSAAEITL
Ga0193738_118921813300020020SoilGPPGLEEDIKFCAQENTIDVVPRFSRMADGAAEIVR
Ga0193694_103834313300021415SoilGLNARTYGPPGLEADVEFCAQVDVLHTVPRLARMVGNAAEIVA
Ga0126371_1205199713300021560Tropical Forest SoilDGLNARTYGPPGLEADIAFCAQVDLLDVVPRFSQMVGRAAEITAA
Ga0224452_119728223300022534Groundwater SedimentPPGLEEDIAFCAQVSVLDVVPRLNRMVDGGAEITA
Ga0222623_1007744243300022694Groundwater SedimentARTYGPPGLEDDIAFCAQVSVLDVVPRLSRMVDGSAEITAR
Ga0222623_1026302213300022694Groundwater SedimentARTYGPPGLEEDIAFCARESVLTAVPRFAGMRGAAAEVVL
Ga0247794_1005906233300024055SoilGINARTYGPPGLEEDIAWCSQVSVLDVVPRLSQMRGAVAEVTGG
Ga0247686_105322223300024177SoilTYGPPGLEEDIAFCSQVVVLDVVPRFSRMVGPAAEIVL
Ga0207706_1091352613300025933Corn RhizosphereDAHSGLTARTYGPPGLEEDILFCSRESVLPVVPRLAAVTDGAAEIVA
Ga0207686_1059673623300025934Miscanthus RhizosphereSGLTARTYGPPGLEEDIRFCARESVLDAVPRFAGMHETAAEIRLA
Ga0207709_1116858613300025935Miscanthus RhizosphereDPVDGINARTYGPPGLEDDLAFVARVDVLDVVPRLTGMVAGAAEIRA
Ga0207683_1168953423300026121Miscanthus RhizosphereLEALNARTYGPPGLEEDIAFCARENVLDVVPRLAGMVGTAAEIRI
Ga0209027_107859813300026300Grasslands SoilPNAIDGLNARTYGPPGLEADIEWCARESVLDVVPRLAGVVDAEETAVW
Ga0209238_126708323300026301Grasslands SoilPPGLEADIEFCAQENLLETVPRFTQMIGSAAEIVA
Ga0209328_1018818823300027727Forest SoilPGLEDDLRWCTQENTLDVVPRFSRLVGAAAEIVAEGSPHSAK
Ga0209073_1020624723300027765Agricultural SoilTYGPPGLEGDIAFCAQEDLLDVVPRLTGGVGAAARIEL
Ga0209811_1044126313300027821Surface SoilRTYGPPGLEDDIAYCAQDDLLDVVPELTGAEGAAAEIMLT
Ga0209814_1024394813300027873Populus RhizosphereYGPAGLEEDIAYCAQEDRLDVVPELTGMEGAAAEIMLR
Ga0209481_1005398113300027880Populus RhizosphereTYGPPGLDADIEFCSQENTIDVVPRFSRMVESAAEIVR
Ga0265318_1004404013300028577RhizosphereYGPPGLEADIAFCAQVDLLDVVPRFSRMVGPAAEITA
Ga0247821_1067876723300028596SoilAGLSARTYGPPGLEEDIRFCARESVLEVVPRFVGTEGPAAVVTA
Ga0247820_1091948033300028597SoilAYPDPVDGINARTYGPPGLEEDIAFVARVNVLDVVPRLTGMVAGAAEIRA
Ga0307311_1026558913300028716SoilLLARTYGPPGLEEDIAFCAQVSVLDVVPRLNRMVDGGAEITA
Ga0307311_1027247613300028716SoilGLLARTYGPPGLEDDIAFCAQVSVLDVVPRLSRMVDGSAEITAR
Ga0307298_1000585953300028717SoilGLLARTYGPPGLEDDIAFCAQVSVLDVVPRLSRMVDGSAEIMAR
Ga0307298_1009440413300028717SoilPDPHEGLLARTYGPPGLEEDIAFCAQVSVLDVVPRLNRMVDGGAEITA
Ga0307319_1006493113300028722SoilARTYGPPGLEEDIAFCAQVDLLDVVPRFERMHGRAAEISS
Ga0307319_1021392413300028722SoilEGLNARTYGPAGLEEDIAFCARESVVDAVPRLVGMVGLAAEIALA
Ga0307318_1007946923300028744SoilFPTALDGLNARTYGPPGLEQDIAYCAQEDLLDVVPQLTEATGAAAEIMRR
Ga0307280_1003710313300028768SoilRTYGPPGLQEDIAWCGRESVLEVVPRFVRMAGRAAEVTL
Ga0307280_1019099813300028768SoilIDGINARTYGPPGLEEDIAWCSQVSVLDVVPRFSRMLGSVAEVTR
Ga0307320_1003259113300028771SoilYGPPGLEDDIRFCAQENVVDVVPRLNRMVDSAAEIVVGEVSA
Ga0307320_1010755113300028771SoilLARTYGPPGLEDDIAFCAQVSVLDVVPTLSQMVDGAAEITTG
Ga0307320_1045534113300028771SoilEALNARTYGPPGLEEDILFCSRESVLPVVPRFAGMAGVAAEIVP
Ga0307281_1015317713300028803SoilPSALDGLNARTYGPPGLEEDIAFCARESVLTAVPRFAGMQGAAAEVVV
Ga0307302_1002515453300028814SoilLARTYGPPGLEEDIAFCAQVDLLDVVPRFERMHGRAAEISS
Ga0307302_1006742013300028814SoilGPPGLEEDIAWCSQENLLNVVPRLSRMFGAAAEITL
