NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F020775

Metagenome Family F020775

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F020775
Family Type Metagenome
Number of Sequences 222
Average Sequence Length 45 residues
Representative Sequence MSNFLSQLTKSEQARLLEELNYMNLEEIRGFCSERGIPYRIVA
Number of Associated Samples 164
Number of Associated Scaffolds 222

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 67.27 %
% of genes near scaffold ends (potentially truncated) 95.95 %
% of genes from short scaffolds (< 2000 bps) 94.14 %
Associated GOLD sequencing projects 152
AlphaFold2 3D model prediction Yes
3D model pTM-score0.56

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (92.793 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere
(11.261 % of family members)
Environment Ontology (ENVO) Unclassified
(34.234 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(50.450 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64
1FWIRA_01664360
2ICChiseqgaiiFebDRAFT_106029091
3INPhiseqgaiiFebDRAFT_1011544561
4AP72_2010_repI_A100DRAFT_10613392
5C688J35102_1191880661
6Ga0062589_1026776332
7Ga0062592_1001123261
8Ga0062592_1004895712
9Ga0062592_1012860571
10Ga0062591_1004074601
11Ga0062591_1008135591
12Ga0066677_101542943
13Ga0066679_105384241
14Ga0066685_105175463
15Ga0065704_104960521
16Ga0065712_101025554
17Ga0065712_108019091
18Ga0065705_104957141
19Ga0065707_104046801
20Ga0065707_108284032
21Ga0070676_115543702
22Ga0066388_1036387932
23Ga0066388_1058137652
24Ga0070666_102904673
25Ga0070675_1002012173
26Ga0070688_1005621162
27Ga0070711_1007788962
28Ga0070678_1006971391
29Ga0070678_1018524072
30Ga0070698_1012354491
31Ga0070730_104384282
32Ga0070704_1007147384
33Ga0070704_1011941381
34Ga0070704_1015898552
35Ga0070704_1017565052
36Ga0066699_101838881
37Ga0070702_1002448013
38Ga0066903_1073431422
39Ga0068870_113057041
40Ga0068858_1002011744
41Ga0068860_1016150721
42Ga0068860_1024490821
43Ga0068862_1025534142
44Ga0081455_104908891
45Ga0070717_116435642
46Ga0066652_1000930943
47Ga0075417_107434862
48Ga0075017_1012457353
49Ga0075018_105897132
50Ga0066665_109808251
51Ga0066659_112322881
52Ga0075430_1000058841
53Ga0075431_1003955293
54Ga0075433_116073412
55Ga0075433_116127922
56Ga0075425_1012531632
57Ga0075425_1018622531
58Ga0075425_1031015292
59Ga0075434_1000156201
60Ga0079217_104661452
61Ga0075426_102104441
62Ga0075426_103682952
63Ga0075424_1002619563
64Ga0075424_1009393422
65Ga0075424_1013338652
66Ga0075424_1015434781
67Ga0075424_1023368461
68Ga0075419_114926481
69Ga0079218_108250231
70Ga0079218_115847821
71Ga0075435_1000811201
72Ga0075435_1003219871
73Ga0075435_1011160611
74Ga0066710_1040876422
75Ga0099828_117002081
76Ga0105240_117174611
77Ga0105245_103847831
78Ga0066709_1017988971
79Ga0099792_111352172
80Ga0114129_132075402
81Ga0105243_111606012
82Ga0075423_104999283
83Ga0105242_130422693
84Ga0105248_119473083
85Ga0105248_123680111
86Ga0105248_124058262
87Ga0105248_131464861
88Ga0126372_101032861
89Ga0126378_121582221
90Ga0126377_110325371
91Ga0126379_108218982
92Ga0134122_113515581
93Ga0134122_114074441
94Ga0134121_117711632
95Ga0134121_123058342
96Ga0134123_100566254
97Ga0134123_103597351
98Ga0137436_10902302
99Ga0137455_11896592
100Ga0137423_10560003
101Ga0137344_10946951
102Ga0137388_103198483
103Ga0137399_116639361
104Ga0137387_108795081
105Ga0137366_103931751
106Ga0137369_111360991
107Ga0137360_117718722
108Ga0157296_102096582
109Ga0137419_100700361
110Ga0164301_116094242
111Ga0126369_103358134
