NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F021344

Metagenome / Metatranscriptome Family F021344

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F021344
Family Type Metagenome / Metatranscriptome
Number of Sequences 219
Average Sequence Length 50 residues
Representative Sequence MVKRRKDRLEKGTEARRRARKSGLAPAGTRVIPDKRRKPAKHKPDLLREVD
Number of Associated Samples 148
Number of Associated Scaffolds 219

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 75.00 %
% of genes near scaffold ends (potentially truncated) 26.48 %
% of genes from short scaffolds (< 2000 bps) 72.15 %
Associated GOLD sequencing projects 134
AlphaFold2 3D model prediction Yes
3D model pTM-score0.27

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (79.909 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(20.091 % of family members)
Environment Ontology (ENVO) Unclassified
(37.900 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(65.297 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 24.05%    β-sheet: 0.00%    Coil/Unstructured: 75.95%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.27
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 219 Family Scaffolds
PF00578AhpC-TSA 37.44
PF13519VWA_2 5.48
PF13450NAD_binding_8 5.02
PF07228SpoIIE 2.74
PF01738DLH 1.37
PF02190LON_substr_bdg 1.37
PF13620CarboxypepD_reg 0.91
PF02581TMP-TENI 0.46
PF030614HBT 0.46
PF16401DUF5009 0.46
PF01584CheW 0.46
PF13231PMT_2 0.46
PF01268FTHFS 0.46
PF08245Mur_ligase_M 0.46
PF07731Cu-oxidase_2 0.46
PF13478XdhC_C 0.46
PF14579HHH_6 0.46
PF00266Aminotran_5 0.46
PF14559TPR_19 0.46
PF07238PilZ 0.46
PF01593Amino_oxidase 0.46
PF03705CheR_N 0.46
PF01321Creatinase_N 0.46
PF00873ACR_tran 0.46
PF00072Response_reg 0.46

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 219 Family Scaffolds
COG1352Methylase of chemotaxis methyl-accepting proteinsSignal transduction mechanisms [T] 0.91
COG0006Xaa-Pro aminopeptidaseAmino acid transport and metabolism [E] 0.46
COG0352Thiamine monophosphate synthaseCoenzyme transport and metabolism [H] 0.46
COG2132Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)Cell cycle control, cell division, chromosome partitioning [D] 0.46
COG2759Formyltetrahydrofolate synthetaseNucleotide transport and metabolism [F] 0.46


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms79.91 %
UnclassifiedrootN/A20.09 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000567|JGI12270J11330_10002334All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia13912Open in IMG/M
3300000567|JGI12270J11330_10099270All Organisms → cellular organisms → Bacteria → Acidobacteria1278Open in IMG/M
3300001159|JGI12650J13346_1001610All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter975Open in IMG/M
3300001545|JGI12630J15595_10127301Not Available504Open in IMG/M
3300002245|JGIcombinedJ26739_100047565All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia3893Open in IMG/M
3300004080|Ga0062385_11123243All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Woeseiaceae → unclassified Woeseiaceae → Woeseiaceae bacterium534Open in IMG/M
3300004082|Ga0062384_100741113Not Available681Open in IMG/M
3300004091|Ga0062387_100656848All Organisms → cellular organisms → Bacteria → Acidobacteria761Open in IMG/M
3300004091|Ga0062387_101323522All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Woeseiaceae → unclassified Woeseiaceae → Woeseiaceae bacterium570Open in IMG/M
3300004092|Ga0062389_101050182All Organisms → cellular organisms → Bacteria1000Open in IMG/M
3300004104|Ga0058891_1397579Not Available678Open in IMG/M
3300004152|Ga0062386_100566628Not Available926Open in IMG/M
3300005332|Ga0066388_100650360All Organisms → cellular organisms → Bacteria1669Open in IMG/M
3300005332|Ga0066388_100711580All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis1610Open in IMG/M
3300005332|Ga0066388_101740046All Organisms → cellular organisms → Bacteria1105Open in IMG/M
3300005332|Ga0066388_102128629Not Available1010Open in IMG/M
3300005332|Ga0066388_105361950All Organisms → cellular organisms → Bacteria → Acidobacteria650Open in IMG/M
3300005434|Ga0070709_11691354All Organisms → cellular organisms → Bacteria → Acidobacteria516Open in IMG/M
3300005531|Ga0070738_10000023All Organisms → cellular organisms → Bacteria461619Open in IMG/M
3300005537|Ga0070730_10607283All Organisms → cellular organisms → Bacteria697Open in IMG/M
3300005541|Ga0070733_10075513Not Available2128Open in IMG/M
3300005552|Ga0066701_10470316Not Available780Open in IMG/M
3300005602|Ga0070762_10202256All Organisms → cellular organisms → Bacteria → Acidobacteria1216Open in IMG/M
3300005610|Ga0070763_10761783All Organisms → cellular organisms → Bacteria570Open in IMG/M
3300005764|Ga0066903_100568205All Organisms → cellular organisms → Bacteria1952Open in IMG/M
3300005764|Ga0066903_102880728Not Available933Open in IMG/M
3300005921|Ga0070766_10373854All Organisms → cellular organisms → Bacteria929Open in IMG/M
3300005944|Ga0066788_10105771All Organisms → cellular organisms → Bacteria699Open in IMG/M
3300006059|Ga0075017_100733630All Organisms → cellular organisms → Bacteria → Acidobacteria761Open in IMG/M
3300006102|Ga0075015_100607243Not Available641Open in IMG/M
3300006162|Ga0075030_100908589All Organisms → cellular organisms → Bacteria694Open in IMG/M
3300006176|Ga0070765_101108357All Organisms → cellular organisms → Bacteria → Acidobacteria748Open in IMG/M
3300006642|Ga0075521_10215698All Organisms → cellular organisms → Bacteria → Proteobacteria913Open in IMG/M
3300007076|Ga0075435_100968271All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria743Open in IMG/M
3300007258|Ga0099793_10009413All Organisms → cellular organisms → Bacteria3732Open in IMG/M
3300007265|Ga0099794_10286706All Organisms → cellular organisms → Bacteria → Acidobacteria852Open in IMG/M
3300009088|Ga0099830_11330945Not Available597Open in IMG/M
3300009524|Ga0116225_1008690All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae5668Open in IMG/M
3300009631|Ga0116115_1000716All Organisms → cellular organisms → Bacteria16649Open in IMG/M
3300009792|Ga0126374_10990210All Organisms → cellular organisms → Bacteria659Open in IMG/M
3300010046|Ga0126384_10616466All Organisms → cellular organisms → Bacteria952Open in IMG/M
3300010046|Ga0126384_11037735All Organisms → cellular organisms → Bacteria → Acidobacteria748Open in IMG/M
3300010046|Ga0126384_11275866Not Available680Open in IMG/M
3300010047|Ga0126382_11097096Not Available705Open in IMG/M
3300010048|Ga0126373_10378726Not Available1435Open in IMG/M
3300010048|Ga0126373_10552735All Organisms → cellular organisms → Bacteria → Acidobacteria1199Open in IMG/M