Ga0307302_1035568513300028814SoilLARTYGPPGLEEDIRFCAQENTIAVVPRFTRMVDSAAEITL
Ga0307302_1041121233300028814SoilPPGLEEDILFCSRESVLPVVPRLAGVEDGAAEIVA
Ga0307302_1046728023300028814SoilPDSHEALLARTYGPPGLEEDIAFCAQVDLLDVVPRFERMHGRAAEITRREGT
Ga0307310_1024570713300028824SoilGLNARTYGPPGLEADIEFCAQVDLLDTVPRFSRMVGNAAEIVA
Ga0307310_1028519913300028824SoilNALDGLNARTYGPPGLEEDIAYCAQEDLLGAVPRLTGTVGAAAEIMLR
Ga0307310_1035174413300028824SoilGPPGLEDDIAFCAQVSVLDVVPRLSRMVDGSAEIMAR
Ga0307310_1058479223300028824SoilLARTYGPPGLEEDIAFCAQVSVLDVVPRLNRMVDGGAEITA
Ga0307312_1041105423300028828SoilLNARTYGPSGLEDDIAYCAQEDLLDVVPRLTGMVGAAAEIMLR
Ga0307300_1000335713300028880SoilEALLARTYGPPGLEEDIRFCAQEDTVDVVPRLNRMVDSAAEIVAG
Ga0247827_1056115623300028889SoilYGPPGLEEDIAFCAREGVLEVVPRLAGMRGPAAEITL
Ga0247827_1057076623300028889SoilTYGPPGLEEDIAWCAQESLLDVVPRFTRMVDAAAEIVA
Ga0247826_1059123013300030336SoilYGPPGLEEDILFCSRESVLPVVPRLAGVTDGAAEIVA
Ga0318502_1010850013300031747SoilRTYGPPGLEADIEYCAQVDLLATVPRFERMVGDAAEIVA
Ga0318492_1015393743300031748SoilLNARTYGPPGLEADIEYCAQVDLLATVPRFERMVGDAAEIVA
Ga0318548_1011064713300031793SoilLARTYGPPGLEADIAYCAQVDLLDTVPRFARMVGPAAEIVA
Ga0318548_1041171813300031793SoilLAGLNARAYGPPGLEADIEYCAQVDLLATVPRFERMVGDAAEIVA
Ga0318568_1029608113300031819SoilAFEARTYGPPGLEADIAYCARENLLETVPRFARMHGPAAEITVLSG
Ga0318568_1047398033300031819SoilTYGPPGLEADIAYCAQVDLLDTVPRFARMVGPAAEIVA
Ga0307473_1080668123300031820Hardwood Forest SoilTYGPPGLEEDIAFCAREDVLDVVPRLSGKIGAAAEITAVRAADRSPPP
Ga0307473_1120484013300031820Hardwood Forest SoilLEARTYGPPGLEEDIAYCAQEDRLDVVPVLTGVEGAAAEIMLR
Ga0318520_1005174213300031897SoilPGLEADIEFCAQIDLLDVGPRYARMVGPAAEIVKGASE
Ga0307406_1076296123300031901RhizosphereNARTYGPPGLEEDVAWCSQVGVLDVVPRFSGMVGPAAEIVRAA
Ga0307407_1113699113300031903RhizospherePLAGLNARTYGPPGLEADIEFCARVDALEVVPRFSRLVGTAAEIVAAAL
Ga0308175_10004469763300031938SoilNAIDGINARTYGPPGLEEDIAFCAQESVLEVVPRFSRMIGPAAEVVA
Ga0308175_10082532313300031938SoilTVRAFPHALDAFNARTYGPPGLEEDIAYCAQEDLLDVVPRLTTTVGTAAEIEV
Ga0307416_10073977413300032002RhizospherePGLEADIEFCARVDALEVVPRFSRLVGTAAEIVAAAL
Ga0307416_10323545713300032002RhizosphereGPPGLEEDIAFCAQVGILDVVPRLSRMVDGAAEVSS
Ga0318569_1041496723300032010SoilLEAFEARTYGPPGLEADIAYCARENLLETVPRFARMHGPAAEITVLSG
Ga0318505_1047626423300032060SoilRTYGPPGLEADLAFCAQVDLLDVVPRFSQMVGPAAEITAA
Ga0318510_1029143123300032064SoilTYGPPGLEADIAWCTQENLLVTVPRFVRMDGPAAEIRA
Ga0318553_1043576323300032068SoilAFVRVGPPGLEADIAYCAQVDLLDTVPRFARMVGPAAEIVA
Ga0318525_1027551333300032089SoilYGPPGLEADIAYCAQVDLLDTVPRFARMVGPAAEIVA
Ga0335082_1073447423300032782SoilLNARTYGPPGLEEDILFCSRESVVAVVPRLSRMVDVAAELVG
Ga0335080_1061815233300032828SoilDPVDGINARTYGPPGLEDDIAWVAQVDLLDVVPRFARMVGAAAEVAL
Ga0335070_1022209913300032829SoilDPLAGLNARTYGPPGLEADIEFCAQVDLLDAVPRFARMVGSAAEIVA
Ga0335083_1031065913300032954SoilGLNARTYGPPGLEADIEHCAQVDLLATVPRFARMVRRAAEIVA
Ga0247829_1173230523300033550SoilGPPGLEEDILFCSRESVLPVVPRLAGVTDGAAEIVA
Ga0247830_1159539023300033551SoilTYGPPGLEEDLAFCARESVLETVPRFAGMRGPAAEITL
Ga0364943_0306181_3_1313300034354SedimentLNARTYGPPGLEEDIAFCARESVLEAVPRFAGMQGDAAEIVL


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.