112Ga0164306_112183022
113Ga0164305_103702381
114Ga0164305_112351092
115Ga0163162_106559392
116Ga0157375_120583112
117Ga0163163_102603053
118Ga0163163_109554303
119Ga0163163_121089952
120Ga0157380_103309873
121Ga0157380_114348891
122Ga0157380_118639982
123Ga0157377_104297472
124Ga0173480_104651941
125Ga0173480_105824401
126Ga0137418_110396581
127Ga0137409_101841581
128Ga0137409_102922631
129Ga0180071_10835561
130Ga0180085_12466732
131Ga0132258_138342162
132Ga0132258_138685563
133Ga0132256_1017532882
134Ga0132256_1021342602
135Ga0132256_1034302702
136Ga0132257_1032013681
137Ga0132257_1043007622
138Ga0184610_13072431
139Ga0184605_103966481
140Ga0184611_10221964
141Ga0184629_102690641
142Ga0184629_104671981
143Ga0066662_121300861
144Ga0066669_104989973
145Ga0173481_103681312
146Ga0173482_100940021
147Ga0193699_103982612
148Ga0210409_113608252
149Ga0222622_101173773
150Ga0222622_109495301
151Ga0247686_10369871
152Ga0207680_105149973
153Ga0207680_113731491
154Ga0207645_102641613
155Ga0207663_104715142
156Ga0207646_101585881
157Ga0207646_101805423
158Ga0207646_114728641
159Ga0207650_115572662
160Ga0207701_107396271
161Ga0207709_113043372
162Ga0207670_108861091
163Ga0207669_115901611
164Ga0207711_100062361
165Ga0207679_101468882
166Ga0207651_115588802
167Ga0207677_120180782
168Ga0207703_103799982
169Ga0207708_103773043
170Ga0207648_100239141
171Ga0207675_1012396283
172Ga0207675_1025300231
173Ga0207683_111769742
174Ga0209236_11632512
175Ga0209818_10644041
176Ga0209814_103901361
177Ga0209814_104052802
178Ga0209814_104193541
179Ga0209590_102514811
180Ga0209486_100666812
181Ga0268264_117476901
182Ga0268264_118080102
183Ga0247828_110343042
184Ga0247828_111549012
185Ga0307305_103053432
186Ga0307304_105829141
187Ga0310888_103814782
188Ga0310887_101361893
189Ga0310887_102079241
190Ga0310887_103839981
191Ga0310887_104670551
192Ga0310887_107932722
193Ga0318560_107283622
194Ga0310813_109524472
195Ga0307469_110457861
196Ga0307405_110919892
197Ga0307468_1014261672
198Ga0306918_109820201
199Ga0307473_104684402
200Ga0307413_101489491
201Ga0307410_119860781
202Ga0310904_107374441
203Ga0310904_113344861
204Ga0310904_113490531
205Ga0310892_102935281
206Ga0310892_108214871
207Ga0310900_110566002
208Ga0307412_115708881
209Ga0310885_102481391
210Ga0310903_105501682
211Ga0307416_1002630831
212Ga0310906_108903582
213Ga0310899_101452633
214Ga0310890_113802502
215Ga0307415_1015627332
216Ga0315912_103759212
217Ga0307471_1012871312
218Ga0307471_1024595941
219Ga0307471_1042009382
220Ga0247830_103152593
221Ga0364933_016931_1606_1725
222Ga0364923_0070211_725_850
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 36.62%    β-sheet: 0.00%    Coil/Unstructured: 63.38%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

510152025303540MSNFLSQLTKSEQARLLEELNYMNLEEIRGFCSERGIPYRIVASequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.56
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
92.8%7.2%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Soil
Groundwater Sediment
Watersheds
Groundwater Sediment
Soil
Soil
Vadose Zone Soil
Terrestrial Soil
Tropical Forest Soil
Surface Soil
Switchgrass Rhizosphere
Soil
Agricultural Soil
Soil
Grasslands Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Soil
Forest Soil
Soil
Hardwood Forest Soil
Soil
Soil
Tropical Forest Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Switchgrass Rhizosphere
Sediment
Arabidopsis Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Tabebuia Heterophylla Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Populus Rhizosphere
Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Arabidopsis Rhizosphere
6.3%5.9%3.6%9.0%5.9%4.1%11.3%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
FWIRA_016643602124908009SoilMPNFLSQLSKSEQARLLEELNYMNLEEIRGFCSARRI
ICChiseqgaiiFebDRAFT_1060290913300000363SoilMPNPLSKLTKGERTRLLEEMNYLNLAEIRGFCSARGIPYKI
INPhiseqgaiiFebDRAFT_10115445613300000364SoilMSNFLSQLTKSERVRLFEELNYMNLQEIRGFCSDRGIPYRIVAEYSNG
AP72_2010_repI_A100DRAFT_106133923300000837Forest SoilVTNFLSQLTKSERARLLEELNYLNLEEIRGFCSERGIPFRIVAE
C688J35102_11918806613300002568SoilMSNFLSALTNVERTRLLKELNYMNLEEIRGFCAERGIPYRIVGEYPN
Ga0062589_10267763323300004156SoilMSNFLSQLTASERARLLEELNYMNLEEIRGFCSVRGIPYRIMAES
Ga0062592_10011232613300004480SoilMSNFLAQLTASKRARLLEELNYVNLEEIRGFCSERGIPYRILAESADGK
Ga0062592_10048957123300004480SoilMSNFLSQLTKSERARLLEEMNYMNLEEIRGFCSERAIPYRIVAEYSN
Ga0062592_10128605713300004480SoilMPDFLARLTKAVQSQLFEEMNYMNLEEIRGFCSERGIPYRIVIADPDG
Ga0062591_10040746013300004643SoilMSNFLSQLTASERARLLEELNYMNLEEIRGFCSVRGIPYRI
Ga0062591_10081355913300004643SoilMSNFLSQLTKSERARLLEELNYMNLEEIRGFCSERAIPYRIVAE
Ga0066677_1015429433300005171SoilMANLLSQLTKDTQARFLEELNYLNLEEIRGFCSDRGIPYKILAEYPN
Ga0066679_1053842413300005176SoilMSNFLSQLTASERARLLKELNYMNLEEIRGFCSERGIPYRIMAESADG
Ga0066685_1051754633300005180SoilMSNFLSQLTKSEQARLLEDLNYMNLEESRGFCSERGIPYRIVAEY
Ga0065704_1049605213300005289Switchgrass RhizosphereMSNLLAQLTKTEQARFLEELNYMNLQEIRGFCSARGIPYRIVAEYPDG
Ga0065712_1010255543300005290Miscanthus RhizosphereMANYLSQLTASERARLLEELNYMNLEEIRGFCLTRAIPYRIV
Ga0065712_1080190913300005290Miscanthus RhizosphereVKRRNPLSQLTKTEQARLLEELNYMNLEEIRGFCSARGIPFR
Ga0065705_1049571413300005294Switchgrass RhizosphereMSNFLAQLTTSERARFLEELNYMNLEEIRGFCSARAIPYRIVAESS
Ga0065707_1040468013300005295Switchgrass RhizosphereMSNFLSQLTKSERARLLEELNYMNLEEIRGFCSERAIPYRIVAEY
Ga0065707_1082840323300005295Switchgrass RhizosphereMSNFLSQLTASARARLLEELNYMNLEEIRGFCSARGIPYRI
Ga0070676_1155437023300005328Miscanthus RhizosphereVKRRNPLSQLTKTEQARLLEELNYMNLEEIRGFCSARGIPFRI
Ga0066388_10363879323300005332Tropical Forest SoilMPNFLSKLTKGEQARLLEELNYMNLDEIRGFCVPRGIPYKIV
Ga0066388_10581376523300005332Tropical Forest SoilVPNLLSQLTKDEQAQLLEELNYMNLEEIRGFCSDRGIPYKIMARYP
Ga0070666_1029046733300005335Switchgrass RhizosphereMTRNSTLLSRIPKGEQARLFEKLNYMNLEEIRGFCAAHGIPYRIL
Ga0070675_10020121733300005354Miscanthus RhizosphereMSNPLSKLTKGERTRLLEELNYLNLAEIRGFCSARGIPYKIL
Ga0070688_10056211623300005365Switchgrass RhizosphereVKRRNPLSQLTKTEQARLLEELNYMNLEEIRGFCSARGIPFRIVADYPN
Ga0070711_10077889623300005439Corn, Switchgrass And Miscanthus RhizosphereMSNFLSQLAASERARLLEELNYMNLEEIRGFCSARAIPYR
Ga0070678_10069713913300005456Miscanthus RhizosphereMANMLSQLTRAEQARLLEELNYMNLEEIRAFCAARAIPFR
Ga0070678_10185240723300005456Miscanthus RhizosphereMTNFLSKLTKGEQSRLLEELNCMNLEEIRGFCFPRGIPYKIVAEYSNGKIKTT
Ga0070698_10123544913300005471Corn, Switchgrass And Miscanthus RhizosphereMPNLLSQLNKEKQARLLEDLNYMNMEEIRGFCSARGIPYKILAEYPNGKVKATKDTD
Ga0070730_1043842823300005537Surface SoilMPNFLSQLTKSKQARLLEELNYMNLEEIHGFCSARGIPYRVVAE
Ga0070704_10071473843300005549Corn, Switchgrass And Miscanthus RhizosphereMSNFLAQLTTSERARLLEELNYMNLEEIRGFCSARGIPYRIVAESSNGT*
Ga0070704_10119413813300005549Corn, Switchgrass And Miscanthus RhizosphereMPNLLSQLTKSERARLLEELNYMNLEEIRGFCSARAIPYRIVAESSNGK
Ga0070704_10158985523300005549Corn, Switchgrass And Miscanthus RhizosphereMPKFLSQLTKSGKHEELNYMNLEEIRGFCSARGIPYRIVAESSNGT