3300010048|Ga0126373_12208666All Organisms → cellular organisms → Bacteria → Acidobacteria611Open in IMG/M
3300010048|Ga0126373_12637827All Organisms → cellular organisms → Bacteria → Acidobacteria560Open in IMG/M
3300010341|Ga0074045_10012569All Organisms → cellular organisms → Bacteria → Acidobacteria6938Open in IMG/M
3300010343|Ga0074044_10010074All Organisms → cellular organisms → Bacteria7247Open in IMG/M
3300010358|Ga0126370_10218138All Organisms → cellular organisms → Bacteria → Acidobacteria1455Open in IMG/M
3300010360|Ga0126372_10227012All Organisms → cellular organisms → Bacteria → Acidobacteria1580Open in IMG/M
3300010360|Ga0126372_12602018All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria557Open in IMG/M
3300010361|Ga0126378_10755714All Organisms → cellular organisms → Bacteria1083Open in IMG/M
3300010361|Ga0126378_11970014Not Available665Open in IMG/M
3300010366|Ga0126379_10222928All Organisms → cellular organisms → Bacteria1833Open in IMG/M
3300010376|Ga0126381_101047008All Organisms → cellular organisms → Bacteria1178Open in IMG/M
3300010379|Ga0136449_101016926All Organisms → cellular organisms → Bacteria1332Open in IMG/M
3300011120|Ga0150983_16271886All Organisms → cellular organisms → Bacteria → Acidobacteria762Open in IMG/M
3300012096|Ga0137389_11685070All Organisms → cellular organisms → Bacteria → Acidobacteria530Open in IMG/M
3300012202|Ga0137363_10377716All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1177Open in IMG/M
3300012202|Ga0137363_11023095All Organisms → cellular organisms → Bacteria → Acidobacteria702Open in IMG/M
3300012202|Ga0137363_11659499All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria531Open in IMG/M
3300012203|Ga0137399_11047552All Organisms → cellular organisms → Bacteria → Acidobacteria687Open in IMG/M
3300012361|Ga0137360_10275392All Organisms → cellular organisms → Bacteria1390Open in IMG/M
3300012362|Ga0137361_10278531All Organisms → cellular organisms → Bacteria → Acidobacteria1528Open in IMG/M
3300012363|Ga0137390_10163065All Organisms → cellular organisms → Bacteria2216Open in IMG/M
3300012683|Ga0137398_10021974All Organisms → cellular organisms → Bacteria → Acidobacteria3481Open in IMG/M
3300012922|Ga0137394_10124466All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia2183Open in IMG/M
3300012924|Ga0137413_10440474Not Available946Open in IMG/M
3300012929|Ga0137404_10035362All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis3732Open in IMG/M
3300012971|Ga0126369_10092887All Organisms → cellular organisms → Bacteria → Acidobacteria2710Open in IMG/M
3300014168|Ga0181534_10771701All Organisms → cellular organisms → Bacteria566Open in IMG/M
3300015264|Ga0137403_10085621All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis3179Open in IMG/M
3300016319|Ga0182033_10006039All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium6512Open in IMG/M
3300016319|Ga0182033_10106609All Organisms → cellular organisms → Bacteria → Acidobacteria2074Open in IMG/M
3300016341|Ga0182035_10284390All Organisms → cellular organisms → Bacteria1350Open in IMG/M
3300016371|Ga0182034_10004129All Organisms → cellular organisms → Bacteria7565Open in IMG/M
3300016371|Ga0182034_11793071All Organisms → cellular organisms → Bacteria → Acidobacteria541Open in IMG/M
3300016404|Ga0182037_10725747Not Available852Open in IMG/M
3300016422|Ga0182039_12002627All Organisms → cellular organisms → Bacteria533Open in IMG/M
3300017822|Ga0187802_10013936Not Available2660Open in IMG/M
3300017822|Ga0187802_10014592All Organisms → cellular organisms → Bacteria2611Open in IMG/M
3300017823|Ga0187818_10083082All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1382Open in IMG/M
3300017933|Ga0187801_10157311All Organisms → cellular organisms → Bacteria887Open in IMG/M
3300017933|Ga0187801_10519520All Organisms → cellular organisms → Bacteria502Open in IMG/M
3300017934|Ga0187803_10000033All Organisms → cellular organisms → Bacteria59240Open in IMG/M
3300017934|Ga0187803_10043769All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1772Open in IMG/M
3300017934|Ga0187803_10419146All Organisms → cellular organisms → Bacteria544Open in IMG/M
3300017937|Ga0187809_10085571All Organisms → cellular organisms → Bacteria → Acidobacteria1044Open in IMG/M
3300017939|Ga0187775_10377911Not Available580Open in IMG/M
3300017955|Ga0187817_10210371All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1240Open in IMG/M
3300017959|Ga0187779_10004433All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis8359Open in IMG/M
3300017961|Ga0187778_10166582All Organisms → cellular organisms → Bacteria1395Open in IMG/M
3300017961|Ga0187778_10229684All Organisms → cellular organisms → Bacteria1188Open in IMG/M
3300017966|Ga0187776_10143411All Organisms → cellular organisms → Bacteria → Acidobacteria1462Open in IMG/M
3300017975|Ga0187782_10001402All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae17453Open in IMG/M
3300018085|Ga0187772_10003558All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae7889Open in IMG/M
3300018085|Ga0187772_11437611Not Available512Open in IMG/M
3300018088|Ga0187771_10115410All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2179Open in IMG/M
3300018088|Ga0187771_10387389All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii1178Open in IMG/M
3300018090|Ga0187770_10238278All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1408Open in IMG/M
3300018090|Ga0187770_10793333All Organisms → cellular organisms → Bacteria → Acidobacteria758Open in IMG/M
3300020140|Ga0179590_1075128All Organisms → cellular organisms → Bacteria → Acidobacteria894Open in IMG/M
3300020579|Ga0210407_10000030All Organisms → cellular organisms → Bacteria209274Open in IMG/M
3300020579|Ga0210407_10033893All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis3798Open in IMG/M
3300020579|Ga0210407_10133818All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1903Open in IMG/M
3300020579|Ga0210407_11239487All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria560Open in IMG/M
3300020580|Ga0210403_10004820All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis11562Open in IMG/M
3300020580|Ga0210403_10449706All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1049Open in IMG/M
3300020580|Ga0210403_10719248All Organisms → cellular organisms → Bacteria → Acidobacteria799Open in IMG/M
3300020580|Ga0210403_11236558Not Available573Open in IMG/M
3300020581|Ga0210399_10012933All Organisms → cellular organisms → Bacteria → Acidobacteria6555Open in IMG/M
3300020581|Ga0210399_10084471All Organisms → cellular organisms → Bacteria → Acidobacteria2582Open in IMG/M
3300020581|Ga0210399_10727259All Organisms → cellular organisms → Bacteria → Acidobacteria814Open in IMG/M
3300020581|Ga0210399_10770011All Organisms → cellular organisms → Bacteria → Acidobacteria788Open in IMG/M
3300020581|Ga0210399_11550244Not Available512Open in IMG/M
3300020582|Ga0210395_10217349All Organisms → cellular organisms → Bacteria → Acidobacteria1434Open in IMG/M
3300020583|Ga0210401_10086115All Organisms → cellular organisms → Bacteria → Acidobacteria2956Open in IMG/M
3300020583|Ga0210401_10678997All Organisms → cellular organisms → Bacteria → Acidobacteria891Open in IMG/M
3300020583|Ga0210401_11619893Not Available505Open in IMG/M
3300021168|Ga0210406_10264254All Organisms → cellular organisms → Bacteria1408Open in IMG/M
3300021168|Ga0210406_10352675All Organisms → cellular organisms → Bacteria1186Open in IMG/M
3300021170|Ga0210400_10000012All Organisms → cellular organisms → Bacteria → Acidobacteria374320Open in IMG/M
3300021171|Ga0210405_10000379All Organisms → cellular organisms → Bacteria61262Open in IMG/M
3300021171|Ga0210405_10653104Not Available816Open in IMG/M
3300021406|Ga0210386_10219133All Organisms → cellular organisms → Bacteria1617Open in IMG/M
3300021420|Ga0210394_10000009All Organisms → cellular organisms → Bacteria492652Open in IMG/M
3300021420|Ga0210394_10000133All Organisms → cellular organisms → Bacteria179923Open in IMG/M
3300021420|Ga0210394_10234718All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1604Open in IMG/M
3300021420|Ga0210394_10903970All Organisms → cellular organisms → Bacteria → Acidobacteria768Open in IMG/M
3300021420|Ga0210394_11318655All Organisms → cellular organisms → Bacteria → Acidobacteria616Open in IMG/M
3300021432|Ga0210384_10008744All Organisms → cellular organisms → Bacteria → Acidobacteria10531Open in IMG/M
3300021432|Ga0210384_10903235Not Available783Open in IMG/M
3300021432|Ga0210384_11716230All Organisms → cellular organisms → Bacteria → Acidobacteria533Open in IMG/M
3300021433|Ga0210391_10413848All Organisms → cellular organisms → Bacteria1058Open in IMG/M
3300021478|Ga0210402_10979568Not Available772Open in IMG/M
3300021478|Ga0210402_11010612All Organisms → cellular organisms → Bacteria → Acidobacteria758Open in IMG/M
3300021559|Ga0210409_10086589All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2896Open in IMG/M
3300021559|Ga0210409_11544128Not Available540Open in IMG/M
3300021560|Ga0126371_10011735All Organisms → cellular organisms → Bacteria → Acidobacteria7927Open in IMG/M
3300021560|Ga0126371_10057342All Organisms → cellular organisms → Bacteria3744Open in IMG/M
3300021560|Ga0126371_12942349Not Available577Open in IMG/M
3300022533|Ga0242662_10032228All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1269Open in IMG/M
3300025439|Ga0208323_1056988All Organisms → cellular organisms → Bacteria → Acidobacteria691Open in IMG/M
3300025480|Ga0208688_1009847All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia2802Open in IMG/M
3300025878|Ga0209584_10183001All Organisms → cellular organisms → Bacteria → Acidobacteria796Open in IMG/M
3300026490|Ga0257153_1006870All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis2238Open in IMG/M
3300026890|Ga0207781_1031524All Organisms → cellular organisms → Bacteria → Acidobacteria511Open in IMG/M
3300026945|Ga0207743_1021299All Organisms → cellular organisms → Bacteria → Acidobacteria663Open in IMG/M
3300026953|Ga0207835_1039710All Organisms → cellular organisms → Bacteria → Acidobacteria594Open in IMG/M
3300026979|Ga0207817_1002164All Organisms → cellular organisms → Bacteria → Acidobacteria2427Open in IMG/M
3300027376|Ga0209004_1024712Not Available967Open in IMG/M
3300027625|Ga0208044_1180439All Organisms → cellular organisms → Bacteria → Acidobacteria572Open in IMG/M
3300027706|Ga0209581_1000042All Organisms → cellular organisms → Bacteria498220Open in IMG/M
3300027783|Ga0209448_10244118All Organisms → cellular organisms → Bacteria593Open in IMG/M
3300027812|Ga0209656_10097475All Organisms → cellular organisms → Bacteria → Acidobacteria1550Open in IMG/M
3300027854|Ga0209517_10000009All Organisms → cellular organisms → Bacteria348492Open in IMG/M
3300027867|Ga0209167_10217171All Organisms → cellular organisms → Bacteria1021Open in IMG/M
3300027884|Ga0209275_10013187All Organisms → cellular organisms → Bacteria → Acidobacteria3571Open in IMG/M
3300027889|Ga0209380_10592686Not Available642Open in IMG/M
3300027911|Ga0209698_10010265All Organisms → cellular organisms → Bacteria9475Open in IMG/M
3300028047|Ga0209526_10046106All Organisms → cellular organisms → Bacteria → Acidobacteria3067Open in IMG/M
3300029636|Ga0222749_10223293All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis950Open in IMG/M
3300030730|Ga0307482_1229821All Organisms → cellular organisms → Bacteria575Open in IMG/M
(restricted) 3300031150|Ga0255311_1032988All Organisms → cellular organisms → Bacteria1080Open in IMG/M
3300031469|Ga0170819_12301392All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1150Open in IMG/M
3300031474|Ga0170818_102695847All Organisms → cellular organisms → Bacteria857Open in IMG/M
3300031474|Ga0170818_109940378All Organisms → cellular organisms → Bacteria → Acidobacteria562Open in IMG/M
3300031545|Ga0318541_10190010All Organisms → cellular organisms → Bacteria1135Open in IMG/M
3300031545|Ga0318541_10334098All Organisms → cellular organisms → Bacteria → Acidobacteria846Open in IMG/M
3300031718|Ga0307474_11359749Not Available560Open in IMG/M
3300031719|Ga0306917_10151011All Organisms → cellular organisms → Bacteria1723Open in IMG/M
3300031720|Ga0307469_10254034All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1417Open in IMG/M
3300031720|Ga0307469_11379641All Organisms → cellular organisms → Bacteria → Acidobacteria671Open in IMG/M
3300031754|Ga0307475_10788168All Organisms → cellular organisms → Bacteria → Acidobacteria755Open in IMG/M
3300031879|Ga0306919_10198184All Organisms → cellular organisms → Bacteria1491Open in IMG/M
3300031879|Ga0306919_10277506All Organisms → cellular organisms → Bacteria → Acidobacteria1267Open in IMG/M
3300031879|Ga0306919_10974063All Organisms → cellular organisms → Bacteria → Acidobacteria649Open in IMG/M
3300031890|Ga0306925_11983956Not Available550Open in IMG/M
3300031910|Ga0306923_10000912All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae24875Open in IMG/M
3300031912|Ga0306921_10002502All Organisms → cellular organisms → Bacteria18438Open in IMG/M
3300031912|Ga0306921_10108075All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis3230Open in IMG/M