Ga0070704_10175650523300005549Corn, Switchgrass And Miscanthus RhizosphereMSNFLSQLTTSERARLLEELNYMNLEEIRGFCSARAIPYRIVAESSNGKVKATKD
Ga0066699_1018388813300005561SoilMSNFLSQLTASERARLLKELNYMNLEEIRGFCSERGIPYRIMAESADGKVKATKD
Ga0070702_10024480133300005615Corn, Switchgrass And Miscanthus RhizosphereMNVLSRLTRAERTRLLEEMNYMNLEEIRGFCSARGIPYRIVAERPNGKVTATKDTD
Ga0066903_10734314223300005764Tropical Forest SoilMPNFLSQLANSEQARFLEELNYMNLEEIRGFCSERGIPYRIVAEYSNGKVKA
Ga0068870_1130570413300005840Miscanthus RhizosphereMPNLLARLSRSEQARLLEELNYMNLDEIHGFCSARGIPFKVMAESPNGKVRATK
Ga0068858_10020117443300005842Switchgrass RhizosphereMSNFLSQLTASARARLLEELNYMNLEEIRGFCSERGIPYRIMAES
Ga0068860_10161507213300005843Switchgrass RhizosphereMPNLLSQLNKDERARLLDELNYMNMEEIRGFCTARGISYRILAE
Ga0068860_10244908213300005843Switchgrass RhizosphereMSNFLSQLTKSERARLLEELNYMNLEEIRGFCSER
Ga0068862_10255341423300005844Switchgrass RhizosphereMSNFLSQLTKSERARLLEELNYMNLEEIRGFCSERGI
Ga0081455_1049088913300005937Tabebuia Heterophylla RhizosphereMPNFLSKLTTSERARFLEELNYMNLEEIRGFCAPRGIPYKIVAEYSNGRVR
Ga0070717_1164356423300006028Corn, Switchgrass And Miscanthus RhizosphereMPNLLSQLTRDAKAQFFEELNYMNLEEIRGFCSNRGIPYKILAE
Ga0066652_10009309433300006046SoilMSNFLSQLTKGEQTRLLEDLNYMNLEEIRGFCAQRGIPYRIVAEYPNGKVKATKD
Ga0075417_1074348623300006049Populus RhizosphereMPNFLSQLTKGEQARLFEELNYMNLEEIRGFCSAR
Ga0075017_10124573533300006059WatershedsMSNFLSQLTKSERARLLEELNYMNLEEIRGFCSERGIPYRIVAESSNGKVKAT
Ga0075018_1058971323300006172WatershedsMSNFLAQLTASERARLLEELNYMNLEEIRGFCSERG
Ga0066665_1098082513300006796SoilMSNFLSQLTTSERPRLLEEVNYMNLEEIRGFCSKHGIP
Ga0066659_1123228813300006797SoilMSLLSQLSKDEQLLLFTELNYLNLGEIRGFCSERGI
Ga0075430_10000588413300006846Populus RhizosphereMSNFLSQLTASERTRLLEELNYMNLEEIRGFCSERGI
Ga0075431_10039552933300006847Populus RhizosphereMSNFLSQLTASERARLLEELNYMNLEEIRGFCSERGI
Ga0075433_1160734123300006852Populus RhizosphereMSNFLLRLTKSEQARLLEELNYMNLEEIRGFCSERGIPYRIVAAYA
Ga0075433_1161279223300006852Populus RhizosphereMSNFLSQLTKSEQARLLEELNYMNLEEIRGFCSERGIPYRIVAAYA
Ga0075425_10125316323300006854Populus RhizosphereMANFLSQLTKSERARLLEELNYMNLEEIRGFCSERA
Ga0075425_10186225313300006854Populus RhizosphereMSNFLSQLTTSERARLLEELNYMNLEEIRGFCSARAIPYR
Ga0075425_10310152923300006854Populus RhizosphereMPNLLSQLTKDAQARFLEELNYLNLEEIRGFCSDR
Ga0075434_10001562013300006871Populus RhizosphereMPNFLSKLTKGEQTRLLEELNYMNLEEIRGFCVPRGIPYKIVAEYSNGKIRATKDTD
Ga0079217_1046614523300006876Agricultural SoilMSNVLAQLTANERARLLEELNYMNLEEIRGFCLARVIPYRI
Ga0075426_1021044413300006903Populus RhizosphereMSNFLSQLTTSERARLLEELNYMNLEEIRGFCSARAI
Ga0075426_1036829523300006903Populus RhizosphereMSNFLSQLTTSERARLLEELNYMNLEEIRGFCSAR
Ga0075424_10026195633300006904Populus RhizosphereMSNFLLRLTKSEQARLLEELNYMNLEEIRGFCSERGIPYRIVAAYANGKVKAT
Ga0075424_10093934223300006904Populus RhizosphereMSNFLSQLTKSEQARLLEELNYMNLEEIRGFCSERGIPYRIVA
Ga0075424_10133386523300006904Populus RhizosphereMSNFLSQLTKIERARLLEELNYMNLEEIRGFCSARAIPYRI
Ga0075424_10154347813300006904Populus RhizosphereMSNFLSQLTTSERARLLEELNYMNLEEIRGFCSARAIPYRIVAESSN
Ga0075424_10233684613300006904Populus RhizosphereMSNFLSQLTKSEHARLLEELNYMNLEEIRGFCSERGIPYRIVAAYANGKVKAT
Ga0075419_1149264813300006969Populus RhizosphereMSNRLSRLTKSERARLLEELNYMNLEEIRGLCSARAIPYRIVAEYSNGK
Ga0079218_1082502313300007004Agricultural SoilMSNLLSQITKNEQALLLEGLNYMNLEEIRGFCSERGIPYRIVAEYP
Ga0079218_1158478213300007004Agricultural SoilMVNFLSQLTKSEQARLLEELNYMNLEEIRGFCSERGIPYRIVAEYANGK
Ga0075435_10008112013300007076Populus RhizosphereMSNFLSQLTTRERARLLEELNYMNLEEIRGFCSARAIPYRIVAESSNGKV