3300031945|Ga0310913_10281090All Organisms → cellular organisms → Bacteria1172Open in IMG/M
3300031946|Ga0310910_10012541All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis5344Open in IMG/M
3300031946|Ga0310910_11160345Not Available600Open in IMG/M
3300031954|Ga0306926_11369015All Organisms → cellular organisms → Bacteria → Acidobacteria823Open in IMG/M
3300031954|Ga0306926_12933710Not Available511Open in IMG/M
3300032160|Ga0311301_12554905All Organisms → cellular organisms → Bacteria569Open in IMG/M
3300032174|Ga0307470_10325606All Organisms → cellular organisms → Bacteria → Acidobacteria1054Open in IMG/M
3300032174|Ga0307470_11353312Not Available585Open in IMG/M
3300032180|Ga0307471_100038126All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis3812Open in IMG/M
3300032180|Ga0307471_101459417All Organisms → cellular organisms → Bacteria → Acidobacteria843Open in IMG/M
3300032180|Ga0307471_103167119Not Available583Open in IMG/M
3300032205|Ga0307472_100142440All Organisms → cellular organisms → Bacteria1736Open in IMG/M
3300032205|Ga0307472_100807109Not Available858Open in IMG/M
3300032261|Ga0306920_101059565All Organisms → cellular organisms → Bacteria1178Open in IMG/M
3300032261|Ga0306920_101984156All Organisms → cellular organisms → Bacteria816Open in IMG/M
3300032770|Ga0335085_10002394All Organisms → cellular organisms → Bacteria35208Open in IMG/M
3300032770|Ga0335085_10011039All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae13428Open in IMG/M
3300032770|Ga0335085_10495571All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Nitrospirillum → Nitrospirillum iridis1395Open in IMG/M
3300032782|Ga0335082_10815249Not Available795Open in IMG/M
3300032828|Ga0335080_11014317All Organisms → cellular organisms → Bacteria → Acidobacteria844Open in IMG/M
3300032828|Ga0335080_12217630Not Available527Open in IMG/M
3300032829|Ga0335070_10020525All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis7634Open in IMG/M
3300032829|Ga0335070_11657445All Organisms → cellular organisms → Bacteria → Acidobacteria581Open in IMG/M
3300032893|Ga0335069_10050222All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis5485Open in IMG/M
3300032893|Ga0335069_11568681Not Available706Open in IMG/M
3300032898|Ga0335072_10033549All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis7107Open in IMG/M
3300033158|Ga0335077_10086784All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia3701Open in IMG/M
3300033402|Ga0326728_10294028All Organisms → cellular organisms → Bacteria → Acidobacteria1490Open in IMG/M
3300033402|Ga0326728_11044300Not Available560Open in IMG/M
3300033804|Ga0314863_110047Not Available582Open in IMG/M
3300033808|Ga0314867_122132All Organisms → cellular organisms → Bacteria → Acidobacteria608Open in IMG/M
3300033983|Ga0371488_0115987All Organisms → cellular organisms → Bacteria → Acidobacteria1456Open in IMG/M
3300034091|Ga0326724_0390094All Organisms → cellular organisms → Bacteria → Acidobacteria742Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil20.09%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil9.13%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil9.59%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil7.76%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil5.48%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil5.48%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland5.48%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil5.02%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment4.57%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil4.11%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil3.20%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil3.20%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil2.74%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil2.28%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds1.83%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil1.83%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland1.37%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil1.37%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil0.91%
PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland0.91%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil0.91%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog0.46%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.46%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil0.46%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.46%
Sandy SoilEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil0.46%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.46%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000567Peat soil microbial communities from Weissenstadt, Germany - SII-2010EnvironmentalOpen in IMG/M
3300001159Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M2EnvironmentalOpen in IMG/M
3300001545Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1EnvironmentalOpen in IMG/M
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300004080Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3EnvironmentalOpen in IMG/M
3300004082Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3EnvironmentalOpen in IMG/M
3300004091Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004104Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF218 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004152Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005531Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen12_06102014_R2EnvironmentalOpen in IMG/M
3300005537Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1EnvironmentalOpen in IMG/M
3300005541Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1EnvironmentalOpen in IMG/M
3300005552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150EnvironmentalOpen in IMG/M
3300005602Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2EnvironmentalOpen in IMG/M
3300005610Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005921Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6EnvironmentalOpen in IMG/M
3300005944Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048EnvironmentalOpen in IMG/M
3300006059Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012EnvironmentalOpen in IMG/M
3300006102Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013EnvironmentalOpen in IMG/M
3300006162Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012EnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006642Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-DEnvironmentalOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009524Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaGEnvironmentalOpen in IMG/M