Ga0075435_10032198713300007076Populus RhizosphereMSNFLSQLTTSERARLLEELNYMNLEEIRGFCSARAIPYRIVAESSNGKV
Ga0075435_10111606113300007076Populus RhizosphereMSNFLSQLTKSEQARLLEELNYMNLEEIRGFCSERGIPYRIVAAY
Ga0066710_10408764223300009012Grasslands SoilMLNFLSQLTKAGQARLLEELNYMNLEEIRDFCAARRIPYKILAGSPNGKVT
Ga0099828_1170020813300009089Vadose Zone SoilMTNLLSQLTKDAQARFLEELNYMNLEEIHGFCSDRG
Ga0105240_1171746113300009093Corn RhizosphereMSMSNFLSQLTTSERARLLEELNYMNLEEIRAFCSARAIPYRI
Ga0105245_1038478313300009098Miscanthus RhizosphereMSMSNFLSQLTTSERARLLEELNYMNVEEIRGFCSARAIPYRIVAESSNGKVKATKD
Ga0066709_10179889713300009137Grasslands SoilMPNFLSQLTKGEQARLLEELNYMNLEEIRGFCSARGIPYKIMAEYPN
Ga0099792_1113521723300009143Vadose Zone SoilMSNFLSRLTKSECARLLEELNYMNLEEIRLLCSERAIPYRIVAEYSNGKVKAT
Ga0114129_1320754023300009147Populus RhizosphereMSNFLSQLTTSERARLLEELNYMNLEEIRGFCSARAIPYRIVAESSNGKVK
Ga0105243_1116060123300009148Miscanthus RhizosphereMPNVLSQLTNSEQARLLDELNYMNLEEIRGFCSARGIPYRIVAESSNGT*
Ga0075423_1049992833300009162Populus RhizosphereMTNFLSKLTKGEQSRLLEELNYMNLEEIRGFCFPRGIPYKIVAEYSNGKIKTTKDTDR
Ga0105242_1304226933300009176Miscanthus RhizosphereLSNFLSQLTASERARLLDELNYMNLEEIRGFCSERGIPYRIMAESADGKVKA
Ga0105248_1194730833300009177Switchgrass RhizosphereMPNFLSQLTKGEQARLLEELNYTNLEEIRGFCSARGIPYRVMVEYPNGKVKAT
Ga0105248_1236801113300009177Switchgrass RhizosphereMPNFLPQLAARERARLLEELNYMNLAEIRSFCSVRGIPYRI
Ga0105248_1240582623300009177Switchgrass RhizosphereMSNFLSQLTVSERARLFEELNYMNLEEIRGFCSVRGIPYRIMAESLDG
Ga0105248_1314648613300009177Switchgrass RhizosphereMSNFLSQLTTSERARLLEALNYMNLEEIRGFCSARAIPYRIVAES
Ga0126372_1010328613300010360Tropical Forest SoilMPNFLSKLNRGERARLLEELNYMNLDEIRGFCVPWGIP
Ga0126378_1215822213300010361Tropical Forest SoilMPDLLSKLSKVERARLLEEMNYLNLEELRGFCSERGIPYKIM
Ga0126377_1103253713300010362Tropical Forest SoilMANFLSQLVKSEQERLLEELNYTNLEEIRSFCSARGIPYRIVAQYADGKV
Ga0126379_1082189823300010366Tropical Forest SoilMSNFLSQLTTSERARLLEELNYMNLEEIRGFCSARAIPY
Ga0134122_1135155813300010400Terrestrial SoilMSNFLSQLTPSARARLLEELNYMNLEEIRGFCSERGIPY
Ga0134122_1140744413300010400Terrestrial SoilMSNFLSRLTKSERARLLEELNYMNLEEIRGFCSERAIP
Ga0134121_1177116323300010401Terrestrial SoilMSNFLSQLTSGEQGRLLEEMNYMNLEEIRAFCAARGIPYK
Ga0134121_1230583423300010401Terrestrial SoilMSNFLSALTNVERTRLFGELNYMNLEEIRGFCSERGIPYRIVAEYPN
Ga0134123_1005662543300010403Terrestrial SoilMPNVLSQLTKSEQARLLEELNYMNLEEIRGFCSARGIPYRIVAESSNGT*
Ga0134123_1035973513300010403Terrestrial SoilMNVLSRLTRAERTRLLEEMNYMNLEEIRGFCSARGIPYRIVAERRNGKVTATKDTD
Ga0137436_109023023300011423SoilLNKSNFLSQLTERERARLLQELNYMNLEEIRGFCSERGIPYRI
Ga0137455_118965923300011429SoilMKRMSNFLSQLTARARARLLEELNYMNLEEIRGFCSVRGIPYRIMAESADGKV
Ga0137423_105600033300011430SoilMPNFLSKLTQGEQARLLEELNYMNLDEIRGFCRPRGIPYKIVAE
Ga0137344_109469513300012159SoilLNKSNFLSQLTASERARLLEELNYMNLEEIRGFCSERGIPYRITAESADGTVKATKDT
Ga0137388_1031984833300012189Vadose Zone SoilMSNFLSRLTASERARLLEELNYMNLEEIRGFCSERGIPYRIMAESADGKVKA
Ga0137399_1166393613300012203Vadose Zone SoilMPNPLSQLTKDAQARFLEELNYLNLEEIRGFCSDRGIPYKILAEYPNGKM
Ga0137387_1087950813300012349Vadose Zone SoilMSNFLSQLSASERARLLKELNYMNLEEIRGFCSERGI
Ga0137366_1039317513300012354Vadose Zone SoilMSNFLSQLTASERARLLKELNYMNLEEIRGFCSERGIPYRIM
Ga0137369_1113609913300012355Vadose Zone SoilMNFLSRLTTSEQARLLEELNYMNLEEIRGFCSERAIPYRIVAEYSN
Ga0137360_1177187223300012361Vadose Zone SoilMSNFLSQLTKGEQARLLEELNYMNLEEIHVFCSERGIPYRIVAEY
Ga0157296_1020965823300012905SoilMPNPLSKLTKGERTRLLEELHYMNLEEIRAFCEGQIA
Ga0137419_1007003613300012925Vadose Zone SoilMSNFLSQLTASERARLLKELNYMNLEEIRGFCSERGIPY