3300009631Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_100EnvironmentalOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010341Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2EnvironmentalOpen in IMG/M
3300010343Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300014168Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaGEnvironmentalOpen in IMG/M
3300015264Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300016341Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170EnvironmentalOpen in IMG/M
3300016371Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172EnvironmentalOpen in IMG/M
3300016404Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082EnvironmentalOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300017822Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2EnvironmentalOpen in IMG/M
3300017823Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3EnvironmentalOpen in IMG/M
3300017933Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1EnvironmentalOpen in IMG/M
3300017934Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3EnvironmentalOpen in IMG/M
3300017937Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4EnvironmentalOpen in IMG/M
3300017939Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MGEnvironmentalOpen in IMG/M
3300017955Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2EnvironmentalOpen in IMG/M
3300017959Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MGEnvironmentalOpen in IMG/M
3300017961Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MGEnvironmentalOpen in IMG/M
3300017966Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MGEnvironmentalOpen in IMG/M
3300017975Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018085Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018088Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MGEnvironmentalOpen in IMG/M
3300018090Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300020140Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300020582Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-OEnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021406Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-OEnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021433Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-OEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300022533Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300025439Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_100 (SPAdes)EnvironmentalOpen in IMG/M
3300025480Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150 (SPAdes)EnvironmentalOpen in IMG/M
3300025878Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D (SPAdes)EnvironmentalOpen in IMG/M
3300026490Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-AEnvironmentalOpen in IMG/M
3300026890Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 51 (SPAdes)EnvironmentalOpen in IMG/M
3300026945Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 55 (SPAdes)EnvironmentalOpen in IMG/M
3300026953Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 8 (SPAdes)EnvironmentalOpen in IMG/M
3300026979Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 13 (SPAdes)EnvironmentalOpen in IMG/M
3300027376Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027625Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027706Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2 (SPAdes)EnvironmentalOpen in IMG/M
3300027783Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)EnvironmentalOpen in IMG/M
3300027812Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)EnvironmentalOpen in IMG/M
3300027854Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)EnvironmentalOpen in IMG/M
3300027867Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027884Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)EnvironmentalOpen in IMG/M
3300027889Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)EnvironmentalOpen in IMG/M
3300027911Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300028047Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300029636Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030730Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031150 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4EnvironmentalOpen in IMG/M
3300031469Fir Spring Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031474Fir Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031545Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26EnvironmentalOpen in IMG/M
3300031718Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05EnvironmentalOpen in IMG/M
3300031719Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031879Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031945Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082EnvironmentalOpen in IMG/M
3300031946Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172EnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300032782Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1EnvironmentalOpen in IMG/M
3300032828Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4EnvironmentalOpen in IMG/M
3300032829Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3EnvironmentalOpen in IMG/M
3300032893Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1EnvironmentalOpen in IMG/M
3300032898Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1EnvironmentalOpen in IMG/M
3300033158Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1EnvironmentalOpen in IMG/M
3300033402Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MNEnvironmentalOpen in IMG/M
3300033804Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_0_20EnvironmentalOpen in IMG/M
3300033808Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_100_20EnvironmentalOpen in IMG/M
3300033983Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB23AN SIP fractionEnvironmentalOpen in IMG/M
3300034091Peat soil microbial communities from McLean, Ithaca, NY, United States - MB00NEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
JGI12270J11330_10002334123300000567Peatlands SoilMRRKRKQKLDKGVEARRRARNSGLSPGVTRVVADKRKKPPKHKEGLLREEV*
JGI12270J11330_1009927023300000567Peatlands SoilLEILSAPGLAMKRKRKQVLDKGVEARRLARKSGLAPAVTRVIADKRKKPPKHKKAILQEEA*
JGI12650J13346_100161023300001159Forest SoilMVKRRKNRLEKGTEARRRARKSGLAPAGTRVIPDKRRKPEKHKPDLLREVE*
JGI12630J15595_1012730123300001545Forest SoilMKRGRKKKLDKGVEARRLARKVAGVPANTKVIPDKRKRPEKHKPDLLGEQ*
JGIcombinedJ26739_10004756543300002245Forest SoilMVKRKRARLEKGTEARRRARKSGLAPAGTRVIPDKRKKAEKHKPDLIQEVD*
Ga0062385_1020892623300004080Bog Forest SoilMSRPRKKKALDKGREARRVARKSGLKAGATKIVPDKRKMPPKHKADLVPAADE*