Ga0164301_1160942423300012960SoilMSNFLSQLTASDRARLLEELNYMNLEEIRGFCSERGIPYRIVAESANGKVKAT*
Ga0126369_1033581343300012971Tropical Forest SoilMPNFLSKLTKDEQARLLEELNYMNLDEIRGFCVPRG
Ga0164306_1121830223300012988SoilMPNLLSPLTARERTRLLEELNYMNLEEIRGFCSARGIPYRIVAEYPGGKVKV
Ga0164305_1037023813300012989SoilMSNFLSQLTASERARLLEELNYMNLEEIRGFCSVRGIPYRIMAESAEGKVKATKDTD
Ga0164305_1123510923300012989SoilMPNFLSKLTKGEQARLLEELNYMNLDEIRGFCVPRGIPYRIVA
Ga0163162_1065593923300013306Switchgrass RhizosphereMPNMLLQLTRAEQAQLLEELNYMNIEEIRAFCAARAIPFRIVAEHSNGKVKA
Ga0157375_1205831123300013308Miscanthus RhizosphereMPNPLSKLTKGERTRLLEELNYLNLAEIRGFCSARG
Ga0163163_1026030533300014325Switchgrass RhizosphereMSNLLSQLTKSERARLLEDLNYLNLEEIRDFCSKHG
Ga0163163_1095543033300014325Switchgrass RhizosphereMANFLSQLTKSERARLLEELNYMNLEEIRGFCSERAIPYRIVAEY*
Ga0163163_1210899523300014325Switchgrass RhizosphereMSNFLSQLGKREQARLLEELNYMNLEEIRGFCSTRGIPYRIVAEDANGRVKPTQD
Ga0157380_1033098733300014326Switchgrass RhizosphereMSNFLSQLTTTERARFLEELNYMNLEEIRGFCSVRAIPYRIVAESSNGKVKAT
Ga0157380_1143488913300014326Switchgrass RhizosphereMSNVLAQLTTSERARLLEELNYMNLEEVRGFCSARAIP
Ga0157380_1186399823300014326Switchgrass RhizosphereMPSLLSQLTKGERARLLEEMNYLNLAEIRGFCSARGIPYKILA
Ga0157377_1042974723300014745Miscanthus RhizosphereMSNLLSQLTASARARLLEELNYMNLEEIRGFCSERGIPYRIVVESADG
Ga0173480_1046519413300015200SoilMSNLLSQLSKGERARLLEELNYMNLEEIRGFCSTRGIPYRV
Ga0173480_1058244013300015200SoilMPNMLSQLTRAEQAQLLEELNYMNIEEIRAFCAARAIPFRIVAEH
Ga0137418_1103965813300015241Vadose Zone SoilMSNFLSQLTKSERARLLEELNYMNLEEIRGFCAERGIPYRIVAES
Ga0137409_1018415813300015245Vadose Zone SoilMSNFLSQLTASERARLLKELNYMNLEEIRGFCSERGIPYRIMA
Ga0137409_1029226313300015245Vadose Zone SoilMSNFLSRLTASERARLLEELNYMNLEEIRGFCSERGIPYRIMA
Ga0180071_108355613300015249SoilMSNFLSQLTASERARLLEELNYMNLEEICGFCSERGIPYRIMAESADGKVKATKD
Ga0180085_124667323300015259SoilMSNFLSQLTASARARLLEELNYMNLEEIRGFCSERGIS*
Ga0132258_1383421623300015371Arabidopsis RhizosphereMPNFLSKLTKGEQARLLEELNYMNLDEIRGFCVPRGIPYRIVAEYSSGKVKATKHT
Ga0132258_1386855633300015371Arabidopsis RhizosphereMPNFLAKLTKGEQARLLEELNYMNLEEIRGFCVPRGIPYKIVA
Ga0132256_10175328823300015372Arabidopsis RhizosphereMANFLSQLTKSERARLLEELNYMNLEEIRGFCSER
Ga0132256_10213426023300015372Arabidopsis RhizosphereMPDLLARLTSGEQARFLEELNYLNLEEIRGFCSRR
Ga0132256_10343027023300015372Arabidopsis RhizosphereMWMPNFLSQLTISERDRLLEELNYMNLEEIRGFCSERAIPY
Ga0132257_10320136813300015373Arabidopsis RhizosphereMSNLLSQFTKSERTRLLEELNYMNLEEIRGFCSER
Ga0132257_10430076223300015373Arabidopsis RhizosphereMNVLSRLTRAERTRLLEELNYLNLEEIRGFCSARG
Ga0184610_130724313300017997Groundwater SedimentMSNFLSQLSASERARLLEELNYMNLEEIRGFCSEHGIPYRIVA
Ga0184605_1039664813300018027Groundwater SedimentMSNFLSQLTASERARLLEELNYMNLEEIRGFCSERGIPYRIVAESADGKVKATKD
Ga0184611_102219643300018067Groundwater SedimentMSNFLSQLTKSERARLLEELNYMNLEEIRGFCSERAI
Ga0184629_1026906413300018084Groundwater SedimentMSNLLLQLTASERARLLEELNYMNLEQIRGFCSVRGIPYRIMAES
Ga0184629_1046719813300018084Groundwater SedimentMSNLLSKLTKGEQARLLEELNYMNLAEIRGFCSARGIPHRIVAEYPNGK
Ga0066662_1213008613300018468Grasslands SoilMSNFLSQLTASERARLLEELNYMNLEEIRSFCSERGIPYRIMAESAAGKVKATKDTDR
Ga0066669_1049899733300018482Grasslands SoilMPDFLSQLTKGEQARLLEELNYMNLEEIRGFCSARGIPYKIMAEY
Ga0173481_1036813123300019356SoilMSNFLSQLTIRERERLLEELNYMNLEEIRGFCSERAIPYRIVAECSNGKVKATKDTDR
Ga0173482_1009400213300019361SoilMPNLLSQLTKGERTRLLEELNYMNLEEIRDFCSKRGIP
Ga0193699_1039826123300021363SoilMPNFLSQLTKSEPARLLEELNYLNLEEIRGFCSVRGI
Ga0210409_1136082523300021559SoilMSNSLSQLTASERALLLEELNYMNLEEIRGFCSVRGIPHRIMAESADGKVKATKDTD
Ga0222622_1011737733300022756Groundwater SedimentLNKSNFLSQLTTSERARLLEELNYMNLEEIRGFCSVRGIPYRIMAESADGKVKATK
Ga0222622_1094953013300022756Groundwater SedimentMSNLLSQLTRTEQARLLEEMNYMNLEEIRGFCSERGIPYRIVA
Ga0247686_103698713300024177SoilMSNLLSQLTTSERARLLEELNYMNLEEIRGFCSARAIPYRIVAELSN
Ga0207680_1051499733300025903Switchgrass RhizosphereMPNFLSKLTKGEQARLLEELNYMNLDEIRGFCVPRGI
Ga0207680_1137314913300025903Switchgrass RhizosphereMSNFLSKLTASERARLLEELNYMNLEEIRGFCSEREIPYRIMAESA
Ga0207645_1026416133300025907Miscanthus RhizosphereMPNVLSQLTKSEQARLLEELNYMNLEEIRGFCSARGIPYRI
Ga0207663_1047151423300025916Corn, Switchgrass And Miscanthus RhizosphereMPNSLSQLTKSERARLLDELNYMNLEEIRGFCSERGIPYRIVAESPSGKLKA
Ga0207646_1015858813300025922Corn, Switchgrass And Miscanthus RhizosphereMPNLLSQLNKEKQARLLEDLNYMNMEEIRGFCSARGIPYKILAEYPNGKVKATKDTDR
Ga0207646_1018054233300025922Corn, Switchgrass And Miscanthus RhizosphereMSNFLSPLTKSEQTRLLEELNYMNLAEIRGFCSERGIPYRIVAEYPNGKLKAT
Ga0207646_1147286413300025922Corn, Switchgrass And Miscanthus RhizosphereMSNFLSQLTTRERARLLEELNYMNLEEIRGFCSARAIPYR
Ga0207650_1155726623300025925Switchgrass RhizosphereVKATRRDRNVLSQLDEAGQARLLEELNYMNLEEIRGFCSERGIPYRVMAEHPDG
Ga0207701_1073962713300025930Corn, Switchgrass And Miscanthus RhizosphereMPNFLSKLTQGEQARLLEELNYMNLDEIRGFCRPRGIPYKIVAEYSNGRIKAT
Ga0207709_1130433723300025935Miscanthus RhizosphereMNVLSQLTTAERTRLLEELNYMNLEEIRGFCSARGIPYRIVA
Ga0207670_1088610913300025936Switchgrass RhizosphereMPNLLSKLTESEQARLLEEVNYMNLGEIRGFCSPRGIPYKIVAEYPN
Ga0207669_1159016113300025937Miscanthus RhizosphereMSNLLSRLTKSEQARLLEELNYMNLEEIRGFCSARGIPYRIVAEYPN
Ga0207711_1000623613300025941Switchgrass RhizosphereMSNVLAQLTTSERARLLEELNYMNLEEVRGFCSARAIPFR
Ga0207679_1014688823300025945Corn RhizosphereMSNLLSQLTASARARLLEELNYMNLEEIRGFCTKRGIPYRIVAESADGTVKAT
Ga0207651_1155888023300025960Switchgrass RhizosphereMSNFLSQLTISERERLLEELNYMNLEEIRGFCSERAI
Ga0207677_1201807823300026023Miscanthus RhizosphereLYSILSQLTASERARLLEDLNYMNLEEIRGFCSARGIPYRIMAESANGKVKATKDTD
Ga0207703_1037999823300026035Switchgrass RhizosphereMSNFLSQLTASARARLLEELNYMNLEEIRGFCSARGIPYRIMAESVDGKVKATKDTD
Ga0207708_1037730433300026075Corn, Switchgrass And Miscanthus RhizosphereMSNFLAQLTTSERARLLEELNYMNLEEIRGFCSARGIPYRIVAESSNGT
Ga0207648_1002391413300026089Miscanthus RhizosphereMSNLLSQLTASARARLLEELNYMNLEEIRGFCSERGIPYRIVME
Ga0207675_10123962833300026118Switchgrass RhizosphereMPNFLSKLTQGEQARLLEELNYMNLDEIRGFCRPR
Ga0207675_10253002313300026118Switchgrass RhizosphereMSNFLSQLTASARARLLEELNYMNLEEIRGFCSARGIPYRIMAESADGKVKATKDTDR
Ga0207683_1117697423300026121Miscanthus RhizosphereMSNFLSVLTKSEQARLLEELNYMNLEEIRGFCSERGIPYKIVAEYANGKVKS
Ga0209236_116325123300026298Grasslands SoilMIRMTNLLSQLTKDEQARLLEELNYLNLGEIRGFCSERGIP
Ga0209818_106440413300027637Agricultural SoilMANLLSQLTKSEQARLLEEMNYMNLEEIRGFCSARGIPYKIVAEYPNGRVK
Ga0209814_1039013613300027873Populus RhizosphereVNFLSQLTKSEQARLLEELNYMNLEEIRGFCSEHGIPYR
Ga0209814_1040528023300027873Populus RhizosphereMPNFLSQLTKGEQARLLEELNYMNLEEIRGFCSARGIPYK
Ga0209814_1041935413300027873Populus RhizosphereMSNFLSQLTKSERAQLLGELNYMNLEEIRGFCSERGIPYR
Ga0209590_1025148113300027882Vadose Zone SoilMSNFLSQLTASERARLLEELNYMNLEEIRGFCSERGIPYRIMAESADGTVKATKDT
Ga0209486_1006668123300027886Agricultural SoilMPNLLSQLAKGEQTRLLEELNYMNLEEIHGFCSAHGIPFKVLAEHSDGKVK
Ga0268264_1174769013300028381Switchgrass RhizosphereMPNLLSQLNKDERARLLDELNYMNMEEIRGFCTARGISYRILAEYPNGK