Ga0062385_1112324313300004080Bog Forest SoilMKRGRKKKLDKGTEARRLARKVAGVPANTRVIPDKRKRPEKHKPDLLREEA*
Ga0062384_10074111323300004082Bog Forest SoilMKRGRKKKLDKGTEARRLARKVAGVPANTRVIPDKRKRPEKHRPDLLREEV*
Ga0062387_10065684813300004091Bog Forest SoilMKRGRKKKLDKGTEARRLARKVAGVPANTRVIPDKRKRPEKHKPDLLREES*
Ga0062387_10132352223300004091Bog Forest SoilMKRGRRKKLDKGTEARRLARKVAGVPANTRVIPDKRKRPEKHKPDLLREEV*
Ga0062389_10105018213300004092Bog Forest SoilMKRGRKKKLDKGTEARRLARKVAGVPANTRVIPDKRKRPEKHKPDL
Ga0058891_139757913300004104Forest SoilMVKRKKDRLEKGTEARRRARKSGLTPAGTRVIPDKRRKPAKHKPDLLREVD*
Ga0062386_10056662823300004152Bog Forest SoilLDKGVEARRRARKSGLVAATTRVVPDKRKKPERHKPDLLREEA
Ga0066388_10065036023300005332Tropical Forest SoilMAKRRKKRLDKGTEARRRARRSGIAPSGTRVIPDKRKKPERHKPDLLQELGE*
Ga0066388_10071158013300005332Tropical Forest SoilMRLEKGTEARRRARRSGLAPSTTRIIPDKRKKPEKHKPNLLRELE*
Ga0066388_10174004623300005332Tropical Forest SoilMKRRKPRLEKGTEARRRARRSGLAPGATRIIEDKRQKPDKHKKNLLLQADES*
Ga0066388_10212862923300005332Tropical Forest SoilMAKRGKKRLDKGTEARRRARRSGLAPANTRVIPDKRKKPEKHKPDLLREID*
Ga0066388_10536195013300005332Tropical Forest SoilMARGKKERMDKGVEARRRARRSGLAPSGTRVIPDKRKKPEKHKKDLLQESDPDRTW*
Ga0070709_1169135423300005434Corn, Switchgrass And Miscanthus RhizosphereMSRARKKKLDKGVEARRRARKVGLIPATTRVVLDKRKKPEKHKRDLLHEDV*
Ga0070738_10000023613300005531Surface SoilMAKRRKKQLDKGLEARRRARRAGLAPGGTRVIPDKRKKPEKHKADLLAEVD*
Ga0070730_1060728323300005537Surface SoilMVKRKKDRLEKGTEARRRARKSGLTPAGTRVIPDKRRKPEKHKPDLLHEVD*
Ga0070733_1007551323300005541Surface SoilMKRGRKKKLDKGTEARRLARKVAGVPANTRVVPDKRKQPEKHKPDLLTEEL*
Ga0066701_1047031623300005552SoilMRKRKKLDAATEARRRARKAGPAPSGTQVIPDKRKKPEKHKRDWAAAVD*
Ga0070762_1020225633300005602SoilMVKRRKDRLEKGTEARRRARKSGLAPAGTRVIPDKRRKPAKHKPDLLREVD*
Ga0070763_1076178323300005610SoilMSRARKRKLDKGVEARRRARKAGLVPATTRVVPDKRKKAEKHKRDLLLEDV*
Ga0066903_10056820523300005764Tropical Forest SoilMARGKKERMDKGVEARRRARRSGLVPSGTRVIPDKRKKPEKHKKDLLQESDPDRT*
Ga0066903_10288072823300005764Tropical Forest SoilMKRRKPRLEKGTEARRRARRSGLAPGTTRIIEDKRQKPDKHK
Ga0070766_1037385413300005921SoilMRRGRKKKLDKGTEARRLARKVAGVPANTRVIPDKRKRPEKHKPDLLREEL*
Ga0066788_1010577113300005944SoilMARSRKKKTMEKGTEARRRARNAGIAPTTTRVIPDKRMKPAKHKSKGYTELD*
Ga0075017_10073363023300006059WatershedsVVKRKKNRLEKGTEARRRARKSGLAPAGTRVIPDKRTKPQKHKPDLLQELD*
Ga0075015_10060724323300006102WatershedsMSRAKKRKLDKGVEARRRARKTGLVPATTRVVPDKRRKPEKHRRDLLLEDV*
Ga0075030_10090858923300006162WatershedsMKKRKKKGLDKGVEARRRARRSGLAPAGTRVIPDKRKKPVKHRADLLNEFKLDGI*
Ga0070765_10110835713300006176SoilKDRLEKGTEARRRARKSGLAPAGTRVIPDKRKKPEKHKPDLLQELD*
Ga0075521_1021569823300006642Arctic Peat SoilMAKSRKKQLDKGTEARRLARKIGVPPSTTRVIPDKRKKPAKHKGKDLIVEE*
Ga0075435_10096827123300007076Populus RhizosphereMSRARKKKLDKGVEARRRARKVGLIPATTRVVPDKRKKPEKHKRDLLHEDL*
Ga0099793_1000941333300007258Vadose Zone SoilMVKRKKDRLEKGTEARRRARKSGLAPAGTRVIPDKRRKPEKHKPDLIQELD*
Ga0099794_1028670613300007265Vadose Zone SoilMVKRKKDRLEKGTEARRRARKSGLAPAGTRVIPDKRRKPQKHKPDLNEELD*
Ga0099830_1133094523300009088Vadose Zone SoilMVKRKKDRLEKGTEARRRARKSGLAPAGTRVIPDKRRKPTKHKPDLLQEAE*
Ga0116225_100869023300009524Peatlands SoilMRRKRKQILDKGVEARRRARNSGLSPAVTRVVADKRKKPPKHRKDLLPEEV*
Ga0116115_100071613300009631PeatlandRKRKQKLDKGVEARRRALNSGLSPAVTRVVADKRTKRPKHRKDLLREEV*
Ga0126374_1099021023300009792Tropical Forest SoilMAKRRKKRLDKGTEARRRARRSGLAPSGTRVIPDKRKKPERHKPDLLQELGE*
Ga0126380_1020109423300010043Tropical Forest SoilMKRGRKQLDKATEARRRARRSGIAPASTRIIEDKRKRPPKHKRNPLRDEDL*
Ga0126384_1061646613300010046Tropical Forest SoilLDKGTEARRRARRSGLAPANTRVIPDKRKKPEKHKPDLLREID*
Ga0126384_1103773523300010046Tropical Forest SoilMANRKKKRLDKGIEARRRARRSGLAPANTRVIPDKRKKPAKHKPNLLQELE*
Ga0126384_1127586613300010046Tropical Forest SoilMKKRKKILDAGTEARRRARKTGLAPSGTRVIPDKRKKPEKHKRDWREEAES*
Ga0126382_1109709623300010047Tropical Forest SoilMKRGRKQLDKATEARRRARRSGIAPASTRIIEDKRKRPPKHKRNPMRDEDL*
Ga0126373_1037872633300010048Tropical Forest SoilMAKRKRKRLDKGTEARRRARRSGLAPSGTRVIPDKRKKPGKHKPDLLQELGE*
Ga0126373_1055273523300010048Tropical Forest SoilMKRRKPRLEKGTEARRRARRSGLAPGATRIIEDKRQKPDKHKKNLLLQAEES*
Ga0126373_1220866613300010048Tropical Forest SoilMAKRGKKRLDKGTEARRRARRSGLAPANTRVIPDKRKKPEKHKPDLLREMD*
Ga0126373_1263782713300010048Tropical Forest SoilLDKGTEARRRARSSGLAPSNTRVIPDKRKKPEKHKPNLLQELE*
Ga0074045_1001256953300010341Bog Forest SoilMRRKRKQILDKGVEARRRARNSGLSPAVTRVVADKRKKPPKHKEALLREEV*
Ga0074044_1001007413300010343Bog Forest SoilMKRKQKLDKGVEARRRARNSGLSPAVTRVVADKRKKPAKHRKDL
Ga0126370_1021813833300010358Tropical Forest SoilRKKKLDKGVEARRRARKVGLIPLTTRVVPDKRKKPEKHKRNLLHEDV*
Ga0126372_1022701233300010360Tropical Forest SoilMANRKKKRLDKGIEARRRARRSGLAPASTRVIPDKRKKPAKHKPNLPQELE*
Ga0126372_1260201823300010360Tropical Forest SoilMAKRGKRRLDKGTEARRRARRSGLAPANTRVIPDKRKKPEKHKPDLLREID*
Ga0126378_1075571433300010361Tropical Forest SoilEMAKRRKKRLDKGTEARRRARRSGLAPSGTRVIPDKRKKPERHKPDLLQELGE*
Ga0126378_1197001423300010361Tropical Forest SoilMKRRKPRLEKGTEARRRARRSGLAPGTTRIIEDKRQKPDKHKKNLLLQAEES*
Ga0126379_1022292823300010366Tropical Forest SoilMARAKKERMDKGVEARRRARRSGLVPSGTRVIPDKRKKPEKHKKDLLQESDPDRT*
Ga0126381_10104700813300010376Tropical Forest SoilMKRRKPRLEKGTEARRRARRSGLAPGTTRIIEDKRQKPDKHKKNLLLQADES*
Ga0136449_10101692623300010379Peatlands SoilMRRARKKKLDQGVEARRRARKAGLVPATTRVVPDKRKKPEKHKRDLLLEDV*
Ga0150983_1627188623300011120Forest SoilEMVKRKKDRLEKGTEARRRARKSGLAPAGTRVIPDKRTKPAKHKPDLLREVD*
Ga0137389_1168507013300012096Vadose Zone SoilKDRLEKGTEARRRARKSGLRPANTRVIPDKRKKPGKHKSDLLLELD*
Ga0137363_1037771613300012202Vadose Zone SoilKDRLEKGTEARRRARKSGLAPAGTRVIPDKRRKPQKHKPDLIQELD*
Ga0137363_1102309513300012202Vadose Zone SoilKDRLEKGTEARRRARKSGLAPAGTRVIPDKRRKPEKHKPDLIQELD*
Ga0137363_1165949923300012202Vadose Zone SoilMVKRKKDRLEKGTEARRRARKSGLAPAGTRVIPDKRRKPQKHKPDLIEELD*
Ga0137399_1104755223300012203Vadose Zone SoilEKGTEARRRARKSGLAPAGTRVIPDKRRKPEKHKPDLIQELD*
Ga0137360_1027539223300012361Vadose Zone SoilMVKRKKDRLEKGTEARRRARKSGLAPAGTPVIPDKRKTPEKHKPDLIQELD*
Ga0137361_1027853123300012362Vadose Zone SoilMVKRKKDRLEKGTEARRRARKSGLAPAGTRVIPDKRRKPEKHKPDLLHQVD*
Ga0137390_1016306523300012363Vadose Zone SoilMVKRKKDRLEKGTEARRRARKSGLAPAGTRVIPDKRKRPEKHKPDLLREVG*
Ga0137398_1002197433300012683Vadose Zone SoilMVKRKKDRLEKGTEARRRARKSGLAPAGTRVIPDKRGKPEKHKPDLIQELD*
Ga0137394_1012446633300012922Vadose Zone SoilMVKQKKDRLEKGTEARRRARKSGLAPAGTRVIPDKRRKPQKHKPDLIQELD*
Ga0137413_1044047413300012924Vadose Zone SoilMRKKKKLDAATEARRRARKAGLAPSGTKVIPDKRNRPEKHKRDWAAEPAVD*
Ga0137404_1003536233300012929Vadose Zone SoilMVKRKKDRLEKGTEARRRARKSGLAPAGTRVIPDKRRKPQKHKPDLIQELD*
Ga0126369_1009288733300012971Tropical Forest SoilMKRRKPRLEKGTEARRRARRSGLAPGTTRIIEDKRQKPDKHKRNLLLQADES*