Ga0268264_1180801023300028381Switchgrass RhizosphereMSNFLSQLTKSERARLLEELNYMNLEEIRGFCSERAIPYRIVAEYSNGKVKATKDT
Ga0247828_1103430423300028587SoilMSNFLSQLTISERERLLEELNYMNLEEIRGFCSQRGIPYRIMAESA
Ga0247828_1115490123300028587SoilMANMLSQLTRAEQARLLEELNYMNLEEIRAFCAAHAIPFR
Ga0307305_1030534323300028807SoilMSNFLSQLTKSERARLLGELNYMNLEEIRGFCSERG
Ga0307304_1058291413300028885SoilMSNFLSQLTASERARLLEELNYMNLEEIRGFCSVRGIPYRIMAESADGKVKATKDT
Ga0310888_1038147823300031538SoilMSNFLSQLTASERARLLEDMNYLNLEEIRGFCTQRGIPYRIMAESGDGKVKATK
Ga0310887_1013618933300031547SoilMSNFLSQLTTNERERLLEELNYMNLEEIRGFCSERAIPYRIVAEYS
Ga0310887_1020792413300031547SoilMPNFLAKLTKGEQARLLEELNYMNLEEIRGFCVPR
Ga0310887_1038399813300031547SoilMSNFLSQLTIRERERLLEELNYMNLEEIRGFCSERAIPYRIVAEYSN
Ga0310887_1046705513300031547SoilMPSLLSQLCIGERARLVEELNYLNLAEIRGFCSSRGIPYK
Ga0310887_1079327223300031547SoilMANLLAQLTKRERARLLEELNYMNLEEIRGFCSTRGIPYRIVAEYPDG
Ga0318560_1072836223300031682SoilLSTHRSNLLSQLAKSEQARLLEELNYMNLEEIRGFCSERGIPYRIVAEHSN
Ga0310813_1095244723300031716SoilMPDFLARLTKAVQSQLFEEMNYMNLEEIRGFCSERGIPYRIVMAYPDG
Ga0307469_1104578613300031720Hardwood Forest SoilLSNSLSQLTASERARLLDELNYMNLEEIRGFCSERG
Ga0307405_1109198923300031731RhizosphereMSNFLSQLTTSEQARLLEEVNYLNLEEIRGFCLERGIPYRIVAEYPNG
Ga0307468_10142616723300031740Hardwood Forest SoilMSNFLSQLTASARARLLEELNYMNLEEIRGFCSARGIPYRIMAESADGKVKATK
Ga0306918_1098202013300031744SoilMPNLLSQLTKTERTRLFEELNYMNLEEIQGFCSARGIPFRIIAEYPNGK
Ga0307473_1046844023300031820Hardwood Forest SoilMSNLLSQLTKSEQARLLEELNYMNLEEIRGFCSERGIPYRIVAES
Ga0307413_1014894913300031824RhizosphereMTSMSNFLSQLTKNEQARLLQELNYMNLEEIRGFCSQRG
Ga0307410_1198607813300031852RhizosphereMSNFLSALTKVERAGLLEELNYLNLEEIRGFCSERGIPYRIA
Ga0310904_1073744413300031854SoilMSNFLSQLTISERERLLEELNYMNLEEIRGFCSERAIPYRIVAE
Ga0310904_1133448613300031854SoilMPNLLSVLTKIERTRLLEELNYMNLEEIRVFCSERRIPYRIVAEYPNGKVKK
Ga0310904_1134905313300031854SoilMSNFLSQLTKSERARLLEELNYMNLEEVRGFCSERAIPYRIVAEYSNGKVKATKD
Ga0310892_1029352813300031858SoilMSNFLSQLTIRERERLLEELNYMNLEEIRGFCSERAIPYRIVAE
Ga0310892_1082148713300031858SoilMSNFLSQLTISERERLLEELNYMNLEEIRGFCSERA
Ga0310900_1105660023300031908SoilMNALSQLTKSERVRLLEELNYMNLEEIRGFCAERGIPHRI
Ga0307412_1157088813300031911RhizosphereVPRFLSKLTESEQGRLLEELNYMNLEEIRGFCSVRGIPYRI
Ga0310885_1024813913300031943SoilMSNFLSQLTISERERLLEELNYMNLEEIRGFCSERAIPYRIVAEYSNGKVKA
Ga0310903_1055016823300032000SoilMSNLLSQITKNEQARLLEELNCMNLEEIRGFCSERGIPYRIVAECPNG
Ga0307416_10026308313300032002RhizosphereMTSMSNFLSQLTKNEQARLLQELNYMNLEEIRGFCSQRGIPYRVV
Ga0310906_1089035823300032013SoilMANYLSQLTASERARLLEELNYMNLEEIRGFCLTRAIPYRI
Ga0310899_1014526333300032017SoilMPNFLAKLTKGEQARLLEELNYMNLDEIRGFCFPRGIPYKILAEY
Ga0310890_1138025023300032075SoilMANLLAQLTKRERARLLEELNYMNLEEIRGFCSMRGIPYRIVAEY
Ga0307415_10156273323300032126RhizosphereMPNFLSQLTTSERERLLDELNYMNMEEIRGFCATRGIPYRVMA
Ga0315912_1037592123300032157SoilMSHLLSQLARSERTRLLEEMNYMNLAEIRGFCAKRGIPYRIVAEYPGGKVKATPDT
Ga0307471_10128713123300032180Hardwood Forest SoilMPNFLSKLTKGEQARLLEELNYMNLDEIRGFCFPRGIPYKIVAEYA
Ga0307471_10245959413300032180Hardwood Forest SoilMSNFLSRLTKSEQARLLEELNYMNLEEIRGFCSERGIPYRIVAESSNGKVKATKD
Ga0307471_10420093823300032180Hardwood Forest SoilMPNFLSKLTKGEQARLLEELNYMNLDEIRGFCFPRGIPYRIVAEYSSGK
Ga0247830_1031525933300033551SoilMANLLSQLTKSEQARLLEEMNYMNLEEIRGFCSARGIPYKIVAEYPNGRVKATK
Ga0364933_016931_1606_17253300034150SedimentMANFMAQLTKSEQARLLEELNYMNLAEIRAFCSERGIPYR
Ga0364923_0070211_725_8503300034690SedimentMPNFLSKLNKSEQERLLEELNYMNLDEIRGFCFPRGIPYKIL


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.