Ga0181534_1077170123300014168BogMARVRKRKLDKGAEARRLARKIAPVPGSTRIVPDKRKKPEKHKKRIIPEEE*
Ga0137403_1008562123300015264Vadose Zone SoilMVKRKKDRLEKGTEARRRARKSGLAPAGTRVIPDKRRKPEKHKPDLIQESA*
Ga0182033_1000603913300016319SoilMSRARKKKLDKGVEARRRARKVGLIPATTRVVPDQRKKPEKHKRDLLHEDV
Ga0182033_1010660933300016319SoilMKRRKPRLEKGTEARRRARRSGLAPGTTRIIEDKRQKPDKHKNNLLLQADES
Ga0182035_1028439013300016341SoilMKRPKKNLDKGNEARRRARKSGLAAATTRIIEDKRRRPPKHRPDLLR
Ga0182034_1000412923300016371SoilMKRLRKRKLDKGLEARRLARKVGLAAATTRVIPDKRKKPEKHKSDLLRHEEWGS
Ga0182034_1179307113300016371SoilQGVKMKRPKKKLDKGNEARRRARKSGLAAATTRIIEDKRRRPPKHRPDLLRGAEEL
Ga0182037_1072574713300016404SoilMKRLRKRKLDKGLEARRLARKVGLAAATTRVIPDKRKKPEKHKS
Ga0182039_1200262713300016422SoilMAKRKRKRLDKGTEARRRTRRSGLAPSGTRVIPDKRKKPERHKPDLLQELGE
Ga0187802_1001393623300017822Freshwater SedimentMRRPRKKLDKGTEARRVARKSGIKPGVTRVIPDKRKKPPKHKPDLLREAFET
Ga0187802_1001459223300017822Freshwater SedimentMKRPGKKLDKGTEARRVARKSGIKPGATRVVPDKRNKPSKHKPDLLRETLDI
Ga0187818_1008308223300017823Freshwater SedimentVKRKRQQKLDKGVEARRLARKSGLAPAVTRVIADKRKKLPKHRKDLLQEEV
Ga0187801_1015731123300017933Freshwater SedimentMKQRKKLLEKGKEARRRARRSGLAPATTRIIEDKRRKPPRHKLDLAPEED
Ga0187801_1051952013300017933Freshwater SedimentKQKLDKGVEARRLARKSGLVPAVTRVIADKRRKPPKHRKDLLREEG
Ga0187803_10000033443300017934Freshwater SedimentMKRRKKSLDKGTEARRVARKSGLAPAATRVIPDKRKKPPKHKTDLLGEMREI
Ga0187803_1004376923300017934Freshwater SedimentMKRKRKQKLDKGVEARRLARKSGLVPAVTRVIADKRRKPPKHRKDLLREEG
Ga0187803_1041914613300017934Freshwater SedimentKRKQKLDKGVEARRRARNSGLSPAATRVVADKRKKPPKHRTKLLQDEV
Ga0187809_1008557133300017937Freshwater SedimentMKRPGKKLDKGTEARRVARKSGIKPGATRVVPDKRNKPSKHKPDLLGETLDI
Ga0187775_1037791113300017939Tropical PeatlandMKSRRKKLDKGAEARRIARKSGLAPAATRVIPDKRKKPPRHKKD
Ga0187817_1021037123300017955Freshwater SedimentMKQRKKLLEKGKEARRRARRSGLAPATTRIIEDKRRKPPRHKLGLAPEED
Ga0187779_1000443323300017959Tropical PeatlandMRRRKKKLDKGAEARRLARKSGLAPGATRVIPDKRKKPSKHKTTLLDNMQEI
Ga0187778_1016658223300017961Tropical PeatlandMKRKHKQPLDKGVEARRRARDSGLSPAATRVVADKRKKPPKYRKDMLQEEM
Ga0187778_1022968413300017961Tropical PeatlandMRRRKKKLDKGAEARRLARKSGLAPGATRVIPDKRKKPSKHKATLLDNLQEI
Ga0187776_1014341123300017966Tropical PeatlandMKSRRKKLDKGAEARRIARKSGLAPAATRVIPDKRKKPPRHKKDQEDLDI
Ga0187782_10001402103300017975Tropical PeatlandMRRRKKKLDKGTEARRLARKSRLVAGATRVIPDKRKKPSRHKTTLLDDLQGI
Ga0187772_1000355843300018085Tropical PeatlandLKERSKQLDKGAEARRVARKSAASPGATRVIPDKRKKPLKHKIDPLRKLSDI
Ga0187772_1143761123300018085Tropical PeatlandMKNRRKALEKGVEARRRARSSGLAPAATRVIEDKRRKSPKHKKNLLREED
Ga0187771_1011541023300018088Tropical PeatlandVKRKRQQKLDKGVEARRLARKSGLAPAVTRVIADKRKKPAKHRQDLLQEET
Ga0187771_1038738923300018088Tropical PeatlandMKRKHKQTLDKGVEARRRARKSGLSPAATRVVVDKRKKPPKHRKDIFHEEL
Ga0187770_1023827823300018090Tropical PeatlandVKRKRQQKLDKGVEARRLARKSGLAPAVTRVIADKRKKAPKHRKDLLQEET
Ga0187770_1079333323300018090Tropical PeatlandMKRNRKQKLDKAVEARRRARNSGLSPAATRVVADKRKKPPKHKPDLLHKET
Ga0179590_107512823300020140Vadose Zone SoilMVKRKKDRLEKGTEARRRARKSGLAPAGTRVIPDKRRKPQKHKPDLIQELD
Ga0210407_10000030343300020579SoilMVKRKKIRLEKGTEARRRARKSGLAPAGTRVIPDKRRKPEKHKLDMLQEVD
Ga0210407_1003389343300020579SoilMVKRKKDRLEKGTEARRRARKSGLTPAGTRVIPDKRRKPAKHKPDLLREVD
Ga0210407_1013381823300020579SoilMVKRKKDRLEKGTEARRRARKSGLVPAGTRVIPDKRGKPAKHKPDLLREVD
Ga0210407_1123948723300020579SoilMVKRKKNRLEKGAEARRRARKSGLAPAGTRVIPDKRSKPEKHKPDLLREFD
Ga0210403_1000482073300020580SoilMVKRKKDRLEKGTEARRRARKSGLAPAGTRVIPDKRRKPEKHKPDLIQEVD
Ga0210403_1044970633300020580SoilGNTKMVKRKKNRLEKGTEARRRARKSGLAPAGTRVIPDKRTKPEKHKPDHLQELD
Ga0210403_1071924813300020580SoilMKGAKKKLDKGAEARRLARKVAGAPANTRVIPDKRKMPAKHKLDLLREEL
Ga0210403_1123655813300020580SoilMAKRKKDRLEKGTEARRRARKSGLRPANTRVIPDKRGKPGKHKPDMLQELD
Ga0210399_1001293343300020581SoilMKRVRKKKLDKGAEARRLARKVAGVPANTRVIPDKRKMPAKHKLDLLREEL
Ga0210399_1008447143300020581SoilMVKRKKDRLEKGAEARRRARKSGLAPAGTRVIPDKRRKPEKHKPDMLQEVD
Ga0210399_1072725923300020581SoilMVKRKKDRLEKGAEARRRARKSGLAPAGTRVIPDKRRKPEKHKPDML
Ga0210399_1077001123300020581SoilMSRARKKKLDKGVEARRRARKVGLIPAATRVVPDKRKKPEKHKGDLLHEDV
Ga0210399_1155024423300020581SoilMVKRKKDRLEKGTEARRRARKSGLAPAGTRVIPDKRRKPAKHRP
Ga0210395_1021734923300020582SoilMNSRKKKLDKSTEARRVARKSGLAPAATRVIPDKRKKPPKHAKDLLREESEP
Ga0210401_1008611533300020583SoilMAKQKKVRLEKGTEARRRARKSGLAPAGTRVIPDKRRKPEKHKPDLLHQLD
Ga0210401_1067899733300020583SoilRKKNFEKGTEARRRARASGMKPATTKVVADKRKKPPKHKPDLLQEAE
Ga0210401_1161989313300020583SoilMAKPKKDRLEKGTEARRRARKSGLAPAGTRVIPDKRKKPEKHRPDL
Ga0210406_1026425423300021168SoilMVKRKKDRLEKGTEARRRARKSGLAPAGTRVIPDKRRKPAKHKPDLLREVE
Ga0210406_1035267513300021168SoilMVKRKKDRLEKGTEARRRARKSGLAPAGTRVIPDKRRKPAKHKPDLL
Ga0210400_10000012223300021170SoilMRGRGMRKKKLDAGVEARRRARKTGLAPSGTRVIPDKRQKPEKHKKNWKEEQEG
Ga0210405_10000379313300021171SoilMKRKKDRLEKGTEARRRARKSGLAPAGTRVIPDKRGRPEKHKPDLLREVD
Ga0210405_1065310423300021171SoilMTPLQKKELDKGAEARRLARKSGIVPATTRVVPDKRKKPEKHKKRLILEEE
Ga0210386_1021913323300021406SoilMVKRKKNRLEKGAETRRRARKSGLAPAGTRVIPDKRSKPEKHKPDLLREFD
Ga0210394_10000009893300021420SoilMVKRKRDRLEKGTEARRRARKSGLAPAGTRVIPDKRKKAEKHKPDLIQEVD
Ga0210394_100001331393300021420SoilMVKRKKDRLEKGTEARRRARKSGLAPAGTRIIPDKRGKPAKHKPDLLREVD
Ga0210394_1023471823300021420SoilMVKRKKDRLEKGTEARRRARKSGLAPAGTRVIPDKRTKPAKHKPDLLREVD
Ga0210394_1090397023300021420SoilKRAEMKRVRKKKLDKGAEARRLARKVAGVPANTRVIPDKRKMPAKHKLDLLREEL
Ga0210394_1131865513300021420SoilDRLEKGTEARRRARKSGLRPANTRVIPDKRGKPGKHKPDMLQELD
Ga0210384_10008744103300021432SoilMRRVRKKKLDKGAEARRLARKVAGAPANTRVIPDKRKRPEKHRKDLLRQEF
Ga0210384_1090323513300021432SoilMVKRKKNRLEKGTEARRRARKSGLAPAGTRVIPDKRSKPEKHKPDLLREFD
Ga0210384_1171623023300021432SoilMVKRKKDRLEKGTEARRRARKSGLAPAGTRVIPDKRRKPAKHKPDLLREVD
Ga0210391_1041384823300021433SoilMKRRRTKLDKAVEARRVARKFGLAPGSTRVIPDKRKKPQKHRKALQNEAEEL
Ga0210402_1097956823300021478SoilMRRARNKKLEKGVEARRLARKVVGAPANTRVIPDKRKRPEKHKRDLLGEE
Ga0210402_1101061213300021478SoilMVKRKKDRLEKGTEARRRARKSGLAPAGTRVIPDKRRKPEKHKPDLLQEAE
Ga0210409_1008658933300021559SoilMVKRKKDRLEKGTEARRRARKSGLAPAGTRVIPDKRRKPAKHKPD
Ga0210409_1154412813300021559SoilMVKRKKNRLEKGTEARRRARKSGLAPAGTRVIPDKRSKPEKHKPDLLRE
Ga0126371_1001173563300021560Tropical Forest SoilMKRRKPRLEKGTEARRRARRSGLAPGTTRIIEDKRQKPDKHKRNLLLQADES
Ga0126371_1005734223300021560Tropical Forest SoilMARGKKERMDKGVEARRRARRSGLVPSGTRVIPDKRKKPEKHKKDLLQESDPDRT
Ga0126371_1294234913300021560Tropical Forest SoilMANRKKKRLDKGIEARRRARRSGLAPANTRVIPDKRKKPAKHKPNLLQELE
Ga0242662_1003222833300022533SoilEMVKRKKIRLEKGTEARRRARKSGLAPAGTRVIPDKRRKPEKHKLDMLQEVD
Ga0208323_105698823300025439PeatlandKRKQKLDKGVEARRRARNSGLAPAVTRVVADKRRKSPKHRKDLLREEV
Ga0208688_100984743300025480PeatlandQKLDKGVEARRRARNSGLAPAVTRVVADKRRKPPKHRKDLLREEV
Ga0209584_1018300123300025878Arctic Peat SoilMAKSRKKQLDKGTEARRLARKIGVPPSTTRVIPDKRKKPAKHKGKDLIVEE
Ga0257153_100687033300026490SoilMVKRKKDRLEKGTEARRRARKSGLAPAGTRVIPDKRRKPEKHKPDLIQELD
Ga0207781_103152413300026890Tropical Forest SoilRKKKLDKGAEARRRARKSGLTPSATRVIADKRGRPPKHKGDLIRDADEI
Ga0207743_102129923300026945Tropical Forest SoilKKLDKGTEARRLARKSGLVPGMTRVVEDKRQKPPKHKHDLLSEND
Ga0207835_103971023300026953Tropical Forest SoilKLDKGTEARRLARKSGLVPGMTRVVEDKRQKPPKHKHDLLSEND
Ga0207817_100216413300026979Tropical Forest SoilRRRKKLDKGTEARRLARKSGLVPGMTRVVEDKRQKPPKHKHDLLSEND
Ga0209004_102471223300027376Forest SoilMVKRKKVRLEKGTEARRRARKSGLAPAGTRVIPDKRRKPEKHKPDLLQQLD
Ga0208044_118043913300027625Peatlands SoilMRRKRKQKLDKGVEARRRARNSGLSPGVTRVVADKRKKPPKHKEGLLREEV
Ga0209581_10000423733300027706Surface SoilMAKRRKKQLDKGLEARRRARRAGLAPGGTRVIPDKRKKPEKHKADLLAEVD
Ga0209448_1024411813300027783Bog Forest SoilMKRGRRKKLDKGTEARRLARKVAGVPANTRVIPDKRKRPEKHKPDLLREEV
Ga0209656_1009747533300027812Bog Forest SoilRVEMRRARNKKLDKGVEARRRARKSGLIAATTRVVPDKRKKPEKHKPDLFDEEV
Ga0209517_100000091283300027854Peatlands SoilMRRKRKQILDKGVEARRRARNSGLSPAVTRVVADKRKKPPKHRKDLLPEEV
Ga0209167_1021717113300027867Surface SoilMKRGRKKKLDKGTEARRLARKVAGVPANTRVVPDKRKQPEKHKPDLLTEEL
Ga0209275_1001318723300027884SoilMVKRRKDRLEKGTEARRRARKSGLAPAGTRVIPDKRRKPAKHKPDLLREVD
Ga0209380_1059268623300027889SoilMRRGRKKKLDKGTEARRLARKVAGVPANTRVIPDKRKRPEKHKPDLLREEL
Ga0209698_1001026523300027911WatershedsMKKRKKKGLDKGVEARRRARRSGLAPAGTRVIPDKRKKPVKHRADLLNEFKLDGI
Ga0209526_1004610643300028047Forest SoilMVKRKRARLEKGTEARRRARKSGLAPAGTRVIPDKRKKAEKHKPDLIQEVD
Ga0222749_1022329333300029636SoilRKKNRLEKGAEARRRARKSGLAPAGTRVIPDKRSKPEKHKPDLLREFD
Ga0307482_122982123300030730Hardwood Forest SoilMVKRKKDRLEKGTEARRRARKSGLAPAGTRVIPDKRRKAAKHKPDLLREVE
(restricted) Ga0255311_103298823300031150Sandy SoilMRRKRKKTLDKGTEARRRARASGLAPAGTRVIADKRKKPAKHKTDLLREEALQ
Ga0170819_1230139223300031469Forest SoilMSRARKKKLHKGVEARRRARKAGLVPATTRVVPDKRKKPAKHKRDLLREDL
Ga0170818_10269584723300031474Forest SoilMSRARKKKLDKGVEARRRARKAGLVPATTRVVPDKRKKPAKHKRDLLREDP
Ga0170818_10994037813300031474Forest SoilEKGTEARRRARKSGLRPANTRVIPDKRKKLDKHKPDLLQQLD
Ga0318541_1019001023300031545SoilMKRRKPRLEKGTEARRRARRSGLAPGTTRIIEDKRQKPDKHKKNLLLQADES
Ga0318541_1033409823300031545SoilKRLRKRKLDKGLEARRLARKVGLAAATTRVIPDKRKKPEKHKSDLLRHEELGS
Ga0307474_1135974913300031718Hardwood Forest SoilMAKRKKVRLEKGTEARRRARKSGLAPAGTRVIPDKRRKPEKHKPDLLHQLD
Ga0306917_1015101123300031719SoilMARRKKERMDKGVEARRRARRSGLAPSGTRVIPDKRKKPEKHRKDLLQEPDPDRTW
Ga0307469_1025403423300031720Hardwood Forest SoilMKRRKVKLDKGTEARRMARKFGLAPAGTRVIPDKRKKPPKHKKDFLIERLDT
Ga0307469_1137964123300031720Hardwood Forest SoilSQRRAEMVKRKKDRLEKGTEARRRARKSGLAPAGTRVIPDKRRKPAKHKPDLLLEVE
Ga0307475_1078816823300031754Hardwood Forest SoilQRRAEMVKRKKDRLEKGTEARRRARKSGLTPAGTRVIPDKRRKPAKHKPDLLREVD
Ga0306919_1019818423300031879SoilMKRLRKRKLDKGLEARRLARKVGLAAATTRVIPDKRKKPEKHKSDLLRHE
Ga0306919_1027750623300031879SoilMKRPKKNLDKGNEARRRARKSGLAAATTRIIEDKRRRPPKHRPDLLRGAEEL
Ga0306919_1074606613300031879SoilGTEARRRARRSGLAPGTTRIIEDKRQKPDKHKKNLLLQADES
Ga0306919_1097406323300031879SoilRRAEMSRARKKELDKGVEARRRARKVGLVPATTRVVPDKRKKPAKHKRDLLHEDV
Ga0306925_1198395623300031890SoilMSRARKKKLDKGVEARRRARKVGLIPATTRVVPDKRKRPEKHKRDLLHEDV
Ga0306923_10000912133300031910SoilMKRLRKRKLDKGLEARRLARKVGLAAATTRVIPDKRKKPEKHKSDLLRHEELGS
Ga0306921_10002502123300031912SoilMKRLRKRKLDKGLEARRLARKVGLAAATTRVIPDKRKKPEKHKSDLL
Ga0306921_1010807553300031912SoilLRRRKLDKGLEARRLARKVGLAAATTRVIPDKRKKPEKHKSDLLRHEELGS
Ga0310913_1028109023300031945SoilMKRRKPRLEKGTEARRRARRSGLAPGATRIIGDKRQKPDKHKKNLLLQADES
Ga0310910_1001254113300031946SoilLDKGLEARRLARKVGLAAATTRVIPDKRKKPEKHKSDLLRHEELGS
Ga0310910_1116034523300031946SoilMKRRKPRLEKGTEARRRARRSGLAPGATRIIGDKRQKPDKHKKNLLLQAEES
Ga0306926_1136901513300031954SoilKERLDKGVEARRRARRSELAPSGTRVIPDKRKKPEKHKKDLLQESDPDRT
Ga0306926_1293371023300031954SoilMSRARKKELDKGVEARRRARKVGLVPATTRVVPDKRKKPAKHKRDLLHE
Ga0311301_1255490513300032160Peatlands SoilMRRARKKKLDQGVEARRRARKAGLVPATTRVVPDKRKKPEKHKRDLLLEDV
Ga0307470_1032560623300032174Hardwood Forest SoilMVKRKKDRLEKGTEARRRARKSGLAPAGTRVIPDKRRKPQKHKPDLLQEED
Ga0307470_1135331223300032174Hardwood Forest SoilMVKRKKDRLEKGTEARRRARKSCLAPGGTRVIPDKRRKPQKHKPDLIQELD
Ga0307471_10003812643300032180Hardwood Forest SoilMVKRKKDRLEKGTEARRRARKSGLAPAGTRVIPDKRRKPTKHKPDLLREVD
Ga0307471_10145941723300032180Hardwood Forest SoilMVKRKKDRLEKGTEARRRARKSGLAPAGTRVIPDKRRKPQKHKPDLLQEVD
Ga0307471_10316711923300032180Hardwood Forest SoilMSRARKKKLDKGVEARRRARKVGLIPATTRVVLDKRKKPEKHKGDL
Ga0307472_10014244033300032205Hardwood Forest SoilMSRARKKKLDKGVEARRRARKAGLVPATTRVVPDKRKKPAKHKRDLLREDL
Ga0307472_10080710913300032205Hardwood Forest SoilMMRRKVKLDKGTEARRVARKSGLAPAGTRVIPDKRKKPPKHKKDSLIEPPDV
Ga0306920_10105956523300032261SoilMANRKKKRLDKGIEARRRARRSGLAPANTRVIPDKRKKPEKHKPNLLQELE
Ga0306920_10198415623300032261SoilMARGKKERLDKGVEARRRARRSGLVPSGTRVIPDKRKKPEKHKRDLLEESDADRT
Ga0335085_10002394123300032770SoilMKPRKKKLDKGTEARRVARKSGLAPAVTRVIPDKRKKPLKHKQDLLRDTLEA
Ga0335085_1001103983300032770SoilMAKRKKKRLDKGVEARRRARRSGLAPAGTRVIPDKRKKPERHKPDLLAEIE
Ga0335085_1049557123300032770SoilMAKRKKKRLDKGVEARRRARRSGLAPAGTRVIPDKRKKTEKHRPDLLAEVD
Ga0335082_1081524923300032782SoilMAKRKKKRLDKGVEARRRARKSGLAPAGTRVIPDKRMKPEKHRPDLLAEVD
Ga0335080_1101431723300032828SoilMAKRKKKRLDKGVEARRRARRSGLAPAGTRVIPDKRNKPEKHKPDLLAEVD
Ga0335080_1221763023300032828SoilMARGRKKLDKATEARRRARKSATAPASTRVIEDKRKRPPKHKRDLVREVEDV
Ga0335070_1002052533300032829SoilMARKRKKLDKGTEARRRARRSAIAPGSTRVIQDKRRRPPKHKPDLLREGDDL
Ga0335070_1165744513300032829SoilMKHKRKQKLDKGVEARRRARNSGLVPGVTRVVADKRKKPPKHRKDLLQEEA
Ga0335069_1005022223300032893SoilMARKRKKLDKGTEARRRARRSGIAPGSTRVIQDKRTRPPKHKPDLLREGDDL
Ga0335069_1156868113300032893SoilMAKRRKKRLDKGVEARRRARRSGLTPAGTRVIPDKRKKPEKHRVELTEELD
Ga0335072_1003354943300032898SoilMKRAKKKLDKSTEARRMARKSGLTPSATRVIPDKRKKPPRHKIDPLRESLDI
Ga0335077_1008678443300033158SoilKKKRLDKGVEARRRARKSGLAPAGTRVIPDKRKKPEKHRPDLLAEVD
Ga0326728_1029402813300033402Peat SoilLGAPGLAMKRKRKQILDKGVEARRLARKSGLAPAVTRVIADKRKKPPKHKKAILQEEA
Ga0326728_1104430013300033402Peat SoilKLDKGVEARRRARNSGLSPAVTRVVADKRKKPPKHRQDLLHEEV
Ga0314863_110047_125_2803300033804PeatlandMKHKRKQKLDKGVEARRRARNSGLAPAVTRVVADKRKKPPKHKQDLFHEEG
Ga0314867_122132_170_3253300033808PeatlandMKRKHKQPLDKGVEARRRARDSGLSPAATRVVADKRKKPPKHKKDMLHEDL
Ga0371488_0115987_1301_14563300033983Peat SoilMKRKCKQKLDKGAEARRRARNSGLFPAATRVVADKRKKPPKHRKDLLREEV
Ga0326724_0390094_322_4983300034091Peat SoilLGAPGLAMKRKRKQILDKGVEARRLARKSGLAPAVTRVIADKRKKPPKHKKALLQEEA


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.